0s autopkgtest [01:41:36]: starting date and time: 2025-03-16 01:41:36+0000 0s autopkgtest [01:41:36]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [01:41:36]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.j3bl75w0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:scikit-learn --apt-upgrade opentsne --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=scikit-learn/1.4.2+dfsg-8 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-6.secgroup --name adt-plucky-s390x-opentsne-20250316-014136-juju-7f2275-prod-proposed-migration-environment-15-f9e9ec35-d369-4cf8-a84f-5992e2605314 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 49s autopkgtest [01:42:25]: testbed dpkg architecture: s390x 50s autopkgtest [01:42:26]: testbed apt version: 2.9.33 50s autopkgtest [01:42:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 50s autopkgtest [01:42:26]: testbed release detected to be: None 51s autopkgtest [01:42:27]: updating testbed package index (apt update) 51s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 52s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 52s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 52s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 52s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [365 kB] 52s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.7 kB] 52s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [41.4 kB] 52s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [75.4 kB] 52s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1784 B] 52s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 52s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [294 kB] 52s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [12.3 kB] 52s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4956 B] 52s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 52s Fetched 940 kB in 1s (1236 kB/s) 53s Reading package lists... 53s + lsb_release --codename --short 53s + RELEASE=plucky 53s + cat 53s + [ plucky != trusty ] 53s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 53s Reading package lists... 53s Building dependency tree... 53s Reading state information... 53s Calculating upgrade... 54s Calculating upgrade... 54s The following packages were automatically installed and are no longer required: 54s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 54s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 54s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 54s linux-tools-6.11.0-8-generic 54s Use 'sudo apt autoremove' to remove them. 54s The following packages will be upgraded: 54s pinentry-curses python3-jinja2 strace 54s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s Need to get 652 kB of archives. 54s After this operation, 27.6 kB of additional disk space will be used. 54s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 54s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 54s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 54s Fetched 652 kB in 1s (1217 kB/s) 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 55s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 55s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 55s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 55s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 55s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 55s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 55s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 55s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 55s Setting up strace (6.13+ds-1ubuntu1) ... 55s Processing triggers for man-db (2.13.0-1) ... 55s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 55s + /usr/lib/apt/apt-helper analyze-pattern ?true 55s + uname -r 55s + sed s/\./\\./g 55s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 55s + apt list ?obsolete 55s + + cut -d/ -f1 55s tail -n+2 55s + grep -v ^linux-.*6\.14\.0-10-generic.* 55s + obsolete_pkgs=linux-headers-6.11.0-8-generic 55s linux-headers-6.11.0-8 55s linux-modules-6.11.0-8-generic 55s linux-tools-6.11.0-8-generic 55s linux-tools-6.11.0-8 55s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 56s Solving dependencies... 56s The following packages will be REMOVED: 56s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 56s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 56s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 56s linux-tools-6.11.0-8-generic* 56s 0 upgraded, 0 newly installed, 9 to remove and 0 not upgraded. 56s After this operation, 167 MB disk space will be freed. 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 56s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 56s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 56s Removing libpython3.12t64:s390x (3.12.9-1) ... 56s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 56s Removing libnsl2:s390x (1.3.0-3build3) ... 56s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 56s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 56s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 57s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 57s Processing triggers for libc-bin (2.41-1ubuntu1) ... 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 57s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 57s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 57s + grep -q trusty /etc/lsb-release 57s + [ ! -d /usr/share/doc/unattended-upgrades ] 57s + [ ! -d /usr/share/doc/lxd ] 57s + [ ! -d /usr/share/doc/lxd-client ] 57s + [ ! -d /usr/share/doc/snapd ] 57s + type iptables 57s + cat 57s + chmod 755 /etc/rc.local 57s + . /etc/rc.local 57s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 57s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 57s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 57s + uname -m 57s + [ s390x = ppc64le ] 57s + [ -d /run/systemd/system ] 57s + systemd-detect-virt --quiet --vm 57s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 57s + cat 57s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 57s + echo COMPRESS=lz4 57s autopkgtest [01:42:33]: upgrading testbed (apt dist-upgrade and autopurge) 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 57s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 57s Starting 2 pkgProblemResolver with broken count: 0 57s Done 58s Entering ResolveByKeep 58s 58s Calculating upgrade... 58s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s Reading package lists... 58s Building dependency tree... 58s Reading state information... 58s Starting pkgProblemResolver with broken count: 0 58s Starting 2 pkgProblemResolver with broken count: 0 58s Done 58s Solving dependencies... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest [01:42:35]: rebooting testbed after setup commands that affected boot 78s autopkgtest [01:42:54]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 80s autopkgtest [01:42:56]: @@@@@@@@@@@@@@@@@@@@ apt-source opentsne 83s Get:1 http://ftpmaster.internal/ubuntu plucky/universe opentsne 1.0.2-1ubuntu4 (dsc) [2377 B] 83s Get:2 http://ftpmaster.internal/ubuntu plucky/universe opentsne 1.0.2-1ubuntu4 (tar) [22.1 MB] 83s Get:3 http://ftpmaster.internal/ubuntu plucky/universe opentsne 1.0.2-1ubuntu4 (diff) [5396 B] 83s gpgv: Signature made Tue Mar 4 17:45:11 2025 UTC 83s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 83s gpgv: Can't check signature: No public key 83s dpkg-source: warning: cannot verify inline signature for ./opentsne_1.0.2-1ubuntu4.dsc: no acceptable signature found 83s autopkgtest [01:42:59]: testing package opentsne version 1.0.2-1ubuntu4 83s autopkgtest [01:42:59]: build not needed 85s autopkgtest [01:43:01]: test python: preparing testbed 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Starting pkgProblemResolver with broken count: 0 85s Starting 2 pkgProblemResolver with broken count: 0 85s Done 85s The following NEW packages will be installed: 85s libblas3 libfftw3-double3 libgfortran5 libgomp1 liblapack3 liblbfgsb0 85s python3-all python3-decorator python3-iniconfig python3-joblib python3-numpy 85s python3-numpy-dev python3-opentsne python3-packaging python3-pluggy 85s python3-pytest python3-pytest-runner python3-scipy python3-sklearn 85s python3-sklearn-lib python3-threadpoolctl 86s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded. 86s Need to get 34.5 MB of archives. 86s After this operation, 146 MB of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy-dev s390x 1:2.2.3+ds-5 [147 kB] 86s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 86s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 86s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 86s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:2.2.3+ds-5 [4396 kB] 87s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB] 87s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libfftw3-double3 s390x 3.3.10-2fakesync1build1 [511 kB] 87s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 87s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all s390x 3.13.2-2 [886 B] 87s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 87s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 87s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.4.2-3 [205 kB] 87s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.14.1-4ubuntu2 [18.0 MB] 90s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-threadpoolctl all 3.1.0-1 [21.3 kB] 90s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python3-sklearn-lib s390x 1.4.2+dfsg-8 [4262 kB] 90s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python3-sklearn all 1.4.2+dfsg-8 [2258 kB] 90s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-opentsne s390x 1.0.2-1ubuntu4 [393 kB] 91s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.2-1 [51.5 kB] 91s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 91s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.5-1 [252 kB] 91s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-runner all 2.11.1-4 [7450 B] 91s Fetched 34.5 MB in 5s (6644 kB/s) 91s Selecting previously unselected package python3-numpy-dev:s390x. 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 91s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.3+ds-5_s390x.deb ... 91s Unpacking python3-numpy-dev:s390x (1:2.2.3+ds-5) ... 91s Selecting previously unselected package libblas3:s390x. 91s Preparing to unpack .../01-libblas3_3.12.1-2_s390x.deb ... 91s Unpacking libblas3:s390x (3.12.1-2) ... 91s Selecting previously unselected package libgfortran5:s390x. 91s Preparing to unpack .../02-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 91s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 91s Selecting previously unselected package liblapack3:s390x. 91s Preparing to unpack .../03-liblapack3_3.12.1-2_s390x.deb ... 91s Unpacking liblapack3:s390x (3.12.1-2) ... 91s Selecting previously unselected package python3-numpy. 91s Preparing to unpack .../04-python3-numpy_1%3a2.2.3+ds-5_s390x.deb ... 91s Unpacking python3-numpy (1:2.2.3+ds-5) ... 91s Selecting previously unselected package libgomp1:s390x. 91s Preparing to unpack .../05-libgomp1_15-20250222-0ubuntu1_s390x.deb ... 91s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ... 91s Selecting previously unselected package libfftw3-double3:s390x. 91s Preparing to unpack .../06-libfftw3-double3_3.3.10-2fakesync1build1_s390x.deb ... 91s Unpacking libfftw3-double3:s390x (3.3.10-2fakesync1build1) ... 91s Selecting previously unselected package liblbfgsb0:s390x. 91s Preparing to unpack .../07-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 91s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 91s Selecting previously unselected package python3-all. 91s Preparing to unpack .../08-python3-all_3.13.2-2_s390x.deb ... 91s Unpacking python3-all (3.13.2-2) ... 91s Selecting previously unselected package python3-decorator. 91s Preparing to unpack .../09-python3-decorator_5.1.1-5_all.deb ... 91s Unpacking python3-decorator (5.1.1-5) ... 91s Selecting previously unselected package python3-iniconfig. 91s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 91s Unpacking python3-iniconfig (1.1.1-2) ... 91s Selecting previously unselected package python3-joblib. 91s Preparing to unpack .../11-python3-joblib_1.4.2-3_all.deb ... 91s Unpacking python3-joblib (1.4.2-3) ... 91s Selecting previously unselected package python3-scipy. 91s Preparing to unpack .../12-python3-scipy_1.14.1-4ubuntu2_s390x.deb ... 91s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 91s Selecting previously unselected package python3-threadpoolctl. 91s Preparing to unpack .../13-python3-threadpoolctl_3.1.0-1_all.deb ... 91s Unpacking python3-threadpoolctl (3.1.0-1) ... 91s Selecting previously unselected package python3-sklearn-lib:s390x. 91s Preparing to unpack .../14-python3-sklearn-lib_1.4.2+dfsg-8_s390x.deb ... 91s Unpacking python3-sklearn-lib:s390x (1.4.2+dfsg-8) ... 92s Selecting previously unselected package python3-sklearn. 92s Preparing to unpack .../15-python3-sklearn_1.4.2+dfsg-8_all.deb ... 92s Unpacking python3-sklearn (1.4.2+dfsg-8) ... 92s Selecting previously unselected package python3-opentsne. 92s Preparing to unpack .../16-python3-opentsne_1.0.2-1ubuntu4_s390x.deb ... 92s Unpacking python3-opentsne (1.0.2-1ubuntu4) ... 92s Selecting previously unselected package python3-packaging. 92s Preparing to unpack .../17-python3-packaging_24.2-1_all.deb ... 92s Unpacking python3-packaging (24.2-1) ... 92s Selecting previously unselected package python3-pluggy. 92s Preparing to unpack .../18-python3-pluggy_1.5.0-1_all.deb ... 92s Unpacking python3-pluggy (1.5.0-1) ... 92s Selecting previously unselected package python3-pytest. 92s Preparing to unpack .../19-python3-pytest_8.3.5-1_all.deb ... 92s Unpacking python3-pytest (8.3.5-1) ... 92s Selecting previously unselected package python3-pytest-runner. 92s Preparing to unpack .../20-python3-pytest-runner_2.11.1-4_all.deb ... 92s Unpacking python3-pytest-runner (2.11.1-4) ... 92s Setting up python3-iniconfig (1.1.1-2) ... 92s Setting up python3-joblib (1.4.2-3) ... 92s Setting up python3-threadpoolctl (3.1.0-1) ... 92s Setting up python3-all (3.13.2-2) ... 92s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ... 92s Setting up python3-decorator (5.1.1-5) ... 92s Setting up libblas3:s390x (3.12.1-2) ... 92s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 92s Setting up python3-packaging (24.2-1) ... 92s Setting up python3-numpy-dev:s390x (1:2.2.3+ds-5) ... 92s Setting up libfftw3-double3:s390x (3.3.10-2fakesync1build1) ... 92s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ... 92s Setting up python3-pluggy (1.5.0-1) ... 92s Setting up python3-pytest-runner (2.11.1-4) ... 92s Setting up liblapack3:s390x (3.12.1-2) ... 92s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 92s Setting up python3-pytest (8.3.5-1) ... 93s Setting up python3-numpy (1:2.2.3+ds-5) ... 94s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 94s Setting up python3-scipy (1.14.1-4ubuntu2) ... 97s Setting up python3-sklearn-lib:s390x (1.4.2+dfsg-8) ... 97s Setting up python3-sklearn (1.4.2+dfsg-8) ... 97s Setting up python3-opentsne (1.0.2-1ubuntu4) ... 97s Processing triggers for man-db (2.13.0-1) ... 98s Processing triggers for libc-bin (2.41-1ubuntu1) ... 99s autopkgtest [01:43:15]: test python: [----------------------- 99s + cp -rf tests /tmp/autopkgtest.UsmF3v/autopkgtest_tmp 99s + py3versions --supported 99s + cd /tmp/autopkgtest.UsmF3v/autopkgtest_tmp 99s + echo Testing with python3.13: 99s + python3.13 -m pytest 99s Testing with python3.13: 100s ============================= test session starts ============================== 100s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 100s rootdir: /tmp/autopkgtest.UsmF3v/autopkgtest_tmp 100s plugins: typeguard-4.4.2 100s collected 163 items 100s 100s tests/test_affinities.py ......................... [ 15%] 132s tests/test_correctness.py ......................X... [ 31%] 141s tests/test_different_usages.py ............ [ 38%] 143s tests/test_nearest_neighbors.py ..................ssssssssssssssssssssss [ 63%] 143s ss [ 64%] 144s tests/test_sklearn_wrapper.py ... [ 66%] 149s tests/test_tsne.py ...ss............................................... [ 98%] 149s tests/test_utils.py ... [100%] 149s 149s =============================== warnings summary =============================== 149s tests/test_correctness.py::TestDataMatricesWithDuplicatedRows::test_works_without_error 149s /usr/lib/python3/dist-packages/sklearn/preprocessing/_discretization.py:248: FutureWarning: In version 1.5 onwards, subsample=200_000 will be used by default. Set subsample explicitly to silence this warning in the mean time. Set subsample=None to disable subsampling explicitly. 149s warnings.warn( 149s 149s tests/test_different_usages.py::TestUsageWithCustomAffinity::test_affinity 149s tests/test_different_usages.py::TestUsageWithCustomAffinity::test_precomputed_affinity 149s tests/test_different_usages.py::TestUsageWithCustomAffinityAndCustomNeighbors::test_affinity_with_precomputed_distances 149s tests/test_different_usages.py::TestUsageWithCustomAffinityAndCustomNeighbors::test_affinity_with_precomputed_neighbors 149s tests/test_different_usages.py::TestUsageWithCustomAffinityAndCustomNeighbors::test_affinity_with_queryable_knn_index 149s tests/test_tsne.py::TestAffinityIntegration::test_transform_with_nonstandard_affinity 149s /usr/lib/python3/dist-packages/openTSNE/affinity.py:1219: FutureWarning: Using `mean` symmetrization, but the default behaviour is going to change to `max` in future versions. 149s warnings.warn( 149s 149s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 149s =========== 136 passed, 26 skipped, 1 xpassed, 7 warnings in -36.10s =========== 149s autopkgtest [01:44:05]: test python: -----------------------] 149s autopkgtest [01:44:05]: test python: - - - - - - - - - - results - - - - - - - - - - 149s python PASS 150s autopkgtest [01:44:06]: @@@@@@@@@@@@@@@@@@@@ summary 150s python PASS 156s nova [W] Using flock in prodstack6-s390x 156s Creating nova instance adt-plucky-s390x-opentsne-20250316-014136-juju-7f2275-prod-proposed-migration-environment-15-f9e9ec35-d369-4cf8-a84f-5992e2605314 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 156s nova [W] Timed out waiting for 9371c2bd-18c6-499e-ba30-da3174cc45f7 to get deleted.