0s autopkgtest [23:13:58]: starting date and time: 2024-11-16 23:13:58+0000 0s autopkgtest [23:13:58]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [23:13:58]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.roml9q5x/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:openmpi,src:armci-mpi,src:murasaki --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=openmpi/5.0.5-6 armci-mpi/0.4-4 murasaki/1.68.6-14' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-6.secgroup --name adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 63s autopkgtest [23:15:01]: testbed dpkg architecture: s390x 63s autopkgtest [23:15:01]: testbed apt version: 2.9.8 63s autopkgtest [23:15:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 64s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 64s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [89.9 kB] 64s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [987 kB] 65s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 65s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 65s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [147 kB] 65s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [726 kB] 65s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4940 B] 65s Fetched 2051 kB in 1s (2465 kB/s) 65s Reading package lists... 67s Reading package lists... 67s Building dependency tree... 67s Reading state information... 67s Calculating upgrade... 67s The following NEW packages will be installed: 67s python3.13-gdbm 67s The following packages will be upgraded: 67s debianutils libftdi1-2 libnvme1t64 python3-gdbm 67s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 67s Need to get 248 kB of archives. 67s After this operation, 100 kB of additional disk space will be used. 67s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x debianutils s390x 5.21 [93.3 kB] 68s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 68s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 68s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libftdi1-2 s390x 1.5-7build1 [29.3 kB] 68s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libnvme1t64 s390x 1.11-2 [85.6 kB] 68s Fetched 248 kB in 0s (549 kB/s) 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 68s Preparing to unpack .../debianutils_5.21_s390x.deb ... 68s Unpacking debianutils (5.21) over (5.20) ... 68s Setting up debianutils (5.21) ... 68s Selecting previously unselected package python3.13-gdbm. 68s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 68s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ... 68s Unpacking python3.13-gdbm (3.13.0-2) ... 68s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ... 68s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 68s Preparing to unpack .../libftdi1-2_1.5-7build1_s390x.deb ... 68s Unpacking libftdi1-2:s390x (1.5-7build1) over (1.5-7) ... 68s Preparing to unpack .../libnvme1t64_1.11-2_s390x.deb ... 68s Unpacking libnvme1t64 (1.11-2) over (1.11-1) ... 68s Setting up libftdi1-2:s390x (1.5-7build1) ... 68s Setting up libnvme1t64 (1.11-2) ... 68s Setting up python3.13-gdbm (3.13.0-2) ... 68s Setting up python3-gdbm:s390x (3.12.7-1) ... 68s Processing triggers for man-db (2.13.0-1) ... 69s Processing triggers for libc-bin (2.40-1ubuntu3) ... 69s Reading package lists... 69s Building dependency tree... 69s Reading state information... 69s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 70s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 70s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 70s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 70s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 70s Reading package lists... 70s Reading package lists... 70s Building dependency tree... 70s Reading state information... 71s Calculating upgrade... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 73s autopkgtest [23:15:11]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 73s autopkgtest [23:15:11]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 81s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.2-2build1 (dsc) [2294 B] 81s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.2-2build1 (tar) [167 MB] 81s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.2-2build1 (diff) [559 kB] 81s gpgv: Signature made Thu Aug 1 18:16:59 2024 UTC 81s gpgv: using RSA key 883FEC247A03BE63B70FD5F920FB053CAF9559CF 81s gpgv: issuer "eeickmeyer@ubuntu.com" 81s gpgv: Can't check signature: No public key 81s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.2-2build1.dsc: no acceptable signature found 105s autopkgtest [23:15:43]: testing package nwchem version 7.2.2-2build1 105s autopkgtest [23:15:43]: build not needed 163s autopkgtest [23:16:41]: test testsuite.sh: preparing testbed 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Starting pkgProblemResolver with broken count: 0 165s Starting 2 pkgProblemResolver with broken count: 0 165s Done 165s The following additional packages will be installed: 165s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 165s libhwloc15 liblapack3 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 165s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin nwchem 165s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 165s Suggested packages: 165s scalapack-doc opencl-icd gfortran | fortran-compiler 165s The following NEW packages will be installed: 165s autopkgtest-satdep libblas3 libevent-pthreads-2.1-7t64 libfabric1 165s libgfortran5 libhwloc-plugins libhwloc15 liblapack3 libmunge2 libopenmpi3t64 165s libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 165s mpi-default-bin nwchem nwchem-data nwchem-openmpi ocl-icd-libopencl1 165s openmpi-bin openmpi-common 165s 0 upgraded, 22 newly installed, 0 to remove and 0 not upgraded. 165s Need to get 29.5 MB/29.5 MB of archives. 165s After this operation, 149 MB of additional disk space will be used. 165s Get:1 /tmp/autopkgtest.LZ83Tw/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [756 B] 165s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 166s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 166s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 52.0-2ubuntu1 [73.8 kB] 166s Get:5 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3ubuntu1 [558 kB] 166s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 166s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.11.2-1 [176 kB] 166s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 166s Get:9 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB] 166s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 166s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 166s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 166s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.11.2-1 [16.1 kB] 166s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.3-2 [718 kB] 166s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x libopenmpi3t64 s390x 5.0.5-6 [2104 kB] 166s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-common all 5.0.5-6 [95.6 kB] 166s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-bin s390x 5.0.5-6 [175 kB] 166s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.17 [2296 B] 166s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-openmpi2.2 s390x 2.2.1-3.1ubuntu2 [1953 kB] 166s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.2-2build1 [6082 kB] 166s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-openmpi s390x 7.2.2-2build1 [13.6 MB] 166s Get:22 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem all 7.2.2-2build1 [18.8 kB] 167s Fetched 29.5 MB in 1s (20.1 MB/s) 167s Selecting previously unselected package libblas3:s390x. 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55531 files and directories currently installed.) 167s Preparing to unpack .../00-libblas3_3.12.0-3build2_s390x.deb ... 167s Unpacking libblas3:s390x (3.12.0-3build2) ... 167s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 167s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 167s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 167s Selecting previously unselected package librdmacm1t64:s390x. 167s Preparing to unpack .../02-librdmacm1t64_52.0-2ubuntu1_s390x.deb ... 167s Unpacking librdmacm1t64:s390x (52.0-2ubuntu1) ... 167s Selecting previously unselected package libfabric1:s390x. 167s Preparing to unpack .../03-libfabric1_1.17.0-3ubuntu1_s390x.deb ... 167s Unpacking libfabric1:s390x (1.17.0-3ubuntu1) ... 167s Selecting previously unselected package libgfortran5:s390x. 167s Preparing to unpack .../04-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 167s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 167s Selecting previously unselected package libhwloc15:s390x. 167s Preparing to unpack .../05-libhwloc15_2.11.2-1_s390x.deb ... 167s Unpacking libhwloc15:s390x (2.11.2-1) ... 167s Selecting previously unselected package liblapack3:s390x. 167s Preparing to unpack .../06-liblapack3_3.12.0-3build2_s390x.deb ... 167s Unpacking liblapack3:s390x (3.12.0-3build2) ... 167s Selecting previously unselected package libmunge2:s390x. 167s Preparing to unpack .../07-libmunge2_0.5.15-4build1_s390x.deb ... 167s Unpacking libmunge2:s390x (0.5.15-4build1) ... 167s Selecting previously unselected package libpciaccess0:s390x. 167s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 167s Unpacking libpciaccess0:s390x (0.17-3build1) ... 167s Selecting previously unselected package libxnvctrl0:s390x. 167s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 167s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 167s Selecting previously unselected package ocl-icd-libopencl1:s390x. 167s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 167s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 167s Selecting previously unselected package libhwloc-plugins:s390x. 167s Preparing to unpack .../11-libhwloc-plugins_2.11.2-1_s390x.deb ... 167s Unpacking libhwloc-plugins:s390x (2.11.2-1) ... 167s Selecting previously unselected package libpmix2t64:s390x. 167s Preparing to unpack .../12-libpmix2t64_5.0.3-2_s390x.deb ... 167s Unpacking libpmix2t64:s390x (5.0.3-2) ... 167s Selecting previously unselected package libopenmpi3t64:s390x. 167s Preparing to unpack .../13-libopenmpi3t64_5.0.5-6_s390x.deb ... 167s Unpacking libopenmpi3t64:s390x (5.0.5-6) ... 167s Selecting previously unselected package openmpi-common. 167s Preparing to unpack .../14-openmpi-common_5.0.5-6_all.deb ... 167s Unpacking openmpi-common (5.0.5-6) ... 167s Selecting previously unselected package openmpi-bin. 167s Preparing to unpack .../15-openmpi-bin_5.0.5-6_s390x.deb ... 167s Unpacking openmpi-bin (5.0.5-6) ... 167s Selecting previously unselected package mpi-default-bin. 167s Preparing to unpack .../16-mpi-default-bin_1.17_s390x.deb ... 167s Unpacking mpi-default-bin (1.17) ... 167s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 167s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.1-3.1ubuntu2_s390x.deb ... 167s Unpacking libscalapack-openmpi2.2:s390x (2.2.1-3.1ubuntu2) ... 167s Selecting previously unselected package nwchem-data. 167s Preparing to unpack .../18-nwchem-data_7.2.2-2build1_all.deb ... 167s Unpacking nwchem-data (7.2.2-2build1) ... 167s Selecting previously unselected package nwchem-openmpi. 167s Preparing to unpack .../19-nwchem-openmpi_7.2.2-2build1_s390x.deb ... 167s Unpacking nwchem-openmpi (7.2.2-2build1) ... 168s Selecting previously unselected package nwchem. 168s Preparing to unpack .../20-nwchem_7.2.2-2build1_all.deb ... 168s Unpacking nwchem (7.2.2-2build1) ... 168s Selecting previously unselected package autopkgtest-satdep. 168s Preparing to unpack .../21-1-autopkgtest-satdep.deb ... 168s Unpacking autopkgtest-satdep (0) ... 168s Setting up libpciaccess0:s390x (0.17-3build1) ... 168s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 168s Setting up nwchem-data (7.2.2-2build1) ... 168s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 168s Setting up libblas3:s390x (3.12.0-3build2) ... 168s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 168s Setting up libmunge2:s390x (0.5.15-4build1) ... 168s Setting up libhwloc15:s390x (2.11.2-1) ... 168s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 168s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 168s Setting up openmpi-common (5.0.5-6) ... 168s Setting up librdmacm1t64:s390x (52.0-2ubuntu1) ... 168s Setting up libfabric1:s390x (1.17.0-3ubuntu1) ... 168s Setting up liblapack3:s390x (3.12.0-3build2) ... 168s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 168s Setting up libhwloc-plugins:s390x (2.11.2-1) ... 168s Setting up libpmix2t64:s390x (5.0.3-2) ... 168s Setting up libopenmpi3t64:s390x (5.0.5-6) ... 168s Setting up openmpi-bin (5.0.5-6) ... 168s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 168s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 168s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 168s Setting up mpi-default-bin (1.17) ... 168s Setting up libscalapack-openmpi2.2:s390x (2.2.1-3.1ubuntu2) ... 168s Setting up nwchem-openmpi (7.2.2-2build1) ... 168s Setting up nwchem (7.2.2-2build1) ... 168s Setting up autopkgtest-satdep (0) ... 168s Processing triggers for man-db (2.13.0-1) ... 168s Processing triggers for libc-bin (2.40-1ubuntu3) ... 170s (Reading database ... 57497 files and directories currently installed.) 170s Removing autopkgtest-satdep (0) ... 170s autopkgtest [23:16:48]: test testsuite.sh: [----------------------- 170s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 170s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 170s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 170s skipping extra tests on s390x 170s 170s 170s Running tests/dft_he2+/dft_he2+ 170s 170s cleaning scratch 170s copying input and verified output files 170s running nwchem (/usr/bin/nwchem) with 1 processors 170s 198s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 198s OK 198s 198s Running tests/qmmm_grad0/qmmm_grad0 198s 198s cleaning scratch 198s copying input and verified output files 198s running nwchem (/usr/bin/nwchem) with 1 processors 198s 203s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 203s OK 203s 203s Running tests/auh2o/auh2o 203s 203s cleaning scratch 203s copying input and verified output files 203s running nwchem (/usr/bin/nwchem) with 1 processors 203s 206s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 206s OK 206s 206s Running tests/autosym/autosym 206s 206s cleaning scratch 206s copying input and verified output files 206s running nwchem (/usr/bin/nwchem) with 1 processors 206s 230s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 230s OK 230s 230s Running tests/h2mp2/h2mp2 230s 230s cleaning scratch 230s copying input and verified output files 230s running nwchem (/usr/bin/nwchem) with 1 processors 230s 235s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 235s OK 235s 235s Running tests/h2o/h2o 235s 235s cleaning scratch 235s copying input and verified output files 235s running nwchem (/usr/bin/nwchem) with 1 processors 235s 236s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 236s OK 236s 236s Running tests/hess_h2o/hess_h2o 236s 236s cleaning scratch 236s copying input and verified output files 236s running nwchem (/usr/bin/nwchem) with 1 processors 236s 248s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 248s OK 248s 248s Running tests/prop_h2o/prop_h2o 248s 248s cleaning scratch 248s copying input and verified output files 248s running nwchem (/usr/bin/nwchem) with 1 processors 248s 254s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 254s OK 254s 254s Running tests/geom_zmatrix/geom_zmatrix 254s 254s cleaning scratch 254s copying input and verified output files 254s running nwchem (/usr/bin/nwchem) with 1 processors 254s 259s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 259s OK 259s 259s Running tests/rimp2_ne/rimp2_ne 259s 259s cleaning scratch 259s copying input and verified output files 259s running nwchem (/usr/bin/nwchem) with 1 processors 259s 264s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 264s OK 264s 264s Running tests/small_intchk/small_intchk 264s 264s cleaning scratch 264s copying input and verified output files 264s running nwchem (/usr/bin/nwchem) with 1 processors 264s 274s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 274s OK 274s 274s Running tests/tagcheck/tagcheck 274s 274s cleaning scratch 274s copying input and verified output files 274s running nwchem (/usr/bin/nwchem) with 1 processors 274s 278s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 278s OK 278s 278s Running tests/testtab/testtab 278s 278s cleaning scratch 278s copying input and verified output files 278s running nwchem (/usr/bin/nwchem) with 1 processors 278s 279s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 279s OK 279s 279s Running tests/h2o_dk/h2o_dk 279s 279s cleaning scratch 279s copying input and verified output files 279s running nwchem (/usr/bin/nwchem) with 1 processors 279s 285s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 285s OK 285s 285s Running tests/cosmo_h2o/cosmo_h2o 285s 285s cleaning scratch 285s copying input and verified output files 285s running nwchem (/usr/bin/nwchem) with 1 processors 285s 288s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 288s OK 288s 288s Running tests/ch5n_nbo/ch5n_nbo 288s 288s cleaning scratch 288s copying input and verified output files 288s running nwchem (/usr/bin/nwchem) with 1 processors 288s 289s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 289s OK 289s 289s Running tests/h2s_finite/h2s_finite 289s 289s cleaning scratch 289s copying input and verified output files 289s running nwchem (/usr/bin/nwchem) with 1 processors 289s 295s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 295s OK 295s 295s Running tests/pyqa3/pyqa3 295s 295s cleaning scratch 295s copying input and verified output files 295s running nwchem (/usr/bin/nwchem) with 1 processors 295s 302s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 302s OK 302s 302s Running tests/startag/startag 302s 302s cleaning scratch 302s copying input and verified output files 302s running nwchem (/usr/bin/nwchem) with 1 processors 302s 304s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 304s OK 304s 304s Running tests/esp/esp 304s 304s cleaning scratch 304s copying input and verified output files 304s running nwchem (/usr/bin/nwchem) with 1 processors 304s 307s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 307s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 3060 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.ok.q > esp_temp.ok.q 307s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 3067 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.q > esp_temp.q 307s ESP charges match 307s 307s 307s Running tests/esp_uhf/esp_uhf 307s 307s cleaning scratch 307s copying input and verified output files 307s running nwchem (/usr/bin/nwchem) with 1 processors 307s 312s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 312s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 3103 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.ok.q > esp_temp.ok.q 312s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 3109 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.q > esp_temp.q 312s ESP charges match 312s 312s 312s Running tests/dft_bsse/dft_bsse 312s 312s cleaning scratch 312s copying input and verified output files 312s running nwchem (/usr/bin/nwchem) with 1 processors 312s 318s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 318s OK 318s 318s Running tests/dplot_dft/dplot_dft 318s 318s cleaning scratch 318s copying input and verified output files 318s running nwchem (/usr/bin/nwchem) with 1 processors 318s 320s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 320s OK 320s 320s Running tests/dft_meta/dft_meta 320s 320s cleaning scratch 320s copying input and verified output files 320s running nwchem (/usr/bin/nwchem) with 1 processors 320s 383s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 383s OK 383s 383s Running tests/dft_mpwb1khf/dft_mpwb1khf 383s 383s cleaning scratch 383s copying input and verified output files 383s running nwchem (/usr/bin/nwchem) with 1 processors 383s 389s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 389s OK 389s 389s Running tests/prop_uhf_h2o/prop_uhf_h2o 389s 389s cleaning scratch 389s copying input and verified output files 389s running nwchem (/usr/bin/nwchem) with 1 processors 389s 440s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 440s OK 440s 440s Running tests/et_zn_dimer/et_zn_dimer 440s 440s cleaning scratch 440s copying input and verified output files 440s running nwchem (/usr/bin/nwchem) with 1 processors 440s 472s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 472s OK 472s 472s Running tests/vectors_rotate/vectors_rotate 472s 472s cleaning scratch 472s copying input and verified output files 472s running nwchem (/usr/bin/nwchem) with 1 processors 472s 476s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 476s OK 476s 476s Running tests/sad_ch3hf/sad_ch3hf 476s 476s cleaning scratch 476s copying input and verified output files 476s running nwchem (/usr/bin/nwchem) with 1 processors 476s 503s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 503s OK 503s 503s Running tests/band/band 503s 503s cleaning scratch 503s copying input and verified output files 503s running nwchem (/usr/bin/nwchem) with 1 processors 503s 513s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 513s OK 513s 513s Running tests/pspw/pspw 513s 513s cleaning scratch 513s copying input and verified output files 513s running nwchem (/usr/bin/nwchem) with 1 processors 513s 530s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 530s OK 530s 530s Running tests/pspw_stress/pspw_stress 530s 530s cleaning scratch 530s copying input and verified output files 530s running nwchem (/usr/bin/nwchem) with 1 processors 530s 550s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 550s OK 550s 550s Running tests/mcscf_ch2/mcscf_ch2 550s 550s cleaning scratch 550s copying input and verified output files 550s running nwchem (/usr/bin/nwchem) with 1 processors 550s 604s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 604s OK 604s 604s Running tests/dft_li2freq/dft_li2freq 604s 604s cleaning scratch 604s copying input and verified output files 604s running nwchem (/usr/bin/nwchem) with 1 processors 604s 681s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 681s OK 681s 681s Running tests/n2_ccsd/n2_ccsd 681s 681s cleaning scratch 681s copying input and verified output files 681s running nwchem (/usr/bin/nwchem) with 1 processors 681s 736s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 736s OK 736s 736s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 736s 736s cleaning scratch 736s copying input and verified output files 736s running nwchem (/usr/bin/nwchem) with 1 processors 736s 739s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 739s OK 739s 739s Running tests/tddft_h2o/tddft_h2o 739s 739s cleaning scratch 739s copying input and verified output files 739s running nwchem (/usr/bin/nwchem) with 1 processors 739s 786s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 786s OK 786s 786s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 786s 786s cleaning scratch 786s copying input and verified output files 786s running nwchem (/usr/bin/nwchem) with 1 processors 786s 1332s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1332s OK 1332s 1332s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 1332s 1332s cleaning scratch 1332s copying input and verified output files 1332s running nwchem (/usr/bin/nwchem) with 1 processors 1332s 1354s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1354s OK 1354s 1354s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 1354s 1354s cleaning scratch 1354s copying input and verified output files 1354s running nwchem (/usr/bin/nwchem) with 1 processors 1354s 1359s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1359s OK 1359s 1359s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 1359s 1359s cleaning scratch 1359s copying input and verified output files 1359s running nwchem (/usr/bin/nwchem) with 1 processors 1359s 1409s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1409s OK 1409s 1409s Running tests/mp2_scs_n2/mp2_scs_n2 1409s 1409s cleaning scratch 1409s copying input and verified output files 1409s running nwchem (/usr/bin/nwchem) with 1 processors 1409s 1431s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1431s OK 1431s 1431s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 1431s 1431s cleaning scratch 1431s copying input and verified output files 1431s running nwchem (/usr/bin/nwchem) with 1 processors 1431s 1484s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1484s OK 1484s 1484s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 1484s 1484s cleaning scratch 1484s copying input and verified output files 1484s running nwchem (/usr/bin/nwchem) with 1 processors 1484s 1498s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1498s OK 1498s 1498s Running tests/water/water_md 1498s 1498s cleaning scratch 1498s copying input and verified output files 1498s running nwchem (/usr/bin/nwchem) with 1 processors 1498s 1498s verifying nwout ...... skipped 1498s verifying test ....... completed 1498s 1498s Running tests/water/water_pme 1498s 1498s cleaning scratch 1498s copying input and verified output files 1498s running nwchem (/usr/bin/nwchem) with 1 processors 1498s 1498s verifying nwout ...... skipped 1498s verifying test ....... completed 1498s 1498s OK 1499s autopkgtest [23:38:57]: test testsuite.sh: -----------------------] 1499s autopkgtest [23:38:57]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 1499s testsuite.sh PASS 1500s autopkgtest [23:38:58]: test testsuite-openmpi: preparing testbed 1577s autopkgtest [23:40:15]: testbed dpkg architecture: s390x 1577s autopkgtest [23:40:15]: testbed apt version: 2.9.8 1577s autopkgtest [23:40:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1578s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 1578s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [987 kB] 1579s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 1579s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [89.9 kB] 1579s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 1579s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [147 kB] 1579s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [726 kB] 1579s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4940 B] 1579s Fetched 2051 kB in 1s (2761 kB/s) 1579s Reading package lists... 1580s Reading package lists... 1581s Building dependency tree... 1581s Reading state information... 1581s Calculating upgrade... 1581s The following NEW packages will be installed: 1581s python3.13-gdbm 1581s The following packages will be upgraded: 1581s debianutils libftdi1-2 libnvme1t64 python3-gdbm 1581s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 1581s Need to get 248 kB of archives. 1581s After this operation, 100 kB of additional disk space will be used. 1581s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x debianutils s390x 5.21 [93.3 kB] 1581s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 1581s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 1581s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libftdi1-2 s390x 1.5-7build1 [29.3 kB] 1581s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libnvme1t64 s390x 1.11-2 [85.6 kB] 1581s Fetched 248 kB in 0s (617 kB/s) 1582s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 1582s Preparing to unpack .../debianutils_5.21_s390x.deb ... 1582s Unpacking debianutils (5.21) over (5.20) ... 1582s Setting up debianutils (5.21) ... 1582s Selecting previously unselected package python3.13-gdbm. 1582s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 1582s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ... 1582s Unpacking python3.13-gdbm (3.13.0-2) ... 1582s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ... 1582s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 1582s Preparing to unpack .../libftdi1-2_1.5-7build1_s390x.deb ... 1582s Unpacking libftdi1-2:s390x (1.5-7build1) over (1.5-7) ... 1582s Preparing to unpack .../libnvme1t64_1.11-2_s390x.deb ... 1582s Unpacking libnvme1t64 (1.11-2) over (1.11-1) ... 1582s Setting up libftdi1-2:s390x (1.5-7build1) ... 1582s Setting up libnvme1t64 (1.11-2) ... 1582s Setting up python3.13-gdbm (3.13.0-2) ... 1582s Setting up python3-gdbm:s390x (3.12.7-1) ... 1582s Processing triggers for man-db (2.13.0-1) ... 1582s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1583s Reading package lists... 1583s Building dependency tree... 1583s Reading state information... 1583s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1583s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 1583s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1583s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1583s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1584s Reading package lists... 1584s Reading package lists... 1584s Building dependency tree... 1584s Reading state information... 1584s Calculating upgrade... 1584s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1584s Reading package lists... 1585s Building dependency tree... 1585s Reading state information... 1585s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1588s Reading package lists... 1588s Building dependency tree... 1588s Reading state information... 1589s Starting pkgProblemResolver with broken count: 0 1589s Starting 2 pkgProblemResolver with broken count: 0 1589s Done 1589s The following additional packages will be installed: 1589s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 1589s libhwloc15 liblapack3 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 1589s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin 1589s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 1589s Suggested packages: 1589s scalapack-doc opencl-icd gfortran | fortran-compiler 1589s The following NEW packages will be installed: 1589s autopkgtest-satdep libblas3 libevent-pthreads-2.1-7t64 libfabric1 1589s libgfortran5 libhwloc-plugins libhwloc15 liblapack3 libmunge2 libopenmpi3t64 1589s libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 1589s mpi-default-bin nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin 1589s openmpi-common 1589s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded. 1589s Need to get 29.5 MB/29.5 MB of archives. 1589s After this operation, 149 MB of additional disk space will be used. 1589s Get:1 /tmp/autopkgtest.LZ83Tw/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [760 B] 1589s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 1589s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 1589s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 52.0-2ubuntu1 [73.8 kB] 1589s Get:5 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3ubuntu1 [558 kB] 1589s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 1589s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.11.2-1 [176 kB] 1589s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 1589s Get:9 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB] 1589s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 1589s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 1589s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 1589s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.11.2-1 [16.1 kB] 1589s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.3-2 [718 kB] 1589s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x libopenmpi3t64 s390x 5.0.5-6 [2104 kB] 1590s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-common all 5.0.5-6 [95.6 kB] 1590s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-bin s390x 5.0.5-6 [175 kB] 1590s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.17 [2296 B] 1590s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-openmpi2.2 s390x 2.2.1-3.1ubuntu2 [1953 kB] 1590s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.2-2build1 [6082 kB] 1590s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-openmpi s390x 7.2.2-2build1 [13.6 MB] 1590s Fetched 29.5 MB in 1s (22.1 MB/s) 1590s Selecting previously unselected package libblas3:s390x. 1590s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55531 files and directories currently installed.) 1590s Preparing to unpack .../00-libblas3_3.12.0-3build2_s390x.deb ... 1590s Unpacking libblas3:s390x (3.12.0-3build2) ... 1590s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 1590s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 1590s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 1590s Selecting previously unselected package librdmacm1t64:s390x. 1590s Preparing to unpack .../02-librdmacm1t64_52.0-2ubuntu1_s390x.deb ... 1590s Unpacking librdmacm1t64:s390x (52.0-2ubuntu1) ... 1590s Selecting previously unselected package libfabric1:s390x. 1590s Preparing to unpack .../03-libfabric1_1.17.0-3ubuntu1_s390x.deb ... 1590s Unpacking libfabric1:s390x (1.17.0-3ubuntu1) ... 1590s Selecting previously unselected package libgfortran5:s390x. 1590s Preparing to unpack .../04-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 1590s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 1590s Selecting previously unselected package libhwloc15:s390x. 1590s Preparing to unpack .../05-libhwloc15_2.11.2-1_s390x.deb ... 1590s Unpacking libhwloc15:s390x (2.11.2-1) ... 1590s Selecting previously unselected package liblapack3:s390x. 1590s Preparing to unpack .../06-liblapack3_3.12.0-3build2_s390x.deb ... 1590s Unpacking liblapack3:s390x (3.12.0-3build2) ... 1590s Selecting previously unselected package libmunge2:s390x. 1590s Preparing to unpack .../07-libmunge2_0.5.15-4build1_s390x.deb ... 1590s Unpacking libmunge2:s390x (0.5.15-4build1) ... 1590s Selecting previously unselected package libpciaccess0:s390x. 1590s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 1590s Unpacking libpciaccess0:s390x (0.17-3build1) ... 1590s Selecting previously unselected package libxnvctrl0:s390x. 1590s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 1590s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 1590s Selecting previously unselected package ocl-icd-libopencl1:s390x. 1590s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 1590s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 1590s Selecting previously unselected package libhwloc-plugins:s390x. 1590s Preparing to unpack .../11-libhwloc-plugins_2.11.2-1_s390x.deb ... 1590s Unpacking libhwloc-plugins:s390x (2.11.2-1) ... 1590s Selecting previously unselected package libpmix2t64:s390x. 1590s Preparing to unpack .../12-libpmix2t64_5.0.3-2_s390x.deb ... 1590s Unpacking libpmix2t64:s390x (5.0.3-2) ... 1590s Selecting previously unselected package libopenmpi3t64:s390x. 1590s Preparing to unpack .../13-libopenmpi3t64_5.0.5-6_s390x.deb ... 1590s Unpacking libopenmpi3t64:s390x (5.0.5-6) ... 1590s Selecting previously unselected package openmpi-common. 1590s Preparing to unpack .../14-openmpi-common_5.0.5-6_all.deb ... 1590s Unpacking openmpi-common (5.0.5-6) ... 1591s Selecting previously unselected package openmpi-bin. 1591s Preparing to unpack .../15-openmpi-bin_5.0.5-6_s390x.deb ... 1591s Unpacking openmpi-bin (5.0.5-6) ... 1591s Selecting previously unselected package mpi-default-bin. 1591s Preparing to unpack .../16-mpi-default-bin_1.17_s390x.deb ... 1591s Unpacking mpi-default-bin (1.17) ... 1591s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 1591s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.1-3.1ubuntu2_s390x.deb ... 1591s Unpacking libscalapack-openmpi2.2:s390x (2.2.1-3.1ubuntu2) ... 1591s Selecting previously unselected package nwchem-data. 1591s Preparing to unpack .../18-nwchem-data_7.2.2-2build1_all.deb ... 1591s Unpacking nwchem-data (7.2.2-2build1) ... 1591s Selecting previously unselected package nwchem-openmpi. 1591s Preparing to unpack .../19-nwchem-openmpi_7.2.2-2build1_s390x.deb ... 1591s Unpacking nwchem-openmpi (7.2.2-2build1) ... 1591s Selecting previously unselected package autopkgtest-satdep. 1591s Preparing to unpack .../20-2-autopkgtest-satdep.deb ... 1591s Unpacking autopkgtest-satdep (0) ... 1591s Setting up libpciaccess0:s390x (0.17-3build1) ... 1591s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 1591s Setting up nwchem-data (7.2.2-2build1) ... 1591s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 1591s Setting up libblas3:s390x (3.12.0-3build2) ... 1591s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 1591s Setting up libmunge2:s390x (0.5.15-4build1) ... 1591s Setting up libhwloc15:s390x (2.11.2-1) ... 1591s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 1591s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 1591s Setting up openmpi-common (5.0.5-6) ... 1591s Setting up librdmacm1t64:s390x (52.0-2ubuntu1) ... 1591s Setting up libfabric1:s390x (1.17.0-3ubuntu1) ... 1591s Setting up liblapack3:s390x (3.12.0-3build2) ... 1591s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 1591s Setting up libhwloc-plugins:s390x (2.11.2-1) ... 1591s Setting up libpmix2t64:s390x (5.0.3-2) ... 1591s Setting up libopenmpi3t64:s390x (5.0.5-6) ... 1591s Setting up openmpi-bin (5.0.5-6) ... 1591s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 1591s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 1591s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 1591s Setting up mpi-default-bin (1.17) ... 1591s Setting up libscalapack-openmpi2.2:s390x (2.2.1-3.1ubuntu2) ... 1591s Setting up nwchem-openmpi (7.2.2-2build1) ... 1591s Setting up autopkgtest-satdep (0) ... 1591s Processing triggers for man-db (2.13.0-1) ... 1591s Processing triggers for libc-bin (2.40-1ubuntu3) ... 1593s (Reading database ... 57428 files and directories currently installed.) 1593s Removing autopkgtest-satdep (0) ... 1699s autopkgtest [23:42:17]: test testsuite-openmpi: [----------------------- 1699s ===== TESTING NWCHEM BUILD FOR openmpi ===== 1699s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1699s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1699s skipping extra tests on s390x 1699s 1699s 1699s Running tests/dft_he2+/dft_he2+ 1699s 1699s cleaning scratch 1699s copying input and verified output files 1699s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1699s 1726s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1726s OK 1726s 1726s Running tests/qmmm_grad0/qmmm_grad0 1726s 1726s cleaning scratch 1726s copying input and verified output files 1726s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1726s 1732s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1732s OK 1732s 1732s Running tests/auh2o/auh2o 1732s 1732s cleaning scratch 1732s copying input and verified output files 1732s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1732s 1735s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1735s OK 1735s 1735s Running tests/autosym/autosym 1735s 1735s cleaning scratch 1735s copying input and verified output files 1735s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1735s 1758s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1758s OK 1758s 1758s Running tests/h2mp2/h2mp2 1758s 1758s cleaning scratch 1758s copying input and verified output files 1758s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1758s 1763s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1763s OK 1763s 1763s Running tests/h2o/h2o 1763s 1763s cleaning scratch 1763s copying input and verified output files 1763s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1763s 1764s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1764s OK 1764s 1764s Running tests/hess_h2o/hess_h2o 1764s 1764s cleaning scratch 1764s copying input and verified output files 1764s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1764s 1775s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1775s OK 1775s 1775s Running tests/prop_h2o/prop_h2o 1775s 1775s cleaning scratch 1775s copying input and verified output files 1775s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1775s 1782s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1782s OK 1782s 1782s Running tests/geom_zmatrix/geom_zmatrix 1782s 1782s cleaning scratch 1782s copying input and verified output files 1782s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1782s 1787s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1787s OK 1787s 1787s Running tests/rimp2_ne/rimp2_ne 1787s 1787s cleaning scratch 1787s copying input and verified output files 1787s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1787s 1791s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1791s OK 1791s 1791s Running tests/small_intchk/small_intchk 1791s 1791s cleaning scratch 1791s copying input and verified output files 1791s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1791s 1801s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1801s OK 1801s 1801s Running tests/tagcheck/tagcheck 1801s 1801s cleaning scratch 1801s copying input and verified output files 1801s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1801s 1805s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1805s OK 1805s 1805s Running tests/testtab/testtab 1805s 1805s cleaning scratch 1805s copying input and verified output files 1805s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1805s 1806s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1806s OK 1806s 1806s Running tests/h2o_dk/h2o_dk 1806s 1806s cleaning scratch 1806s copying input and verified output files 1806s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1806s 1812s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1812s OK 1812s 1812s Running tests/cosmo_h2o/cosmo_h2o 1812s 1812s cleaning scratch 1812s copying input and verified output files 1812s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1812s 1815s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1815s OK 1815s 1815s Running tests/ch5n_nbo/ch5n_nbo 1815s 1815s cleaning scratch 1815s copying input and verified output files 1815s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1815s 1816s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1816s OK 1816s 1816s Running tests/h2s_finite/h2s_finite 1816s 1816s cleaning scratch 1816s copying input and verified output files 1816s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1816s 1821s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1821s OK 1821s 1821s Running tests/pyqa3/pyqa3 1821s 1821s cleaning scratch 1821s copying input and verified output files 1821s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1821s 1828s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1828s OK 1828s 1828s Running tests/startag/startag 1828s 1828s cleaning scratch 1828s copying input and verified output files 1828s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1828s 1830s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1830s OK 1830s 1830s Running tests/esp/esp 1830s 1830s cleaning scratch 1830s copying input and verified output files 1830s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1830s 1833s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1833s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 2835 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.ok.q > esp_temp.ok.q 1833s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 2842 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.q > esp_temp.q 1833s ESP charges match 1833s 1833s 1833s Running tests/esp_uhf/esp_uhf 1833s 1833s cleaning scratch 1833s copying input and verified output files 1833s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1833s 1838s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1838s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 2878 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.ok.q > esp_temp.ok.q 1838s ESP charges match 1838s /tmp/autopkgtest.LZ83Tw/build.znH/src/QA/runtests.mpi.unix: line 159: 2884 Segmentation fault (core dumped) ${ROUND_ESP} ${STUB}.q > esp_temp.q 1838s 1838s 1838s Running tests/dft_bsse/dft_bsse 1838s 1838s cleaning scratch 1838s copying input and verified output files 1838s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1838s 1844s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1844s OK 1844s 1844s Running tests/dplot_dft/dplot_dft 1844s 1844s cleaning scratch 1844s copying input and verified output files 1844s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1844s 1846s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1846s OK 1846s 1846s Running tests/dft_meta/dft_meta 1846s 1846s cleaning scratch 1846s copying input and verified output files 1846s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1846s 1908s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1908s OK 1908s 1908s Running tests/dft_mpwb1khf/dft_mpwb1khf 1908s 1908s cleaning scratch 1908s copying input and verified output files 1908s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1908s 1914s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1914s OK 1914s 1914s Running tests/prop_uhf_h2o/prop_uhf_h2o 1914s 1914s cleaning scratch 1914s copying input and verified output files 1914s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1914s 1964s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1964s OK 1964s 1964s Running tests/et_zn_dimer/et_zn_dimer 1964s 1964s cleaning scratch 1964s copying input and verified output files 1964s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1964s 1996s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1996s OK 1996s 1996s Running tests/vectors_rotate/vectors_rotate 1996s 1996s cleaning scratch 1996s copying input and verified output files 1996s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1996s 2000s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2000s OK 2000s 2000s Running tests/sad_ch3hf/sad_ch3hf 2000s 2000s cleaning scratch 2000s copying input and verified output files 2000s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2000s 2027s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2027s OK 2027s 2027s Running tests/band/band 2027s 2027s cleaning scratch 2027s copying input and verified output files 2027s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2027s 2037s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2037s OK 2037s 2037s Running tests/pspw/pspw 2037s 2037s cleaning scratch 2037s copying input and verified output files 2037s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2037s 2054s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2054s OK 2054s 2054s Running tests/pspw_stress/pspw_stress 2054s 2054s cleaning scratch 2054s copying input and verified output files 2054s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2054s 2075s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2075s OK 2075s 2075s Running tests/mcscf_ch2/mcscf_ch2 2075s 2075s cleaning scratch 2075s copying input and verified output files 2075s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2075s 2128s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2128s OK 2128s 2128s Running tests/dft_li2freq/dft_li2freq 2128s 2128s cleaning scratch 2128s copying input and verified output files 2128s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2128s 2204s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2204s OK 2204s 2204s Running tests/n2_ccsd/n2_ccsd 2204s 2204s cleaning scratch 2204s copying input and verified output files 2204s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2204s 2259s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2259s OK 2259s 2259s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 2259s 2259s cleaning scratch 2259s copying input and verified output files 2259s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2259s 2262s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2262s OK 2262s 2262s Running tests/tddft_h2o/tddft_h2o 2262s 2262s cleaning scratch 2262s copying input and verified output files 2262s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2262s 2310s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2310s OK 2310s 2310s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 2310s 2310s cleaning scratch 2310s copying input and verified output files 2310s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2310s 2862s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2862s OK 2862s 2862s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 2862s 2862s cleaning scratch 2862s copying input and verified output files 2862s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2862s 2885s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2885s OK 2885s 2885s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 2885s 2885s cleaning scratch 2885s copying input and verified output files 2885s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2885s 2890s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2890s OK 2890s 2890s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 2890s 2890s cleaning scratch 2890s copying input and verified output files 2890s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2890s 2940s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2940s OK 2940s 2940s Running tests/mp2_scs_n2/mp2_scs_n2 2940s 2940s cleaning scratch 2940s copying input and verified output files 2940s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2940s 2963s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2963s OK 2963s 2963s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 2963s 2963s cleaning scratch 2963s copying input and verified output files 2963s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2963s 3017s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3017s OK 3017s 3017s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 3017s 3017s cleaning scratch 3017s copying input and verified output files 3017s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3017s 3030s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3030s OK 3030s 3030s Running tests/water/water_md 3030s 3030s cleaning scratch 3030s copying input and verified output files 3030s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3030s 3031s verifying nwout ...... skipped 3031s verifying test ....... completed 3031s 3031s Running tests/water/water_pme 3031s 3031s cleaning scratch 3031s copying input and verified output files 3031s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3031s 3031s verifying nwout ...... skipped 3031s verifying test ....... completed 3031s 3031s OK 3031s autopkgtest [00:04:29]: test testsuite-openmpi: -----------------------] 3032s autopkgtest [00:04:30]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 3032s testsuite-openmpi PASS 3032s autopkgtest [00:04:30]: test testsuite-mpich: preparing testbed 3090s autopkgtest [00:05:28]: testbed dpkg architecture: s390x 3091s autopkgtest [00:05:29]: testbed apt version: 2.9.8 3091s autopkgtest [00:05:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 3091s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 3092s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 3092s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [983 kB] 3092s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 3092s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [89.9 kB] 3092s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [147 kB] 3092s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [722 kB] 3092s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4940 B] 3092s Fetched 2044 kB in 1s (2519 kB/s) 3092s Reading package lists... 3094s Reading package lists... 3094s Building dependency tree... 3094s Reading state information... 3094s Calculating upgrade... 3094s The following NEW packages will be installed: 3094s python3.13-gdbm 3094s The following packages will be upgraded: 3094s debianutils libftdi1-2 libnvme1t64 python3-gdbm 3094s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 3094s Need to get 248 kB of archives. 3094s After this operation, 100 kB of additional disk space will be used. 3094s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x debianutils s390x 5.21 [93.3 kB] 3095s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 3095s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 3095s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libftdi1-2 s390x 1.5-7build1 [29.3 kB] 3095s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libnvme1t64 s390x 1.11-2 [85.6 kB] 3095s Fetched 248 kB in 0s (544 kB/s) 3095s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 3095s Preparing to unpack .../debianutils_5.21_s390x.deb ... 3095s Unpacking debianutils (5.21) over (5.20) ... 3095s Setting up debianutils (5.21) ... 3095s Selecting previously unselected package python3.13-gdbm. 3095s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55524 files and directories currently installed.) 3095s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ... 3095s Unpacking python3.13-gdbm (3.13.0-2) ... 3095s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ... 3095s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 3095s Preparing to unpack .../libftdi1-2_1.5-7build1_s390x.deb ... 3095s Unpacking libftdi1-2:s390x (1.5-7build1) over (1.5-7) ... 3095s Preparing to unpack .../libnvme1t64_1.11-2_s390x.deb ... 3095s Unpacking libnvme1t64 (1.11-2) over (1.11-1) ... 3095s Setting up libftdi1-2:s390x (1.5-7build1) ... 3095s Setting up libnvme1t64 (1.11-2) ... 3095s Setting up python3.13-gdbm (3.13.0-2) ... 3095s Setting up python3-gdbm:s390x (3.12.7-1) ... 3095s Processing triggers for man-db (2.13.0-1) ... 3096s Processing triggers for libc-bin (2.40-1ubuntu3) ... 3096s Reading package lists... 3096s Building dependency tree... 3096s Reading state information... 3096s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3097s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 3097s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 3097s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 3097s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 3097s Reading package lists... 3098s Reading package lists... 3098s Building dependency tree... 3098s Reading state information... 3098s Calculating upgrade... 3098s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3098s Reading package lists... 3098s Building dependency tree... 3098s Reading state information... 3098s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3102s Reading package lists... 3102s Building dependency tree... 3102s Reading state information... 3102s Starting pkgProblemResolver with broken count: 0 3102s Starting 2 pkgProblemResolver with broken count: 0 3102s Done 3102s The following additional packages will be installed: 3102s hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 3102s libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 libopenmpi3t64 3102s libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 libslurm41t64 3102s libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich 3102s ocl-icd-libopencl1 openmpi-bin openmpi-common 3102s Suggested packages: 3102s scalapack-doc mpich-doc opencl-icd gfortran | fortran-compiler 3102s Recommended packages: 3102s libmpich-dev 3102s The following NEW packages will be installed: 3102s autopkgtest-satdep hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 3102s libgfortran5 libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 3102s libopenmpi3t64 libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 3102s libslurm41t64 libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich 3102s ocl-icd-libopencl1 openmpi-bin openmpi-common 3102s 0 upgraded, 25 newly installed, 0 to remove and 0 not upgraded. 3102s Need to get 32.3 MB/32.3 MB of archives. 3102s After this operation, 158 MB of additional disk space will be used. 3102s Get:1 /tmp/autopkgtest.LZ83Tw/3-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [764 B] 3102s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 3103s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 3103s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 52.0-2ubuntu1 [73.8 kB] 3103s Get:5 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3ubuntu1 [558 kB] 3103s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 3103s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.11.2-1 [176 kB] 3103s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 3103s Get:9 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB] 3103s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 3103s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 3103s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 3103s Get:13 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.11.2-1 [16.1 kB] 3103s Get:14 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.3-2 [718 kB] 3103s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x libopenmpi3t64 s390x 5.0.5-6 [2104 kB] 3103s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-common all 5.0.5-6 [95.6 kB] 3103s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-bin s390x 5.0.5-6 [175 kB] 3103s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.17 [2296 B] 3103s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpich12 s390x 4.2.0-14 [1762 kB] 3103s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x libscalapack-mpich2.2 s390x 2.2.1-3.1ubuntu2 [1946 kB] 3103s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x libslurm41t64 s390x 24.05.4-1 [628 kB] 3103s Get:22 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-data all 7.2.2-2build1 [6082 kB] 3103s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x hwloc-nox s390x 2.11.2-1 [221 kB] 3103s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x mpich s390x 4.2.0-14 [212 kB] 3103s Get:25 http://ftpmaster.internal/ubuntu plucky/universe s390x nwchem-mpich s390x 7.2.2-2build1 [13.6 MB] 3104s Fetched 32.3 MB in 2s (20.0 MB/s) 3104s Selecting previously unselected package libblas3:s390x. 3104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55531 files and directories currently installed.) 3104s Preparing to unpack .../00-libblas3_3.12.0-3build2_s390x.deb ... 3104s Unpacking libblas3:s390x (3.12.0-3build2) ... 3104s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 3104s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 3104s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 3104s Selecting previously unselected package librdmacm1t64:s390x. 3104s Preparing to unpack .../02-librdmacm1t64_52.0-2ubuntu1_s390x.deb ... 3104s Unpacking librdmacm1t64:s390x (52.0-2ubuntu1) ... 3104s Selecting previously unselected package libfabric1:s390x. 3104s Preparing to unpack .../03-libfabric1_1.17.0-3ubuntu1_s390x.deb ... 3104s Unpacking libfabric1:s390x (1.17.0-3ubuntu1) ... 3104s Selecting previously unselected package libgfortran5:s390x. 3104s Preparing to unpack .../04-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 3104s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 3104s Selecting previously unselected package libhwloc15:s390x. 3104s Preparing to unpack .../05-libhwloc15_2.11.2-1_s390x.deb ... 3104s Unpacking libhwloc15:s390x (2.11.2-1) ... 3104s Selecting previously unselected package liblapack3:s390x. 3104s Preparing to unpack .../06-liblapack3_3.12.0-3build2_s390x.deb ... 3104s Unpacking liblapack3:s390x (3.12.0-3build2) ... 3104s Selecting previously unselected package libmunge2:s390x. 3104s Preparing to unpack .../07-libmunge2_0.5.15-4build1_s390x.deb ... 3104s Unpacking libmunge2:s390x (0.5.15-4build1) ... 3104s Selecting previously unselected package libpciaccess0:s390x. 3104s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 3104s Unpacking libpciaccess0:s390x (0.17-3build1) ... 3104s Selecting previously unselected package libxnvctrl0:s390x. 3104s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 3104s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 3104s Selecting previously unselected package ocl-icd-libopencl1:s390x. 3104s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 3104s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 3104s Selecting previously unselected package libhwloc-plugins:s390x. 3104s Preparing to unpack .../11-libhwloc-plugins_2.11.2-1_s390x.deb ... 3104s Unpacking libhwloc-plugins:s390x (2.11.2-1) ... 3104s Selecting previously unselected package libpmix2t64:s390x. 3104s Preparing to unpack .../12-libpmix2t64_5.0.3-2_s390x.deb ... 3104s Unpacking libpmix2t64:s390x (5.0.3-2) ... 3104s Selecting previously unselected package libopenmpi3t64:s390x. 3104s Preparing to unpack .../13-libopenmpi3t64_5.0.5-6_s390x.deb ... 3104s Unpacking libopenmpi3t64:s390x (5.0.5-6) ... 3104s Selecting previously unselected package openmpi-common. 3104s Preparing to unpack .../14-openmpi-common_5.0.5-6_all.deb ... 3104s Unpacking openmpi-common (5.0.5-6) ... 3104s Selecting previously unselected package openmpi-bin. 3104s Preparing to unpack .../15-openmpi-bin_5.0.5-6_s390x.deb ... 3104s Unpacking openmpi-bin (5.0.5-6) ... 3104s Selecting previously unselected package mpi-default-bin. 3104s Preparing to unpack .../16-mpi-default-bin_1.17_s390x.deb ... 3104s Unpacking mpi-default-bin (1.17) ... 3104s Selecting previously unselected package libmpich12:s390x. 3104s Preparing to unpack .../17-libmpich12_4.2.0-14_s390x.deb ... 3104s Unpacking libmpich12:s390x (4.2.0-14) ... 3104s Selecting previously unselected package libscalapack-mpich2.2:s390x. 3104s Preparing to unpack .../18-libscalapack-mpich2.2_2.2.1-3.1ubuntu2_s390x.deb ... 3104s Unpacking libscalapack-mpich2.2:s390x (2.2.1-3.1ubuntu2) ... 3104s Selecting previously unselected package libslurm41t64. 3104s Preparing to unpack .../19-libslurm41t64_24.05.4-1_s390x.deb ... 3104s Unpacking libslurm41t64 (24.05.4-1) ... 3104s Selecting previously unselected package nwchem-data. 3104s Preparing to unpack .../20-nwchem-data_7.2.2-2build1_all.deb ... 3104s Unpacking nwchem-data (7.2.2-2build1) ... 3104s Selecting previously unselected package hwloc-nox. 3104s Preparing to unpack .../21-hwloc-nox_2.11.2-1_s390x.deb ... 3104s Unpacking hwloc-nox (2.11.2-1) ... 3104s Selecting previously unselected package mpich. 3104s Preparing to unpack .../22-mpich_4.2.0-14_s390x.deb ... 3104s Unpacking mpich (4.2.0-14) ... 3104s Selecting previously unselected package nwchem-mpich. 3105s Preparing to unpack .../23-nwchem-mpich_7.2.2-2build1_s390x.deb ... 3105s Unpacking nwchem-mpich (7.2.2-2build1) ... 3105s Selecting previously unselected package autopkgtest-satdep. 3105s Preparing to unpack .../24-3-autopkgtest-satdep.deb ... 3105s Unpacking autopkgtest-satdep (0) ... 3105s Setting up libpciaccess0:s390x (0.17-3build1) ... 3105s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 3105s Setting up nwchem-data (7.2.2-2build1) ... 3105s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 3105s Setting up libblas3:s390x (3.12.0-3build2) ... 3105s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 3105s Setting up libmunge2:s390x (0.5.15-4build1) ... 3105s Setting up libhwloc15:s390x (2.11.2-1) ... 3105s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 3105s Setting up libmpich12:s390x (4.2.0-14) ... 3105s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 3105s Setting up openmpi-common (5.0.5-6) ... 3105s Setting up librdmacm1t64:s390x (52.0-2ubuntu1) ... 3105s Setting up libslurm41t64 (24.05.4-1) ... 3105s Setting up libfabric1:s390x (1.17.0-3ubuntu1) ... 3105s Setting up liblapack3:s390x (3.12.0-3build2) ... 3105s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 3105s Setting up hwloc-nox (2.11.2-1) ... 3105s Setting up libhwloc-plugins:s390x (2.11.2-1) ... 3105s Setting up libpmix2t64:s390x (5.0.3-2) ... 3105s Setting up libopenmpi3t64:s390x (5.0.5-6) ... 3105s Setting up openmpi-bin (5.0.5-6) ... 3105s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 3105s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 3105s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 3105s Setting up mpich (4.2.0-14) ... 3105s Setting up mpi-default-bin (1.17) ... 3105s Setting up libscalapack-mpich2.2:s390x (2.2.1-3.1ubuntu2) ... 3105s Setting up nwchem-mpich (7.2.2-2build1) ... 3105s Setting up autopkgtest-satdep (0) ... 3105s Processing triggers for man-db (2.13.0-1) ... 3105s Processing triggers for libc-bin (2.40-1ubuntu3) ... 3107s (Reading database ... 57501 files and directories currently installed.) 3107s Removing autopkgtest-satdep (0) ... 4179s autopkgtest-virt-ssh [00:23:37]: copydown destination failed, status 255 4183s autopkgtest-virt-ssh [00:23:41]: ------- nova console-log 1a88c3f5-e669-4a46-b6f3-3ce4655e5da5 (adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5) ------ 4183s ERROR (CommandError): No server with a name or ID of '1a88c3f5-e669-4a46-b6f3-3ce4655e5da5' exists. 4183s --------------------------------------------------- 4183s ------- nova show 1a88c3f5-e669-4a46-b6f3-3ce4655e5da5 (adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5) ------ 4183s ERROR (CommandError): No server with a name or ID of '1a88c3f5-e669-4a46-b6f3-3ce4655e5da5' exists. 4183s --------------------------------------------------- 4183s 6807s nova [W] Using flock in prodstack6-s390x 6807s Creating nova instance adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5 from image adt/ubuntu-plucky-s390x-server-20241116.img (UUID 8b9ebbc2-c07a-4d37-971c-9f6c1dec30a1)... 6807s nova [W] Using flock in prodstack6-s390x 6807s Creating nova instance adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5 from image adt/ubuntu-plucky-s390x-server-20241116.img (UUID 8b9ebbc2-c07a-4d37-971c-9f6c1dec30a1)... 6807s nova [W] Using flock in prodstack6-s390x 6807s Creating nova instance adt-plucky-s390x-nwchem-20241116-195521-juju-7f2275-prod-proposed-migration-environment-20-34a5a784-4654-40b2-8647-16eaba4867e5 from image adt/ubuntu-plucky-s390x-server-20241116.img (UUID 8b9ebbc2-c07a-4d37-971c-9f6c1dec30a1)... 6807s ERROR (CommandError): Unable to delete the specified server(s). 6807s autopkgtest [01:07:25]: ERROR: testbed failure: sent `auxverb_debug_fail', got `copy-failed', expected `ok...'