0s autopkgtest [13:11:42]: starting date and time: 2025-03-22 13:11:42+0000 0s autopkgtest [13:11:42]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [13:11:42]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.v2kts66h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:last-align --apt-upgrade nanook --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=last-align/1609-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-2.secgroup --name adt-plucky-s390x-nanook-20250322-131142-juju-7f2275-prod-proposed-migration-environment-2-df9086aa-9344-4f1d-8370-57c40a7bb354 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 44s autopkgtest [13:12:26]: testbed dpkg architecture: s390x 44s autopkgtest [13:12:26]: testbed apt version: 2.9.33 44s autopkgtest [13:12:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s autopkgtest [13:12:27]: testbed release detected to be: None 45s autopkgtest [13:12:27]: updating testbed package index (apt update) 46s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 46s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 46s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 46s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 46s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [288 kB] 46s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [1232 B] 46s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [29.9 kB] 46s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [11.5 kB] 46s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [41.5 kB] 46s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1264 B] 46s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 46s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [182 kB] 46s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [10.7 kB] 46s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [2512 B] 46s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [316 B] 47s Fetched 695 kB in 1s (891 kB/s) 47s Reading package lists... 48s autopkgtest [13:12:30]: upgrading testbed (apt dist-upgrade and autopurge) 48s Reading package lists... 48s Building dependency tree... 48s Reading state information... 48s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 48s Starting 2 pkgProblemResolver with broken count: 0 48s Done 49s Entering ResolveByKeep 49s 49s Calculating upgrade... 49s The following packages will be upgraded: 49s apparmor apt apt-utils dpkg dpkg-dev fwupd gcc-14-base ibverbs-providers 49s libapparmor1 libapt-pkg7.0 libdpkg-perl libfwupd3 libibverbs1 libldap-common 49s libldap2 libxmlb2 ubuntu-pro-client ubuntu-pro-client-l10n 49s 18 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 49s Need to get 12.7 MB of archives. 49s After this operation, 180 kB of additional disk space will be used. 49s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libapt-pkg7.0 s390x 2.9.34 [1114 kB] 50s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x dpkg s390x 1.22.18ubuntu2 [1300 kB] 50s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x apt s390x 2.9.34 [1424 kB] 50s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x apt-utils s390x 2.9.34 [215 kB] 50s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-base s390x 14.2.0-19ubuntu1 [53.9 kB] 50s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libapparmor1 s390x 4.1.0~beta5-0ubuntu11 [55.0 kB] 50s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x ubuntu-pro-client-l10n s390x 35 [19.7 kB] 50s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x ubuntu-pro-client s390x 35 [257 kB] 50s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x apparmor s390x 4.1.0~beta5-0ubuntu11 [759 kB] 50s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libibverbs1 s390x 56.0-3ubuntu1 [70.0 kB] 50s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x ibverbs-providers s390x 56.0-3ubuntu1 [415 kB] 50s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x dpkg-dev all 1.22.18ubuntu2 [1089 kB] 50s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdpkg-perl all 1.22.18ubuntu2 [281 kB] 50s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x fwupd s390x 2.0.6-7 [5235 kB] 50s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libfwupd3 s390x 2.0.6-7 [134 kB] 50s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libxmlb2 s390x 0.3.22-1 [69.2 kB] 50s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libldap-common all 2.6.9+dfsg-2ubuntu1 [35.5 kB] 50s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libldap2 s390x 2.6.9+dfsg-2ubuntu1 [206 kB] 50s Preconfiguring packages ... 50s Fetched 12.7 MB in 1s (13.0 MB/s) 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81426 files and directories currently installed.) 50s Preparing to unpack .../libapt-pkg7.0_2.9.34_s390x.deb ... 50s Unpacking libapt-pkg7.0:s390x (2.9.34) over (2.9.33) ... 50s Setting up libapt-pkg7.0:s390x (2.9.34) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81426 files and directories currently installed.) 50s Preparing to unpack .../dpkg_1.22.18ubuntu2_s390x.deb ... 50s Unpacking dpkg (1.22.18ubuntu2) over (1.22.15ubuntu1) ... 50s Setting up dpkg (1.22.18ubuntu2) ... 51s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81425 files and directories currently installed.) 51s Preparing to unpack .../archives/apt_2.9.34_s390x.deb ... 51s Unpacking apt (2.9.34) over (2.9.33) ... 51s Setting up apt (2.9.34) ... 51s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81425 files and directories currently installed.) 51s Preparing to unpack .../00-apt-utils_2.9.34_s390x.deb ... 51s Unpacking apt-utils (2.9.34) over (2.9.33) ... 51s Preparing to unpack .../01-gcc-14-base_14.2.0-19ubuntu1_s390x.deb ... 51s Unpacking gcc-14-base:s390x (14.2.0-19ubuntu1) over (14.2.0-17ubuntu3) ... 51s Preparing to unpack .../02-libapparmor1_4.1.0~beta5-0ubuntu11_s390x.deb ... 51s Unpacking libapparmor1:s390x (4.1.0~beta5-0ubuntu11) over (4.1.0~beta5-0ubuntu9) ... 51s Preparing to unpack .../03-ubuntu-pro-client-l10n_35_s390x.deb ... 51s Unpacking ubuntu-pro-client-l10n (35) over (34.1.3) ... 51s Preparing to unpack .../04-ubuntu-pro-client_35_s390x.deb ... 51s Unpacking ubuntu-pro-client (35) over (34.1.3) ... 52s Preparing to unpack .../05-apparmor_4.1.0~beta5-0ubuntu11_s390x.deb ... 52s Unpacking apparmor (4.1.0~beta5-0ubuntu11) over (4.1.0~beta5-0ubuntu9) ... 52s Preparing to unpack .../06-libibverbs1_56.0-3ubuntu1_s390x.deb ... 52s Unpacking libibverbs1:s390x (56.0-3ubuntu1) over (55.0-1ubuntu1) ... 52s Preparing to unpack .../07-ibverbs-providers_56.0-3ubuntu1_s390x.deb ... 52s Unpacking ibverbs-providers:s390x (56.0-3ubuntu1) over (55.0-1ubuntu1) ... 52s Preparing to unpack .../08-dpkg-dev_1.22.18ubuntu2_all.deb ... 52s Unpacking dpkg-dev (1.22.18ubuntu2) over (1.22.15ubuntu1) ... 52s Preparing to unpack .../09-libdpkg-perl_1.22.18ubuntu2_all.deb ... 52s Unpacking libdpkg-perl (1.22.18ubuntu2) over (1.22.15ubuntu1) ... 52s Preparing to unpack .../10-fwupd_2.0.6-7_s390x.deb ... 52s Unpacking fwupd (2.0.6-7) over (2.0.6-5) ... 52s Preparing to unpack .../11-libfwupd3_2.0.6-7_s390x.deb ... 52s Unpacking libfwupd3:s390x (2.0.6-7) over (2.0.6-5) ... 52s Preparing to unpack .../12-libxmlb2_0.3.22-1_s390x.deb ... 52s Unpacking libxmlb2:s390x (0.3.22-1) over (0.3.21-1) ... 52s Preparing to unpack .../13-libldap-common_2.6.9+dfsg-2ubuntu1_all.deb ... 52s Unpacking libldap-common (2.6.9+dfsg-2ubuntu1) over (2.6.9+dfsg-1~exp2ubuntu1) ... 52s Preparing to unpack .../14-libldap2_2.6.9+dfsg-2ubuntu1_s390x.deb ... 52s Unpacking libldap2:s390x (2.6.9+dfsg-2ubuntu1) over (2.6.9+dfsg-1~exp2ubuntu1) ... 52s Setting up libibverbs1:s390x (56.0-3ubuntu1) ... 52s Setting up libapparmor1:s390x (4.1.0~beta5-0ubuntu11) ... 52s Setting up apt-utils (2.9.34) ... 52s Setting up ibverbs-providers:s390x (56.0-3ubuntu1) ... 52s Setting up gcc-14-base:s390x (14.2.0-19ubuntu1) ... 52s Setting up libxmlb2:s390x (0.3.22-1) ... 52s Setting up libfwupd3:s390x (2.0.6-7) ... 52s Setting up libldap-common (2.6.9+dfsg-2ubuntu1) ... 52s Setting up apparmor (4.1.0~beta5-0ubuntu11) ... 53s Reloading AppArmor profiles 55s Setting up libdpkg-perl (1.22.18ubuntu2) ... 55s Setting up ubuntu-pro-client (35) ... 55s Installing new version of config file /etc/apparmor.d/ubuntu_pro_apt_news ... 55s Installing new version of config file /etc/apt/apt.conf.d/20apt-esm-hook.conf ... 56s Setting up libldap2:s390x (2.6.9+dfsg-2ubuntu1) ... 56s Setting up fwupd (2.0.6-7) ... 56s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 56s fwupd.service is a disabled or a static unit not running, not starting it. 56s Setting up ubuntu-pro-client-l10n (35) ... 56s Setting up dpkg-dev (1.22.18ubuntu2) ... 56s Processing triggers for libc-bin (2.41-1ubuntu2) ... 56s Processing triggers for systemd (257.4-1ubuntu1) ... 56s Processing triggers for man-db (2.13.0-1) ... 57s Processing triggers for dbus (1.16.2-2ubuntu1) ... 58s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Starting pkgProblemResolver with broken count: 0 59s Starting 2 pkgProblemResolver with broken count: 0 59s Done 59s Solving dependencies... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest [13:12:41]: rebooting testbed after setup commands that affected boot 83s autopkgtest [13:13:05]: testbed running kernel: Linux 6.14.0-11-generic #11-Ubuntu SMP Mon Mar 17 11:24:17 UTC 2025 86s autopkgtest [13:13:08]: @@@@@@@@@@@@@@@@@@@@ apt-source nanook 89s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (dsc) [2220 B] 89s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (tar) [95.2 kB] 89s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (diff) [1818 kB] 89s gpgv: Signature made Wed Dec 18 14:21:48 2024 UTC 89s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 89s gpgv: issuer "emollier@debian.org" 89s gpgv: Can't check signature: No public key 89s dpkg-source: warning: cannot verify inline signature for ./nanook_1.33+dfsg-6.dsc: no acceptable signature found 89s autopkgtest [13:13:11]: testing package nanook version 1.33+dfsg-6 90s autopkgtest [13:13:12]: build not needed 90s autopkgtest [13:13:12]: test run-unit-test: preparing testbed 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Starting pkgProblemResolver with broken count: 0 90s Starting 2 pkgProblemResolver with broken count: 0 90s Done 91s The following NEW packages will be installed: 91s ca-certificates-java default-jre-headless fontconfig fontconfig-config 91s fonts-dejavu-core fonts-dejavu-mono fonts-lmodern hdf5-tools java-common 91s last-align libaec0 libapache-pom-java libblas3 libcairo2 libcommons-io-java 91s libcommons-parent-java libdatrie1 libdeflate0 libfontconfig1 libfreetype6 91s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 91s libhdf5-hl-310 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 91s liblapack3 liblcms2-2 libmpfi0 libpango-1.0-0 libpangocairo-1.0-0 91s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcsclite1 libpixman-1-0 91s libpotrace0 libptexenc1 libsharpyuv0 libsm6 libsynctex2 libsz2 libtcl8.6 91s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 91s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 91s libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler nanook nanook-examples 91s openjdk-21-jre-headless r-base-core r-cran-cli r-cran-colorspace 91s r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra 91s r-cran-gtable r-cran-isoband r-cran-labeling r-cran-lattice r-cran-lifecycle 91s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv 91s r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten 91s r-cran-plyr r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape 91s r-cran-rlang r-cran-scales r-cran-tibble r-cran-utf8 r-cran-vctrs 91s r-cran-viridislite r-cran-withr t1utils tex-common texlive-base 91s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 91s 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded. 91s Need to get 163 MB of archives. 91s After this operation, 457 MB of additional disk space will be used. 91s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x ca-certificates-java all 20240118 [11.6 kB] 91s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x java-common all 0.76 [6852 B] 91s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 91s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 91s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 91s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libpcsclite1 s390x 2.3.1-1 [24.5 kB] 91s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x openjdk-21-jre-headless s390x 21.0.7~7ea-1 [43.8 MB] 93s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x default-jre-headless s390x 2:1.21-76 [3182 B] 93s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 93s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 93s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 93s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2.1ubuntu1 [37.7 kB] 93s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2.1ubuntu1 [150 kB] 93s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2.1ubuntu1 [191 kB] 93s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 93s Get:16 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 93s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 93s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-310 s390x 1.14.5+repack-3 [1477 kB] 93s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-3 [61.0 kB] 93s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x hdf5-tools s390x 1.14.5+repack-3 [403 kB] 93s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x last-align s390x 1609-1 [1017 kB] 93s Get:22 http://ftpmaster.internal/ubuntu plucky/universe s390x libapache-pom-java all 33-2 [5874 B] 93s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 93s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 93s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 93s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 93s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 93s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.4-1 [580 kB] 93s Get:29 http://ftpmaster.internal/ubuntu plucky/universe s390x libcommons-parent-java all 56-1 [10.7 kB] 93s Get:30 http://ftpmaster.internal/ubuntu plucky/universe s390x libcommons-io-java all 2.18.0-1 [477 kB] 93s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 93s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 93s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250315-1ubuntu1 [620 kB] 93s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250315-1ubuntu1 [151 kB] 93s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 93s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 93s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 93s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 93s Get:39 http://ftpmaster.internal/ubuntu plucky/universe s390x libkpathsea6 s390x 2024.20240313.70630+ds-6 [67.0 kB] 93s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 93s Get:41 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 93s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 93s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 93s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.3-1 [254 kB] 93s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.3-1 [50.5 kB] 93s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.3-1 [28.2 kB] 93s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 93s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 93s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 93s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x libptexenc1 s390x 2024.20240313.70630+ds-6 [43.4 kB] 93s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 93s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 93s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x libsynctex2 s390x 2024.20240313.70630+ds-6 [64.8 kB] 93s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 93s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 93s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x libtexlua53-5 s390x 2024.20240313.70630+ds-6 [131 kB] 93s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 93s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 93s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 93s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 93s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 93s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 93s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 93s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 93s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 93s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 93s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 93s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB] 93s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 94s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 94s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 94s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB] 94s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 94s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 94s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB] 94s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 94s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 94s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 94s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 94s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 94s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB] 94s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 95s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB] 95s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB] 95s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 95s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB] 95s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 95s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB] 95s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB] 95s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB] 95s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 95s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 95s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 95s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.6-1ubuntu1 [625 kB] 95s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 95s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 95s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 95s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 95s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 95s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB] 95s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 95s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 96s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB] 96s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 96s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 96s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 96s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reshape all 0.8.9-1 [168 kB] 96s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.19 [29.8 kB] 96s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 96s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-6 [9170 kB] 97s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20250309-1 [22.7 MB] 98s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20250309-1 [1276 kB] 99s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x nanook all 1.33+dfsg-6 [195 kB] 99s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x nanook-examples all 1.33+dfsg-6 [1814 kB] 99s Preconfiguring packages ... 99s Fetched 163 MB in 8s (20.2 MB/s) 99s Selecting previously unselected package ca-certificates-java. 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81447 files and directories currently installed.) 99s Preparing to unpack .../000-ca-certificates-java_20240118_all.deb ... 99s Unpacking ca-certificates-java (20240118) ... 99s Selecting previously unselected package java-common. 99s Preparing to unpack .../001-java-common_0.76_all.deb ... 99s Unpacking java-common (0.76) ... 99s Selecting previously unselected package liblcms2-2:s390x. 99s Preparing to unpack .../002-liblcms2-2_2.16-2_s390x.deb ... 99s Unpacking liblcms2-2:s390x (2.16-2) ... 99s Selecting previously unselected package libjpeg-turbo8:s390x. 99s Preparing to unpack .../003-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 99s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 99s Selecting previously unselected package libjpeg8:s390x. 99s Preparing to unpack .../004-libjpeg8_8c-2ubuntu11_s390x.deb ... 99s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 99s Selecting previously unselected package libpcsclite1:s390x. 99s Preparing to unpack .../005-libpcsclite1_2.3.1-1_s390x.deb ... 99s Unpacking libpcsclite1:s390x (2.3.1-1) ... 99s Selecting previously unselected package openjdk-21-jre-headless:s390x. 99s Preparing to unpack .../006-openjdk-21-jre-headless_21.0.7~7ea-1_s390x.deb ... 99s Unpacking openjdk-21-jre-headless:s390x (21.0.7~7ea-1) ... 100s Selecting previously unselected package default-jre-headless. 100s Preparing to unpack .../007-default-jre-headless_2%3a1.21-76_s390x.deb ... 100s Unpacking default-jre-headless (2:1.21-76) ... 100s Selecting previously unselected package libfreetype6:s390x. 100s Preparing to unpack .../008-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 100s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 100s Selecting previously unselected package fonts-dejavu-mono. 100s Preparing to unpack .../009-fonts-dejavu-mono_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-mono (2.37-8) ... 100s Selecting previously unselected package fonts-dejavu-core. 100s Preparing to unpack .../010-fonts-dejavu-core_2.37-8_all.deb ... 100s Unpacking fonts-dejavu-core (2.37-8) ... 100s Selecting previously unselected package fontconfig-config. 100s Preparing to unpack .../011-fontconfig-config_2.15.0-2.1ubuntu1_s390x.deb ... 100s Unpacking fontconfig-config (2.15.0-2.1ubuntu1) ... 100s Selecting previously unselected package libfontconfig1:s390x. 100s Preparing to unpack .../012-libfontconfig1_2.15.0-2.1ubuntu1_s390x.deb ... 100s Unpacking libfontconfig1:s390x (2.15.0-2.1ubuntu1) ... 100s Selecting previously unselected package fontconfig. 100s Preparing to unpack .../013-fontconfig_2.15.0-2.1ubuntu1_s390x.deb ... 100s Unpacking fontconfig (2.15.0-2.1ubuntu1) ... 100s Selecting previously unselected package fonts-lmodern. 100s Preparing to unpack .../014-fonts-lmodern_2.005-1_all.deb ... 100s Unpacking fonts-lmodern (2.005-1) ... 100s Selecting previously unselected package libaec0:s390x. 100s Preparing to unpack .../015-libaec0_1.1.3-1_s390x.deb ... 100s Unpacking libaec0:s390x (1.1.3-1) ... 100s Selecting previously unselected package libsz2:s390x. 100s Preparing to unpack .../016-libsz2_1.1.3-1_s390x.deb ... 100s Unpacking libsz2:s390x (1.1.3-1) ... 100s Selecting previously unselected package libhdf5-310:s390x. 100s Preparing to unpack .../017-libhdf5-310_1.14.5+repack-3_s390x.deb ... 100s Unpacking libhdf5-310:s390x (1.14.5+repack-3) ... 100s Selecting previously unselected package libhdf5-hl-310:s390x. 100s Preparing to unpack .../018-libhdf5-hl-310_1.14.5+repack-3_s390x.deb ... 100s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-3) ... 100s Selecting previously unselected package hdf5-tools. 100s Preparing to unpack .../019-hdf5-tools_1.14.5+repack-3_s390x.deb ... 100s Unpacking hdf5-tools (1.14.5+repack-3) ... 100s Selecting previously unselected package last-align. 100s Preparing to unpack .../020-last-align_1609-1_s390x.deb ... 100s Unpacking last-align (1609-1) ... 100s Selecting previously unselected package libapache-pom-java. 100s Preparing to unpack .../021-libapache-pom-java_33-2_all.deb ... 100s Unpacking libapache-pom-java (33-2) ... 100s Selecting previously unselected package libblas3:s390x. 100s Preparing to unpack .../022-libblas3_3.12.1-2_s390x.deb ... 100s Unpacking libblas3:s390x (3.12.1-2) ... 100s Selecting previously unselected package libpixman-1-0:s390x. 100s Preparing to unpack .../023-libpixman-1-0_0.44.0-3_s390x.deb ... 100s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 100s Selecting previously unselected package libxcb-render0:s390x. 100s Preparing to unpack .../024-libxcb-render0_1.17.0-2_s390x.deb ... 100s Unpacking libxcb-render0:s390x (1.17.0-2) ... 100s Selecting previously unselected package libxcb-shm0:s390x. 100s Preparing to unpack .../025-libxcb-shm0_1.17.0-2_s390x.deb ... 100s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 100s Selecting previously unselected package libxrender1:s390x. 100s Preparing to unpack .../026-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 100s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 101s Selecting previously unselected package libcairo2:s390x. 101s Preparing to unpack .../027-libcairo2_1.18.4-1_s390x.deb ... 101s Unpacking libcairo2:s390x (1.18.4-1) ... 101s Selecting previously unselected package libcommons-parent-java. 101s Preparing to unpack .../028-libcommons-parent-java_56-1_all.deb ... 101s Unpacking libcommons-parent-java (56-1) ... 101s Selecting previously unselected package libcommons-io-java. 101s Preparing to unpack .../029-libcommons-io-java_2.18.0-1_all.deb ... 101s Unpacking libcommons-io-java (2.18.0-1) ... 101s Selecting previously unselected package libdatrie1:s390x. 101s Preparing to unpack .../030-libdatrie1_0.2.13-3build1_s390x.deb ... 101s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 101s Selecting previously unselected package libdeflate0:s390x. 101s Preparing to unpack .../031-libdeflate0_1.23-1_s390x.deb ... 101s Unpacking libdeflate0:s390x (1.23-1) ... 101s Selecting previously unselected package libgfortran5:s390x. 101s Preparing to unpack .../032-libgfortran5_15-20250315-1ubuntu1_s390x.deb ... 101s Unpacking libgfortran5:s390x (15-20250315-1ubuntu1) ... 101s Selecting previously unselected package libgomp1:s390x. 101s Preparing to unpack .../033-libgomp1_15-20250315-1ubuntu1_s390x.deb ... 101s Unpacking libgomp1:s390x (15-20250315-1ubuntu1) ... 101s Selecting previously unselected package libgraphite2-3:s390x. 101s Preparing to unpack .../034-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 101s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 101s Selecting previously unselected package libharfbuzz0b:s390x. 101s Preparing to unpack .../035-libharfbuzz0b_10.2.0-1_s390x.deb ... 101s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 101s Selecting previously unselected package x11-common. 101s Preparing to unpack .../036-x11-common_1%3a7.7+23ubuntu3_all.deb ... 101s Unpacking x11-common (1:7.7+23ubuntu3) ... 101s Selecting previously unselected package libice6:s390x. 101s Preparing to unpack .../037-libice6_2%3a1.1.1-1_s390x.deb ... 101s Unpacking libice6:s390x (2:1.1.1-1) ... 101s Selecting previously unselected package libkpathsea6:s390x. 101s Preparing to unpack .../038-libkpathsea6_2024.20240313.70630+ds-6_s390x.deb ... 101s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-6) ... 101s Selecting previously unselected package liblapack3:s390x. 101s Preparing to unpack .../039-liblapack3_3.12.1-2_s390x.deb ... 101s Unpacking liblapack3:s390x (3.12.1-2) ... 101s Selecting previously unselected package libmpfi0:s390x. 101s Preparing to unpack .../040-libmpfi0_1.5.4+ds-4_s390x.deb ... 101s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 101s Selecting previously unselected package libthai-data. 101s Preparing to unpack .../041-libthai-data_0.1.29-2build1_all.deb ... 101s Unpacking libthai-data (0.1.29-2build1) ... 101s Selecting previously unselected package libthai0:s390x. 101s Preparing to unpack .../042-libthai0_0.1.29-2build1_s390x.deb ... 101s Unpacking libthai0:s390x (0.1.29-2build1) ... 101s Selecting previously unselected package libpango-1.0-0:s390x. 101s Preparing to unpack .../043-libpango-1.0-0_1.56.3-1_s390x.deb ... 101s Unpacking libpango-1.0-0:s390x (1.56.3-1) ... 101s Selecting previously unselected package libpangoft2-1.0-0:s390x. 101s Preparing to unpack .../044-libpangoft2-1.0-0_1.56.3-1_s390x.deb ... 101s Unpacking libpangoft2-1.0-0:s390x (1.56.3-1) ... 101s Selecting previously unselected package libpangocairo-1.0-0:s390x. 101s Preparing to unpack .../045-libpangocairo-1.0-0_1.56.3-1_s390x.deb ... 101s Unpacking libpangocairo-1.0-0:s390x (1.56.3-1) ... 101s Selecting previously unselected package libpaper2:s390x. 101s Preparing to unpack .../046-libpaper2_2.2.5-0.3_s390x.deb ... 101s Unpacking libpaper2:s390x (2.2.5-0.3) ... 101s Selecting previously unselected package libpaper-utils. 101s Preparing to unpack .../047-libpaper-utils_2.2.5-0.3_s390x.deb ... 101s Unpacking libpaper-utils (2.2.5-0.3) ... 101s Selecting previously unselected package libpotrace0:s390x. 101s Preparing to unpack .../048-libpotrace0_1.16-2build1_s390x.deb ... 101s Unpacking libpotrace0:s390x (1.16-2build1) ... 101s Selecting previously unselected package libptexenc1:s390x. 101s Preparing to unpack .../049-libptexenc1_2024.20240313.70630+ds-6_s390x.deb ... 101s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-6) ... 101s Selecting previously unselected package libsharpyuv0:s390x. 101s Preparing to unpack .../050-libsharpyuv0_1.5.0-0.1_s390x.deb ... 101s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 101s Selecting previously unselected package libsm6:s390x. 101s Preparing to unpack .../051-libsm6_2%3a1.2.4-1_s390x.deb ... 101s Unpacking libsm6:s390x (2:1.2.4-1) ... 101s Selecting previously unselected package libsynctex2:s390x. 101s Preparing to unpack .../052-libsynctex2_2024.20240313.70630+ds-6_s390x.deb ... 101s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-6) ... 101s Selecting previously unselected package libtcl8.6:s390x. 101s Preparing to unpack .../053-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 101s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 101s Selecting previously unselected package libteckit0:s390x. 101s Preparing to unpack .../054-libteckit0_2.5.12+ds1-1_s390x.deb ... 101s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 101s Selecting previously unselected package libtexlua53-5:s390x. 101s Preparing to unpack .../055-libtexlua53-5_2024.20240313.70630+ds-6_s390x.deb ... 101s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 101s Selecting previously unselected package libjbig0:s390x. 101s Preparing to unpack .../056-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 101s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 101s Selecting previously unselected package libwebp7:s390x. 101s Preparing to unpack .../057-libwebp7_1.5.0-0.1_s390x.deb ... 101s Unpacking libwebp7:s390x (1.5.0-0.1) ... 101s Selecting previously unselected package libtiff6:s390x. 101s Preparing to unpack .../058-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 101s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 101s Selecting previously unselected package libxft2:s390x. 101s Preparing to unpack .../059-libxft2_2.3.6-1build1_s390x.deb ... 101s Unpacking libxft2:s390x (2.3.6-1build1) ... 101s Selecting previously unselected package libxss1:s390x. 101s Preparing to unpack .../060-libxss1_1%3a1.2.3-1build3_s390x.deb ... 101s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 101s Selecting previously unselected package libtk8.6:s390x. 101s Preparing to unpack .../061-libtk8.6_8.6.16-1_s390x.deb ... 101s Unpacking libtk8.6:s390x (8.6.16-1) ... 101s Selecting previously unselected package libxt6t64:s390x. 101s Preparing to unpack .../062-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 101s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 101s Selecting previously unselected package libxmu6:s390x. 101s Preparing to unpack .../063-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 101s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 101s Selecting previously unselected package libxpm4:s390x. 101s Preparing to unpack .../064-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 101s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 101s Selecting previously unselected package libxaw7:s390x. 101s Preparing to unpack .../065-libxaw7_2%3a1.0.16-1_s390x.deb ... 101s Unpacking libxaw7:s390x (2:1.0.16-1) ... 101s Selecting previously unselected package libxi6:s390x. 101s Preparing to unpack .../066-libxi6_2%3a1.8.2-1_s390x.deb ... 101s Unpacking libxi6:s390x (2:1.8.2-1) ... 101s Selecting previously unselected package libzzip-0-13t64:s390x. 101s Preparing to unpack .../067-libzzip-0-13t64_0.13.78+dfsg.1-0.1_s390x.deb ... 101s Unpacking libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 101s Selecting previously unselected package zip. 101s Preparing to unpack .../068-zip_3.0-14ubuntu2_s390x.deb ... 101s Unpacking zip (3.0-14ubuntu2) ... 101s Selecting previously unselected package unzip. 101s Preparing to unpack .../069-unzip_6.0-28ubuntu6_s390x.deb ... 101s Unpacking unzip (6.0-28ubuntu6) ... 101s Selecting previously unselected package xdg-utils. 101s Preparing to unpack .../070-xdg-utils_1.2.1-2ubuntu1_all.deb ... 101s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 101s Selecting previously unselected package r-base-core. 101s Preparing to unpack .../071-r-base-core_4.4.3-1_s390x.deb ... 101s Unpacking r-base-core (4.4.3-1) ... 101s Selecting previously unselected package r-cran-littler. 101s Preparing to unpack .../072-r-cran-littler_0.3.20-2_s390x.deb ... 101s Unpacking r-cran-littler (0.3.20-2) ... 101s Selecting previously unselected package littler. 101s Preparing to unpack .../073-littler_0.3.20-2_all.deb ... 101s Unpacking littler (0.3.20-2) ... 101s Selecting previously unselected package r-cran-cli. 101s Preparing to unpack .../074-r-cran-cli_3.6.4-1_s390x.deb ... 101s Unpacking r-cran-cli (3.6.4-1) ... 101s Selecting previously unselected package r-cran-glue. 101s Preparing to unpack .../075-r-cran-glue_1.8.0-1_s390x.deb ... 101s Unpacking r-cran-glue (1.8.0-1) ... 101s Selecting previously unselected package r-cran-rlang. 101s Preparing to unpack .../076-r-cran-rlang_1.1.5-1_s390x.deb ... 101s Unpacking r-cran-rlang (1.1.5-1) ... 101s Selecting previously unselected package r-cran-lifecycle. 101s Preparing to unpack .../077-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 101s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 101s Selecting previously unselected package r-cran-gtable. 101s Preparing to unpack .../078-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 101s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 101s Selecting previously unselected package r-cran-isoband. 101s Preparing to unpack .../079-r-cran-isoband_0.2.7-1_s390x.deb ... 101s Unpacking r-cran-isoband (0.2.7-1) ... 102s Selecting previously unselected package r-cran-mass. 102s Preparing to unpack .../080-r-cran-mass_7.3-64-1_s390x.deb ... 102s Unpacking r-cran-mass (7.3-64-1) ... 102s Selecting previously unselected package r-cran-lattice. 102s Preparing to unpack .../081-r-cran-lattice_0.22-6-1_s390x.deb ... 102s Unpacking r-cran-lattice (0.22-6-1) ... 102s Selecting previously unselected package r-cran-nlme. 102s Preparing to unpack .../082-r-cran-nlme_3.1.167-1_s390x.deb ... 102s Unpacking r-cran-nlme (3.1.167-1) ... 102s Selecting previously unselected package r-cran-matrix. 102s Preparing to unpack .../083-r-cran-matrix_1.7-3-1_s390x.deb ... 102s Unpacking r-cran-matrix (1.7-3-1) ... 102s Selecting previously unselected package r-cran-mgcv. 102s Preparing to unpack .../084-r-cran-mgcv_1.9-1-1_s390x.deb ... 102s Unpacking r-cran-mgcv (1.9-1-1) ... 102s Selecting previously unselected package r-cran-farver. 102s Preparing to unpack .../085-r-cran-farver_2.1.2-1_s390x.deb ... 102s Unpacking r-cran-farver (2.1.2-1) ... 102s Selecting previously unselected package r-cran-labeling. 102s Preparing to unpack .../086-r-cran-labeling_0.4.3-1_all.deb ... 102s Unpacking r-cran-labeling (0.4.3-1) ... 102s Selecting previously unselected package r-cran-colorspace. 102s Preparing to unpack .../087-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ... 102s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 102s Selecting previously unselected package r-cran-munsell. 102s Preparing to unpack .../088-r-cran-munsell_0.5.1-1_all.deb ... 102s Unpacking r-cran-munsell (0.5.1-1) ... 102s Selecting previously unselected package r-cran-r6. 102s Preparing to unpack .../089-r-cran-r6_2.6.1-1_all.deb ... 102s Unpacking r-cran-r6 (2.6.1-1) ... 102s Selecting previously unselected package r-cran-rcolorbrewer. 102s Preparing to unpack .../090-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 102s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 102s Selecting previously unselected package r-cran-viridislite. 102s Preparing to unpack .../091-r-cran-viridislite_0.4.2-2_all.deb ... 102s Unpacking r-cran-viridislite (0.4.2-2) ... 102s Selecting previously unselected package r-cran-scales. 102s Preparing to unpack .../092-r-cran-scales_1.3.0-1_all.deb ... 102s Unpacking r-cran-scales (1.3.0-1) ... 102s Selecting previously unselected package r-cran-fansi. 102s Preparing to unpack .../093-r-cran-fansi_1.0.6-1ubuntu1_s390x.deb ... 102s Unpacking r-cran-fansi (1.0.6-1ubuntu1) ... 102s Selecting previously unselected package r-cran-magrittr. 102s Preparing to unpack .../094-r-cran-magrittr_2.0.3-1_s390x.deb ... 102s Unpacking r-cran-magrittr (2.0.3-1) ... 102s Selecting previously unselected package r-cran-utf8. 102s Preparing to unpack .../095-r-cran-utf8_1.2.4-1_s390x.deb ... 102s Unpacking r-cran-utf8 (1.2.4-1) ... 102s Selecting previously unselected package r-cran-vctrs. 102s Preparing to unpack .../096-r-cran-vctrs_0.6.5-1_s390x.deb ... 102s Unpacking r-cran-vctrs (0.6.5-1) ... 102s Selecting previously unselected package r-cran-pillar. 102s Preparing to unpack .../097-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 102s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 102s Selecting previously unselected package r-cran-pkgconfig. 102s Preparing to unpack .../098-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 102s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 102s Selecting previously unselected package r-cran-tibble. 102s Preparing to unpack .../099-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ... 102s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 102s Selecting previously unselected package r-cran-withr. 102s Preparing to unpack .../100-r-cran-withr_3.0.2+dfsg-1_all.deb ... 102s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 102s Selecting previously unselected package r-cran-ggplot2. 102s Preparing to unpack .../101-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 102s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 102s Selecting previously unselected package r-cran-gridextra. 102s Preparing to unpack .../102-r-cran-gridextra_2.3-3build1_all.deb ... 102s Unpacking r-cran-gridextra (2.3-3build1) ... 102s Selecting previously unselected package r-cran-pkgkitten. 102s Preparing to unpack .../103-r-cran-pkgkitten_0.2.4-1_all.deb ... 102s Unpacking r-cran-pkgkitten (0.2.4-1) ... 102s Selecting previously unselected package r-cran-rcpp. 102s Preparing to unpack .../104-r-cran-rcpp_1.0.14-1_s390x.deb ... 102s Unpacking r-cran-rcpp (1.0.14-1) ... 102s Selecting previously unselected package r-cran-plyr. 102s Preparing to unpack .../105-r-cran-plyr_1.8.9-1_s390x.deb ... 102s Unpacking r-cran-plyr (1.8.9-1) ... 102s Selecting previously unselected package r-cran-reshape. 102s Preparing to unpack .../106-r-cran-reshape_0.8.9-1_all.deb ... 102s Unpacking r-cran-reshape (0.8.9-1) ... 102s Selecting previously unselected package tex-common. 102s Preparing to unpack .../107-tex-common_6.19_all.deb ... 102s Unpacking tex-common (6.19) ... 102s Selecting previously unselected package t1utils. 102s Preparing to unpack .../108-t1utils_1.41-4build3_s390x.deb ... 102s Unpacking t1utils (1.41-4build3) ... 102s Selecting previously unselected package texlive-binaries. 102s Preparing to unpack .../109-texlive-binaries_2024.20240313.70630+ds-6_s390x.deb ... 102s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 102s Selecting previously unselected package texlive-base. 102s Preparing to unpack .../110-texlive-base_2024.20250309-1_all.deb ... 102s Unpacking texlive-base (2024.20250309-1) ... 104s Selecting previously unselected package texlive-latex-base. 104s Preparing to unpack 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(1.17.0-2) ... 104s Setting up unzip (6.0-28ubuntu6) ... 104s Setting up x11-common (1:7.7+23ubuntu3) ... 104s Setting up libdeflate0:s390x (1.23-1) ... 104s Setting up libxcb-shm0:s390x (1.17.0-2) ... 104s Setting up libgomp1:s390x (15-20250315-1ubuntu1) ... 104s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 104s Setting up libaec0:s390x (1.1.3-1) ... 104s Setting up last-align (1609-1) ... 104s Setting up tex-common (6.19) ... 104s update-language: texlive-base not installed and configured, doing nothing! 104s Setting up zip (3.0-14ubuntu2) ... 104s Setting up libblas3:s390x (3.12.1-2) ... 104s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 104s Setting up libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 104s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 104s Setting up libteckit0:s390x (2.5.12+ds1-1) ... 104s Setting up libapache-pom-java (33-2) ... 104s Setting up t1utils (1.41-4build3) ... 104s Setting up libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 104s Setting up fonts-dejavu-mono (2.37-8) ... 104s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ... 104s Setting up libmpfi0:s390x (1.5.4+ds-4) ... 104s Setting up fonts-dejavu-core (2.37-8) ... 104s Setting up libpcsclite1:s390x (2.3.1-1) ... 104s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 104s Setting up libkpathsea6:s390x (2024.20240313.70630+ds-6) ... 104s Setting up libgfortran5:s390x (15-20250315-1ubuntu1) ... 104s Setting up libwebp7:s390x (1.5.0-0.1) ... 104s Setting up fonts-lmodern (2.005-1) ... 104s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 104s Setting up libthai-data (0.1.29-2build1) ... 104s Setting up libxss1:s390x (1:1.2.3-1build3) ... 104s Setting up libpaper2:s390x (2.2.5-0.3) ... 104s Setting up ca-certificates-java (20240118) ... 104s No JRE found. Skipping Java certificates setup. 104s Setting up xdg-utils (1.2.1-2ubuntu1) ... 104s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 104s Setting up libsz2:s390x (1.1.3-1) ... 104s Setting up libsynctex2:s390x (2024.20240313.70630+ds-6) ... 104s Setting up libpotrace0:s390x (1.16-2build1) ... 104s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 104s Setting up libice6:s390x (2:1.1.1-1) ... 104s Setting up liblapack3:s390x (3.12.1-2) ... 104s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 104s Setting up openjdk-21-jre-headless:s390x (21.0.7~7ea-1) ... 104s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/java to provide /usr/bin/java (java) in auto mode 104s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 104s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 104s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 104s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 104s Setting up fontconfig-config (2.15.0-2.1ubuntu1) ... 104s Setting up libcommons-parent-java (56-1) ... 104s Setting up libpaper-utils (2.2.5-0.3) ... 104s Setting up libthai0:s390x (0.1.29-2build1) ... 104s Setting up libptexenc1:s390x (2024.20240313.70630+ds-6) ... 104s Setting up libhdf5-310:s390x (1.14.5+repack-3) ... 104s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 104s Setting up libfontconfig1:s390x (2.15.0-2.1ubuntu1) ... 104s Setting up libsm6:s390x (2:1.2.4-1) ... 104s Setting up libhdf5-hl-310:s390x (1.14.5+repack-3) ... 104s Setting up fontconfig (2.15.0-2.1ubuntu1) ... 106s Regenerating fonts cache... done. 106s Setting up libxft2:s390x (2.3.6-1build1) ... 106s Setting up libcommons-io-java (2.18.0-1) ... 106s Setting up libtk8.6:s390x (8.6.16-1) ... 106s Setting up libpango-1.0-0:s390x (1.56.3-1) ... 106s Setting up libcairo2:s390x (1.18.4-1) ... 106s Setting up hdf5-tools (1.14.5+repack-3) ... 106s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 106s Setting up libpangoft2-1.0-0:s390x (1.56.3-1) ... 106s Setting up libpangocairo-1.0-0:s390x (1.56.3-1) ... 106s Setting up libxmu6:s390x (2:1.1.3-3build2) ... 106s Setting up libxaw7:s390x (2:1.0.16-1) ... 106s Setting up r-base-core (4.4.3-1) ... 106s Creating config file /etc/R/Renviron with new version 107s Setting up r-cran-labeling (0.4.3-1) ... 107s Setting up r-cran-lattice (0.22-6-1) ... 107s Setting up r-cran-nlme (3.1.167-1) ... 107s Setting up r-cran-farver (2.1.2-1) ... 107s Setting up r-cran-viridislite (0.4.2-2) ... 107s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 107s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 107s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 107s Setting up r-cran-r6 (2.6.1-1) ... 107s Setting up r-cran-pkgkitten (0.2.4-1) ... 107s Setting up texlive-base (2024.20250309-1) ... 107s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 107s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 107s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 107s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 108s Setting up r-cran-magrittr (2.0.3-1) ... 108s Setting up r-cran-littler (0.3.20-2) ... 108s Setting up r-cran-rcpp (1.0.14-1) ... 108s Setting up r-cran-rlang (1.1.5-1) ... 108s Setting up littler (0.3.20-2) ... 108s Setting up r-cran-withr (3.0.2+dfsg-1) ... 108s Setting up r-cran-fansi (1.0.6-1ubuntu1) ... 108s Setting up r-cran-mass (7.3-64-1) ... 108s Setting up r-cran-glue (1.8.0-1) ... 108s Setting up r-cran-cli (3.6.4-1) ... 108s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 108s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 108s Setting up r-cran-utf8 (1.2.4-1) ... 108s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 108s Setting up texlive-latex-base (2024.20250309-1) ... 108s Setting up r-cran-plyr (1.8.9-1) ... 108s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 108s Setting up r-cran-isoband (0.2.7-1) ... 108s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 108s Setting up r-cran-matrix (1.7-3-1) ... 108s Setting up r-cran-mgcv (1.9-1-1) ... 108s Setting up r-cran-vctrs (0.6.5-1) ... 108s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 108s Setting up r-cran-reshape (0.8.9-1) ... 108s Setting up r-cran-munsell (0.5.1-1) ... 108s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 108s Setting up r-cran-gridextra (2.3-3build1) ... 108s Setting up r-cran-scales (1.3.0-1) ... 108s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 108s Processing triggers for libc-bin (2.41-1ubuntu2) ... 108s Processing triggers for man-db (2.13.0-1) ... 108s Processing triggers for install-info (7.1.1-1) ... 108s Processing triggers for ca-certificates-java (20240118) ... 109s Adding debian:ACCVRAIZ1.pem 109s Adding debian:AC_RAIZ_FNMT-RCM.pem 109s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 109s Adding debian:ANF_Secure_Server_Root_CA.pem 109s Adding debian:Actalis_Authentication_Root_CA.pem 109s Adding debian:AffirmTrust_Commercial.pem 109s Adding debian:AffirmTrust_Networking.pem 109s Adding debian:AffirmTrust_Premium.pem 109s Adding debian:AffirmTrust_Premium_ECC.pem 109s Adding debian:Amazon_Root_CA_1.pem 109s Adding debian:Amazon_Root_CA_2.pem 109s Adding debian:Amazon_Root_CA_3.pem 109s Adding debian:Amazon_Root_CA_4.pem 109s Adding debian:Atos_TrustedRoot_2011.pem 109s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 109s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 109s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 109s Adding debian:BJCA_Global_Root_CA1.pem 109s Adding debian:BJCA_Global_Root_CA2.pem 109s Adding debian:Baltimore_CyberTrust_Root.pem 109s Adding debian:Buypass_Class_2_Root_CA.pem 109s Adding debian:Buypass_Class_3_Root_CA.pem 109s Adding debian:CA_Disig_Root_R2.pem 109s Adding debian:CFCA_EV_ROOT.pem 109s Adding debian:COMODO_Certification_Authority.pem 109s Adding debian:COMODO_ECC_Certification_Authority.pem 109s Adding debian:COMODO_RSA_Certification_Authority.pem 109s Adding debian:Certainly_Root_E1.pem 109s Adding debian:Certainly_Root_R1.pem 109s Adding debian:Certigna.pem 109s Adding debian:Certigna_Root_CA.pem 109s Adding debian:Certum_EC-384_CA.pem 109s Adding debian:Certum_Trusted_Network_CA.pem 109s Adding debian:Certum_Trusted_Network_CA_2.pem 109s Adding debian:Certum_Trusted_Root_CA.pem 109s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 109s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 109s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 109s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 109s Adding debian:Comodo_AAA_Services_root.pem 109s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 109s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 109s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 109s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 109s Adding debian:DigiCert_Assured_ID_Root_CA.pem 109s Adding debian:DigiCert_Assured_ID_Root_G2.pem 109s Adding debian:DigiCert_Assured_ID_Root_G3.pem 109s Adding debian:DigiCert_Global_Root_CA.pem 109s Adding debian:DigiCert_Global_Root_G2.pem 109s Adding debian:DigiCert_Global_Root_G3.pem 109s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 109s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 109s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 109s Adding debian:DigiCert_Trusted_Root_G4.pem 109s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 109s Adding debian:Entrust_Root_Certification_Authority.pem 109s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 109s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 109s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 109s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem 109s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 109s Adding debian:GLOBALTRUST_2020.pem 109s Adding debian:GTS_Root_R1.pem 109s Adding debian:GTS_Root_R2.pem 109s Adding debian:GTS_Root_R3.pem 109s Adding debian:GTS_Root_R4.pem 109s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 109s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 109s Adding debian:GlobalSign_Root_CA.pem 109s Adding debian:GlobalSign_Root_CA_-_R3.pem 109s Adding debian:GlobalSign_Root_CA_-_R6.pem 109s Adding debian:GlobalSign_Root_E46.pem 109s Adding debian:GlobalSign_Root_R46.pem 109s Adding debian:Go_Daddy_Class_2_CA.pem 109s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 109s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 109s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 109s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 109s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 109s Adding debian:HiPKI_Root_CA_-_G1.pem 109s Adding debian:Hongkong_Post_Root_CA_3.pem 109s Adding debian:ISRG_Root_X1.pem 109s Adding debian:ISRG_Root_X2.pem 109s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 109s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 109s Adding debian:Izenpe.com.pem 109s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 109s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 109s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 109s Adding debian:NAVER_Global_Root_Certification_Authority.pem 109s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 109s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 109s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 109s Adding debian:QuoVadis_Root_CA_1_G3.pem 109s Adding debian:QuoVadis_Root_CA_2.pem 109s Adding debian:QuoVadis_Root_CA_2_G3.pem 109s Adding debian:QuoVadis_Root_CA_3.pem 109s Adding debian:QuoVadis_Root_CA_3_G3.pem 109s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 109s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 109s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 109s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 109s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 109s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 109s Adding debian:SZAFIR_ROOT_CA2.pem 109s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 109s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 109s Adding debian:SecureSign_RootCA11.pem 109s Adding debian:SecureSign_Root_CA12.pem 109s Adding debian:SecureSign_Root_CA14.pem 109s Adding debian:SecureSign_Root_CA15.pem 109s Adding debian:SecureTrust_CA.pem 109s Adding debian:Secure_Global_CA.pem 109s Adding debian:Security_Communication_ECC_RootCA1.pem 109s Adding debian:Security_Communication_RootCA2.pem 109s Adding debian:Security_Communication_RootCA3.pem 109s Adding debian:Starfield_Class_2_CA.pem 109s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 109s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 109s Adding debian:SwissSign_Gold_CA_-_G2.pem 109s Adding debian:SwissSign_Silver_CA_-_G2.pem 109s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 109s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 109s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 109s Adding debian:TWCA_CYBER_Root_CA.pem 109s Adding debian:TWCA_Global_Root_CA.pem 109s Adding debian:TWCA_Root_Certification_Authority.pem 109s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem 109s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem 109s Adding debian:TeliaSonera_Root_CA_v1.pem 109s Adding debian:Telia_Root_CA_v2.pem 109s Adding debian:TrustAsia_Global_Root_CA_G3.pem 109s Adding debian:TrustAsia_Global_Root_CA_G4.pem 109s Adding debian:Trustwave_Global_Certification_Authority.pem 109s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 109s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 109s Adding debian:TunTrust_Root_CA.pem 109s Adding debian:UCA_Extended_Validation_Root.pem 109s Adding debian:UCA_Global_G2_Root.pem 109s Adding debian:USERTrust_ECC_Certification_Authority.pem 109s Adding debian:USERTrust_RSA_Certification_Authority.pem 109s Adding debian:XRamp_Global_CA_Root.pem 109s Adding debian:certSIGN_ROOT_CA.pem 109s Adding debian:certSIGN_Root_CA_G2.pem 109s Adding debian:e-Szigno_Root_CA_2017.pem 109s Adding debian:ePKI_Root_Certification_Authority.pem 109s Adding debian:emSign_ECC_Root_CA_-_C3.pem 109s Adding debian:emSign_ECC_Root_CA_-_G3.pem 109s Adding debian:emSign_Root_CA_-_C1.pem 109s Adding debian:emSign_Root_CA_-_G1.pem 109s Adding debian:vTrus_ECC_Root_CA.pem 109s Adding debian:vTrus_Root_CA.pem 109s done. 109s Setting up default-jre-headless (2:1.21-76) ... 109s Setting up nanook (1.33+dfsg-6) ... 109s Processing triggers for tex-common (6.19) ... 109s Running updmap-sys. This may take some time... done. 109s Running mktexlsr /var/lib/texmf ... done. 109s Building format(s) --all. 148s This may take some time... done. 149s autopkgtest [13:14:11]: test run-unit-test: [----------------------- 158s 158s NanoOK v1.33 158s 158s Comments/bugs to: richard.leggett@earlham.ac.uk 158s Follow NanoOK on twitter: @NanoOK_Software 158s 158s Scripts dir: /usr/share/nanook/bin 158s 158s Checking dependencies 158s *** ERROR: Couldn't find Rscript - is R installed? *** 158s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 158s h5dump: Version 1.14.5 158s 158s Making directory /tmp/autopkgtest.piDeSt/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/fasta 158s Checking FAST5 directory structure... 158s Using pass/fail dirs: yes 158s Using batch dirs: no 158s Using barcodes: no 158s 161s Processing [ ] 0/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 161s 161s DONE 161s 161s NanoOK v1.33 161s 161s Comments/bugs to: richard.leggett@earlham.ac.uk 161s Follow NanoOK on twitter: @NanoOK_Software 161s 161s Scripts dir: /usr/share/nanook/bin 161s 161s Checking dependencies 161s *** ERROR: Couldn't find Rscript - is R installed? *** 161s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 161s h5dump: Version 1.14.5 161s 161s Making directory /tmp/autopkgtest.piDeSt/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/last 161s Making directory /tmp/autopkgtest.piDeSt/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/last 161s Checking FASTA/Q directory structure... 161s Using pass/fail dirs: yes 161s Using batch dirs: no 161s Using barcodes: no 161s 164s Processing [ ] 0/3 Processing [================ ] 1/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 164s 164s DONE 164s 164s NanoOK v1.33 164s 164s Comments/bugs to: richard.leggett@earlham.ac.uk 164s Follow NanoOK on twitter: @NanoOK_Software 164s 164s Scripts dir: /usr/share/nanook/bin 164s 164s Checking dependencies 164s *** ERROR: Couldn't find Rscript - is R installed? *** 164s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 164s h5dump: Version 1.14.5 164s 164s Checking FASTA/Q directory structure... 164s Using pass/fail dirs: yes 164s Using batch dirs: no 164s Using barcodes: no 164s 164s Using .sizes file ecoli_dh10b_cs.fasta.sizes 164s Note: if you have changed the reference file, you need to delete the .sizes file and re-run. 164s 164s Reading reference sizes and making directories 164s Escherichia_coli 4686137 164s Control_sequence 3560 164s 164s Calculating reference GC 164s Escherichia_coli 164s Control_sequence 164s 164s Parsing Template 164s [==================================================] 1/1 164s 164s Error: unable to find any Template alignments to process. 164s Common reasons for this: 164s 1. Failure to index the reference with the alignment tool, resulting in alignment files of 0 bytes 164s 2. Wrong reference specified to the align stage, resulting in no alignments 164s 3. When indexing with LAST, the output prefix needs to be the same as the reference FASTA file, minus the .fasta extension 164s e.g. lastdb -Q 0 referencename referencename.fasta 164s 165s autopkgtest [13:14:27]: test run-unit-test: -----------------------] 165s run-unit-test FAIL non-zero exit status 1 165s autopkgtest [13:14:27]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 166s autopkgtest [13:14:28]: @@@@@@@@@@@@@@@@@@@@ summary 166s run-unit-test FAIL non-zero exit status 1 184s nova [W] Using flock in prodstack6-s390x 184s Creating nova instance adt-plucky-s390x-nanook-20250322-131142-juju-7f2275-prod-proposed-migration-environment-2-df9086aa-9344-4f1d-8370-57c40a7bb354 from image adt/ubuntu-plucky-s390x-server-20250321.img (UUID 6ae96d8b-e719-4c1b-8809-3b6533761d24)... 184s nova [W] Timed out waiting for 1b178bba-5567-4bd6-ba22-d1e32cddf8fb to get deleted.