0s autopkgtest [15:25:29]: starting date and time: 2024-11-13 15:25:29+0000 0s autopkgtest [15:25:29]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [15:25:29]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9quqokfm/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-prodigy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-29.secgroup --name adt-plucky-s390x-python-prodigy-20241113-152529-juju-7f2275-prod-proposed-migration-environment-20-e6a6d68c-931c-4029-95ff-0327c97ead99 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 100s autopkgtest [15:27:09]: testbed dpkg architecture: s390x 100s autopkgtest [15:27:09]: testbed apt version: 2.9.8 100s autopkgtest [15:27:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 101s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 101s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 101s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.5 kB] 101s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [962 kB] 102s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 102s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [110 kB] 102s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [639 kB] 102s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [17.4 kB] 102s Fetched 1931 kB in 2s (1285 kB/s) 102s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s Calculating upgrade... 104s The following NEW packages will be installed: 104s python3.13-gdbm 104s The following packages will be upgraded: 104s libgnutls30t64 libgpgme11t64 libjson-glib-1.0-0 libjson-glib-1.0-common 104s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 105s 9 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 105s Need to get 1285 kB of archives. 105s After this operation, 103 kB of additional disk space will be used. 105s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB] 105s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls30t64 s390x 3.8.8-2ubuntu1 [950 kB] 105s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 105s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 105s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB] 106s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 106s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-0 s390x 1.10.0+ds-3 [67.5 kB] 106s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libutempter0 s390x 1.2.1-4 [9708 B] 106s Fetched 1285 kB in 1s (1229 kB/s) 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 106s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ... 106s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 106s Setting up python3-minimal (3.12.7-1) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 106s Preparing to unpack .../python3_3.12.7-1_s390x.deb ... 106s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 106s Preparing to unpack .../libpython3-stdlib_3.12.7-1_s390x.deb ... 106s Unpacking libpython3-stdlib:s390x (3.12.7-1) over (3.12.6-0ubuntu1) ... 106s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_s390x.deb ... 106s Unpacking libgnutls30t64:s390x (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 106s Setting up libgnutls30t64:s390x (3.8.8-2ubuntu1) ... 106s Selecting previously unselected package python3.13-gdbm. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 106s Preparing to unpack .../0-python3.13-gdbm_3.13.0-2_s390x.deb ... 106s Unpacking python3.13-gdbm (3.13.0-2) ... 106s Preparing to unpack .../1-python3-gdbm_3.12.7-1_s390x.deb ... 106s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 106s Preparing to unpack .../2-libgpgme11t64_1.23.2-5ubuntu4_s390x.deb ... 106s Unpacking libgpgme11t64:s390x (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 106s Preparing to unpack .../3-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 106s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 106s Preparing to unpack .../4-libjson-glib-1.0-0_1.10.0+ds-3_s390x.deb ... 106s Unpacking libjson-glib-1.0-0:s390x (1.10.0+ds-3) over (1.10.0+ds-2) ... 106s Preparing to unpack .../5-libutempter0_1.2.1-4_s390x.deb ... 106s Unpacking libutempter0:s390x (1.2.1-4) over (1.2.1-3build1) ... 106s Setting up libutempter0:s390x (1.2.1-4) ... 106s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 106s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ... 106s Setting up python3.13-gdbm (3.13.0-2) ... 106s Setting up libpython3-stdlib:s390x (3.12.7-1) ... 106s Setting up python3 (3.12.7-1) ... 106s Setting up libjson-glib-1.0-0:s390x (1.10.0+ds-3) ... 106s Setting up python3-gdbm:s390x (3.12.7-1) ... 106s Processing triggers for man-db (2.12.1-3) ... 107s Processing triggers for libc-bin (2.40-1ubuntu3) ... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 107s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 108s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 108s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 108s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 108s Reading package lists... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s Calculating upgrade... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s autopkgtest [15:27:21]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 112s autopkgtest [15:27:21]: @@@@@@@@@@@@@@@@@@@@ apt-source python-prodigy 116s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (dsc) [2228 B] 116s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (tar) [5709 kB] 116s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (diff) [1956 B] 116s gpgv: Signature made Mon Oct 7 11:27:29 2024 UTC 116s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 116s gpgv: issuer "merkys@debian.org" 116s gpgv: Can't check signature: No public key 116s dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.3-1.dsc: no acceptable signature found 116s autopkgtest [15:27:25]: testing package python-prodigy version 2.2.3-1 116s autopkgtest [15:27:25]: build not needed 117s autopkgtest [15:27:26]: test pybuild-autopkgtest: preparing testbed 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Starting pkgProblemResolver with broken count: 0 118s Starting 2 pkgProblemResolver with broken count: 0 118s Done 119s The following additional packages will be installed: 119s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 119s cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu debhelper debugedit dh-autoreconf 119s dh-python dh-strip-nondeterminism dwz fontconfig-config fonts-dejavu-core 119s fonts-dejavu-mono fonts-urw-base35 g++ g++-14 g++-14-s390x-linux-gnu 119s g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu 119s gettext help2man intltool-debian libarchive-zip-perl libasan8 libblas3 119s libcairo2 libcc1-0 libdebhelper-perl libdeflate0 119s libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 119s libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 119s libimagequant0 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 119s liblcms2-2 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 119s libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool 119s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 119s libxrender1 m4 po-debconf pybuild-plugin-autopkgtest 119s pybuild-plugin-pyproject python3-all python3-biopython python3-build 119s python3-cairo python3-freesasa python3-freetype python3-installer 119s python3-numpy python3-packaging python3-pil python3-poetry-core 119s python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo 119s python3-toml python3-wheel python3.13 python3.13-minimal sgml-base 119s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 119s Suggested packages: 119s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 119s cpp-14-doc dh-make flit fonts-freefont-otf | fonts-freefont-ttf 119s fonts-texgyre gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc 119s gdb-s390x-linux-gnu gettext-doc libasprintf-dev libgettextpo-dev 119s liblcms2-utils libstdc++-14-doc libtool-doc gfortran | fortran95-compiler 119s gcj-jdk m4-doc libmail-box-perl python3-tk bwa clustalo clustalw dialign 119s dssp emboss fasttree mafft muscle3 phylip phyml prank probcons 119s python3-mysqldb python3-matplotlib python3-mmtf python3-rdflib 119s python3-psycopg2 python3-scipy raxml samtools t-coffee wise python3-pip 119s python3-venv python-build-doc python-freesasa-doc python-installer-doc 119s gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc 119s pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel 119s rl-renderpm python3.13-venv python3.13-doc binfmt-support sgml-base-doc 119s Recommended packages: 119s libarchive-cpio-perl libltdl-dev libmail-sendmail-perl python-biopython-doc 119s ncbi-blast+ python3-olefile fonts-dejavu-extra 119s The following NEW packages will be installed: 119s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 119s cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu debhelper debugedit 119s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 119s fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ g++-14 119s g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu 119s gcc-s390x-linux-gnu gettext help2man intltool-debian libarchive-zip-perl 119s libasan8 libblas3 libcairo2 libcc1-0 libdebhelper-perl libdeflate0 119s libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 119s libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 119s libimagequant0 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 119s liblcms2-2 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 119s libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool 119s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 119s libxrender1 m4 po-debconf pybuild-plugin-autopkgtest 119s pybuild-plugin-pyproject python3-all python3-biopython python3-build 119s python3-cairo python3-freesasa python3-freetype python3-installer 119s python3-numpy python3-packaging python3-pil python3-poetry-core 119s python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo 119s python3-toml python3-wheel python3.13 python3.13-minimal sgml-base 119s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 119s 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. 119s Need to get 88.0 MB/88.0 MB of archives. 119s After this operation, 278 MB of additional disk space will be used. 119s Get:1 /tmp/autopkgtest.CwnWBR/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [824 B] 119s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 119s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 120s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x sgml-base all 1.31 [11.4 kB] 120s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x m4 s390x 1.4.19-4build1 [256 kB] 120s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x autoconf all 2.72-3 [382 kB] 120s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x autotools-dev all 20220109.1 [44.9 kB] 120s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x automake all 1:1.16.5-1.3ubuntu1 [558 kB] 120s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x autopoint all 0.22.5-2 [616 kB] 120s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 120s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 120s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [9570 kB] 121s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-8ubuntu1 [1026 B] 121s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B] 121s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB] 121s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-8ubuntu1 [50.6 kB] 121s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-8ubuntu1 [151 kB] 121s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-8ubuntu1 [30.9 kB] 121s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-8ubuntu1 [2963 kB] 121s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-8ubuntu1 [1184 kB] 122s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-8ubuntu1 [1037 kB] 122s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [18.7 MB] 122s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-8ubuntu1 [518 kB] 122s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B] 122s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B] 122s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-8ubuntu1 [2608 kB] 122s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [11.0 MB] 123s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-8ubuntu1 [19.9 kB] 123s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B] 123s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B] 123s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 123s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 123s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libtool all 2.4.7-7build1 [166 kB] 123s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x dh-autoreconf all 20 [16.1 kB] 123s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] 123s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 123s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x dh-strip-nondeterminism all 1.14.0-1 [5058 B] 123s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x debugedit s390x 1:5.1-1 [49.9 kB] 123s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x dwz s390x 0.15-1build6 [122 kB] 123s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x gettext s390x 0.22.5-2 [996 kB] 123s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] 123s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x po-debconf all 1.0.21+nmu1 [233 kB] 123s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x debhelper all 13.20ubuntu1 [893 kB] 123s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x dh-python all 6.20241024 [112 kB] 123s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 123s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 123s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 123s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 123s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 123s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 123s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 123s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 123s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 123s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x help2man s390x 1.49.3 [201 kB] 123s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 123s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 124s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 124s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 124s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 124s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 124s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 124s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 124s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 124s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 124s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.0.1-1 [536 kB] 124s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 124s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB] 124s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 124s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 124s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 124s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 124s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.1-1build1 [16.2 kB] 124s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 124s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 124s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 124s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 124s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB] 124s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB] 124s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 124s Get:80 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB] 124s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 124s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-toml all 0.10.2-1 [16.5 kB] 124s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-wheel all 0.44.0-1 [54.2 kB] 124s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-build all 1.2.2-1 [31.0 kB] 124s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 124s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x pybuild-plugin-pyproject all 6.20241024 [1728 B] 124s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 124s Get:88 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B] 124s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 124s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu1 [208 kB] 124s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu1 [492 kB] 124s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cairo s390x 1.26.1-2 [119 kB] 124s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 124s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 124s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-reportlab all 4.2.5-1 [1107 kB] 124s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x xml-core all 0.19 [20.3 kB] 124s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 124s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-biopython s390x 1.84+dfsg-4 [1721 kB] 124s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-freesasa s390x 2.1.0-3build3 [172 kB] 124s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-poetry-core all 1.9.0-2 [203 kB] 124s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-prodigy all 2.2.3-1 [15.7 kB] 125s Fetched 88.0 MB in 6s (15.6 MB/s) 125s Selecting previously unselected package libpython3.13-minimal:s390x. 125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 125s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_s390x.deb ... 125s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 125s Selecting previously unselected package python3.13-minimal. 125s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_s390x.deb ... 125s Unpacking python3.13-minimal (3.13.0-2) ... 125s Selecting previously unselected package sgml-base. 125s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 125s Unpacking sgml-base (1.31) ... 125s Selecting previously unselected package m4. 125s Preparing to unpack .../003-m4_1.4.19-4build1_s390x.deb ... 125s Unpacking m4 (1.4.19-4build1) ... 125s Selecting previously unselected package autoconf. 125s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 125s Unpacking autoconf (2.72-3) ... 125s Selecting previously unselected package autotools-dev. 125s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 125s Unpacking autotools-dev (20220109.1) ... 125s Selecting previously unselected package automake. 125s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 125s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 125s Selecting previously unselected package autopoint. 125s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 125s Unpacking autopoint (0.22.5-2) ... 125s Selecting previously unselected package libisl23:s390x. 125s Preparing to unpack .../008-libisl23_0.27-1_s390x.deb ... 125s Unpacking libisl23:s390x (0.27-1) ... 125s Selecting previously unselected package libmpc3:s390x. 125s Preparing to unpack .../009-libmpc3_1.3.1-1build2_s390x.deb ... 125s Unpacking libmpc3:s390x (1.3.1-1build2) ... 125s Selecting previously unselected package cpp-14-s390x-linux-gnu. 125s Preparing to unpack .../010-cpp-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking cpp-14-s390x-linux-gnu (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package cpp-14. 125s Preparing to unpack .../011-cpp-14_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package cpp-s390x-linux-gnu. 125s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package cpp. 125s Preparing to unpack .../013-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking cpp (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package libcc1-0:s390x. 125s Preparing to unpack .../014-libcc1-0_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libcc1-0:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package libgomp1:s390x. 125s Preparing to unpack .../015-libgomp1_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libgomp1:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package libitm1:s390x. 125s Preparing to unpack .../016-libitm1_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libitm1:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package libasan8:s390x. 125s Preparing to unpack .../017-libasan8_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libasan8:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package libubsan1:s390x. 125s Preparing to unpack .../018-libubsan1_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libubsan1:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package libgcc-14-dev:s390x. 125s Preparing to unpack .../019-libgcc-14-dev_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libgcc-14-dev:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package gcc-14-s390x-linux-gnu. 125s Preparing to unpack .../020-gcc-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking gcc-14-s390x-linux-gnu (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package gcc-14. 125s Preparing to unpack .../021-gcc-14_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package gcc-s390x-linux-gnu. 125s Preparing to unpack .../022-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package gcc. 125s Preparing to unpack .../023-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking gcc (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package libstdc++-14-dev:s390x. 125s Preparing to unpack .../024-libstdc++-14-dev_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libstdc++-14-dev:s390x (14.2.0-8ubuntu1) ... 126s Selecting previously unselected package g++-14-s390x-linux-gnu. 126s Preparing to unpack .../025-g++-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ... 126s Unpacking g++-14-s390x-linux-gnu (14.2.0-8ubuntu1) ... 126s Selecting previously unselected package g++-14. 126s Preparing to unpack .../026-g++-14_14.2.0-8ubuntu1_s390x.deb ... 126s Unpacking g++-14 (14.2.0-8ubuntu1) ... 126s Selecting previously unselected package g++-s390x-linux-gnu. 126s Preparing to unpack .../027-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 126s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 126s Selecting previously unselected package g++. 126s Preparing to unpack .../028-g++_4%3a14.1.0-2ubuntu1_s390x.deb ... 126s Unpacking g++ (4:14.1.0-2ubuntu1) ... 126s Selecting previously unselected package build-essential. 126s Preparing to unpack .../029-build-essential_12.10ubuntu1_s390x.deb ... 126s Unpacking build-essential (12.10ubuntu1) ... 126s Selecting previously unselected package libdebhelper-perl. 126s Preparing to unpack .../030-libdebhelper-perl_13.20ubuntu1_all.deb ... 126s Unpacking libdebhelper-perl (13.20ubuntu1) ... 126s Selecting previously unselected package libtool. 126s Preparing to unpack .../031-libtool_2.4.7-7build1_all.deb ... 126s Unpacking libtool (2.4.7-7build1) ... 126s Selecting previously unselected package dh-autoreconf. 126s Preparing to unpack .../032-dh-autoreconf_20_all.deb ... 126s Unpacking dh-autoreconf (20) ... 126s Selecting previously unselected package libarchive-zip-perl. 126s Preparing to unpack .../033-libarchive-zip-perl_1.68-1_all.deb ... 126s Unpacking libarchive-zip-perl (1.68-1) ... 126s Selecting previously unselected package libfile-stripnondeterminism-perl. 126s Preparing to unpack .../034-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 126s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 126s Selecting previously unselected package dh-strip-nondeterminism. 126s Preparing to unpack .../035-dh-strip-nondeterminism_1.14.0-1_all.deb ... 126s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 126s Selecting previously unselected package debugedit. 126s Preparing to unpack .../036-debugedit_1%3a5.1-1_s390x.deb ... 126s Unpacking debugedit (1:5.1-1) ... 126s Selecting previously unselected package dwz. 126s Preparing to unpack .../037-dwz_0.15-1build6_s390x.deb ... 126s Unpacking dwz (0.15-1build6) ... 126s Selecting previously unselected package gettext. 126s Preparing to unpack .../038-gettext_0.22.5-2_s390x.deb ... 126s Unpacking gettext (0.22.5-2) ... 126s Selecting previously unselected package intltool-debian. 126s Preparing to unpack .../039-intltool-debian_0.35.0+20060710.6_all.deb ... 126s Unpacking intltool-debian (0.35.0+20060710.6) ... 126s Selecting previously unselected package po-debconf. 126s Preparing to unpack .../040-po-debconf_1.0.21+nmu1_all.deb ... 126s Unpacking po-debconf (1.0.21+nmu1) ... 126s Selecting previously unselected package debhelper. 126s Preparing to unpack .../041-debhelper_13.20ubuntu1_all.deb ... 126s Unpacking debhelper (13.20ubuntu1) ... 126s Selecting previously unselected package dh-python. 126s Preparing to unpack .../042-dh-python_6.20241024_all.deb ... 126s Unpacking dh-python (6.20241024) ... 126s Selecting previously unselected package fonts-dejavu-mono. 126s Preparing to unpack .../043-fonts-dejavu-mono_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-mono (2.37-8) ... 126s Selecting previously unselected package fonts-dejavu-core. 126s Preparing to unpack .../044-fonts-dejavu-core_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-core (2.37-8) ... 126s Selecting previously unselected package libfontenc1:s390x. 126s Preparing to unpack .../045-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 126s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 126s Selecting previously unselected package libfreetype6:s390x. 126s Preparing to unpack .../046-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 126s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 126s Selecting previously unselected package x11-common. 126s Preparing to unpack .../047-x11-common_1%3a7.7+23ubuntu3_all.deb ... 126s Unpacking x11-common (1:7.7+23ubuntu3) ... 126s Selecting previously unselected package xfonts-encodings. 126s Preparing to unpack .../048-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 126s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 126s Selecting previously unselected package xfonts-utils. 126s Preparing to unpack .../049-xfonts-utils_1%3a7.7+7_s390x.deb ... 126s Unpacking xfonts-utils (1:7.7+7) ... 126s Selecting previously unselected package fonts-urw-base35. 126s Preparing to unpack .../050-fonts-urw-base35_20200910-8_all.deb ... 126s Unpacking fonts-urw-base35 (20200910-8) ... 127s Selecting previously unselected package fontconfig-config. 127s Preparing to unpack .../051-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 127s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 127s Selecting previously unselected package help2man. 127s Preparing to unpack .../052-help2man_1.49.3_s390x.deb ... 127s Unpacking help2man (1.49.3) ... 127s Selecting previously unselected package libblas3:s390x. 127s Preparing to unpack .../053-libblas3_3.12.0-3build2_s390x.deb ... 127s Unpacking libblas3:s390x (3.12.0-3build2) ... 127s Selecting previously unselected package libfontconfig1:s390x. 127s Preparing to unpack .../054-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 127s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 127s Selecting previously unselected package libpixman-1-0:s390x. 127s Preparing to unpack .../055-libpixman-1-0_0.44.0-3_s390x.deb ... 127s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 127s Selecting previously unselected package libxcb-render0:s390x. 127s Preparing to unpack .../056-libxcb-render0_1.17.0-2_s390x.deb ... 127s Unpacking libxcb-render0:s390x (1.17.0-2) ... 127s Selecting previously unselected package libxcb-shm0:s390x. 127s Preparing to unpack .../057-libxcb-shm0_1.17.0-2_s390x.deb ... 127s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 127s Selecting previously unselected package libxrender1:s390x. 127s Preparing to unpack .../058-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 127s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 127s Selecting previously unselected package libcairo2:s390x. 127s Preparing to unpack .../059-libcairo2_1.18.2-2_s390x.deb ... 127s Unpacking libcairo2:s390x (1.18.2-2) ... 127s Selecting previously unselected package libdeflate0:s390x. 127s Preparing to unpack .../060-libdeflate0_1.22-1_s390x.deb ... 127s Unpacking libdeflate0:s390x (1.22-1) ... 127s Selecting previously unselected package libgfortran5:s390x. 127s Preparing to unpack .../061-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 127s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 127s Selecting previously unselected package libgraphite2-3:s390x. 127s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 127s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 127s Selecting previously unselected package libharfbuzz0b:s390x. 127s Preparing to unpack .../063-libharfbuzz0b_10.0.1-1_s390x.deb ... 127s Unpacking libharfbuzz0b:s390x (10.0.1-1) ... 127s Selecting previously unselected package libimagequant0:s390x. 127s Preparing to unpack .../064-libimagequant0_2.18.0-1build1_s390x.deb ... 127s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 127s Selecting previously unselected package libjpeg-turbo8:s390x. 127s Preparing to unpack .../065-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ... 127s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 127s Selecting previously unselected package libjpeg8:s390x. 127s Preparing to unpack .../066-libjpeg8_8c-2ubuntu11_s390x.deb ... 127s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 127s Selecting previously unselected package liblapack3:s390x. 127s Preparing to unpack .../067-liblapack3_3.12.0-3build2_s390x.deb ... 127s Unpacking liblapack3:s390x (3.12.0-3build2) ... 127s Selecting previously unselected package liblcms2-2:s390x. 127s Preparing to unpack .../068-liblcms2-2_2.16-2_s390x.deb ... 127s Unpacking liblcms2-2:s390x (2.16-2) ... 127s Selecting previously unselected package libpython3.13-stdlib:s390x. 127s Preparing to unpack .../069-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 127s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 127s Selecting previously unselected package libraqm0:s390x. 127s Preparing to unpack .../070-libraqm0_0.10.1-1build1_s390x.deb ... 127s Unpacking libraqm0:s390x (0.10.1-1build1) ... 127s Selecting previously unselected package libsharpyuv0:s390x. 127s Preparing to unpack .../071-libsharpyuv0_1.4.0-0.1_s390x.deb ... 127s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package libjbig0:s390x. 127s Preparing to unpack .../072-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 127s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 127s Selecting previously unselected package libwebp7:s390x. 127s Preparing to unpack .../073-libwebp7_1.4.0-0.1_s390x.deb ... 127s Unpacking libwebp7:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package libtiff6:s390x. 127s Preparing to unpack .../074-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 127s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 127s Selecting previously unselected package libwebpdemux2:s390x. 127s Preparing to unpack .../075-libwebpdemux2_1.4.0-0.1_s390x.deb ... 127s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package libwebpmux3:s390x. 127s Preparing to unpack .../076-libwebpmux3_1.4.0-0.1_s390x.deb ... 127s Unpacking libwebpmux3:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package pybuild-plugin-autopkgtest. 127s Preparing to unpack .../077-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 127s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 127s Selecting previously unselected package python3-packaging. 127s Preparing to unpack .../078-python3-packaging_24.1-1_all.deb ... 127s Unpacking python3-packaging (24.1-1) ... 127s Selecting previously unselected package python3-pyproject-hooks. 127s Preparing to unpack .../079-python3-pyproject-hooks_1.2.0-1_all.deb ... 127s Unpacking python3-pyproject-hooks (1.2.0-1) ... 127s Selecting previously unselected package python3-toml. 127s Preparing to unpack .../080-python3-toml_0.10.2-1_all.deb ... 127s Unpacking python3-toml (0.10.2-1) ... 127s Selecting previously unselected package python3-wheel. 127s Preparing to unpack .../081-python3-wheel_0.44.0-1_all.deb ... 127s Unpacking python3-wheel (0.44.0-1) ... 127s Selecting previously unselected package python3-build. 127s Preparing to unpack .../082-python3-build_1.2.2-1_all.deb ... 127s Unpacking python3-build (1.2.2-1) ... 127s Selecting previously unselected package python3-installer. 127s Preparing to unpack .../083-python3-installer_0.7.0+dfsg1-3_all.deb ... 127s Unpacking python3-installer (0.7.0+dfsg1-3) ... 127s Selecting previously unselected package pybuild-plugin-pyproject. 127s Preparing to unpack .../084-pybuild-plugin-pyproject_6.20241024_all.deb ... 127s Unpacking pybuild-plugin-pyproject (6.20241024) ... 127s Selecting previously unselected package python3.13. 127s Preparing to unpack .../085-python3.13_3.13.0-2_s390x.deb ... 127s Unpacking python3.13 (3.13.0-2) ... 127s Selecting previously unselected package python3-all. 127s Preparing to unpack .../086-python3-all_3.12.7-1_s390x.deb ... 127s Unpacking python3-all (3.12.7-1) ... 127s Selecting previously unselected package python3-numpy. 127s Preparing to unpack .../087-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 127s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 127s Selecting previously unselected package libopenjp2-7:s390x. 127s Preparing to unpack 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... 138s Setting up w3c-sgml-lib (1.3-3) ... 158s Setting up python3-biopython (1.84+dfsg-4) ... 160s Setting up python3-prodigy (2.2.3-1) ... 160s Setting up autopkgtest-satdep (0) ... 163s (Reading database ... 62189 files and directories currently installed.) 163s Removing autopkgtest-satdep (0) ... 163s autopkgtest [15:28:12]: test pybuild-autopkgtest: pybuild-autopkgtest 163s autopkgtest [15:28:12]: test pybuild-autopkgtest: [----------------------- 164s pybuild-autopkgtest 164s I: pybuild base:311: cd /tmp/autopkgtest.CwnWBR/autopkgtest_tmp/build; python3.13 -m unittest discover -v 164s tests.test_prodigy (unittest.loader._FailedTest.tests.test_prodigy) ... ERROR 164s 164s ====================================================================== 164s ERROR: tests.test_prodigy (unittest.loader._FailedTest.tests.test_prodigy) 164s ---------------------------------------------------------------------- 164s ImportError: Failed to import test module: tests.test_prodigy 164s Traceback (most recent call last): 164s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 164s from . import multiarray 164s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 164s from . import overrides 164s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 164s from numpy.core._multiarray_umath import ( 164s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 164s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 164s 164s During handling of the above exception, another exception occurred: 164s 164s Traceback (most recent call last): 164s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 164s from numpy.__config__ import show as show_config 164s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 164s from numpy.core._multiarray_umath import ( 164s ...<3 lines>... 164s ) 164s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 164s raise ImportError(msg) 164s ImportError: 164s 164s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 164s 164s Importing the numpy C-extensions failed. This error can happen for 164s many reasons, often due to issues with your setup or how NumPy was 164s installed. 164s 164s We have compiled some common reasons and troubleshooting tips at: 164s 164s https://numpy.org/devdocs/user/troubleshooting-importerror.html 164s 164s Please note and check the following: 164s 164s * The Python version is: Python3.13 from "/usr/bin/python3.13" 164s * The NumPy version is: "1.26.4" 164s 164s and make sure that they are the versions you expect. 164s Please carefully study the documentation linked above for further help. 164s 164s Original error was: No module named 'numpy.core._multiarray_umath' 164s 164s 164s The above exception was the direct cause of the following exception: 164s 164s Traceback (most recent call last): 164s File "/usr/lib/python3.13/unittest/loader.py", line 396, in _find_test_path 164s module = self._get_module_from_name(name) 164s File "/usr/lib/python3.13/unittest/loader.py", line 339, in _get_module_from_name 164s __import__(name) 164s ~~~~~~~~~~^^^^^^ 164s File "/tmp/autopkgtest.CwnWBR/autopkgtest_tmp/build/tests/test_prodigy.py", line 17, in 164s import numpy as np 164s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 164s raise ImportError(msg) from e 164s ImportError: Error importing numpy: you should not try to import numpy from 164s its source directory; please exit the numpy source tree, and relaunch 164s your python interpreter from there. 164s 164s 164s ---------------------------------------------------------------------- 164s Ran 1 test in 0.000s 164s 164s FAILED (errors=1) 164s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.CwnWBR/autopkgtest_tmp/build; python3.13 -m unittest discover -v 164s I: pybuild base:311: cd /tmp/autopkgtest.CwnWBR/autopkgtest_tmp/build; python3.12 -m unittest discover -v 164s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) 184s Test method to compare prediction for 80 dataset cases with ... ok 184s 184s ---------------------------------------------------------------------- 184s Ran 1 test in 20.069s 184s 184s OK 184s pybuild-autopkgtest: error: pybuild --autopkgtest -i python{version} -p "3.13 3.12" returned exit code 13 184s make: *** [/tmp/erRKkta18B/run:4: pybuild-autopkgtest] Error 25 184s pybuild-autopkgtest: error: /tmp/erRKkta18B/run pybuild-autopkgtest returned exit code 2 184s Deltas: 184s ba_val max: 1.03% 184s ba_val mean: 0.29% 184s nis_a max: 0.53% 184s nis_a mean: 0.02% 184s nis_c max: 0.44% 184s nis_c mean: 0.02% 185s autopkgtest [15:28:34]: test pybuild-autopkgtest: -----------------------] 185s autopkgtest [15:28:34]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 185s pybuild-autopkgtest FAIL non-zero exit status 25 185s autopkgtest [15:28:34]: @@@@@@@@@@@@@@@@@@@@ summary 185s pybuild-autopkgtest FAIL non-zero exit status 25 197s nova [W] Using flock in prodstack6-s390x 197s flock: timeout while waiting to get lock 197s Creating nova instance adt-plucky-s390x-python-prodigy-20241113-152529-juju-7f2275-prod-proposed-migration-environment-20-e6a6d68c-931c-4029-95ff-0327c97ead99 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)...