0s autopkgtest [14:37:41]: starting date and time: 2024-12-04 14:37:41+0000 0s autopkgtest [14:37:41]: git checkout: 48af33f0 Fix --add-apt-source=ppa for focal 0s autopkgtest [14:37:41]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bs_2a3wu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:h5py,src:openmpi --apt-upgrade python-meshio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.11.0-8ubuntu3 openmpi/5.0.6-3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-22.secgroup --name adt-plucky-s390x-python-meshio-20241204-143741-juju-7f2275-prod-proposed-migration-environment-20-64c96f2c-ab4b-4a1f-a134-aea776224b29 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 115s autopkgtest [14:39:36]: testbed dpkg architecture: s390x 115s autopkgtest [14:39:36]: testbed apt version: 2.9.16 116s autopkgtest [14:39:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 116s autopkgtest [14:39:37]: testbed release detected to be: None 116s autopkgtest [14:39:37]: updating testbed package index (apt update) 117s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 117s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 117s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 117s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 117s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [745 kB] 117s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [58.3 kB] 117s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.2 kB] 117s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 117s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [106 kB] 117s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [928 B] 117s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [578 kB] 117s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [7444 B] 118s Fetched 1593 kB in 1s (1775 kB/s) 118s Reading package lists... 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Calculating upgrade... 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 120s autopkgtest [14:39:41]: upgrading testbed (apt dist-upgrade and autopurge) 120s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 120s Starting 2 pkgProblemResolver with broken count: 0 120s Done 120s Entering ResolveByKeep 121s 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s Starting pkgProblemResolver with broken count: 0 121s Starting 2 pkgProblemResolver with broken count: 0 121s Done 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 124s autopkgtest [14:39:45]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 124s autopkgtest [14:39:45]: @@@@@@@@@@@@@@@@@@@@ apt-source python-meshio 126s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (dsc) [2645 B] 126s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (tar) [491 kB] 126s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-meshio 7.0.0-really-5.3.5-3 (diff) [36.7 kB] 126s gpgv: Signature made Thu Oct 24 08:56:59 2024 UTC 126s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 126s gpgv: Can't check signature: No public key 126s dpkg-source: warning: cannot verify inline signature for ./python-meshio_7.0.0-really-5.3.5-3.dsc: no acceptable signature found 126s dpkg-source: warning: diff 'src/debian/patches/xdmf_time_series_PR1464.patch' patches file src/tests/test_xdmf.py more than once 126s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/src/meshio/__init__.py more than once 126s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/src/meshio/dgf/_dgf.py more than once 126s dpkg-source: warning: diff 'src/debian/patches/support_DGF_PR1467.patch' patches file src/tests/test_dgf.py more than once 126s autopkgtest [14:39:47]: testing package python-meshio version 7.0.0-really-5.3.5-3 127s autopkgtest [14:39:48]: build not needed 127s autopkgtest [14:39:48]: test test-meshio: preparing testbed 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 128s Starting pkgProblemResolver with broken count: 3 128s Starting 2 pkgProblemResolver with broken count: 3 128s Investigating (0) satisfy:command-line:s390x < none -> 1 @un puN Ib > 128s Broken satisfy:command-line:s390x Depends on python3-dolfin-real:s390x < none @un H > 128s Considering python3-dolfin-real:s390x 2 as a solution to satisfy:command-line:s390x 9998 128s Considering python3-dolfin-real:s390x 2 as a solution to satisfy:command-line:s390x 9998 128s Investigating (0) libopenmpi40:s390x < none -> 5.0.6-3 @un puN Ib > 128s Broken libopenmpi40:s390x Breaks on libopenmpi3:s390x < none @un H > (< 5.0.6-3) 128s Conflicts//Breaks against version 4.1.6-13.3ubuntu2 for libopenmpi3t64 but that is not InstVer, ignoring 128s Considering libopenmpi3t64:s390x 64 as a solution to libopenmpi40:s390x 2 128s Re-Instated libopenmpi3t64:s390x 128s Broken libopenmpi40:s390x Breaks on libopenmpi3t64:s390x < none -> 5.0.5-6 @un puN > (< 5.0.6-3) 128s Considering libopenmpi3t64:s390x 2 as a solution to libopenmpi40:s390x 2 128s Conflicts//Breaks against version 4.1.6-13.3ubuntu2 for libopenmpi3t64 but that is not InstVer, ignoring 128s Investigating (0) python3-dolfin:s390x < none -> 2019.2.0~legacy20240219.1c52e83-10ubuntu1 @un puN Ib > 128s Broken python3-dolfin:s390x Depends on python3-dolfin-real:s390x < none @un H > 128s Considering python3-dolfin-real:s390x 2 as a solution to python3-dolfin:s390x -1 128s Considering python3-dolfin-real:s390x 2 as a solution to python3-dolfin:s390x -1 128s Broken python3-dolfin:s390x Depends on python3-dolfin64-real:s390x < none @un H > 128s Considering python3-dolfin64-real:s390x 1 as a solution to python3-dolfin:s390x -1 128s Considering python3-dolfin64-real:s390x 1 as a solution to python3-dolfin:s390x -1 128s Done 128s Some packages could not be installed. This may mean that you have 128s requested an impossible situation or if you are using the unstable 128s distribution that some required packages have not yet been created 128s or been moved out of Incoming. 128s The following information may help to resolve the situation: 128s 128s The following packages have unmet dependencies: 128s libopenmpi40 : Breaks: libopenmpi3 (< 5.0.6-3) 128s Breaks: libopenmpi3t64 (< 5.0.6-3) but 5.0.5-6 is to be installed 128s python3-dolfin : Depends: python3-dolfin-real but it is not installable or 128s python3-dolfin64-real but it is not installable 128s satisfy:command-line : Depends: python3-dolfin-real but it is not installable 128s E: Unable to correct problems, you have held broken packages. 128s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 128s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s Starting pkgProblemResolver with broken count: 7 129s Starting 2 pkgProblemResolver with broken count: 7 129s Investigating (0) libpetsc-real3.21:s390x < none -> 3.21.6+dfsg1-2ubuntu2 @un puN Ib > 129s Broken libpetsc-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libpetsc-real3.21:s390x 14 129s Investigating (0) python3-petsc4py-real3.21:s390x < none -> 3.21.6-2ubuntu2 @un puN Ib > 129s Broken python3-petsc4py-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-petsc4py-real3.21:s390x 8 129s Investigating (0) libhypre-2.31.0:s390x < none -> 2.31.0-1exp2 @un puN Ib > 129s Broken libhypre-2.31.0:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 4.1.6) 129s Considering libopenmpi3t64:s390x 0 as a solution to libhypre-2.31.0:s390x 6 129s Considering libopenmpi3t64:s390x 0 as a solution to libhypre-2.31.0:s390x 6 129s Investigating (0) libslepc-real3.21:s390x < none -> 3.21.2+dfsg1-3 @un puN Ib > 129s Broken libslepc-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libslepc-real3.21:s390x 4 129s Investigating (0) python3-slepc4py-real3.21:s390x < none -> 3.21.2-1ubuntu2 @un puN Ib > 129s Broken python3-slepc4py-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-slepc4py-real3.21:s390x 4 129s Investigating (0) libdolfin2019.2t64:s390x < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 129s Broken libdolfin2019.2t64:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libdolfin2019.2t64:s390x 2 129s Investigating (0) python3-dolfin-real:s390x < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 129s Broken python3-dolfin-real:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-dolfin-real:s390x 1 129s Done 129s Some packages could not be installed. This may mean that you have 129s requested an impossible situation or if you are using the unstable 129s distribution that some required packages have not yet been created 129s or been moved out of Incoming. 129s The following information may help to resolve the situation: 129s 129s The following packages have unmet dependencies: 129s libdolfin2019.2t64 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 129s libpetsc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s libslepc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-dolfin-real : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-petsc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-slepc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s E: Unable to correct problems, you have held broken packages. 129s test-meshio FAIL badpkg 129s blame: python-meshio 129s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 129s autopkgtest [14:39:50]: test test-msh2xdmf: preparing testbed 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 129s Starting pkgProblemResolver with broken count: 7 129s Starting 2 pkgProblemResolver with broken count: 7 129s Investigating (0) libpetsc-real3.21:s390x < none -> 3.21.6+dfsg1-2ubuntu2 @un puN Ib > 129s Broken libpetsc-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libpetsc-real3.21:s390x 14 129s Investigating (0) python3-petsc4py-real3.21:s390x < none -> 3.21.6-2ubuntu2 @un puN Ib > 129s Broken python3-petsc4py-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-petsc4py-real3.21:s390x 8 129s Investigating (0) libhypre-2.31.0:s390x < none -> 2.31.0-1exp2 @un puN Ib > 129s Broken libhypre-2.31.0:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 4.1.6) 129s Considering libopenmpi3t64:s390x 0 as a solution to libhypre-2.31.0:s390x 6 129s Considering libopenmpi3t64:s390x 0 as a solution to libhypre-2.31.0:s390x 6 129s Investigating (0) libslepc-real3.21:s390x < none -> 3.21.2+dfsg1-3 @un puN Ib > 129s Broken libslepc-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libslepc-real3.21:s390x 4 129s Investigating (0) python3-slepc4py-real3.21:s390x < none -> 3.21.2-1ubuntu2 @un puN Ib > 129s Broken python3-slepc4py-real3.21:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-slepc4py-real3.21:s390x 4 129s Investigating (0) libdolfin2019.2t64:s390x < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 129s Broken libdolfin2019.2t64:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to libdolfin2019.2t64:s390x 2 129s Investigating (0) python3-dolfin-real:s390x < none -> 2019.2.0~legacy20240219.1c52e83-11ubuntu1 @un puN Ib > 129s Broken python3-dolfin-real:s390x Depends on libopenmpi3t64:s390x < none @un pH > (>= 5.0.5) 129s Considering libopenmpi3t64:s390x 0 as a solution to python3-dolfin-real:s390x 1 129s Done 129s Some packages could not be installed. This may mean that you have 129s requested an impossible situation or if you are using the unstable 129s distribution that some required packages have not yet been created 129s or been moved out of Incoming. 129s The following information may help to resolve the situation: 129s 129s The following packages have unmet dependencies: 129s libdolfin2019.2t64 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s libhypre-2.31.0 : Depends: libopenmpi3t64 (>= 4.1.6) but it is not installable 129s libpetsc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s libslepc-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-dolfin-real : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-petsc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s python3-slepc4py-real3.21 : Depends: libopenmpi3t64 (>= 5.0.5) but it is not installable 129s E: Unable to correct problems, you have held broken packages. 129s test-msh2xdmf FAIL badpkg 129s blame: python-meshio 129s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 129s autopkgtest [14:39:50]: @@@@@@@@@@@@@@@@@@@@ summary 129s test-meshio FAIL badpkg 129s blame: python-meshio 129s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 129s test-msh2xdmf FAIL badpkg 129s blame: python-meshio 129s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 144s nova [W] Using flock in prodstack6-s390x 144s flock: timeout while waiting to get lock 144s Creating nova instance adt-plucky-s390x-python-meshio-20241204-143741-juju-7f2275-prod-proposed-migration-environment-20-64c96f2c-ab4b-4a1f-a134-aea776224b29 from image adt/ubuntu-plucky-s390x-server-20241204.img (UUID 89b4900b-e439-4dd9-be41-eb47bd412513)...