0s autopkgtest [16:30:44]: starting date and time: 2024-11-14 16:30:44+0000
  0s autopkgtest [16:30:44]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [16:30:44]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.r07wzoey/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade pybigwig --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:1.26.4+ds-11ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-4.secgroup --name adt-plucky-s390x-pybigwig-20241114-163044-juju-7f2275-prod-proposed-migration-environment-20-3c2136eb-dbb6-4c47-9ad5-223337da3fb2 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
103s autopkgtest [16:32:27]: testbed dpkg architecture: s390x
104s autopkgtest [16:32:28]: testbed apt version: 2.9.8
104s autopkgtest [16:32:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup
104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.6 kB]
105s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [951 kB]
105s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB]
105s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [117 kB]
105s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [674 kB]
105s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [5020 B]
105s Fetched 1947 kB in 1s (2425 kB/s)
105s Reading package lists...
107s Reading package lists...
107s Building dependency tree...
107s Reading state information...
107s Calculating upgrade...
107s The following packages will be upgraded:
107s   libcap-ng0 pastebinit python3-systemd
108s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
108s Need to get 77.8 kB of archives.
108s After this operation, 123 kB of additional disk space will be used.
108s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libcap-ng0 s390x 0.8.5-3build1 [15.9 kB]
108s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pastebinit all 1.7.1-1 [14.9 kB]
108s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-systemd s390x 235-1build5 [46.9 kB]
108s Fetched 77.8 kB in 0s (229 kB/s)
108s (Reading database ... 
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(Reading database ... 55511 files and directories currently installed.)
108s Preparing to unpack .../libcap-ng0_0.8.5-3build1_s390x.deb ...
108s Unpacking libcap-ng0:s390x (0.8.5-3build1) over (0.8.5-1) ...
108s Setting up libcap-ng0:s390x (0.8.5-3build1) ...
108s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55511 files and directories currently installed.)
108s Preparing to unpack .../pastebinit_1.7.1-1_all.deb ...
108s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ...
108s Preparing to unpack .../python3-systemd_235-1build5_s390x.deb ...
108s Unpacking python3-systemd (235-1build5) over (235-1build4) ...
108s Setting up pastebinit (1.7.1-1) ...
108s Setting up python3-systemd (235-1build5) ...
108s Processing triggers for man-db (2.12.1-3) ...
109s Processing triggers for libc-bin (2.40-1ubuntu3) ...
109s Reading package lists...
109s Building dependency tree...
109s Reading state information...
109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
110s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
110s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
110s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
110s Reading package lists...
110s Reading package lists...
111s Building dependency tree...
111s Reading state information...
111s Calculating upgrade...
111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
111s Reading package lists...
111s Building dependency tree...
111s Reading state information...
111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
113s autopkgtest [16:32:37]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024
114s autopkgtest [16:32:38]: @@@@@@@@@@@@@@@@@@@@ apt-source pybigwig
115s Get:1 http://ftpmaster.internal/ubuntu plucky/universe pybigwig 0.3.23+dfsg-1 (dsc) [2328 B]
115s Get:2 http://ftpmaster.internal/ubuntu plucky/universe pybigwig 0.3.23+dfsg-1 (tar) [31.8 kB]
115s Get:3 http://ftpmaster.internal/ubuntu plucky/universe pybigwig 0.3.23+dfsg-1 (diff) [4860 B]
115s gpgv: Signature made Sun Nov  3 16:14:37 2024 UTC
115s gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
115s gpgv:                issuer "emollier@debian.org"
115s gpgv: Can't check signature: No public key
115s dpkg-source: warning: cannot verify inline signature for ./pybigwig_0.3.23+dfsg-1.dsc: no acceptable signature found
115s autopkgtest [16:32:39]: testing package pybigwig version 0.3.23+dfsg-1
115s autopkgtest [16:32:39]: build not needed
116s autopkgtest [16:32:40]: test command1: preparing testbed
118s Reading package lists...
118s Building dependency tree...
118s Reading state information...
118s Starting pkgProblemResolver with broken count: 0
118s Starting 2 pkgProblemResolver with broken count: 0
118s Done
118s The following additional packages will be installed:
118s   libbigwig0t64 libblas3 libgfortran5 liblapack3 python3-all python3-numpy
118s   python3-pybigwig
118s Suggested packages:
118s   gcc gfortran python-numpy-doc python3-dev python3-pytest
118s The following NEW packages will be installed:
118s   autopkgtest-satdep libbigwig0t64 libblas3 libgfortran5 liblapack3
118s   python3-all python3-numpy python3-pybigwig
118s 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded.
118s Need to get 8455 kB/8456 kB of archives.
118s After this operation, 42.4 MB of additional disk space will be used.
118s Get:1 /tmp/autopkgtest.B8uyx3/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B]
119s Get:2 http://ftpmaster.internal/ubuntu plucky/universe s390x libbigwig0t64 s390x 0.4.7+dfsg-3.1build2 [32.7 kB]
119s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB]
119s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB]
119s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB]
119s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all s390x 3.12.6-0ubuntu1 [890 B]
119s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-numpy s390x 1:1.26.4+ds-11ubuntu1 [4602 kB]
119s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybigwig s390x 0.3.23+dfsg-1 [42.7 kB]
120s Fetched 8455 kB in 1s (10.4 MB/s)
120s Selecting previously unselected package libbigwig0t64:s390x.
120s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55516 files and directories currently installed.)
120s Preparing to unpack .../0-libbigwig0t64_0.4.7+dfsg-3.1build2_s390x.deb ...
120s Unpacking libbigwig0t64:s390x (0.4.7+dfsg-3.1build2) ...
120s Selecting previously unselected package libblas3:s390x.
120s Preparing to unpack .../1-libblas3_3.12.0-3build2_s390x.deb ...
120s Unpacking libblas3:s390x (3.12.0-3build2) ...
120s Selecting previously unselected package libgfortran5:s390x.
120s Preparing to unpack .../2-libgfortran5_14.2.0-8ubuntu1_s390x.deb ...
120s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ...
120s Selecting previously unselected package liblapack3:s390x.
120s Preparing to unpack .../3-liblapack3_3.12.0-3build2_s390x.deb ...
120s Unpacking liblapack3:s390x (3.12.0-3build2) ...
120s Selecting previously unselected package python3-all.
120s Preparing to unpack .../4-python3-all_3.12.6-0ubuntu1_s390x.deb ...
120s Unpacking python3-all (3.12.6-0ubuntu1) ...
120s Selecting previously unselected package python3-numpy.
120s Preparing to unpack .../5-python3-numpy_1%3a1.26.4+ds-11ubuntu1_s390x.deb ...
120s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ...
120s Selecting previously unselected package python3-pybigwig.
120s Preparing to unpack .../6-python3-pybigwig_0.3.23+dfsg-1_s390x.deb ...
120s Unpacking python3-pybigwig (0.3.23+dfsg-1) ...
120s Selecting previously unselected package autopkgtest-satdep.
120s Preparing to unpack .../7-1-autopkgtest-satdep.deb ...
120s Unpacking autopkgtest-satdep (0) ...
120s Setting up python3-all (3.12.6-0ubuntu1) ...
120s Setting up libblas3:s390x (3.12.0-3build2) ...
120s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
120s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ...
120s Setting up libbigwig0t64:s390x (0.4.7+dfsg-3.1build2) ...
120s Setting up liblapack3:s390x (3.12.0-3build2) ...
120s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
120s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ...
122s Setting up python3-pybigwig (0.3.23+dfsg-1) ...
122s Setting up autopkgtest-satdep (0) ...
122s Processing triggers for man-db (2.12.1-3) ...
122s Processing triggers for libc-bin (2.40-1ubuntu3) ...
124s (Reading database ... 56456 files and directories currently installed.)
124s Removing autopkgtest-satdep (0) ...
124s autopkgtest [16:32:48]: test command1: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd pyBigWigTest ; $py test.py ; cd .. ; done
124s autopkgtest [16:32:48]: test command1: [-----------------------
125s autopkgtest [16:32:49]: test command1: -----------------------]
125s command1             PASS
125s autopkgtest [16:32:49]: test command1:  - - - - - - - - - - results - - - - - - - - - -
126s autopkgtest [16:32:50]: @@@@@@@@@@@@@@@@@@@@ summary
126s command1             PASS
138s nova [W] Using flock in prodstack6-s390x
138s flock: timeout while waiting to get lock
138s Creating nova instance adt-plucky-s390x-pybigwig-20241114-163044-juju-7f2275-prod-proposed-migration-environment-20-3c2136eb-dbb6-4c47-9ad5-223337da3fb2 from image adt/ubuntu-plucky-s390x-server-20241114.img (UUID 41a907ef-1f3c-4685-a0eb-228b0d61c6b5)...