0s autopkgtest [11:24:50]: starting date and time: 2025-01-08 11:24:50+0000 0s autopkgtest [11:24:50]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [11:24:50]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.tmpd83hc/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade python-cai --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.1.3-4 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-17.secgroup --name adt-plucky-s390x-python-cai-20250108-112450-juju-7f2275-prod-proposed-migration-environment-20-b7e8f2ca-3b89-4e6f-b54b-f90c2dbd206b --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 51s autopkgtest [11:25:41]: testbed dpkg architecture: s390x 51s autopkgtest [11:25:41]: testbed apt version: 2.9.18 51s autopkgtest [11:25:41]: @@@@@@@@@@@@@@@@@@@@ test bed setup 51s autopkgtest [11:25:41]: testbed release detected to be: None 52s autopkgtest [11:25:42]: updating testbed package index (apt update) 52s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 52s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 53s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 53s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 53s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [129 kB] 53s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [818 kB] 53s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.3 kB] 53s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 53s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [235 kB] 53s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [756 B] 53s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [913 kB] 53s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [5576 B] 53s Fetched 2201 kB in 1s (2320 kB/s) 54s Reading package lists... 54s Reading package lists... 54s Building dependency tree... 54s Reading state information... 54s Calculating upgrade... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s autopkgtest [11:25:45]: upgrading testbed (apt dist-upgrade and autopurge) 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 55s Starting 2 pkgProblemResolver with broken count: 0 55s Done 56s Entering ResolveByKeep 56s 56s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Starting pkgProblemResolver with broken count: 0 56s Starting 2 pkgProblemResolver with broken count: 0 56s Done 56s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest [11:25:49]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 59s autopkgtest [11:25:49]: @@@@@@@@@@@@@@@@@@@@ apt-source python-cai 61s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (dsc) [2421 B] 61s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (tar) [1379 kB] 61s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (diff) [3852 B] 61s gpgv: Signature made Thu Dec 26 14:52:26 2024 UTC 61s gpgv: using RSA key AC0A4FF12611B6FCCF01C111393587D97D86500B 61s gpgv: Can't check signature: No public key 61s dpkg-source: warning: cannot verify inline signature for ./python-cai_1.0.2-5.dsc: no acceptable signature found 61s autopkgtest [11:25:51]: testing package python-cai version 1.0.2-5 62s autopkgtest [11:25:52]: build not needed 62s autopkgtest [11:25:52]: test command1: preparing testbed 62s Reading package lists... 63s Building dependency tree... 63s Reading state information... 63s Starting pkgProblemResolver with broken count: 0 63s Starting 2 pkgProblemResolver with broken count: 0 63s Done 63s The following NEW packages will be installed: 63s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 63s libblas3 libcairo2 libdeflate0 libfontconfig1 libfontenc1 libfreetype6 63s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 63s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore 63s liblapack3 liblbfgsb0 liblcms2-2 libopenjp2-7 libpixman-1-0 libraqm0 63s libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 63s libxcb-shm0 libxrender1 python-cai-doc python3-biopython python3-cai 63s python3-cairo python3-click python3-colorama python3-decorator 63s python3-freetype python3-iniconfig python3-numpy python3-packaging 63s python3-pil python3-pluggy python3-pytest python3-reportlab 63s python3-rlpycairo python3-scipy sgml-base w3c-sgml-lib x11-common 63s xfonts-encodings xfonts-utils xml-core 63s 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded. 63s Need to get 50.8 MB of archives. 63s After this operation, 211 MB of additional disk space will be used. 63s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x sgml-base all 1.31 [11.4 kB] 63s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 64s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 64s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 64s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 64s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 64s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 64s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 64s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 69s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 69s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB] 69s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 69s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 69s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 69s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 69s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 69s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 70s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 70s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-12ubuntu1 [587 kB] 70s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-12ubuntu1 [151 kB] 70s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 70s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.1.0-1 [537 kB] 70s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 70s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 70s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 70s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 70s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 70s Get:28 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libjs-sphinxdoc all 8.1.3-4 [30.9 kB] 70s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB] 72s Get:30 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 72s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 72s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.2-1 [15.8 kB] 72s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 72s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 72s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 72s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 72s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB] 72s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB] 72s Get:39 http://ftpmaster.internal/ubuntu plucky/universe s390x python-cai-doc all 1.0.2-5 [26.0 kB] 72s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-12 [4601 kB] 73s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu2 [208 kB] 73s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu2 [515 kB] 74s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cairo s390x 1.26.1-2build1 [138 kB] 74s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 74s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 74s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-reportlab all 4.2.5-1 [1107 kB] 74s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x xml-core all 0.19 [20.3 kB] 74s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 74s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-biopython s390x 1.84+dfsg-4build1 [1728 kB] 75s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x python3-colorama all 0.4.6-4 [32.1 kB] 75s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x python3-click all 8.1.7-2 [79.5 kB] 75s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 75s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.14.1-3ubuntu1 [21.2 MB] 77s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cai all 1.0.2-5 [8434 B] 77s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 77s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.2-1 [51.5 kB] 77s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 77s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 77s Fetched 50.8 MB in 14s (3621 kB/s) 77s Selecting previously unselected package sgml-base. 77s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55616 files and directories currently installed.) 77s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 77s Unpacking sgml-base (1.31) ... 77s Selecting previously unselected package fonts-dejavu-mono. 77s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 77s Unpacking fonts-dejavu-mono (2.37-8) ... 77s Selecting previously unselected package fonts-dejavu-core. 77s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 78s Unpacking fonts-dejavu-core (2.37-8) ... 78s Selecting previously unselected package libfontenc1:s390x. 78s Preparing to unpack .../03-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 78s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 78s Selecting previously unselected package libfreetype6:s390x. 78s Preparing to unpack .../04-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 78s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 78s Selecting previously unselected package x11-common. 78s Preparing to unpack .../05-x11-common_1%3a7.7+23ubuntu3_all.deb ... 78s Unpacking x11-common (1:7.7+23ubuntu3) ... 78s Selecting previously unselected package xfonts-encodings. 78s Preparing to unpack .../06-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 78s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 78s Selecting previously unselected package xfonts-utils. 78s Preparing to unpack .../07-xfonts-utils_1%3a7.7+7_s390x.deb ... 78s Unpacking xfonts-utils (1:7.7+7) ... 78s Selecting previously unselected package fonts-urw-base35. 78s Preparing to unpack .../08-fonts-urw-base35_20200910-8_all.deb ... 78s Unpacking fonts-urw-base35 (20200910-8) ... 78s Selecting previously unselected package fontconfig-config. 78s Preparing to unpack .../09-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 78s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 78s Selecting previously unselected package libblas3:s390x. 78s Preparing to unpack .../10-libblas3_3.12.0-4_s390x.deb ... 78s Unpacking libblas3:s390x (3.12.0-4) ... 78s Selecting previously unselected package libfontconfig1:s390x. 78s Preparing to unpack .../11-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 78s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 78s Selecting previously unselected package libpixman-1-0:s390x. 78s Preparing to unpack .../12-libpixman-1-0_0.44.0-3_s390x.deb ... 78s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 78s Selecting previously unselected package libxcb-render0:s390x. 78s Preparing to unpack .../13-libxcb-render0_1.17.0-2_s390x.deb ... 78s Unpacking libxcb-render0:s390x (1.17.0-2) ... 78s Selecting previously unselected package libxcb-shm0:s390x. 78s Preparing to unpack .../14-libxcb-shm0_1.17.0-2_s390x.deb ... 78s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 78s Selecting previously unselected package libxrender1:s390x. 78s Preparing to unpack .../15-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 78s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 78s Selecting previously unselected package libcairo2:s390x. 78s Preparing to unpack .../16-libcairo2_1.18.2-2_s390x.deb ... 78s Unpacking libcairo2:s390x (1.18.2-2) ... 78s Selecting previously unselected package libdeflate0:s390x. 78s Preparing to unpack .../17-libdeflate0_1.22-1_s390x.deb ... 78s Unpacking libdeflate0:s390x (1.22-1) ... 78s Selecting previously unselected package libgfortran5:s390x. 78s Preparing to unpack .../18-libgfortran5_14.2.0-12ubuntu1_s390x.deb ... 78s Unpacking libgfortran5:s390x (14.2.0-12ubuntu1) ... 78s Selecting previously unselected package libgomp1:s390x. 78s Preparing to unpack .../19-libgomp1_14.2.0-12ubuntu1_s390x.deb ... 78s Unpacking libgomp1:s390x (14.2.0-12ubuntu1) ... 78s Selecting previously unselected package libgraphite2-3:s390x. 78s Preparing to unpack .../20-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 78s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 78s Selecting previously unselected package libharfbuzz0b:s390x. 78s Preparing to unpack .../21-libharfbuzz0b_10.1.0-1_s390x.deb ... 78s Unpacking libharfbuzz0b:s390x (10.1.0-1) ... 78s Selecting previously unselected package libimagequant0:s390x. 78s Preparing to unpack .../22-libimagequant0_2.18.0-1build1_s390x.deb ... 78s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 78s Selecting previously unselected package libjpeg-turbo8:s390x. 78s Preparing to unpack .../23-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 78s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 78s Selecting previously unselected package libjpeg8:s390x. 78s Preparing to unpack .../24-libjpeg8_8c-2ubuntu11_s390x.deb ... 78s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 78s Selecting previously unselected package libjs-jquery. 78s Preparing to unpack .../25-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 78s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 78s Selecting previously unselected package libjs-underscore. 78s Preparing to unpack .../26-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 78s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 78s Selecting previously unselected package libjs-sphinxdoc. 78s Preparing to unpack .../27-libjs-sphinxdoc_8.1.3-4_all.deb ... 78s Unpacking libjs-sphinxdoc (8.1.3-4) ... 78s Selecting previously unselected package liblapack3:s390x. 78s Preparing to unpack .../28-liblapack3_3.12.0-4_s390x.deb ... 78s Unpacking liblapack3:s390x (3.12.0-4) ... 78s Selecting previously unselected package liblbfgsb0:s390x. 78s Preparing to unpack .../29-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 78s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 78s Selecting previously unselected package liblcms2-2:s390x. 78s Preparing to unpack .../30-liblcms2-2_2.16-2_s390x.deb ... 78s Unpacking liblcms2-2:s390x (2.16-2) ... 78s Selecting previously unselected package libraqm0:s390x. 78s Preparing to unpack .../31-libraqm0_0.10.2-1_s390x.deb ... 78s Unpacking libraqm0:s390x (0.10.2-1) ... 78s Selecting previously unselected package libsharpyuv0:s390x. 78s Preparing to unpack .../32-libsharpyuv0_1.4.0-0.1_s390x.deb ... 78s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 78s Selecting previously unselected package libjbig0:s390x. 78s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 78s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 78s Selecting previously unselected package libwebp7:s390x. 78s Preparing to unpack .../34-libwebp7_1.4.0-0.1_s390x.deb ... 78s Unpacking libwebp7:s390x (1.4.0-0.1) ... 78s Selecting previously unselected package libtiff6:s390x. 78s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 78s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 78s Selecting previously unselected package libwebpdemux2:s390x. 78s Preparing to unpack .../36-libwebpdemux2_1.4.0-0.1_s390x.deb ... 78s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ... 78s Selecting previously unselected package libwebpmux3:s390x. 78s Preparing to unpack .../37-libwebpmux3_1.4.0-0.1_s390x.deb ... 78s Unpacking libwebpmux3:s390x (1.4.0-0.1) ... 78s Selecting previously unselected package python-cai-doc. 78s Preparing to unpack .../38-python-cai-doc_1.0.2-5_all.deb ... 78s Unpacking python-cai-doc (1.0.2-5) ... 78s Selecting previously unselected package python3-numpy. 78s Preparing to unpack .../39-python3-numpy_1%3a1.26.4+ds-12_s390x.deb ... 78s Unpacking python3-numpy (1:1.26.4+ds-12) ... 78s Selecting previously unselected package libopenjp2-7:s390x. 78s Preparing to unpack .../40-libopenjp2-7_2.5.0-2ubuntu2_s390x.deb ... 78s Unpacking libopenjp2-7:s390x (2.5.0-2ubuntu2) ... 78s Selecting previously unselected package python3-pil:s390x. 78s Preparing to unpack .../41-python3-pil_10.4.0-1ubuntu2_s390x.deb ... 78s Unpacking python3-pil:s390x (10.4.0-1ubuntu2) ... 78s Selecting previously unselected package python3-cairo. 78s Preparing to unpack .../42-python3-cairo_1.26.1-2build1_s390x.deb ... 78s Unpacking python3-cairo (1.26.1-2build1) ... 78s Selecting previously unselected package python3-freetype. 78s Preparing to unpack .../43-python3-freetype_2.5.1-1_all.deb ... 78s Unpacking python3-freetype (2.5.1-1) ... 78s Selecting previously unselected package python3-rlpycairo. 78s Preparing to unpack .../44-python3-rlpycairo_0.3.0-3_all.deb ... 78s Unpacking python3-rlpycairo (0.3.0-3) ... 78s Selecting previously unselected package python3-reportlab. 78s Preparing to unpack .../45-python3-reportlab_4.2.5-1_all.deb ... 78s Unpacking python3-reportlab (4.2.5-1) ... 79s Selecting previously unselected package xml-core. 79s Preparing to unpack .../46-xml-core_0.19_all.deb ... 79s Unpacking xml-core (0.19) ... 79s Selecting previously unselected package w3c-sgml-lib. 79s Preparing to unpack .../47-w3c-sgml-lib_1.3-3_all.deb ... 79s Unpacking w3c-sgml-lib (1.3-3) ... 79s Selecting previously unselected package python3-biopython. 79s Preparing to unpack .../48-python3-biopython_1.84+dfsg-4build1_s390x.deb ... 79s Unpacking python3-biopython (1.84+dfsg-4build1) ... 79s Selecting previously unselected package python3-colorama. 79s Preparing to unpack .../49-python3-colorama_0.4.6-4_all.deb ... 79s Unpacking python3-colorama (0.4.6-4) ... 79s Selecting previously unselected package python3-click. 79s Preparing to unpack .../50-python3-click_8.1.7-2_all.deb ... 79s Unpacking python3-click (8.1.7-2) ... 79s Selecting previously unselected package python3-decorator. 79s Preparing to unpack .../51-python3-decorator_5.1.1-5_all.deb ... 79s Unpacking python3-decorator (5.1.1-5) ... 79s Selecting previously unselected package python3-scipy. 79s Preparing to unpack .../52-python3-scipy_1.14.1-3ubuntu1_s390x.deb ... 79s Unpacking python3-scipy (1.14.1-3ubuntu1) ... 79s Selecting previously unselected package python3-cai. 79s Preparing to unpack .../53-python3-cai_1.0.2-5_all.deb ... 79s Unpacking python3-cai (1.0.2-5) ... 79s Selecting previously unselected package python3-iniconfig. 79s Preparing to unpack .../54-python3-iniconfig_1.1.1-2_all.deb ... 79s Unpacking python3-iniconfig (1.1.1-2) ... 79s Selecting previously unselected package python3-packaging. 79s Preparing to unpack .../55-python3-packaging_24.2-1_all.deb ... 79s Unpacking python3-packaging (24.2-1) ... 79s Selecting previously unselected package python3-pluggy. 79s Preparing to unpack .../56-python3-pluggy_1.5.0-1_all.deb ... 79s Unpacking python3-pluggy (1.5.0-1) ... 79s Selecting previously unselected package python3-pytest. 79s Preparing to unpack .../57-python3-pytest_8.3.3-1_all.deb ... 79s Unpacking python3-pytest (8.3.3-1) ... 79s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 79s Setting up liblcms2-2:s390x (2.16-2) ... 79s Setting up python3-iniconfig (1.1.1-2) ... 79s Setting up libpixman-1-0:s390x (0.44.0-3) ... 79s Setting up libsharpyuv0:s390x (1.4.0-0.1) ... 79s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 79s Setting up python3-colorama (0.4.6-4) ... 79s Setting up libxcb-render0:s390x (1.17.0-2) ... 79s Setting up x11-common (1:7.7+23ubuntu3) ... 80s Setting up libdeflate0:s390x (1.22-1) ... 80s Setting up libxcb-shm0:s390x (1.17.0-2) ... 80s Setting up libgomp1:s390x (14.2.0-12ubuntu1) ... 80s Setting up python3-click (8.1.7-2) ... 80s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 80s Setting up python3-decorator (5.1.1-5) ... 80s Setting up libfontenc1:s390x (1:1.1.8-1build1) ... 80s Setting up libblas3:s390x (3.12.0-4) ... 80s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 80s Setting up python3-packaging (24.2-1) ... 80s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 80s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 80s Setting up libimagequant0:s390x (2.18.0-1build1) ... 80s Setting up fonts-dejavu-mono (2.37-8) ... 80s Setting up fonts-dejavu-core (2.37-8) ... 80s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 80s Setting up libgfortran5:s390x (14.2.0-12ubuntu1) ... 80s Setting up python3-pluggy (1.5.0-1) ... 80s Setting up libwebp7:s390x (1.4.0-0.1) ... 80s Setting up libopenjp2-7:s390x (2.5.0-2ubuntu2) ... 80s Setting up libharfbuzz0b:s390x (10.1.0-1) ... 80s Setting up sgml-base (1.31) ... 80s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 80s Setting up libwebpmux3:s390x (1.4.0-0.1) ... 80s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 80s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 80s Setting up liblapack3:s390x (3.12.0-4) ... 80s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 80s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 80s Setting up python3-pytest (8.3.3-1) ... 81s Setting up libwebpdemux2:s390x (1.4.0-0.1) ... 81s Setting up python3-freetype (2.5.1-1) ... 81s Setting up xfonts-utils (1:7.7+7) ... 81s Setting up libraqm0:s390x (0.10.2-1) ... 81s Setting up python3-numpy (1:1.26.4+ds-12) ... 83s Setting up libjs-sphinxdoc (8.1.3-4) ... 83s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 83s Setting up xml-core (0.19) ... 83s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 83s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 83s Setting up python3-scipy (1.14.1-3ubuntu1) ... 86s Setting up python-cai-doc (1.0.2-5) ... 86s Setting up fonts-urw-base35 (20200910-8) ... 87s Setting up libcairo2:s390x (1.18.2-2) ... 87s Setting up python3-pil:s390x (10.4.0-1ubuntu2) ... 87s Setting up python3-cairo (1.26.1-2build1) ... 87s Setting up python3-rlpycairo (0.3.0-3) ... 88s Setting up python3-reportlab (4.2.5-1) ... 88s Processing triggers for libc-bin (2.40-4ubuntu1) ... 88s Processing triggers for man-db (2.13.0-1) ... 89s Processing triggers for sgml-base (1.31) ... 89s Setting up w3c-sgml-lib (1.3-3) ... 109s Setting up python3-biopython (1.84+dfsg-4build1) ... 110s Setting up python3-cai (1.0.2-5) ... 111s autopkgtest [11:26:41]: test command1: pytest-3 111s autopkgtest [11:26:41]: test command1: [----------------------- 112s ============================= test session starts ============================== 112s platform linux -- Python 3.12.8, pytest-8.3.3, pluggy-1.5.0 112s rootdir: /tmp/autopkgtest.A3N5q2/build.i75/src 112s plugins: typeguard-4.4.1 112s collected 15 items 112s 112s tests/test_cai.py ..... [ 33%] 112s tests/test_relative_adaptiveness.py .... [ 60%] 112s tests/test_rscu.py ...... [100%] 112s 112s =============================== warnings summary =============================== 112s tests/test_cai.py::test_only_non_synonymous 112s /usr/lib/python3/dist-packages/CAI/CAI.py:213: SmallSampleWarning: One or more sample arguments is too small; all returned values will be NaN. See documentation for sample size requirements. 112s return float(gmean(sequence_weights)) 112s 112s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 112s ======================== 15 passed, 1 warning in 0.38s ========================= 112s autopkgtest [11:26:42]: test command1: -----------------------] 113s autopkgtest [11:26:43]: test command1: - - - - - - - - - - results - - - - - - - - - - 113s command1 PASS 113s autopkgtest [11:26:43]: @@@@@@@@@@@@@@@@@@@@ summary 113s command1 PASS 130s nova [W] Using flock in prodstack6-s390x 130s Creating nova instance adt-plucky-s390x-python-cai-20250108-112450-juju-7f2275-prod-proposed-migration-environment-20-b7e8f2ca-3b89-4e6f-b54b-f90c2dbd206b from image adt/ubuntu-plucky-s390x-server-20250108.img (UUID 1b305a85-9036-4003-b130-4539b3c95093)... 130s nova [W] Timed out waiting for 7ad66aaf-5794-4f2a-b5f2-afa9e499be3f to get deleted.