0s autopkgtest [14:50:27]: starting date and time: 2024-11-13 14:50:27+0000 0s autopkgtest [14:50:27]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [14:50:27]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ae3c3mdg/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-hdmedians --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-29.secgroup --name adt-plucky-s390x-python-hdmedians-20241113-145026-juju-7f2275-prod-proposed-migration-environment-15-be596dac-988a-46a4-999a-57147f10a547 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 107s autopkgtest [14:52:14]: testbed dpkg architecture: s390x 107s autopkgtest [14:52:14]: testbed apt version: 2.9.8 107s autopkgtest [14:52:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 108s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 108s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 108s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.5 kB] 108s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [962 kB] 108s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 108s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [110 kB] 108s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [639 kB] 108s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [17.4 kB] 109s Fetched 1931 kB in 1s (2340 kB/s) 109s Reading package lists... 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 111s Calculating upgrade... 111s The following NEW packages will be installed: 111s python3.13-gdbm 111s The following packages will be upgraded: 111s libgnutls30t64 libgpgme11t64 libjson-glib-1.0-0 libjson-glib-1.0-common 111s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 111s 9 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 111s Need to get 1285 kB of archives. 111s After this operation, 103 kB of additional disk space will be used. 111s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB] 111s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB] 111s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB] 111s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls30t64 s390x 3.8.8-2ubuntu1 [950 kB] 112s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 112s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 112s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB] 112s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 112s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-0 s390x 1.10.0+ds-3 [67.5 kB] 112s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libutempter0 s390x 1.2.1-4 [9708 B] 112s Fetched 1285 kB in 1s (2154 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 112s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ... 112s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 112s Setting up python3-minimal (3.12.7-1) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 112s Preparing to unpack .../python3_3.12.7-1_s390x.deb ... 112s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 112s Preparing to unpack .../libpython3-stdlib_3.12.7-1_s390x.deb ... 112s Unpacking libpython3-stdlib:s390x (3.12.7-1) over (3.12.6-0ubuntu1) ... 112s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_s390x.deb ... 112s Unpacking libgnutls30t64:s390x (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 112s Setting up libgnutls30t64:s390x (3.8.8-2ubuntu1) ... 112s Selecting previously unselected package python3.13-gdbm. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 112s Preparing to unpack .../0-python3.13-gdbm_3.13.0-2_s390x.deb ... 112s Unpacking python3.13-gdbm (3.13.0-2) ... 112s Preparing to unpack .../1-python3-gdbm_3.12.7-1_s390x.deb ... 112s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 112s Preparing to unpack .../2-libgpgme11t64_1.23.2-5ubuntu4_s390x.deb ... 112s Unpacking libgpgme11t64:s390x (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 112s Preparing to unpack .../3-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 112s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 112s Preparing to unpack .../4-libjson-glib-1.0-0_1.10.0+ds-3_s390x.deb ... 112s Unpacking libjson-glib-1.0-0:s390x (1.10.0+ds-3) over (1.10.0+ds-2) ... 112s Preparing to unpack .../5-libutempter0_1.2.1-4_s390x.deb ... 112s Unpacking libutempter0:s390x (1.2.1-4) over (1.2.1-3build1) ... 112s Setting up libutempter0:s390x (1.2.1-4) ... 112s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 112s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ... 112s Setting up python3.13-gdbm (3.13.0-2) ... 112s Setting up libpython3-stdlib:s390x (3.12.7-1) ... 112s Setting up python3 (3.12.7-1) ... 113s Setting up libjson-glib-1.0-0:s390x (1.10.0+ds-3) ... 113s Setting up python3-gdbm:s390x (3.12.7-1) ... 113s Processing triggers for man-db (2.12.1-3) ... 113s Processing triggers for libc-bin (2.40-1ubuntu3) ... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 114s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 114s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 114s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 115s Reading package lists... 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 115s Calculating upgrade... 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 115s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s autopkgtest [14:52:25]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 118s autopkgtest [14:52:25]: @@@@@@@@@@@@@@@@@@@@ apt-source python-hdmedians 119s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (dsc) [2251 B] 119s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (tar) [109 kB] 119s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-hdmedians 0.14.2-5.1build1 (diff) [3660 B] 120s gpgv: Signature made Wed Apr 10 18:32:59 2024 UTC 120s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 120s gpgv: Can't check signature: No public key 120s dpkg-source: warning: cannot verify inline signature for ./python-hdmedians_0.14.2-5.1build1.dsc: no acceptable signature found 120s autopkgtest [14:52:27]: testing package python-hdmedians version 0.14.2-5.1build1 120s autopkgtest [14:52:27]: build not needed 120s autopkgtest [14:52:27]: test run-unit-test: preparing testbed 123s Reading package lists... 123s Building dependency tree... 123s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 124s The following additional packages will be installed: 124s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 124s python3-all python3-hdmedians python3-iniconfig python3-numpy 124s python3-packaging python3-pluggy python3-pytest python3.13 124s python3.13-minimal 124s Suggested packages: 124s gcc gfortran python-numpy-doc python3-dev python3.13-venv python3.13-doc 124s binfmt-support 124s The following NEW packages will be installed: 124s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 124s libpython3.13-stdlib python3-all python3-hdmedians python3-iniconfig 124s python3-numpy python3-packaging python3-pluggy python3-pytest python3.13 124s python3.13-minimal 124s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 124s Need to get 14.2 MB/14.2 MB of archives. 124s After this operation, 56.6 MB of additional disk space will be used. 124s Get:1 /tmp/autopkgtest.wpL2Vv/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B] 124s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 124s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 124s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 124s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 124s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 125s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 125s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 125s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B] 125s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 125s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-hdmedians s390x 0.14.2-5.1build1 [129 kB] 125s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 125s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB] 125s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 125s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 125s Fetched 14.2 MB in 1s (12.8 MB/s) 125s Selecting previously unselected package libpython3.13-minimal:s390x. 125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 125s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_s390x.deb ... 125s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 125s Selecting previously unselected package python3.13-minimal. 125s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_s390x.deb ... 125s Unpacking python3.13-minimal (3.13.0-2) ... 125s Selecting previously unselected package libblas3:s390x. 125s Preparing to unpack .../02-libblas3_3.12.0-3build2_s390x.deb ... 125s Unpacking libblas3:s390x (3.12.0-3build2) ... 125s Selecting previously unselected package libgfortran5:s390x. 125s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 125s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 125s Selecting previously unselected package liblapack3:s390x. 125s Preparing to unpack .../04-liblapack3_3.12.0-3build2_s390x.deb ... 125s Unpacking liblapack3:s390x (3.12.0-3build2) ... 125s Selecting previously unselected package libpython3.13-stdlib:s390x. 125s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 125s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 125s Selecting previously unselected package python3.13. 125s Preparing to unpack .../06-python3.13_3.13.0-2_s390x.deb ... 125s Unpacking python3.13 (3.13.0-2) ... 125s Selecting previously unselected package python3-all. 125s Preparing to unpack .../07-python3-all_3.12.7-1_s390x.deb ... 125s Unpacking python3-all (3.12.7-1) ... 125s Selecting previously unselected package python3-numpy. 125s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 125s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 125s Selecting previously unselected package python3-hdmedians. 125s Preparing to unpack .../09-python3-hdmedians_0.14.2-5.1build1_s390x.deb ... 125s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 125s Selecting previously unselected package python3-iniconfig. 125s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 125s Unpacking python3-iniconfig (1.1.1-2) ... 125s Selecting previously unselected package python3-packaging. 125s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 125s Unpacking python3-packaging (24.1-1) ... 125s Selecting previously unselected package python3-pluggy. 125s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 125s Unpacking python3-pluggy (1.5.0-1) ... 125s Selecting previously unselected package python3-pytest. 125s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 125s Unpacking python3-pytest (8.3.3-1) ... 125s Selecting previously unselected package autopkgtest-satdep. 125s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 125s Unpacking autopkgtest-satdep (0) ... 125s Setting up python3-iniconfig (1.1.1-2) ... 126s Setting up libpython3.13-minimal:s390x (3.13.0-2) ... 126s Setting up libblas3:s390x (3.12.0-3build2) ... 126s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 126s Setting up python3-packaging (24.1-1) ... 126s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 126s Setting up python3-pluggy (1.5.0-1) ... 126s Setting up python3.13-minimal (3.13.0-2) ... 127s Setting up libpython3.13-stdlib:s390x (3.13.0-2) ... 127s Setting up liblapack3:s390x (3.12.0-3build2) ... 127s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 127s Setting up python3.13 (3.13.0-2) ... 128s Setting up python3-pytest (8.3.3-1) ... 128s Setting up python3-all (3.12.7-1) ... 128s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 133s Setting up python3-hdmedians (0.14.2-5.1build1) ... 133s Setting up autopkgtest-satdep (0) ... 133s Processing triggers for systemd (256.5-2ubuntu4) ... 133s Processing triggers for man-db (2.12.1-3) ... 133s Processing triggers for libc-bin (2.40-1ubuntu3) ... 135s (Reading database ... 57333 files and directories currently installed.) 135s Removing autopkgtest-satdep (0) ... 135s autopkgtest [14:52:42]: test run-unit-test: [----------------------- 135s Testing with python3.13 in /tmp/autopkgtest.wpL2Vv/autopkgtest_tmp: 136s ============================= test session starts ============================== 136s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 136s cachedir: .pytest_cache 136s rootdir: /tmp/autopkgtest.wpL2Vv/autopkgtest_tmp 136s plugins: typeguard-4.4.1 136s collecting ... collected 0 items / 2 errors 136s 136s ==================================== ERRORS ==================================== 136s ______________________ ERROR collecting test_geomedian.py ______________________ 136s ImportError while importing test module '/tmp/autopkgtest.wpL2Vv/autopkgtest_tmp/test_geomedian.py'. 136s Hint: make sure your test modules/packages have valid Python names. 136s Traceback: 136s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 136s from . import multiarray 136s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 136s from . import overrides 136s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 136s from numpy.core._multiarray_umath import ( 136s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 136s 136s During handling of the above exception, another exception occurred: 136s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 136s from numpy.__config__ import show as show_config 136s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 136s from numpy.core._multiarray_umath import ( 136s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 136s raise ImportError(msg) 136s E ImportError: 136s E 136s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 136s E 136s E Importing the numpy C-extensions failed. This error can happen for 136s E many reasons, often due to issues with your setup or how NumPy was 136s E installed. 136s E 136s E We have compiled some common reasons and troubleshooting tips at: 136s E 136s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 136s E 136s E Please note and check the following: 136s E 136s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 136s E * The NumPy version is: "1.26.4" 136s E 136s E and make sure that they are the versions you expect. 136s E Please carefully study the documentation linked above for further help. 136s E 136s E Original error was: No module named 'numpy.core._multiarray_umath' 136s 136s The above exception was the direct cause of the following exception: 136s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 136s return _bootstrap._gcd_import(name[level:], package, level) 136s test_geomedian.py:5: in 136s import numpy as np 136s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 136s raise ImportError(msg) from e 136s E ImportError: Error importing numpy: you should not try to import numpy from 136s E its source directory; please exit the numpy source tree, and relaunch 136s E your python interpreter from there. 136s _______________________ ERROR collecting test_medoid.py ________________________ 136s ImportError while importing test module '/tmp/autopkgtest.wpL2Vv/autopkgtest_tmp/test_medoid.py'. 136s Hint: make sure your test modules/packages have valid Python names. 136s Traceback: 136s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 136s from . import multiarray 136s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 136s from . import overrides 136s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 136s from numpy.core._multiarray_umath import ( 136s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 136s 136s During handling of the above exception, another exception occurred: 136s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 136s from numpy.__config__ import show as show_config 136s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 136s from numpy.core._multiarray_umath import ( 136s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 136s raise ImportError(msg) 136s E ImportError: 136s E 136s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 136s E 136s E Importing the numpy C-extensions failed. This error can happen for 136s E many reasons, often due to issues with your setup or how NumPy was 136s E installed. 136s E 136s E We have compiled some common reasons and troubleshooting tips at: 136s E 136s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 136s E 136s E Please note and check the following: 136s E 136s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 136s E * The NumPy version is: "1.26.4" 136s E 136s E and make sure that they are the versions you expect. 136s E Please carefully study the documentation linked above for further help. 136s E 136s E Original error was: No module named 'numpy.core._multiarray_umath' 136s 136s The above exception was the direct cause of the following exception: 136s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 136s return _bootstrap._gcd_import(name[level:], package, level) 136s test_medoid.py:5: in 136s import numpy as np 136s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 136s raise ImportError(msg) from e 136s E ImportError: Error importing numpy: you should not try to import numpy from 136s E its source directory; please exit the numpy source tree, and relaunch 136s E your python interpreter from there. 136s =========================== short test summary info ============================ 136s ERROR test_geomedian.py 136s ERROR test_medoid.py 136s !!!!!!!!!!!!!!!!!!! Interrupted: 2 errors during collection !!!!!!!!!!!!!!!!!!!! 136s ============================== 2 errors in 0.12s =============================== 136s autopkgtest [14:52:43]: test run-unit-test: -----------------------] 137s autopkgtest [14:52:44]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 137s run-unit-test FAIL non-zero exit status 2 137s autopkgtest [14:52:44]: test autodep8-python3: preparing testbed 262s autopkgtest [14:54:49]: testbed dpkg architecture: s390x 262s autopkgtest [14:54:49]: testbed apt version: 2.9.8 262s autopkgtest [14:54:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 263s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 263s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.5 kB] 263s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 263s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 263s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [962 kB] 263s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [110 kB] 263s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [639 kB] 263s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [17.4 kB] 264s Fetched 1931 kB in 1s (2354 kB/s) 264s Reading package lists... 266s Reading package lists... 266s Building dependency tree... 266s Reading state information... 266s Calculating upgrade... 266s The following NEW packages will be installed: 266s python3.13-gdbm 266s The following packages will be upgraded: 266s libgnutls30t64 libgpgme11t64 libjson-glib-1.0-0 libjson-glib-1.0-common 266s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 266s 9 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 266s Need to get 1285 kB of archives. 266s After this operation, 103 kB of additional disk space will be used. 266s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB] 266s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB] 266s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB] 266s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls30t64 s390x 3.8.8-2ubuntu1 [950 kB] 267s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 267s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 267s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB] 267s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 267s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-glib-1.0-0 s390x 1.10.0+ds-3 [67.5 kB] 267s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libutempter0 s390x 1.2.1-4 [9708 B] 267s Fetched 1285 kB in 1s (2156 kB/s) 267s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 267s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ... 267s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 267s Setting up python3-minimal (3.12.7-1) ... 267s (Reading database ... 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... 268s Preparing to unpack .../3-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 268s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 268s Preparing to unpack .../4-libjson-glib-1.0-0_1.10.0+ds-3_s390x.deb ... 268s Unpacking libjson-glib-1.0-0:s390x (1.10.0+ds-3) over (1.10.0+ds-2) ... 268s Preparing to unpack .../5-libutempter0_1.2.1-4_s390x.deb ... 268s Unpacking libutempter0:s390x (1.2.1-4) over (1.2.1-3build1) ... 268s Setting up libutempter0:s390x (1.2.1-4) ... 268s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 268s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ... 268s Setting up python3.13-gdbm (3.13.0-2) ... 268s Setting up libpython3-stdlib:s390x (3.12.7-1) ... 268s Setting up python3 (3.12.7-1) ... 268s Setting up libjson-glib-1.0-0:s390x (1.10.0+ds-3) ... 268s Setting up python3-gdbm:s390x (3.12.7-1) ... 268s Processing triggers for man-db (2.12.1-3) ... 268s Processing triggers for libc-bin (2.40-1ubuntu3) ... 268s Reading package lists... 268s Building dependency tree... 268s Reading state information... 268s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 269s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 269s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 269s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 269s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 269s Reading package lists... 269s Reading package lists... 269s Building dependency tree... 269s Reading state information... 270s Calculating upgrade... 270s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 270s Reading package lists... 270s Building dependency tree... 270s Reading state information... 270s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 274s Reading package lists... 274s Building dependency tree... 274s Reading state information... 274s Starting pkgProblemResolver with broken count: 0 274s Starting 2 pkgProblemResolver with broken count: 0 274s Done 274s The following additional packages will be installed: 274s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 274s python3-all python3-hdmedians python3-numpy python3.13 python3.13-minimal 274s Suggested packages: 274s gcc gfortran python-numpy-doc python3-dev python3-pytest python3.13-venv 274s python3.13-doc binfmt-support 274s The following NEW packages will be installed: 274s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 274s libpython3.13-stdlib python3-all python3-hdmedians python3-numpy python3.13 274s python3.13-minimal 274s 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. 274s Need to get 13.9 MB/13.9 MB of archives. 274s After this operation, 55.0 MB of additional disk space will be used. 274s Get:1 /tmp/autopkgtest.wpL2Vv/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [720 B] 274s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 275s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 275s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 275s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 275s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 275s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 275s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 275s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B] 275s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 275s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-hdmedians s390x 0.14.2-5.1build1 [129 kB] 276s Fetched 13.9 MB in 1s (10.8 MB/s) 276s Selecting previously unselected package libpython3.13-minimal:s390x. 276s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 276s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_s390x.deb ... 276s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 276s Selecting previously unselected package python3.13-minimal. 276s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_s390x.deb ... 276s Unpacking python3.13-minimal (3.13.0-2) ... 276s Selecting previously unselected package libblas3:s390x. 276s Preparing to unpack .../02-libblas3_3.12.0-3build2_s390x.deb ... 276s Unpacking libblas3:s390x (3.12.0-3build2) ... 276s Selecting previously unselected package libgfortran5:s390x. 276s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 276s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 276s Selecting previously unselected package liblapack3:s390x. 276s Preparing to unpack .../04-liblapack3_3.12.0-3build2_s390x.deb ... 276s Unpacking liblapack3:s390x (3.12.0-3build2) ... 276s Selecting previously unselected package libpython3.13-stdlib:s390x. 276s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 276s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 276s Selecting previously unselected package python3.13. 276s Preparing to unpack .../06-python3.13_3.13.0-2_s390x.deb ... 276s Unpacking python3.13 (3.13.0-2) ... 276s Selecting previously unselected package python3-all. 276s Preparing to unpack .../07-python3-all_3.12.7-1_s390x.deb ... 276s Unpacking python3-all (3.12.7-1) ... 276s Selecting previously unselected package python3-numpy. 276s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 276s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 276s Selecting previously unselected package python3-hdmedians. 276s Preparing to unpack .../09-python3-hdmedians_0.14.2-5.1build1_s390x.deb ... 276s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 276s Selecting previously unselected package autopkgtest-satdep. 276s Preparing to unpack .../10-2-autopkgtest-satdep.deb ... 276s Unpacking autopkgtest-satdep (0) ... 276s Setting up libpython3.13-minimal:s390x (3.13.0-2) ... 276s Setting up libblas3:s390x (3.12.0-3build2) ... 276s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 276s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 276s Setting up python3.13-minimal (3.13.0-2) ... 277s Setting up libpython3.13-stdlib:s390x (3.13.0-2) ... 277s Setting up liblapack3:s390x (3.12.0-3build2) ... 277s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 277s Setting up python3.13 (3.13.0-2) ... 278s Setting up python3-all (3.12.7-1) ... 278s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 281s Setting up python3-hdmedians (0.14.2-5.1build1) ... 282s Setting up autopkgtest-satdep (0) ... 282s Processing triggers for systemd (256.5-2ubuntu4) ... 282s Processing triggers for man-db (2.12.1-3) ... 282s Processing triggers for libc-bin (2.40-1ubuntu3) ... 283s (Reading database ... 57169 files and directories currently installed.) 283s Removing autopkgtest-satdep (0) ... 285s autopkgtest [14:55:12]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import hdmedians; print(hdmedians)" ; done 285s autopkgtest [14:55:12]: test autodep8-python3: [----------------------- 285s Testing with python3.13: 285s Traceback (most recent call last): 285s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 285s from . import multiarray 285s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 285s from . import overrides 285s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 285s from numpy.core._multiarray_umath import ( 285s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 285s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 285s 285s During handling of the above exception, another exception occurred: 285s 285s Traceback (most recent call last): 285s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 285s from numpy.__config__ import show as show_config 285s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 285s from numpy.core._multiarray_umath import ( 285s ...<3 lines>... 285s ) 285s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 285s raise ImportError(msg) 285s ImportError: 285s 285s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 285s 285s Importing the numpy C-extensions failed. This error can happen for 285s many reasons, often due to issues with your setup or how NumPy was 285s installed. 285s 285s We have compiled some common reasons and troubleshooting tips at: 285s 285s https://numpy.org/devdocs/user/troubleshooting-importerror.html 285s 285s Please note and check the following: 285s 285s * The Python version is: Python3.13 from "/usr/bin/python3.13" 285s * The NumPy version is: "1.26.4" 285s 285s and make sure that they are the versions you expect. 285s Please carefully study the documentation linked above for further help. 285s 285s Original error was: No module named 'numpy.core._multiarray_umath' 285s 285s 285s The above exception was the direct cause of the following exception: 285s 285s Traceback (most recent call last): 285s File "", line 1, in 285s import hdmedians; print(hdmedians) 285s ^^^^^^^^^^^^^^^^ 285s File "/usr/lib/python3/dist-packages/hdmedians/__init__.py", line 5, in 285s from .medoid import medoid, nanmedoid 285s File "/usr/lib/python3/dist-packages/hdmedians/medoid.py", line 6, in 285s import numpy as np 285s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 285s raise ImportError(msg) from e 285s ImportError: Error importing numpy: you should not try to import numpy from 285s its source directory; please exit the numpy source tree, and relaunch 285s your python interpreter from there. 285s autopkgtest [14:55:12]: test autodep8-python3: -----------------------] 286s autopkgtest [14:55:13]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 286s autodep8-python3 FAIL non-zero exit status 1 286s autopkgtest [14:55:13]: @@@@@@@@@@@@@@@@@@@@ summary 286s run-unit-test FAIL non-zero exit status 2 286s autodep8-python3 FAIL non-zero exit status 1 298s nova [W] Using flock in prodstack6-s390x 298s flock: timeout while waiting to get lock 298s Creating nova instance adt-plucky-s390x-python-hdmedians-20241113-145026-juju-7f2275-prod-proposed-migration-environment-15-be596dac-988a-46a4-999a-57147f10a547 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)... 298s nova [W] Using flock in prodstack6-s390x 298s Creating nova instance adt-plucky-s390x-python-hdmedians-20241113-145026-juju-7f2275-prod-proposed-migration-environment-15-be596dac-988a-46a4-999a-57147f10a547 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)...