0s autopkgtest [15:57:45]: starting date and time: 2025-03-15 15:57:45+0000 0s autopkgtest [15:57:45]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:57:45]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4giaighj/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-8.secgroup --name adt-plucky-s390x-nwchem-20250315-155744-juju-7f2275-prod-proposed-migration-environment-15-612ab1e2-f089-42f6-9d3d-a0cb1bc652fa --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 158s autopkgtest [16:00:23]: testbed dpkg architecture: s390x 158s autopkgtest [16:00:23]: testbed apt version: 2.9.33 158s autopkgtest [16:00:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup 159s autopkgtest [16:00:24]: testbed release detected to be: None 159s autopkgtest [16:00:24]: updating testbed package index (apt update) 160s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 160s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 160s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 160s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 160s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 161s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 161s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 161s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 161s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 161s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 161s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 161s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 161s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 161s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 162s Fetched 1073 kB in 2s (609 kB/s) 162s Reading package lists... 163s + lsb_release --codename --short 163s + RELEASE=plucky 163s + cat 163s + [ plucky != trusty ] 163s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 163s Reading package lists... 163s Building dependency tree... 163s Reading state information... 163s Calculating upgrade... 163s Calculating upgrade... 163s The following packages were automatically installed and are no longer required: 163s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 163s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 163s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 163s linux-tools-6.11.0-8-generic 163s Use 'sudo apt autoremove' to remove them. 163s The following packages will be upgraded: 163s pinentry-curses python3-jinja2 strace 163s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 163s Need to get 652 kB of archives. 163s After this operation, 27.6 kB of additional disk space will be used. 163s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 164s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 164s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 165s Fetched 652 kB in 1s (582 kB/s) 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 165s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 165s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 165s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 165s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 165s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 165s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 165s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 165s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 165s Setting up strace (6.13+ds-1ubuntu1) ... 165s Processing triggers for man-db (2.13.0-1) ... 166s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 166s + /usr/lib/apt/apt-helper analyze-pattern ?true 166s + uname -r 166s + sed s/\./\\./g 166s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 166s + apt list ?obsolete 166s + tail -n+2 166s + cut -d/ -f1 166s + grep -v ^linux-.*6\.14\.0-10-generic.* 166s + obsolete_pkgs=linux-headers-6.11.0-8-generic 166s linux-headers-6.11.0-8 166s linux-modules-6.11.0-8-generic 166s linux-tools-6.11.0-8-generic 166s linux-tools-6.11.0-8 166s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s Solving dependencies... 166s The following packages will be REMOVED: 166s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 166s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 166s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 166s linux-tools-6.11.0-8-generic* 166s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 166s After this operation, 167 MB disk space will be freed. 166s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 166s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 166s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 166s Removing libpython3.12t64:s390x (3.12.9-1) ... 166s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 166s Removing libnsl2:s390x (1.3.0-3build3) ... 166s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 166s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 167s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 167s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 167s Processing triggers for libc-bin (2.41-1ubuntu1) ... 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 168s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 168s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 168s + grep -q trusty /etc/lsb-release 168s + [ ! -d /usr/share/doc/unattended-upgrades ] 168s + [ ! -d /usr/share/doc/lxd ] 168s + [ ! -d /usr/share/doc/lxd-client ] 168s + [ ! -d /usr/share/doc/snapd ] 168s + type iptables 168s + cat 168s + chmod 755 /etc/rc.local 168s + . /etc/rc.local 168s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 168s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 168s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 168s + uname -m 168s + [ s390x = ppc64le ] 168s + [ -d /run/systemd/system ] 168s + systemd-detect-virt --quiet --vm 168s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 168s + cat 168s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 168s + echo COMPRESS=lz4 168s autopkgtest [16:00:33]: upgrading testbed (apt dist-upgrade and autopurge) 168s Reading package lists... 168s Building dependency tree... 168s Reading state information... 168s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 168s Starting 2 pkgProblemResolver with broken count: 0 168s Done 169s Entering ResolveByKeep 169s 169s Calculating upgrade... 169s The following packages will be upgraded: 169s libc-bin libc-dev-bin libc6 libc6-dev locales 169s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 169s Need to get 9512 kB of archives. 169s After this operation, 8192 B of additional disk space will be used. 169s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 171s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 171s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 174s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 175s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 181s Preconfiguring packages ... 181s Fetched 9512 kB in 11s (829 kB/s) 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 181s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 181s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 181s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 181s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up libc6:s390x (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 181s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 181s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up libc-bin (2.41-1ubuntu2) ... 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 181s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 181s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 181s Setting up locales (2.41-1ubuntu2) ... 182s Generating locales (this might take a while)... 182s en_US.UTF-8... done 182s Generation complete. 182s Setting up libc-dev-bin (2.41-1ubuntu2) ... 182s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 182s Processing triggers for man-db (2.13.0-1) ... 183s Processing triggers for systemd (257.3-1ubuntu3) ... 184s Reading package lists... 184s Building dependency tree... 184s Reading state information... 184s Starting pkgProblemResolver with broken count: 0 184s Starting 2 pkgProblemResolver with broken count: 0 184s Done 184s Solving dependencies... 185s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 185s autopkgtest [16:00:50]: rebooting testbed after setup commands that affected boot 206s autopkgtest [16:01:11]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 209s autopkgtest [16:01:14]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 410s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 410s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (tar) [168 MB] 410s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (diff) [560 kB] 410s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 410s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 410s gpgv: Can't check signature: No public key 410s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 437s autopkgtest [16:05:02]: testing package nwchem version 7.2.3-7build1 440s autopkgtest [16:05:05]: build not needed 506s autopkgtest [16:06:11]: test testsuite.sh: preparing testbed 507s Reading package lists... 507s Building dependency tree... 507s Reading state information... 507s Starting pkgProblemResolver with broken count: 0 507s Starting 2 pkgProblemResolver with broken count: 0 507s Done 507s The following NEW packages will be installed: 507s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 507s libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 507s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin nwchem 507s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 507s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded. 507s Need to get 29.7 MB of archives. 507s After this operation, 150 MB of additional disk space will be used. 507s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 508s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 508s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 55.0-1ubuntu1 [73.7 kB] 508s Get:4 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 508s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 509s Get:6 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 509s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 513s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 513s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 513s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 513s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 513s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 513s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 514s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 517s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 517s Get:16 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 517s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.18 [2510 B] 517s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB] 520s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 527s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB] 543s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem all 7.2.3-7build1 [17.9 kB] 543s Fetched 29.7 MB in 36s (820 kB/s) 543s Selecting previously unselected package libblas3:s390x. 544s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 544s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 544s Unpacking libblas3:s390x (3.12.1-2) ... 544s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 544s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 544s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 544s Selecting previously unselected package librdmacm1t64:s390x. 544s Preparing to unpack .../02-librdmacm1t64_55.0-1ubuntu1_s390x.deb ... 544s Unpacking librdmacm1t64:s390x (55.0-1ubuntu1) ... 544s Selecting previously unselected package libfabric1:s390x. 544s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 544s Unpacking libfabric1:s390x (1.17.0-3.1) ... 544s Selecting previously unselected package libgfortran5:s390x. 544s Preparing to unpack .../04-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 544s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 544s Selecting previously unselected package libhwloc15:s390x. 544s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 544s Unpacking libhwloc15:s390x (2.12.0-1) ... 544s Selecting previously unselected package liblapack3:s390x. 544s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 544s Unpacking liblapack3:s390x (3.12.1-2) ... 544s Selecting previously unselected package libmunge2:s390x. 544s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 544s Unpacking libmunge2:s390x (0.5.16-1) ... 544s Selecting previously unselected package libpciaccess0:s390x. 544s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 544s Unpacking libpciaccess0:s390x (0.17-3build1) ... 544s Selecting previously unselected package libxnvctrl0:s390x. 544s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 544s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 544s Selecting previously unselected package ocl-icd-libopencl1:s390x. 544s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 544s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 544s Selecting previously unselected package libhwloc-plugins:s390x. 544s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 544s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 544s Selecting previously unselected package libpmix2t64:s390x. 544s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 544s Unpacking libpmix2t64:s390x (5.0.6-5) ... 544s Selecting previously unselected package libopenmpi40:s390x. 544s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 544s Unpacking libopenmpi40:s390x (5.0.7-1) ... 544s Selecting previously unselected package openmpi-common. 544s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 544s Unpacking openmpi-common (5.0.7-1) ... 544s Selecting previously unselected package openmpi-bin. 544s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 544s Unpacking openmpi-bin (5.0.7-1) ... 544s Selecting previously unselected package mpi-default-bin. 544s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 544s Unpacking mpi-default-bin (1.18) ... 544s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 544s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ... 544s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 544s Selecting previously unselected package nwchem-data. 544s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ... 544s Unpacking nwchem-data (7.2.3-7build1) ... 544s Selecting previously unselected package nwchem-openmpi. 544s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ... 544s Unpacking nwchem-openmpi (7.2.3-7build1) ... 544s Selecting previously unselected package nwchem. 544s Preparing to unpack .../20-nwchem_7.2.3-7build1_all.deb ... 544s Unpacking nwchem (7.2.3-7build1) ... 544s Setting up libpciaccess0:s390x (0.17-3build1) ... 544s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 544s Setting up nwchem-data (7.2.3-7build1) ... 544s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 544s Setting up libblas3:s390x (3.12.1-2) ... 544s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 544s Setting up libmunge2:s390x (0.5.16-1) ... 544s Setting up libhwloc15:s390x (2.12.0-1) ... 544s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ... 544s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 544s Setting up openmpi-common (5.0.7-1) ... 544s Setting up librdmacm1t64:s390x (55.0-1ubuntu1) ... 544s Setting up libfabric1:s390x (1.17.0-3.1) ... 544s Setting up liblapack3:s390x (3.12.1-2) ... 545s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 545s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 545s Setting up libpmix2t64:s390x (5.0.6-5) ... 545s Setting up libopenmpi40:s390x (5.0.7-1) ... 545s Setting up openmpi-bin (5.0.7-1) ... 545s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 545s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 545s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 545s Setting up mpi-default-bin (1.18) ... 545s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 545s Setting up nwchem-openmpi (7.2.3-7build1) ... 545s Setting up nwchem (7.2.3-7build1) ... 545s Processing triggers for man-db (2.13.0-1) ... 545s Processing triggers for libc-bin (2.41-1ubuntu2) ... 546s autopkgtest [16:06:51]: test testsuite.sh: [----------------------- 546s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 546s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 546s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 546s skipping extra tests on s390x 546s Skipping mpich tests on s390x due to flaky mpich support 547s autopkgtest [16:06:52]: test testsuite.sh: -----------------------] 547s testsuite.sh PASS 547s autopkgtest [16:06:52]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 547s autopkgtest [16:06:52]: test testsuite-openmpi: preparing testbed 653s autopkgtest [16:08:38]: testbed dpkg architecture: s390x 653s autopkgtest [16:08:38]: testbed apt version: 2.9.33 653s autopkgtest [16:08:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 653s autopkgtest [16:08:38]: testbed release detected to be: plucky 654s autopkgtest [16:08:39]: updating testbed package index (apt update) 654s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 655s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 655s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 655s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 655s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 655s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 655s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 656s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 656s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 656s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 656s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 657s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 657s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 657s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 657s Fetched 1073 kB in 3s (428 kB/s) 658s Reading package lists... 658s + lsb_release --codename --short 658s + RELEASE=plucky 658s + cat 658s + [ plucky != trusty ] 658s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 658s Reading package lists... 658s Building dependency tree... 658s Reading state information... 658s Calculating upgrade... 658s Calculating upgrade... 659s The following packages were automatically installed and are no longer required: 659s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 659s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 659s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 659s linux-tools-6.11.0-8-generic 659s Use 'sudo apt autoremove' to remove them. 659s The following packages will be upgraded: 659s pinentry-curses python3-jinja2 strace 659s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 659s Need to get 652 kB of archives. 659s After this operation, 27.6 kB of additional disk space will be used. 659s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 659s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 660s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 660s Fetched 652 kB in 1s (590 kB/s) 660s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 660s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 660s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 660s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 660s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 660s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 660s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 660s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 660s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 660s Setting up strace (6.13+ds-1ubuntu1) ... 660s Processing triggers for man-db (2.13.0-1) ... 661s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 661s + /usr/lib/apt/apt-helper analyze-pattern ?true 661s + uname -r 661s + sed s/\./\\./g 661s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 661s + apt list ?obsolete 661s + tail -n+2 661s + cut -d/ -f1 661s + grep -v ^linux-.*6\.14\.0-10-generic.* 661s + obsolete_pkgs=linux-headers-6.11.0-8-generic 661s linux-headers-6.11.0-8 661s linux-modules-6.11.0-8-generic 661s linux-tools-6.11.0-8-generic 661s linux-tools-6.11.0-8 661s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 661s Reading package lists... 661s Building dependency tree... 661s Reading state information... 661s Solving dependencies... 662s The following packages will be REMOVED: 662s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 662s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 662s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 662s linux-tools-6.11.0-8-generic* 662s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 662s After this operation, 167 MB disk space will be freed. 662s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 662s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 662s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 662s Removing libpython3.12t64:s390x (3.12.9-1) ... 662s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 662s Removing libnsl2:s390x (1.3.0-3build3) ... 662s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 662s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 662s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 663s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 663s Processing triggers for libc-bin (2.41-1ubuntu1) ... 663s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 663s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 663s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 663s + grep -q trusty /etc/lsb-release 663s + [ ! -d /usr/share/doc/unattended-upgrades ] 663s + [ ! -d /usr/share/doc/lxd ] 663s + [ ! -d /usr/share/doc/lxd-client ] 663s + [ ! -d /usr/share/doc/snapd ] 663s + type iptables 663s + cat 663s + chmod 755 /etc/rc.local 663s + . /etc/rc.local 663s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 663s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 663s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 663s + uname -m 663s + [ s390x = ppc64le ] 663s + [ -d /run/systemd/system ] 663s + systemd-detect-virt --quiet --vm 663s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 663s + cat 663s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 663s + echo COMPRESS=lz4 663s autopkgtest [16:08:48]: upgrading testbed (apt dist-upgrade and autopurge) 664s Reading package lists... 664s Building dependency tree... 664s Reading state information... 664s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 664s Starting 2 pkgProblemResolver with broken count: 0 664s Done 664s Entering ResolveByKeep 664s 664s Calculating upgrade... 664s The following packages will be upgraded: 664s libc-bin libc-dev-bin libc6 libc6-dev locales 665s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 665s Need to get 9512 kB of archives. 665s After this operation, 8192 B of additional disk space will be used. 665s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 667s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 667s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 670s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 671s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 676s Preconfiguring packages ... 676s Fetched 9512 kB in 11s (845 kB/s) 676s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 676s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 676s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 676s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 676s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 676s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 676s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 676s Setting up libc6:s390x (2.41-1ubuntu2) ... 676s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 676s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 676s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 676s Setting up libc-bin (2.41-1ubuntu2) ... 676s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 676s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 676s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 677s Setting up locales (2.41-1ubuntu2) ... 677s Generating locales (this might take a while)... 678s en_US.UTF-8... done 678s Generation complete. 678s Setting up libc-dev-bin (2.41-1ubuntu2) ... 678s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 678s Processing triggers for man-db (2.13.0-1) ... 679s Processing triggers for systemd (257.3-1ubuntu3) ... 679s Reading package lists... 679s Building dependency tree... 679s Reading state information... 680s Starting pkgProblemResolver with broken count: 0 680s Starting 2 pkgProblemResolver with broken count: 0 680s Done 680s Solving dependencies... 680s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 680s autopkgtest [16:09:05]: rebooting testbed after setup commands that affected boot 701s Reading package lists... 701s Building dependency tree... 701s Reading state information... 701s Starting pkgProblemResolver with broken count: 0 701s Starting 2 pkgProblemResolver with broken count: 0 701s Done 702s The following NEW packages will be installed: 702s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 702s libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 702s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin 702s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 702s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded. 702s Need to get 29.7 MB of archives. 702s After this operation, 150 MB of additional disk space will be used. 702s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 702s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 702s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 55.0-1ubuntu1 [73.7 kB] 702s Get:4 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 703s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 704s Get:6 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 704s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 708s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 708s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 708s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 708s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 708s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 708s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 709s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 711s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 711s Get:16 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 712s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.18 [2510 B] 712s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB] 714s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 722s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB] 739s Fetched 29.7 MB in 37s (793 kB/s) 739s Selecting previously unselected package libblas3:s390x. 739s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 739s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 739s Unpacking libblas3:s390x (3.12.1-2) ... 739s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 739s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 739s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 739s Selecting previously unselected package librdmacm1t64:s390x. 739s Preparing to unpack .../02-librdmacm1t64_55.0-1ubuntu1_s390x.deb ... 739s Unpacking librdmacm1t64:s390x (55.0-1ubuntu1) ... 739s Selecting previously unselected package libfabric1:s390x. 739s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 739s Unpacking libfabric1:s390x (1.17.0-3.1) ... 739s Selecting previously unselected package libgfortran5:s390x. 739s Preparing to unpack .../04-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 739s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 739s Selecting previously unselected package libhwloc15:s390x. 739s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 739s Unpacking libhwloc15:s390x (2.12.0-1) ... 739s Selecting previously unselected package liblapack3:s390x. 739s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 739s Unpacking liblapack3:s390x (3.12.1-2) ... 739s Selecting previously unselected package libmunge2:s390x. 739s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 739s Unpacking libmunge2:s390x (0.5.16-1) ... 739s Selecting previously unselected package libpciaccess0:s390x. 739s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 739s Unpacking libpciaccess0:s390x (0.17-3build1) ... 739s Selecting previously unselected package libxnvctrl0:s390x. 739s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 739s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 739s Selecting previously unselected package ocl-icd-libopencl1:s390x. 740s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 740s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 740s Selecting previously unselected package libhwloc-plugins:s390x. 740s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 740s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 740s Selecting previously unselected package libpmix2t64:s390x. 740s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 740s Unpacking libpmix2t64:s390x (5.0.6-5) ... 740s Selecting previously unselected package libopenmpi40:s390x. 740s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 740s Unpacking libopenmpi40:s390x (5.0.7-1) ... 740s Selecting previously unselected package openmpi-common. 740s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 740s Unpacking openmpi-common (5.0.7-1) ... 740s Selecting previously unselected package openmpi-bin. 740s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 740s Unpacking openmpi-bin (5.0.7-1) ... 740s Selecting previously unselected package mpi-default-bin. 740s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 740s Unpacking mpi-default-bin (1.18) ... 740s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 740s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ... 740s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 740s Selecting previously unselected package nwchem-data. 740s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ... 740s Unpacking nwchem-data (7.2.3-7build1) ... 740s Selecting previously unselected package nwchem-openmpi. 740s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ... 740s Unpacking nwchem-openmpi (7.2.3-7build1) ... 740s Setting up libpciaccess0:s390x (0.17-3build1) ... 740s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 740s Setting up nwchem-data (7.2.3-7build1) ... 740s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 740s Setting up libblas3:s390x (3.12.1-2) ... 740s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 740s Setting up libmunge2:s390x (0.5.16-1) ... 740s Setting up libhwloc15:s390x (2.12.0-1) ... 740s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ... 740s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 740s Setting up openmpi-common (5.0.7-1) ... 740s Setting up librdmacm1t64:s390x (55.0-1ubuntu1) ... 740s Setting up libfabric1:s390x (1.17.0-3.1) ... 740s Setting up liblapack3:s390x (3.12.1-2) ... 740s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 740s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 740s Setting up libpmix2t64:s390x (5.0.6-5) ... 740s Setting up libopenmpi40:s390x (5.0.7-1) ... 740s Setting up openmpi-bin (5.0.7-1) ... 740s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 740s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 740s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 740s Setting up mpi-default-bin (1.18) ... 740s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 740s Setting up nwchem-openmpi (7.2.3-7build1) ... 740s Processing triggers for man-db (2.13.0-1) ... 741s Processing triggers for libc-bin (2.41-1ubuntu2) ... 905s autopkgtest [16:12:50]: test testsuite-openmpi: [----------------------- 905s ===== TESTING NWCHEM BUILD FOR openmpi ===== 905s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 905s skipping extra tests on s390x 905s Skipping mpich tests on s390x due to flaky mpich support 905s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 906s autopkgtest [16:12:51]: test testsuite-openmpi: -----------------------] 906s testsuite-openmpi PASS 906s autopkgtest [16:12:51]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 907s autopkgtest [16:12:52]: test testsuite-mpich: preparing testbed 1013s autopkgtest [16:14:38]: testbed dpkg architecture: s390x 1014s autopkgtest [16:14:39]: testbed apt version: 2.9.33 1014s autopkgtest [16:14:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1014s autopkgtest [16:14:39]: testbed release detected to be: plucky 1015s autopkgtest [16:14:40]: updating testbed package index (apt update) 1015s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 1016s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1016s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1016s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1016s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 1016s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 1016s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 1016s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 1016s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 1016s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 1016s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 1017s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 1017s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 1017s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 1017s Fetched 1073 kB in 2s (586 kB/s) 1018s Reading package lists... 1019s + lsb_release --codename --short 1019s + RELEASE=plucky 1019s + cat 1019s + [ plucky != trusty ] 1019s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 1019s Reading package lists... 1019s Building dependency tree... 1019s Reading state information... 1019s Calculating upgrade... 1019s Calculating upgrade... 1019s The following packages were automatically installed and are no longer required: 1019s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 1019s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 1019s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 1019s linux-tools-6.11.0-8-generic 1019s Use 'sudo apt autoremove' to remove them. 1019s The following packages will be upgraded: 1019s pinentry-curses python3-jinja2 strace 1019s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1019s Need to get 652 kB of archives. 1019s After this operation, 27.6 kB of additional disk space will be used. 1019s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 1020s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 1020s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 1021s Fetched 652 kB in 1s (570 kB/s) 1021s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 1021s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 1021s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 1021s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 1021s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 1021s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 1021s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 1021s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 1021s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 1021s Setting up strace (6.13+ds-1ubuntu1) ... 1021s Processing triggers for man-db (2.13.0-1) ... 1022s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 1022s + /usr/lib/apt/apt-helper analyze-pattern ?true 1022s + uname -r 1022s + sed s/\./\\./g 1022s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 1022s + apt list ?obsolete 1022s + tail -n+2 1022s + cut -d/ -f1 1022s + grep -v ^linux-.*6\.14\.0-10-generic.* 1022s + obsolete_pkgs=linux-headers-6.11.0-8-generic 1022s linux-headers-6.11.0-8 1022s linux-modules-6.11.0-8-generic 1022s linux-tools-6.11.0-8-generic 1022s linux-tools-6.11.0-8 1022s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 1022s Reading package lists... 1022s Building dependency tree... 1022s Reading state information... 1022s Solving dependencies... 1022s The following packages will be REMOVED: 1022s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 1022s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 1022s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 1022s linux-tools-6.11.0-8-generic* 1022s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 1022s After this operation, 167 MB disk space will be freed. 1022s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 1022s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 1022s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 1022s Removing libpython3.12t64:s390x (3.12.9-1) ... 1022s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 1022s Removing libnsl2:s390x (1.3.0-3build3) ... 1022s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 1022s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 1022s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 1023s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 1023s Processing triggers for libc-bin (2.41-1ubuntu1) ... 1023s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 1023s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 1023s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 1023s + grep -q trusty /etc/lsb-release 1023s + [ ! -d /usr/share/doc/unattended-upgrades ] 1023s + [ ! -d /usr/share/doc/lxd ] 1023s + [ ! -d /usr/share/doc/lxd-client ] 1023s + [ ! -d /usr/share/doc/snapd ] 1023s + type iptables 1023s + cat 1023s + chmod 755 /etc/rc.local 1023s + . /etc/rc.local 1023s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 1023s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 1023s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 1023s + uname -m 1023s + [ s390x = ppc64le ] 1023s + [ -d /run/systemd/system ] 1023s + systemd-detect-virt --quiet --vm 1023s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 1024s + cat 1024s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 1024s + echo COMPRESS=lz4 1024s autopkgtest [16:14:49]: upgrading testbed (apt dist-upgrade and autopurge) 1024s Reading package lists... 1024s Building dependency tree... 1024s Reading state information... 1024s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1024s Starting 2 pkgProblemResolver with broken count: 0 1024s Done 1024s Entering ResolveByKeep 1024s 1024s Calculating upgrade... 1024s The following packages will be upgraded: 1024s libc-bin libc-dev-bin libc6 libc6-dev locales 1025s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1025s Need to get 9512 kB of archives. 1025s After this operation, 8192 B of additional disk space will be used. 1025s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 1027s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 1027s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 1030s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 1030s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 1035s Preconfiguring packages ... 1035s Fetched 9512 kB in 10s (948 kB/s) 1035s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 1035s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 1035s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1035s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 1035s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1035s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 1035s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1035s Setting up libc6:s390x (2.41-1ubuntu2) ... 1035s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 1035s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 1035s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1035s Setting up libc-bin (2.41-1ubuntu2) ... 1035s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 1035s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 1035s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1035s Setting up locales (2.41-1ubuntu2) ... 1036s Generating locales (this might take a while)... 1037s en_US.UTF-8... done 1037s Generation complete. 1037s Setting up libc-dev-bin (2.41-1ubuntu2) ... 1037s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 1037s Processing triggers for man-db (2.13.0-1) ... 1037s Processing triggers for systemd (257.3-1ubuntu3) ... 1038s Reading package lists... 1038s Building dependency tree... 1038s Reading state information... 1038s Starting pkgProblemResolver with broken count: 0 1038s Starting 2 pkgProblemResolver with broken count: 0 1038s Done 1039s Solving dependencies... 1039s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1039s autopkgtest [16:15:04]: rebooting testbed after setup commands that affected boot 1062s Reading package lists... 1062s Building dependency tree... 1062s Reading state information... 1062s Starting pkgProblemResolver with broken count: 0 1062s Starting 2 pkgProblemResolver with broken count: 0 1062s Done 1062s The following NEW packages will be installed: 1062s hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 1062s libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 libopenmpi40 1062s libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 libslurm42t64 1062s libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich 1062s ocl-icd-libopencl1 openmpi-bin openmpi-common 1062s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 1062s Need to get 32.5 MB of archives. 1062s After this operation, 159 MB of additional disk space will be used. 1062s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 1063s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 1063s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 55.0-1ubuntu1 [73.7 kB] 1063s Get:4 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 1064s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 1064s Get:6 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 1064s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 1068s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 1068s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 1068s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 1068s Get:11 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 1068s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 1068s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 1069s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 1072s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 1072s Get:16 http://ftpmaster.internal/ubuntu plucky/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 1072s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.18 [2510 B] 1072s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpich12 s390x 4.2.1-5 [1763 kB] 1074s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-mpich2.2 s390x 2.2.2-1ubuntu1 [1985 kB] 1076s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x libslurm42t64 s390x 24.11.1-1 [627 kB] 1077s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 1084s Get:22 http://ftpmaster.internal/ubuntu plucky/universe s390x hwloc-nox s390x 2.12.0-1 [224 kB] 1084s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x mpich s390x 4.2.1-5 [212 kB] 1085s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-mpich s390x 7.2.3-7build1 [13.6 MB] 1101s Fetched 32.5 MB in 38s (856 kB/s) 1101s Selecting previously unselected package libblas3:s390x. 1101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 1101s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 1101s Unpacking libblas3:s390x (3.12.1-2) ... 1101s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 1101s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 1101s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 1101s Selecting previously unselected package librdmacm1t64:s390x. 1101s Preparing to unpack .../02-librdmacm1t64_55.0-1ubuntu1_s390x.deb ... 1101s Unpacking librdmacm1t64:s390x (55.0-1ubuntu1) ... 1101s Selecting previously unselected package libfabric1:s390x. 1101s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 1101s Unpacking libfabric1:s390x (1.17.0-3.1) ... 1101s Selecting previously unselected package libgfortran5:s390x. 1101s Preparing to unpack .../04-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 1101s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 1101s Selecting previously unselected package libhwloc15:s390x. 1101s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 1101s Unpacking libhwloc15:s390x (2.12.0-1) ... 1101s Selecting previously unselected package liblapack3:s390x. 1101s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 1101s Unpacking liblapack3:s390x (3.12.1-2) ... 1101s Selecting previously unselected package libmunge2:s390x. 1101s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 1101s Unpacking libmunge2:s390x (0.5.16-1) ... 1101s Selecting previously unselected package libpciaccess0:s390x. 1101s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 1101s Unpacking libpciaccess0:s390x (0.17-3build1) ... 1101s Selecting previously unselected package libxnvctrl0:s390x. 1101s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 1101s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 1101s Selecting previously unselected package ocl-icd-libopencl1:s390x. 1101s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 1101s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 1101s Selecting previously unselected package libhwloc-plugins:s390x. 1101s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 1101s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 1101s Selecting previously unselected package libpmix2t64:s390x. 1101s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 1101s Unpacking libpmix2t64:s390x (5.0.6-5) ... 1101s Selecting previously unselected package libopenmpi40:s390x. 1101s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 1101s Unpacking libopenmpi40:s390x (5.0.7-1) ... 1101s Selecting previously unselected package openmpi-common. 1101s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 1101s Unpacking openmpi-common (5.0.7-1) ... 1101s Selecting previously unselected package openmpi-bin. 1101s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 1101s Unpacking openmpi-bin (5.0.7-1) ... 1101s Selecting previously unselected package mpi-default-bin. 1101s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 1101s Unpacking mpi-default-bin (1.18) ... 1101s Selecting previously unselected package libmpich12:s390x. 1101s Preparing to unpack .../17-libmpich12_4.2.1-5_s390x.deb ... 1101s Unpacking libmpich12:s390x (4.2.1-5) ... 1101s Selecting previously unselected package libscalapack-mpich2.2:s390x. 1101s Preparing to unpack .../18-libscalapack-mpich2.2_2.2.2-1ubuntu1_s390x.deb ... 1101s Unpacking libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ... 1101s Selecting previously unselected package libslurm42t64. 1101s Preparing to unpack .../19-libslurm42t64_24.11.1-1_s390x.deb ... 1101s Unpacking libslurm42t64 (24.11.1-1) ... 1101s Selecting previously unselected package nwchem-data. 1101s Preparing to unpack .../20-nwchem-data_7.2.3-7build1_all.deb ... 1101s Unpacking nwchem-data (7.2.3-7build1) ... 1101s Selecting previously unselected package hwloc-nox. 1101s Preparing to unpack .../21-hwloc-nox_2.12.0-1_s390x.deb ... 1101s Unpacking hwloc-nox (2.12.0-1) ... 1101s Selecting previously unselected package mpich. 1101s Preparing to unpack .../22-mpich_4.2.1-5_s390x.deb ... 1101s Unpacking mpich (4.2.1-5) ... 1101s Selecting previously unselected package nwchem-mpich. 1101s Preparing to unpack .../23-nwchem-mpich_7.2.3-7build1_s390x.deb ... 1101s Unpacking nwchem-mpich (7.2.3-7build1) ... 1102s Setting up libpciaccess0:s390x (0.17-3build1) ... 1102s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 1102s Setting up nwchem-data (7.2.3-7build1) ... 1102s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 1102s Setting up libblas3:s390x (3.12.1-2) ... 1102s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 1102s Setting up libmunge2:s390x (0.5.16-1) ... 1102s Setting up libslurm42t64 (24.11.1-1) ... 1102s Setting up libhwloc15:s390x (2.12.0-1) ... 1102s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ... 1102s Setting up libmpich12:s390x (4.2.1-5) ... 1102s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 1102s Setting up openmpi-common (5.0.7-1) ... 1102s Setting up librdmacm1t64:s390x (55.0-1ubuntu1) ... 1102s Setting up libfabric1:s390x (1.17.0-3.1) ... 1102s Setting up liblapack3:s390x (3.12.1-2) ... 1102s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 1102s Setting up hwloc-nox (2.12.0-1) ... 1102s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 1102s Setting up libpmix2t64:s390x (5.0.6-5) ... 1102s Setting up libopenmpi40:s390x (5.0.7-1) ... 1102s Setting up mpich (4.2.1-5) ... 1102s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 1102s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 1102s Setting up openmpi-bin (5.0.7-1) ... 1102s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 1102s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 1102s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 1102s Setting up mpi-default-bin (1.18) ... 1102s Setting up libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ... 1102s Setting up nwchem-mpich (7.2.3-7build1) ... 1102s Processing triggers for libc-bin (2.41-1ubuntu2) ... 1102s Processing triggers for man-db (2.13.0-1) ... 1257s autopkgtest [16:18:42]: test testsuite-mpich: [----------------------- 1257s ===== TESTING NWCHEM BUILD FOR mpich ===== 1257s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1257s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1257s skipping extra tests on s390x 1257s Skipping mpich tests on s390x due to flaky mpich support 1258s autopkgtest [16:18:43]: test testsuite-mpich: -----------------------] 1258s autopkgtest [16:18:43]: test testsuite-mpich: - - - - - - - - - - results - - - - - - - - - - 1258s testsuite-mpich PASS 1258s autopkgtest [16:18:43]: @@@@@@@@@@@@@@@@@@@@ summary 1258s testsuite.sh PASS 1258s testsuite-openmpi PASS 1258s testsuite-mpich PASS 1279s nova [W] Using flock in prodstack6-s390x 1279s Creating nova instance adt-plucky-s390x-nwchem-20250315-155744-juju-7f2275-prod-proposed-migration-environment-15-612ab1e2-f089-42f6-9d3d-a0cb1bc652fa from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 1279s nova [W] Timed out waiting for 111d3279-1f67-417f-9cdb-eeca487f69f4 to get deleted. 1279s nova [W] Using flock in prodstack6-s390x 1279s Creating nova instance adt-plucky-s390x-nwchem-20250315-155744-juju-7f2275-prod-proposed-migration-environment-15-612ab1e2-f089-42f6-9d3d-a0cb1bc652fa from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 1279s nova [W] Timed out waiting for 3f423337-4ac0-4ef3-a30d-65902d896c84 to get deleted. 1279s nova [W] Using flock in prodstack6-s390x 1279s Creating nova instance adt-plucky-s390x-nwchem-20250315-155744-juju-7f2275-prod-proposed-migration-environment-15-612ab1e2-f089-42f6-9d3d-a0cb1bc652fa from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 1279s nova [W] Timed out waiting for 6b10fa41-d635-495b-955a-c39b68fbfc96 to get deleted.