0s autopkgtest [19:59:46]: starting date and time: 2024-11-15 19:59:46+0000 0s autopkgtest [19:59:46]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 0s autopkgtest [19:59:46]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ciorttha/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python-pomegranate --apt-upgrade python-pomegranate --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python-pomegranate/0.14.8-7 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-19.secgroup --name adt-plucky-s390x-python-pomegranate-20241115-195946-juju-7f2275-prod-proposed-migration-environment-2-a23b9803-f907-426b-ad89-7a0087956646 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 104s autopkgtest [20:01:30]: testbed dpkg architecture: s390x 104s autopkgtest [20:01:30]: testbed apt version: 2.9.8 104s autopkgtest [20:01:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup 105s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1043 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [92.2 kB] 106s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 106s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [150 kB] 106s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [747 kB] 106s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4940 B] 106s Fetched 2133 kB in 1s (2464 kB/s) 106s Reading package lists... 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Calculating upgrade... 108s The following NEW packages will be installed: 108s libassuan9 108s The following packages will be upgraded: 108s libgpgme11t64 libseccomp2 python3-cffi-backend python3-markupsafe 109s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 109s Need to get 352 kB of archives. 109s After this operation, 352 kB of additional disk space will be used. 109s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libseccomp2 s390x 2.5.5-1ubuntu5 [52.1 kB] 109s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cffi-backend s390x 1.17.1-2build1 [91.3 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libassuan9 s390x 3.0.1-2 [41.3 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.24.0-2ubuntu1 [154 kB] 109s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3-markupsafe s390x 2.1.5-1build3 [12.9 kB] 109s Fetched 352 kB in 0s (765 kB/s) 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 109s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu5_s390x.deb ... 109s Unpacking libseccomp2:s390x (2.5.5-1ubuntu5) over (2.5.5-1ubuntu4) ... 109s Setting up libseccomp2:s390x (2.5.5-1ubuntu5) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 109s Preparing to unpack .../python3-cffi-backend_1.17.1-2build1_s390x.deb ... 109s Unpacking python3-cffi-backend:s390x (1.17.1-2build1) over (1.17.1-2) ... 109s Selecting previously unselected package libassuan9:s390x. 109s Preparing to unpack .../libassuan9_3.0.1-2_s390x.deb ... 109s Unpacking libassuan9:s390x (3.0.1-2) ... 109s Preparing to unpack .../libgpgme11t64_1.24.0-2ubuntu1_s390x.deb ... 109s Unpacking libgpgme11t64:s390x (1.24.0-2ubuntu1) over (1.23.2-5ubuntu4) ... 109s Preparing to unpack .../python3-markupsafe_2.1.5-1build3_s390x.deb ... 109s Unpacking python3-markupsafe (2.1.5-1build3) over (2.1.5-1build2) ... 109s Setting up python3-markupsafe (2.1.5-1build3) ... 110s Setting up libassuan9:s390x (3.0.1-2) ... 110s Setting up libgpgme11t64:s390x (1.24.0-2ubuntu1) ... 110s Setting up python3-cffi-backend:s390x (1.17.1-2build1) ... 110s Processing triggers for libc-bin (2.40-1ubuntu3) ... 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 110s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 111s Reading package lists... 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 112s Calculating upgrade... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s autopkgtest [20:01:41]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 115s autopkgtest [20:01:41]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pomegranate 119s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (dsc) [2729 B] 119s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (tar) [27.3 MB] 119s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (diff) [40.4 kB] 119s gpgv: Signature made Fri Nov 15 12:15:15 2024 UTC 119s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 119s gpgv: Can't check signature: No public key 119s dpkg-source: warning: cannot verify inline signature for ./python-pomegranate_0.14.8-7.dsc: no acceptable signature found 119s autopkgtest [20:01:45]: testing package python-pomegranate version 0.14.8-7 120s autopkgtest [20:01:46]: build not needed 121s autopkgtest [20:01:47]: test run-tests: preparing testbed 123s Reading package lists... 123s Building dependency tree... 123s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 123s The following additional packages will be installed: 123s fonts-font-awesome fonts-lato libblas3 libgfortran5 libjs-jquery 123s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 123s python-pomegranate-doc python3-all python3-dateutil python3-decorator 123s python3-iniconfig python3-joblib python3-networkx python3-numpy 123s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 123s python3-pomegranate python3-pytest python3-scipy python3-six python3-tz 123s sphinx-rtd-theme-common 123s Suggested packages: 123s python-joblib-doc python3-gdal python3-matplotlib python3-pydot 123s python3-pygraphviz gcc gfortran python-numpy-doc python3-dev 123s python-pandas-doc python3-statsmodels python-scipy-doc 123s Recommended packages: 123s javascript-common python3-simplejson python3-psutil python3-matplotlib 123s python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-bs4 123s python3-html5lib python3-lxml python3-tables g++ | c++-compiler python3-pil 123s The following NEW packages will be installed: 123s autopkgtest-satdep fonts-font-awesome fonts-lato libblas3 libgfortran5 123s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 123s python-pomegranate-doc python3-all python3-dateutil python3-decorator 123s python3-iniconfig python3-joblib python3-networkx python3-numpy 123s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 123s python3-pomegranate python3-pytest python3-scipy python3-six python3-tz 123s sphinx-rtd-theme-common 123s 0 upgraded, 28 newly installed, 0 to remove and 0 not upgraded. 123s Need to get 60.1 MB/60.1 MB of archives. 123s After this operation, 305 MB of additional disk space will be used. 123s Get:1 /tmp/autopkgtest.HRi1VQ/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [756 B] 124s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-lato all 2.015-1 [2781 kB] 124s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 124s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 124s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 124s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 124s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 124s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-sphinxdoc all 7.4.7-4 [158 kB] 124s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 124s Get:10 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 124s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB] 124s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python-pomegranate-doc all 0.14.8-7 [5463 kB] 124s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all s390x 3.12.6-0ubuntu1 [890 B] 124s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x python3-six all 1.16.0-7 [13.1 kB] 124s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-2 [80.3 kB] 124s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 124s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 124s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.3.2-5 [206 kB] 124s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 125s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 125s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB] 125s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2024.1-2 [31.4 kB] 125s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas-lib s390x 2.2.3+dfsg-5 [4938 kB] 125s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas all 2.2.3+dfsg-5 [3112 kB] 125s Get:25 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 125s Get:26 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5 [17.5 MB] 126s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python3-pomegranate s390x 0.14.8-7 [4072 kB] 126s Get:28 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 126s Fetched 60.1 MB in 2s (26.7 MB/s) 126s Selecting previously unselected package fonts-lato. 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 126s Preparing to unpack .../00-fonts-lato_2.015-1_all.deb ... 126s Unpacking fonts-lato (2.015-1) ... 126s Selecting previously unselected package fonts-font-awesome. 126s Preparing to unpack .../01-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 126s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 126s Selecting previously unselected package libblas3:s390x. 126s Preparing to unpack .../02-libblas3_3.12.0-3build2_s390x.deb ... 126s Unpacking libblas3:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package libgfortran5:s390x. 126s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 126s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 126s Selecting previously unselected package libjs-jquery. 126s Preparing to unpack .../04-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 126s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 126s Selecting previously unselected package libjs-underscore. 126s Preparing to unpack .../05-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 126s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 126s Selecting previously unselected package libjs-sphinxdoc. 126s Preparing to unpack .../06-libjs-sphinxdoc_7.4.7-4_all.deb ... 126s Unpacking libjs-sphinxdoc (7.4.7-4) ... 126s Selecting previously unselected package liblapack3:s390x. 126s Preparing to unpack .../07-liblapack3_3.12.0-3build2_s390x.deb ... 126s Unpacking liblapack3:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package liblbfgsb0:s390x. 126s Preparing to unpack .../08-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 126s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 126s Selecting previously unselected package sphinx-rtd-theme-common. 126s Preparing to unpack .../09-sphinx-rtd-theme-common_3.0.1+dfsg-1_all.deb ... 126s Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 126s Selecting previously unselected package python-pomegranate-doc. 126s Preparing to unpack .../10-python-pomegranate-doc_0.14.8-7_all.deb ... 126s Unpacking python-pomegranate-doc (0.14.8-7) ... 126s Selecting previously unselected package python3-all. 126s Preparing to unpack .../11-python3-all_3.12.6-0ubuntu1_s390x.deb ... 126s Unpacking python3-all (3.12.6-0ubuntu1) ... 126s Selecting previously unselected package python3-six. 126s Preparing to unpack .../12-python3-six_1.16.0-7_all.deb ... 126s Unpacking python3-six (1.16.0-7) ... 126s Selecting previously unselected package python3-dateutil. 126s Preparing to unpack .../13-python3-dateutil_2.9.0-2_all.deb ... 126s Unpacking python3-dateutil (2.9.0-2) ... 126s Selecting previously unselected package python3-decorator. 126s Preparing to unpack .../14-python3-decorator_5.1.1-5_all.deb ... 126s Unpacking python3-decorator (5.1.1-5) ... 126s Selecting previously unselected package python3-iniconfig. 126s Preparing to unpack .../15-python3-iniconfig_1.1.1-2_all.deb ... 126s Unpacking python3-iniconfig (1.1.1-2) ... 126s Selecting previously unselected package python3-joblib. 126s Preparing to unpack .../16-python3-joblib_1.3.2-5_all.deb ... 126s Unpacking python3-joblib (1.3.2-5) ... 126s Selecting previously unselected package python3-networkx. 126s Preparing to unpack .../17-python3-networkx_3.2.1-4ubuntu1_all.deb ... 126s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 127s Selecting previously unselected package python3-numpy. 127s Preparing to unpack .../18-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 127s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 127s Selecting previously unselected package python3-packaging. 127s Preparing to unpack .../19-python3-packaging_24.1-1_all.deb ... 127s Unpacking python3-packaging (24.1-1) ... 127s Selecting previously unselected package python3-tz. 127s Preparing to unpack .../20-python3-tz_2024.1-2_all.deb ... 127s Unpacking python3-tz (2024.1-2) ... 127s Selecting previously unselected package python3-pandas-lib:s390x. 127s Preparing to unpack .../21-python3-pandas-lib_2.2.3+dfsg-5_s390x.deb ... 127s Unpacking python3-pandas-lib:s390x (2.2.3+dfsg-5) ... 127s Selecting previously unselected package python3-pandas. 127s Preparing to unpack .../22-python3-pandas_2.2.3+dfsg-5_all.deb ... 127s Unpacking python3-pandas (2.2.3+dfsg-5) ... 127s Selecting previously unselected package python3-pluggy. 127s Preparing to unpack .../23-python3-pluggy_1.5.0-1_all.deb ... 127s Unpacking python3-pluggy (1.5.0-1) ... 127s Selecting previously unselected package python3-scipy. 127s Preparing to unpack .../24-python3-scipy_1.13.1-5_s390x.deb ... 127s Unpacking python3-scipy (1.13.1-5) ... 128s Selecting previously unselected package python3-pomegranate. 128s Preparing to unpack .../25-python3-pomegranate_0.14.8-7_s390x.deb ... 128s Unpacking python3-pomegranate (0.14.8-7) ... 128s Selecting previously unselected package python3-pytest. 128s Preparing to unpack .../26-python3-pytest_8.3.3-1_all.deb ... 128s Unpacking python3-pytest (8.3.3-1) ... 128s Selecting previously unselected package autopkgtest-satdep. 128s Preparing to unpack .../27-1-autopkgtest-satdep.deb ... 128s Unpacking autopkgtest-satdep (0) ... 128s Setting up python3-iniconfig (1.1.1-2) ... 128s Setting up fonts-lato (2.015-1) ... 128s Setting up python3-joblib (1.3.2-5) ... 128s Setting up python3-all (3.12.6-0ubuntu1) ... 128s Setting up python3-networkx (3.2.1-4ubuntu1) ... 130s Setting up python3-tz (2024.1-2) ... 130s Setting up python3-six (1.16.0-7) ... 130s Setting up python3-decorator (5.1.1-5) ... 130s Setting up libblas3:s390x (3.12.0-3build2) ... 130s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 130s Setting up python3-packaging (24.1-1) ... 130s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 130s Setting up python3-pluggy (1.5.0-1) ... 130s Setting up python3-dateutil (2.9.0-2) ... 130s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 130s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 130s Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 130s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 130s Setting up liblapack3:s390x (3.12.0-3build2) ... 130s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 130s Setting up python3-pytest (8.3.3-1) ... 130s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 132s Setting up libjs-sphinxdoc (7.4.7-4) ... 132s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 132s Setting up python3-scipy (1.13.1-5) ... 136s Setting up python3-pomegranate (0.14.8-7) ... 136s Setting up python3-pandas-lib:s390x (2.2.3+dfsg-5) ... 136s Setting up python-pomegranate-doc (0.14.8-7) ... 136s Setting up python3-pandas (2.2.3+dfsg-5) ... 142s Setting up autopkgtest-satdep (0) ... 142s Processing triggers for man-db (2.13.0-1) ... 142s Processing triggers for libc-bin (2.40-1ubuntu3) ... 145s (Reading database ... 63485 files and directories currently installed.) 145s Removing autopkgtest-satdep (0) ... 145s autopkgtest [20:02:11]: test run-tests: [----------------------- 146s ============================= test session starts ============================== 146s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 146s cachedir: .pytest_cache 146s rootdir: /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp 146s plugins: typeguard-4.4.1 147s collecting ... collected 598 items 147s 147s tests/test_bayes_classifier.py::test_unpickle_bayes_model PASSED [ 0%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_initialization PASSED [ 0%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_initialization PASSED [ 0%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_predict_log_proba PASSED [ 0%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_predict_log_proba PASSED [ 0%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_nan_predict_log_proba PASSED [ 1%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_nan_predict_log_proba PASSED [ 1%] 147s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_predict_log_proba_parallel PASSED [ 1%] 147s 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tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_one_check_input PASSED [ 70%] 157s tests/test_hmm.py::test_hmm_univariate_gaussian_from_samples PASSED [ 70%] 157s tests/test_hmm.py::test_hmm_multivariate_gaussian_from_samples PASSED [ 70%] 157s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_end_state PASSED [ 70%] 157s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_no_end_state PASSED [ 71%] 157s tests/test_hmm.py::test_hmm_json_general_mixture_gaussian PASSED [ 71%] 157s tests/test_hmm.py::test_hmm_robust_from_json_general_mixture_gaussian PASSED [ 71%] 157s tests/test_hmm.py::test_io_fit PASSED [ 71%] 157s tests/test_hmm.py::test_io_from_samples_hmm PASSED [ 71%] 157s tests/test_io.py::test_io_datagenerator_shape PASSED [ 71%] 157s tests/test_io.py::test_io_datagenerator_classes_fail PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_classes PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_x_batches PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_w_batches PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_y_batches PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_wy_batches PASSED [ 72%] 157s tests/test_io.py::test_io_datagenerator_wy_unlabeled PASSED [ 73%] 157s tests/test_io.py::test_io_datagenerator_wy_labeled PASSED [ 73%] 157s tests/test_io.py::test_io_seqgenerator_uni_shape PASSED [ 73%] 157s tests/test_io.py::test_io_seqgenerator_symbol_shape PASSED [ 73%] 157s tests/test_io.py::test_io_seqgenerator_shape PASSED [ 73%] 157s tests/test_io.py::test_io_seqgenerator_x_batches PASSED [ 73%] 157s tests/test_io.py::test_io_seqgenerator_x_symbol_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_w_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_w_symbol_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_y_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_y_symbol_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_wy_batches PASSED [ 74%] 157s tests/test_io.py::test_io_seqgenerator_wy_symbol_batches PASSED [ 75%] 157s tests/test_io.py::test_io_seqgenerator_wy_unlabeled PASSED [ 75%] 157s tests/test_io.py::test_io_seqgenerator_wy_symbol_unlabeled PASSED [ 75%] 157s tests/test_io.py::test_io_seqgenerator_wy_labeled PASSED [ 75%] 157s tests/test_io.py::test_io_seqgenerator_wy_symbol_labeled PASSED [ 75%] 157s tests/test_io.py::test_io_dfgenerator_shape PASSED [ 75%] 158s tests/test_io.py::test_io_dfgenerator_classes_fail PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_numpy_classes PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_pandas_classes PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_str_classes PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_x_batches PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_w_batches PASSED [ 76%] 158s tests/test_io.py::test_io_dfgenerator_w_str_batches PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_y_batches PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_y_str_batches PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_wy_batches PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_wy_str_batches PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_wy_unlabeled PASSED [ 77%] 158s tests/test_io.py::test_io_dfgenerator_wy_str_unlabeled PASSED [ 78%] 158s tests/test_io.py::test_io_dfgenerator_wy_labeled PASSED [ 78%] 158s tests/test_io.py::test_io_dfgenerator_wy_str_labeled PASSED [ 78%] 158s tests/test_kmeans.py::test_kmeans_init PASSED [ 78%] 158s tests/test_kmeans.py::test_kmeans_from_samples PASSED [ 78%] 158s tests/test_kmeans.py::test_kmeans_from_samples_parallel PASSED [ 78%] 158s tests/test_kmeans.py::test_kmeans_predict PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_predict_parallel PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_predict_large PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_predict_large_parallel PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_fit PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_fit_parallel PASSED [ 79%] 158s tests/test_kmeans.py::test_kmeans_multiple_init PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_ooc_from_samples PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_ooc_fit PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_minibatch_from_samples PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_minibatch_fit PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_nan_from_samples PASSED [ 80%] 158s tests/test_kmeans.py::test_kmeans_nan_from_samples_parallel PASSED [ 81%] 158s tests/test_kmeans.py::test_kmeans_nan_fit PASSED [ 81%] 159s tests/test_kmeans.py::test_kmeans_nan_fit_parallel PASSED [ 81%] 159s tests/test_kmeans.py::test_kmeans_nan_fit_large PASSED [ 81%] 159s tests/test_kmeans.py::test_kmeans_nan_fit_large_parallel PASSED [ 81%] 159s tests/test_kmeans.py::test_kmeans_nan_predict PASSED [ 81%] 159s tests/test_kmeans.py::test_kmeans_nan_predict_parallel PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_nan_large_predict PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_nan_large_predict_parallel PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_nan_multiple_init PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_ooc_nan_from_samples PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_ooc_nan_fit PASSED [ 82%] 159s tests/test_kmeans.py::test_kmeans_minibatch_nan_from_samples PASSED [ 83%] 159s tests/test_kmeans.py::test_kmeans_minibatch_nan_fit PASSED [ 83%] 159s tests/test_markov_chain.py::test_zeroth_dist PASSED [ 83%] 159s tests/test_markov_chain.py::test_first_dist PASSED [ 83%] 159s tests/test_markov_chain.py::test_second_dist PASSED [ 83%] 159s tests/test_markov_chain.py::test_constructors PASSED [ 83%] 159s tests/test_markov_chain.py::test_first_log_probability PASSED [ 84%] 159s tests/test_markov_chain.py::test_summarize_no_weights_no_inertia PASSED [ 84%] 159s tests/test_markov_chain.py::test_summarize_no_weights_with_inertia PASSED [ 84%] 159s tests/test_markov_chain.py::test_summarize_with_weights_no_inertia PASSED [ 84%] 159s tests/test_markov_chain.py::test_summarize_with_weights_with_inertia PASSED [ 84%] 159s tests/test_markov_chain.py::test_raise_errors PASSED [ 84%] 159s tests/test_markov_chain.py::test_pickling PASSED [ 85%] 159s tests/test_markov_chain.py::test_json PASSED [ 85%] 159s tests/test_markov_chain.py::test_robust_from_json PASSED [ 85%] 159s tests/test_markov_network.py::test_initialize PASSED [ 85%] 159s tests/test_markov_network.py::test_structure PASSED [ 85%] 159s tests/test_markov_network.py::test_partition PASSED [ 85%] 159s tests/test_markov_network.py::test_d PASSED [ 86%] 159s tests/test_markov_network.py::test_d_mixed PASSED [ 86%] 159s tests/test_markov_network.py::test_log_probability_int PASSED [ 86%] 159s tests/test_markov_network.py::test_log_probability_str PASSED [ 86%] 159s tests/test_markov_network.py::test_log_probability_bool PASSED [ 86%] 159s tests/test_markov_network.py::test_log_probability_mixed PASSED [ 86%] 159s tests/test_markov_network.py::test_log_probability_unnormalized_int PASSED [ 87%] 159s tests/test_markov_network.py::test_log_probability_unnormalized_str PASSED [ 87%] 159s tests/test_markov_network.py::test_log_probability_unnormalized_bool PASSED [ 87%] 159s tests/test_markov_network.py::test_log_probability_unnormalized_mixed PASSED [ 87%] 159s tests/test_markov_network.py::test_predict_int PASSED [ 87%] 159s tests/test_markov_network.py::test_predict_str PASSED [ 87%] 159s tests/test_markov_network.py::test_predict_bool PASSED [ 88%] 159s tests/test_markov_network.py::test_predict_mixed PASSED [ 88%] 159s tests/test_naive_bayes.py::test_nb_univariate_initialization PASSED [ 88%] 159s tests/test_naive_bayes.py::test_nb_multivariate_initialization PASSED [ 88%] 159s tests/test_naive_bayes.py::test_nb_univariate_constructors PASSED [ 88%] 159s tests/test_naive_bayes.py::test_nb_multivariate_constructors PASSED [ 88%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_predict_log_proba PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_predict_log_proba PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_predict_log_proba PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_nan_predict_log_proba PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_nan_predict_log_proba PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_predict_log_proba_parallel PASSED [ 89%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_predict_log_proba_parallel PASSED [ 90%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_predict_log_proba_parallel PASSED [ 90%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_predict_proba 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159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_nan_predict PASSED [ 92%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_predict_parallel PASSED [ 92%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_predict_parallel PASSED [ 92%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_predict_parallel PASSED [ 92%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_fit PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_fit PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_fit PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_nan_fit PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_nan_fit PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_univariate_mixed_fit_parallel PASSED [ 93%] 159s tests/test_naive_bayes.py::test_nb_multivariate_gaussian_fit_parallel PASSED [ 94%] 159s tests/test_naive_bayes.py::test_nb_multivariate_mixed_fit_parallel 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tests/test_naive_bayes.py::test_io_log_probability PASSED [ 96%] 159s tests/test_naive_bayes.py::test_io_predict PASSED [ 96%] 159s tests/test_naive_bayes.py::test_io_predict_proba PASSED [ 96%] 159s tests/test_naive_bayes.py::test_io_predict_log_proba PASSED [ 96%] 159s tests/test_naive_bayes.py::test_io_fit PASSED [ 97%] 159s tests/test_naive_bayes.py::test_io_from_samples PASSED [ 97%] 159s tests/test_naive_bayes.py::test_discrete_distribution PASSED [ 97%] 159s tests/test_naive_bayes.py::test_bernoulli_discrete_distribution PASSED [ 97%] 159s tests/test_profile_hmm.py::test_same_length_viterbi PASSED [ 97%] 159s tests/test_profile_hmm.py::test_variable_length_viterbi PASSED [ 97%] 159s tests/test_profile_hmm.py::test_log_probability PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_transitions PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_transitions_w_training PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_transitions_w_vtraining PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_transitions_w_tied_training PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_transitions_w_tied_vtraining PASSED [ 98%] 159s tests/test_profile_hmm.py::test_posterior_emissions PASSED [ 99%] 159s tests/test_profile_hmm.py::test_posterior_emissions_w_multitransition_setup PASSED [ 99%] 159s tests/test_profile_hmm.py::test_posterior_emissions_w_tied_edge_setup PASSED [ 99%] 159s tests/test_profile_hmm.py::test_properties PASSED [ 99%] 159s tests/test_profile_hmm.py::test_to_json PASSED [ 99%] 159s tests/test_profile_hmm.py::test_from_json PASSED [100%] 159s 159s =============================== warnings summary =============================== 159s tests/test_custom_distributions.py: 29600 warnings 159s tests/test_hmm.py: 375 warnings 159s /usr/lib/python3/dist-packages/joblib/parallel.py:1792: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s res = func(*args, **kwargs) 159s 159s tests/test_custom_distributions.py: 40 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:223: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 400 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:232: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:345: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:359: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:373: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:387: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:402: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 2000 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:411: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 40 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:493: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 400 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:504: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:620: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:634: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:648: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:662: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 159s 159s tests/test_custom_distributions.py: 200 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:679: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 2000 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:690: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 10 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:700: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 30 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:705: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_equal(model1.predict(X), model2.predict(X)) 159s 159s tests/test_custom_distributions.py: 30 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:710: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 159s 159s tests/test_custom_distributions.py: 30 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:715: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 159s 159s tests/test_custom_distributions.py: 10 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:724: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 159s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 159s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 159s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:733: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 50 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:787: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 150 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:792: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 159s 159s tests/test_custom_distributions.py: 150 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:797: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 159s 159s tests/test_custom_distributions.py: 150 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:802: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 159s 159s tests/test_custom_distributions.py: 30 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:811: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s tests/test_custom_distributions.py: 20 warnings 159s /tmp/autopkgtest.HRi1VQ/autopkgtest_tmp/tests/test_custom_distributions.py:820: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 159s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 159s 159s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 159s ===================== 598 passed, 37519 warnings in 13.58s ===================== 160s autopkgtest [20:02:26]: test run-tests: -----------------------] 160s run-tests PASS 160s autopkgtest [20:02:26]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 161s autopkgtest [20:02:27]: test autodep8-python3: preparing testbed 297s autopkgtest [20:04:43]: testbed dpkg architecture: s390x 297s autopkgtest [20:04:43]: testbed apt version: 2.9.8 297s autopkgtest [20:04:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup 298s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 298s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1043 kB] 299s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 299s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 299s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [92.2 kB] 299s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [150 kB] 299s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [747 kB] 299s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4940 B] 299s Fetched 2133 kB in 1s (2724 kB/s) 299s Reading package lists... 301s Reading package lists... 301s Building dependency tree... 301s Reading state information... 301s Calculating upgrade... 301s The following NEW packages will be installed: 301s libassuan9 301s The following packages will be upgraded: 301s libgpgme11t64 libseccomp2 python3-cffi-backend python3-markupsafe 301s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 301s Need to get 352 kB of archives. 301s After this operation, 352 kB of additional disk space will be used. 301s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libseccomp2 s390x 2.5.5-1ubuntu5 [52.1 kB] 301s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cffi-backend s390x 1.17.1-2build1 [91.3 kB] 301s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libassuan9 s390x 3.0.1-2 [41.3 kB] 301s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.24.0-2ubuntu1 [154 kB] 301s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3-markupsafe s390x 2.1.5-1build3 [12.9 kB] 302s Fetched 352 kB in 0s (725 kB/s) 302s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 302s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu5_s390x.deb ... 302s Unpacking libseccomp2:s390x (2.5.5-1ubuntu5) over (2.5.5-1ubuntu4) ... 302s Setting up libseccomp2:s390x (2.5.5-1ubuntu5) ... 302s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 302s Preparing to unpack .../python3-cffi-backend_1.17.1-2build1_s390x.deb ... 302s Unpacking python3-cffi-backend:s390x (1.17.1-2build1) over (1.17.1-2) ... 302s Selecting previously unselected package libassuan9:s390x. 302s Preparing to unpack .../libassuan9_3.0.1-2_s390x.deb ... 302s Unpacking libassuan9:s390x (3.0.1-2) ... 302s Preparing to unpack .../libgpgme11t64_1.24.0-2ubuntu1_s390x.deb ... 302s Unpacking libgpgme11t64:s390x (1.24.0-2ubuntu1) over (1.23.2-5ubuntu4) ... 302s Preparing to unpack .../python3-markupsafe_2.1.5-1build3_s390x.deb ... 302s Unpacking python3-markupsafe (2.1.5-1build3) over (2.1.5-1build2) ... 302s Setting up python3-markupsafe (2.1.5-1build3) ... 302s Setting up libassuan9:s390x (3.0.1-2) ... 302s Setting up libgpgme11t64:s390x (1.24.0-2ubuntu1) ... 302s Setting up python3-cffi-backend:s390x (1.17.1-2build1) ... 302s Processing triggers for libc-bin (2.40-1ubuntu3) ... 302s Reading package lists... 302s Building dependency tree... 302s Reading state information... 303s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 303s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 303s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 303s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 303s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 304s Reading package lists... 304s Reading package lists... 304s Building dependency tree... 304s Reading state information... 304s Calculating upgrade... 304s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 304s Reading package lists... 304s Building dependency tree... 304s Reading state information... 305s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 308s Reading package lists... 308s Building dependency tree... 308s Reading state information... 308s Starting pkgProblemResolver with broken count: 0 308s Starting 2 pkgProblemResolver with broken count: 0 308s Done 309s The following additional packages will be installed: 309s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 309s python3-joblib python3-networkx python3-numpy python3-pomegranate 309s python3-scipy 309s Suggested packages: 309s python-joblib-doc python3-gdal python3-matplotlib python3-pydot 309s python3-pygraphviz gcc gfortran python-numpy-doc python3-dev python3-pytest 309s python-pomegranate-doc python-scipy-doc 309s Recommended packages: 309s python3-pytest python3-simplejson python3-psutil g++ | c++-compiler 309s python3-pil 309s The following NEW packages will be installed: 309s autopkgtest-satdep libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all 309s python3-decorator python3-joblib python3-networkx python3-numpy 309s python3-pomegranate python3-scipy 309s 0 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 309s Need to get 41.2 MB/41.2 MB of archives. 309s After this operation, 235 MB of additional disk space will be used. 309s Get:1 /tmp/autopkgtest.HRi1VQ/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B] 309s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 309s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 309s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 309s Get:5 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 309s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all s390x 3.12.6-0ubuntu1 [890 B] 309s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 309s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.3.2-5 [206 kB] 309s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 310s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 310s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5 [17.5 MB] 310s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python3-pomegranate s390x 0.14.8-7 [4072 kB] 311s Fetched 41.2 MB in 2s (21.4 MB/s) 311s Selecting previously unselected package libblas3:s390x. 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 311s Preparing to unpack .../00-libblas3_3.12.0-3build2_s390x.deb ... 311s Unpacking libblas3:s390x (3.12.0-3build2) ... 311s Selecting previously unselected package libgfortran5:s390x. 311s Preparing to unpack .../01-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 311s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 311s Selecting previously unselected package liblapack3:s390x. 311s Preparing to unpack .../02-liblapack3_3.12.0-3build2_s390x.deb ... 311s Unpacking liblapack3:s390x (3.12.0-3build2) ... 311s Selecting previously unselected package liblbfgsb0:s390x. 311s Preparing to unpack .../03-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 311s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 311s Selecting previously unselected package python3-all. 311s Preparing to unpack .../04-python3-all_3.12.6-0ubuntu1_s390x.deb ... 311s Unpacking python3-all (3.12.6-0ubuntu1) ... 311s Selecting previously unselected package python3-decorator. 311s Preparing to unpack .../05-python3-decorator_5.1.1-5_all.deb ... 311s Unpacking python3-decorator (5.1.1-5) ... 311s Selecting previously unselected package python3-joblib. 311s Preparing to unpack .../06-python3-joblib_1.3.2-5_all.deb ... 311s Unpacking python3-joblib (1.3.2-5) ... 311s Selecting previously unselected package python3-networkx. 311s Preparing to unpack .../07-python3-networkx_3.2.1-4ubuntu1_all.deb ... 311s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 311s Selecting previously unselected package python3-numpy. 311s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 311s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 311s Selecting previously unselected package python3-scipy. 311s Preparing to unpack .../09-python3-scipy_1.13.1-5_s390x.deb ... 311s Unpacking python3-scipy (1.13.1-5) ... 312s Selecting previously unselected package python3-pomegranate. 312s Preparing to unpack .../10-python3-pomegranate_0.14.8-7_s390x.deb ... 312s Unpacking python3-pomegranate (0.14.8-7) ... 312s Selecting previously unselected package autopkgtest-satdep. 312s Preparing to unpack .../11-2-autopkgtest-satdep.deb ... 312s Unpacking autopkgtest-satdep (0) ... 312s Setting up python3-joblib (1.3.2-5) ... 312s Setting up python3-all (3.12.6-0ubuntu1) ... 312s Setting up python3-networkx (3.2.1-4ubuntu1) ... 314s Setting up python3-decorator (5.1.1-5) ... 314s Setting up libblas3:s390x (3.12.0-3build2) ... 314s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 314s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 314s Setting up liblapack3:s390x (3.12.0-3build2) ... 314s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 314s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 316s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 316s Setting up python3-scipy (1.13.1-5) ... 320s Setting up python3-pomegranate (0.14.8-7) ... 320s Setting up autopkgtest-satdep (0) ... 320s Processing triggers for man-db (2.13.0-1) ... 320s Processing triggers for libc-bin (2.40-1ubuntu3) ... 322s (Reading database ... 61229 files and directories currently installed.) 322s Removing autopkgtest-satdep (0) ... 326s autopkgtest [20:05:12]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import pomegranate; print(pomegranate)" ; done 326s autopkgtest [20:05:12]: test autodep8-python3: [----------------------- 326s Testing with python3.12: 326s 326s autopkgtest [20:05:12]: test autodep8-python3: -----------------------] 327s autodep8-python3 PASS (superficial) 327s autopkgtest [20:05:13]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 328s autopkgtest [20:05:14]: @@@@@@@@@@@@@@@@@@@@ summary 328s run-tests PASS 328s autodep8-python3 PASS (superficial) 333s virt: nova [W] Using flock in prodstack6-s390x 333s virt: flock: timeout while waiting to get lock 333s virt: Creating nova instance adt-plucky-s390x-python-pomegranate-20241115-195946-juju-7f2275-prod-proposed-migration-environment-2-a23b9803-f907-426b-ad89-7a0087956646 from image adt/ubuntu-plucky-s390x-server-20241115.img (UUID c94000c6-8e8d-4693-8d37-fa9d34cd2414)... 333s virt: nova [W] Using flock in prodstack6-s390x 333s virt: Creating nova instance adt-plucky-s390x-python-pomegranate-20241115-195946-juju-7f2275-prod-proposed-migration-environment-2-a23b9803-f907-426b-ad89-7a0087956646 from image adt/ubuntu-plucky-s390x-server-20241115.img (UUID c94000c6-8e8d-4693-8d37-fa9d34cd2414)...