0s autopkgtest [16:43:47]: starting date and time: 2025-03-15 16:43:47+0000 0s autopkgtest [16:43:47]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:43:47]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.jynhuh1e/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade plast --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-2.secgroup --name adt-plucky-s390x-plast-20250315-164347-juju-7f2275-prod-proposed-migration-environment-20-365c80e0-2f42-4f08-860d-faf4eb361a62 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 139s autopkgtest [16:46:06]: testbed dpkg architecture: s390x 140s autopkgtest [16:46:07]: testbed apt version: 2.9.33 140s autopkgtest [16:46:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 140s autopkgtest [16:46:07]: testbed release detected to be: None 141s autopkgtest [16:46:08]: updating testbed package index (apt update) 141s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 141s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 141s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 141s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 142s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 142s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 142s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 142s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 142s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 142s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 142s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 142s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 142s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 142s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 143s Fetched 1073 kB in 2s (636 kB/s) 143s Reading package lists... 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s Calculating upgrade... 144s Calculating upgrade... 144s The following packages were automatically installed and are no longer required: 144s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 144s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 144s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 144s linux-tools-6.11.0-8-generic 144s Use 'sudo apt autoremove' to remove them. 144s The following packages will be upgraded: 144s pinentry-curses python3-jinja2 strace 144s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Need to get 652 kB of archives. 144s After this operation, 27.6 kB of additional disk space will be used. 144s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 145s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 145s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 145s Fetched 652 kB in 1s (612 kB/s) 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 146s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 146s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 146s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 146s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 146s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 146s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 146s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 146s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 146s Setting up strace (6.13+ds-1ubuntu1) ... 146s Processing triggers for man-db (2.13.0-1) ... 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 147s Solving dependencies... 147s The following packages will be REMOVED: 147s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 147s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 147s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 147s linux-tools-6.11.0-8-generic* 147s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 147s After this operation, 167 MB disk space will be freed. 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 147s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 147s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 147s Removing libpython3.12t64:s390x (3.12.9-1) ... 147s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 147s Removing libnsl2:s390x (1.3.0-3build3) ... 147s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 147s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 147s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 148s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 148s Processing triggers for libc-bin (2.41-1ubuntu1) ... 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 148s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 148s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 148s autopkgtest [16:46:15]: upgrading testbed (apt dist-upgrade and autopurge) 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 148s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 148s Starting 2 pkgProblemResolver with broken count: 0 148s Done 149s Entering ResolveByKeep 149s 149s Calculating upgrade... 149s The following packages will be upgraded: 149s libc-bin libc-dev-bin libc6 libc6-dev locales 149s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s Need to get 9512 kB of archives. 149s After this operation, 8192 B of additional disk space will be used. 149s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 151s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 151s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 154s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 155s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 160s Preconfiguring packages ... 160s Fetched 9512 kB in 11s (859 kB/s) 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 160s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 160s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 160s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 160s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 160s Setting up libc6:s390x (2.41-1ubuntu2) ... 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 161s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 161s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 161s Setting up libc-bin (2.41-1ubuntu2) ... 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 161s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 161s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 161s Setting up locales (2.41-1ubuntu2) ... 161s Generating locales (this might take a while)... 162s en_US.UTF-8... done 162s Generation complete. 162s Setting up libc-dev-bin (2.41-1ubuntu2) ... 162s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 162s Processing triggers for man-db (2.13.0-1) ... 163s Processing triggers for systemd (257.3-1ubuntu3) ... 163s Reading package lists... 163s Building dependency tree... 163s Reading state information... 164s Starting pkgProblemResolver with broken count: 0 164s Starting 2 pkgProblemResolver with broken count: 0 164s Done 164s Solving dependencies... 164s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s autopkgtest [16:46:31]: rebooting testbed after setup commands that affected boot 180s autopkgtest [16:46:47]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 182s autopkgtest [16:46:49]: @@@@@@@@@@@@@@@@@@@@ apt-source plast 192s Get:1 http://ftpmaster.internal/ubuntu plucky/universe plast 2.3.2+dfsg-10 (dsc) [2072 B] 192s Get:2 http://ftpmaster.internal/ubuntu plucky/universe plast 2.3.2+dfsg-10 (tar) [5726 kB] 192s Get:3 http://ftpmaster.internal/ubuntu plucky/universe plast 2.3.2+dfsg-10 (diff) [21.1 kB] 192s gpgv: Signature made Mon Dec 5 18:36:04 2022 UTC 192s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 192s gpgv: issuer "tille@debian.org" 192s gpgv: Can't check signature: No public key 192s dpkg-source: warning: cannot verify inline signature for ./plast_2.3.2+dfsg-10.dsc: no acceptable signature found 192s autopkgtest [16:46:59]: testing package plast version 2.3.2+dfsg-10 193s autopkgtest [16:47:00]: build not needed 195s autopkgtest [16:47:02]: test run-unit-test: preparing testbed 195s Reading package lists... 195s Building dependency tree... 195s Reading state information... 196s Starting pkgProblemResolver with broken count: 0 196s Starting 2 pkgProblemResolver with broken count: 0 196s Done 196s The following NEW packages will be installed: 196s plast plast-example 196s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 196s Need to get 6966 kB of archives. 196s After this operation, 8242 kB of additional disk space will be used. 196s Get:1 http://ftpmaster.internal/ubuntu plucky/universe s390x plast s390x 2.3.2+dfsg-10 [602 kB] 197s Get:2 http://ftpmaster.internal/ubuntu plucky/universe s390x plast-example all 2.3.2+dfsg-10 [6363 kB] 205s Fetched 6966 kB in 9s (798 kB/s) 205s Selecting previously unselected package plast. 205s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 205s Preparing to unpack .../plast_2.3.2+dfsg-10_s390x.deb ... 205s Unpacking plast (2.3.2+dfsg-10) ... 205s Selecting previously unselected package plast-example. 205s Preparing to unpack .../plast-example_2.3.2+dfsg-10_all.deb ... 205s Unpacking plast-example (2.3.2+dfsg-10) ... 205s Setting up plast (2.3.2+dfsg-10) ... 205s Setting up plast-example (2.3.2+dfsg-10) ... 205s Processing triggers for man-db (2.13.0-1) ... 207s autopkgtest [16:47:14]: test run-unit-test: [----------------------- 207s Start PLAST... 207s 207s /usr/bin/plast -p plastp -i db/query.fa -d db/tursiops.fa -o /tmp/autopkgtest.9Zivh5/autopkgtest_tmp/db/out.txt 207s Using /usr/lib/plast/bin/plast without SIMD support 232s 232s done! 232s 232s Read: /tmp/autopkgtest.9Zivh5/autopkgtest_tmp/db/out.txt 232s 232s 232s autopkgtest [16:47:39]: test run-unit-test: -----------------------] 233s autopkgtest [16:47:40]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 233s run-unit-test PASS 233s autopkgtest [16:47:40]: @@@@@@@@@@@@@@@@@@@@ summary 233s run-unit-test PASS 250s nova [W] Using flock in prodstack6-s390x 250s flock: timeout while waiting to get lock 250s Creating nova instance adt-plucky-s390x-plast-20250315-164347-juju-7f2275-prod-proposed-migration-environment-20-365c80e0-2f42-4f08-860d-faf4eb361a62 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 250s nova [W] Timed out waiting for ebcf1bd9-3122-4f48-8102-cb771a86baca to get deleted.