0s autopkgtest [13:58:11]: starting date and time: 2025-01-17 13:58:11+0000 0s autopkgtest [13:58:11]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [13:58:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ftfa0it6/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:last-align --apt-upgrade nanook --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=last-align/1608-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-14.secgroup --name adt-plucky-s390x-nanook-20250117-135811-juju-7f2275-prod-proposed-migration-environment-2-542ae393-3aa3-40d5-af35-bcbf38087e7c --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 122s autopkgtest [14:00:13]: testbed dpkg architecture: s390x 123s autopkgtest [14:00:14]: testbed apt version: 2.9.18 123s autopkgtest [14:00:14]: @@@@@@@@@@@@@@@@@@@@ test bed setup 123s autopkgtest [14:00:14]: testbed release detected to be: None 124s autopkgtest [14:00:15]: updating testbed package index (apt update) 124s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 125s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 125s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 125s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 125s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 125s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [877 kB] 125s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [177 kB] 125s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.7 kB] 125s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [289 kB] 125s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [756 B] 125s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [974 kB] 125s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [5408 B] 125s Fetched 2423 kB in 1s (2508 kB/s) 126s Reading package lists... 127s + lsb_release --codename --short 127s + RELEASE=plucky 127s + cat 127s + [ plucky != trusty ] 127s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 127s Calculating upgrade... 127s The following packages will be upgraded: 127s usb.ids 127s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s Need to get 223 kB of archives. 127s After this operation, 0 B of additional disk space will be used. 127s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x usb.ids all 2025.01.14-1 [223 kB] 128s Fetched 223 kB in 0s (535 kB/s) 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55658 files and directories currently installed.) 128s Preparing to unpack .../usb.ids_2025.01.14-1_all.deb ... 128s Unpacking usb.ids (2025.01.14-1) over (2024.12.04-1) ... 128s Setting up usb.ids (2025.01.14-1) ... 128s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 128s + /usr/lib/apt/apt-helper analyze-pattern ?true 128s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove ?obsolete 128s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 128s + grep -q trusty /etc/lsb-release 128s + [ ! -d /usr/share/doc/unattended-upgrades ] 128s + [ ! -d /usr/share/doc/lxd ] 128s + [ ! -d /usr/share/doc/lxd-client ] 128s + [ ! -d /usr/share/doc/snapd ] 128s + type iptables 128s + cat 128s + chmod 755 /etc/rc.local 128s + . /etc/rc.local 128s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 128s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 128s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 128s + uname -m 128s + [ s390x = ppc64le ] 128s + [ -d /run/systemd/system ] 128s + systemd-detect-virt --quiet --vm 128s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 128s + cat 128s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 128s + echo COMPRESS=lz4 128s + sync 128s autopkgtest [14:00:19]: upgrading testbed (apt dist-upgrade and autopurge) 128s Reading package lists... 129s Building dependency tree... 129s Reading state information... 129s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 129s Starting 2 pkgProblemResolver with broken count: 0 129s Done 129s Entering ResolveByKeep 129s 129s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 130s Starting pkgProblemResolver with broken count: 0 130s Starting 2 pkgProblemResolver with broken count: 0 130s Done 130s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 132s autopkgtest [14:00:23]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 132s autopkgtest [14:00:23]: @@@@@@@@@@@@@@@@@@@@ apt-source nanook 135s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (dsc) [2220 B] 135s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (tar) [95.2 kB] 135s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (diff) [1818 kB] 135s gpgv: Signature made Wed Dec 18 14:21:48 2024 UTC 135s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 135s gpgv: issuer "emollier@debian.org" 135s gpgv: Can't check signature: No public key 135s dpkg-source: warning: cannot verify inline signature for ./nanook_1.33+dfsg-6.dsc: no acceptable signature found 135s autopkgtest [14:00:26]: testing package nanook version 1.33+dfsg-6 135s autopkgtest [14:00:26]: build not needed 136s autopkgtest [14:00:27]: test run-unit-test: preparing testbed 136s Reading package lists... 136s Building dependency tree... 136s Reading state information... 136s Starting pkgProblemResolver with broken count: 0 136s Starting 2 pkgProblemResolver with broken count: 0 136s Done 136s The following NEW packages will be installed: 136s ca-certificates-java default-jre-headless fontconfig fontconfig-config 136s fonts-dejavu-core fonts-dejavu-mono fonts-lmodern hdf5-tools java-common 136s last-align libaec0 libapache-pom-java libblas3 libcairo2 libcommons-io-java 136s libcommons-parent-java libdatrie1 libdeflate0 libfontconfig1 libfreetype6 136s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libice6 136s libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 liblapack3 liblcms2-2 libmpfi0 136s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 136s libpaper2 libpcsclite1 libpixman-1-0 libpotrace0 libptexenc1 libsharpyuv0 136s libsm6 libsynctex2 libsz2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 136s libthai0 libtiff6 libtk8.6 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 136s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 136s littler nanook nanook-examples openjdk-21-jre-headless r-base-core 136s r-cran-cli r-cran-colorspace r-cran-fansi r-cran-farver r-cran-ggplot2 136s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-isoband r-cran-labeling 136s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 136s r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar 136s r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr r-cran-r6 r-cran-rcolorbrewer 136s r-cran-rcpp r-cran-reshape r-cran-rlang r-cran-scales r-cran-tibble 136s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr t1utils tex-common 136s texlive-base texlive-binaries texlive-latex-base unzip x11-common xdg-utils 136s zip 136s 0 upgraded, 113 newly installed, 0 to remove and 0 not upgraded. 136s Need to get 163 MB of archives. 136s After this operation, 455 MB of additional disk space will be used. 136s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x ca-certificates-java all 20240118 [11.6 kB] 137s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x java-common all 0.76 [6852 B] 137s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 137s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 137s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 137s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libpcsclite1 s390x 2.3.0-3 [24.4 kB] 137s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x openjdk-21-jre-headless s390x 21.0.5+11-1 [43.8 MB] 138s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x default-jre-headless s390x 2:1.21-76 [3182 B] 138s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 138s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 138s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 138s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 138s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 138s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] 138s Get:15 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 138s Get:16 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 138s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 138s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-5ubuntu1 [1435 kB] 138s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x hdf5-tools s390x 1.10.10+repack-5ubuntu1 [355 kB] 138s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x last-align s390x 1608-1 [1017 kB] 138s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x libapache-pom-java all 33-2 [5874 B] 138s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB] 138s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 138s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 138s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 138s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 138s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 138s Get:28 http://ftpmaster.internal/ubuntu plucky/universe s390x libcommons-parent-java all 56-1 [10.7 kB] 138s Get:29 http://ftpmaster.internal/ubuntu plucky/universe s390x libcommons-io-java all 2.17.0-1 [457 kB] 138s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 138s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 138s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-12ubuntu1 [587 kB] 138s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-12ubuntu1 [151 kB] 138s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 138s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.1.0-1 [537 kB] 138s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 138s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 138s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libkpathsea6 s390x 2024.20240313.70630+ds-5build2 [66.9 kB] 138s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB] 138s Get:40 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 138s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 138s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 138s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.55.0+ds-3 [252 kB] 138s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.55.0+ds-3 [49.7 kB] 139s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.55.0+ds-3 [28.3 kB] 139s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 139s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 139s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 139s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libptexenc1 s390x 2024.20240313.70630+ds-5build2 [43.4 kB] 139s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 139s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 139s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libsynctex2 s390x 2024.20240313.70630+ds-5build2 [64.6 kB] 139s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.15+dfsg-2 [1034 kB] 139s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 139s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libtexlua53-5 s390x 2024.20240313.70630+ds-5build2 [131 kB] 139s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 139s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 139s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 139s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 139s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 139s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.15-1 [828 kB] 139s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 139s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 139s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 139s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 139s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 139s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.72+dfsg.1-1.2build1 [28.6 kB] 139s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu1 [187 kB] 139s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 139s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 139s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.2-1 [28.6 MB] 140s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 140s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 140s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.3-1 [1349 kB] 140s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 140s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.4-1 [1715 kB] 140s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 140s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 140s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 140s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-63-1 [1113 kB] 140s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 140s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.166-1 [2321 kB] 140s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-1-1 [4448 kB] 141s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 141s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB] 141s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 141s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB] 141s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB] 141s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 141s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 141s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 141s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 141s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 141s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 141s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 141s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 141s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 141s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 141s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 141s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 141s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 141s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB] 142s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 142s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.13-1-1 [1998 kB] 142s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 143s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reshape all 0.8.9-1 [168 kB] 143s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.18 [32.8 kB] 143s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 143s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-5build2 [9171 kB] 144s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20241115-1 [22.5 MB] 146s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20241115-1 [1260 kB] 146s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x nanook all 1.33+dfsg-6 [195 kB] 146s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x nanook-examples all 1.33+dfsg-6 [1814 kB] 146s Preconfiguring packages ... 146s Fetched 163 MB in 9s (17.5 MB/s) 146s Selecting previously unselected package ca-certificates-java. 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55658 files and directories currently installed.) 146s Preparing to unpack .../000-ca-certificates-java_20240118_all.deb ... 146s Unpacking ca-certificates-java (20240118) ... 146s Selecting previously unselected package java-common. 146s Preparing to unpack .../001-java-common_0.76_all.deb ... 146s Unpacking java-common (0.76) ... 146s Selecting previously unselected package liblcms2-2:s390x. 146s Preparing to unpack .../002-liblcms2-2_2.16-2_s390x.deb ... 146s Unpacking liblcms2-2:s390x (2.16-2) ... 146s Selecting previously unselected package libjpeg-turbo8:s390x. 146s Preparing to unpack .../003-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 146s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 146s Selecting previously unselected package libjpeg8:s390x. 146s Preparing to unpack .../004-libjpeg8_8c-2ubuntu11_s390x.deb ... 146s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 146s Selecting previously unselected package libpcsclite1:s390x. 146s Preparing to unpack .../005-libpcsclite1_2.3.0-3_s390x.deb ... 146s Unpacking libpcsclite1:s390x (2.3.0-3) ... 146s Selecting previously unselected package openjdk-21-jre-headless:s390x. 146s Preparing to unpack .../006-openjdk-21-jre-headless_21.0.5+11-1_s390x.deb ... 146s Unpacking openjdk-21-jre-headless:s390x (21.0.5+11-1) ... 147s Selecting previously unselected package default-jre-headless. 147s Preparing to unpack .../007-default-jre-headless_2%3a1.21-76_s390x.deb ... 147s Unpacking default-jre-headless (2:1.21-76) ... 147s Selecting previously unselected package libfreetype6:s390x. 147s Preparing to unpack .../008-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 147s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 147s Selecting previously unselected package fonts-dejavu-mono. 147s Preparing to unpack .../009-fonts-dejavu-mono_2.37-8_all.deb ... 147s Unpacking fonts-dejavu-mono (2.37-8) ... 147s Selecting previously unselected package fonts-dejavu-core. 147s Preparing to unpack .../010-fonts-dejavu-core_2.37-8_all.deb ... 147s Unpacking fonts-dejavu-core (2.37-8) ... 147s Selecting previously unselected package fontconfig-config. 147s Preparing to unpack .../011-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 147s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 147s Selecting previously unselected package libfontconfig1:s390x. 147s Preparing to unpack .../012-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 147s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 147s Selecting previously unselected package fontconfig. 147s Preparing to unpack .../013-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ... 147s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 147s Selecting previously unselected package fonts-lmodern. 147s Preparing to unpack .../014-fonts-lmodern_2.005-1_all.deb ... 147s Unpacking fonts-lmodern (2.005-1) ... 147s Selecting previously unselected package libaec0:s390x. 147s Preparing to unpack .../015-libaec0_1.1.3-1_s390x.deb ... 147s Unpacking libaec0:s390x (1.1.3-1) ... 147s Selecting previously unselected package libsz2:s390x. 147s Preparing to unpack .../016-libsz2_1.1.3-1_s390x.deb ... 147s Unpacking libsz2:s390x (1.1.3-1) ... 147s Selecting previously unselected package libhdf5-103-1t64:s390x. 147s Preparing to unpack .../017-libhdf5-103-1t64_1.10.10+repack-5ubuntu1_s390x.deb ... 147s Unpacking libhdf5-103-1t64:s390x (1.10.10+repack-5ubuntu1) ... 147s Selecting previously unselected package hdf5-tools. 147s Preparing to unpack .../018-hdf5-tools_1.10.10+repack-5ubuntu1_s390x.deb ... 147s Unpacking hdf5-tools (1.10.10+repack-5ubuntu1) ... 147s Selecting previously unselected package last-align. 147s Preparing to unpack .../019-last-align_1608-1_s390x.deb ... 147s Unpacking last-align (1608-1) ... 147s Selecting previously unselected package libapache-pom-java. 147s Preparing to unpack .../020-libapache-pom-java_33-2_all.deb ... 147s Unpacking libapache-pom-java (33-2) ... 147s Selecting previously unselected package libblas3:s390x. 147s Preparing to unpack .../021-libblas3_3.12.0-4_s390x.deb ... 147s Unpacking libblas3:s390x (3.12.0-4) ... 147s Selecting previously unselected package libpixman-1-0:s390x. 147s Preparing to unpack .../022-libpixman-1-0_0.44.0-3_s390x.deb ... 147s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 147s Selecting previously unselected package libxcb-render0:s390x. 147s Preparing to unpack .../023-libxcb-render0_1.17.0-2_s390x.deb ... 147s Unpacking libxcb-render0:s390x (1.17.0-2) ... 147s Selecting previously unselected package libxcb-shm0:s390x. 147s Preparing to unpack .../024-libxcb-shm0_1.17.0-2_s390x.deb ... 147s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 147s Selecting previously unselected package libxrender1:s390x. 147s Preparing to unpack .../025-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 147s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 147s Selecting previously unselected package libcairo2:s390x. 147s Preparing to unpack .../026-libcairo2_1.18.2-2_s390x.deb ... 147s Unpacking libcairo2:s390x (1.18.2-2) ... 147s Selecting previously unselected package libcommons-parent-java. 147s Preparing to unpack .../027-libcommons-parent-java_56-1_all.deb ... 147s Unpacking libcommons-parent-java (56-1) ... 147s Selecting previously unselected package libcommons-io-java. 147s Preparing to unpack .../028-libcommons-io-java_2.17.0-1_all.deb ... 147s Unpacking libcommons-io-java (2.17.0-1) ... 147s Selecting previously unselected package libdatrie1:s390x. 147s Preparing to unpack .../029-libdatrie1_0.2.13-3build1_s390x.deb ... 147s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 147s Selecting previously unselected package libdeflate0:s390x. 147s Preparing to unpack .../030-libdeflate0_1.22-1_s390x.deb ... 147s Unpacking libdeflate0:s390x (1.22-1) ... 147s Selecting previously unselected package libgfortran5:s390x. 147s Preparing to unpack .../031-libgfortran5_14.2.0-12ubuntu1_s390x.deb ... 147s Unpacking libgfortran5:s390x (14.2.0-12ubuntu1) ... 147s Selecting previously unselected package libgomp1:s390x. 147s Preparing to unpack .../032-libgomp1_14.2.0-12ubuntu1_s390x.deb ... 147s Unpacking libgomp1:s390x (14.2.0-12ubuntu1) ... 147s Selecting previously unselected package libgraphite2-3:s390x. 147s Preparing to unpack .../033-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 147s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 147s Selecting previously unselected package libharfbuzz0b:s390x. 147s Preparing to unpack .../034-libharfbuzz0b_10.1.0-1_s390x.deb ... 147s Unpacking libharfbuzz0b:s390x (10.1.0-1) ... 147s Selecting previously unselected package x11-common. 147s Preparing to unpack .../035-x11-common_1%3a7.7+23ubuntu3_all.deb ... 147s Unpacking x11-common (1:7.7+23ubuntu3) ... 147s Selecting previously unselected package libice6:s390x. 147s Preparing to unpack .../036-libice6_2%3a1.1.1-1_s390x.deb ... 147s Unpacking libice6:s390x (2:1.1.1-1) ... 147s Selecting previously unselected package libkpathsea6:s390x. 147s Preparing to unpack .../037-libkpathsea6_2024.20240313.70630+ds-5build2_s390x.deb ... 147s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-5build2) ... 147s Selecting previously unselected package liblapack3:s390x. 147s Preparing to unpack .../038-liblapack3_3.12.0-4_s390x.deb ... 147s Unpacking liblapack3:s390x (3.12.0-4) ... 147s Selecting previously unselected package libmpfi0:s390x. 147s Preparing to unpack .../039-libmpfi0_1.5.4+ds-4_s390x.deb ... 147s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 148s Selecting previously unselected package libthai-data. 148s Preparing to unpack .../040-libthai-data_0.1.29-2build1_all.deb ... 148s Unpacking libthai-data (0.1.29-2build1) ... 148s Selecting previously unselected package libthai0:s390x. 148s Preparing to unpack .../041-libthai0_0.1.29-2build1_s390x.deb ... 148s Unpacking libthai0:s390x (0.1.29-2build1) ... 148s Selecting previously unselected package libpango-1.0-0:s390x. 148s Preparing to unpack .../042-libpango-1.0-0_1.55.0+ds-3_s390x.deb ... 148s Unpacking libpango-1.0-0:s390x (1.55.0+ds-3) ... 148s Selecting previously unselected package libpangoft2-1.0-0:s390x. 148s Preparing to unpack .../043-libpangoft2-1.0-0_1.55.0+ds-3_s390x.deb ... 148s Unpacking libpangoft2-1.0-0:s390x (1.55.0+ds-3) ... 148s Selecting previously unselected package libpangocairo-1.0-0:s390x. 148s Preparing to unpack .../044-libpangocairo-1.0-0_1.55.0+ds-3_s390x.deb ... 148s Unpacking libpangocairo-1.0-0:s390x (1.55.0+ds-3) ... 148s Selecting previously unselected package libpaper2:s390x. 148s Preparing to unpack .../045-libpaper2_2.2.5-0.3_s390x.deb ... 148s Unpacking libpaper2:s390x (2.2.5-0.3) ... 148s Selecting previously unselected package libpaper-utils. 148s Preparing to unpack .../046-libpaper-utils_2.2.5-0.3_s390x.deb ... 148s Unpacking libpaper-utils (2.2.5-0.3) ... 148s Selecting previously unselected package libpotrace0:s390x. 148s Preparing to unpack .../047-libpotrace0_1.16-2build1_s390x.deb ... 148s Unpacking libpotrace0:s390x (1.16-2build1) ... 148s Selecting previously unselected package libptexenc1:s390x. 148s Preparing to unpack .../048-libptexenc1_2024.20240313.70630+ds-5build2_s390x.deb ... 148s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-5build2) ... 148s Selecting previously unselected package libsharpyuv0:s390x. 148s Preparing to unpack .../049-libsharpyuv0_1.4.0-0.1_s390x.deb ... 148s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 148s Selecting previously unselected package libsm6:s390x. 148s Preparing to unpack .../050-libsm6_2%3a1.2.4-1_s390x.deb ... 148s Unpacking libsm6:s390x (2:1.2.4-1) ... 148s Selecting previously unselected package libsynctex2:s390x. 148s Preparing to unpack .../051-libsynctex2_2024.20240313.70630+ds-5build2_s390x.deb ... 148s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-5build2) ... 148s Selecting previously unselected package libtcl8.6:s390x. 148s Preparing to unpack .../052-libtcl8.6_8.6.15+dfsg-2_s390x.deb ... 148s Unpacking libtcl8.6:s390x (8.6.15+dfsg-2) ... 148s Selecting previously unselected package libteckit0:s390x. 148s Preparing to unpack .../053-libteckit0_2.5.12+ds1-1_s390x.deb ... 148s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 148s Selecting previously unselected package libtexlua53-5:s390x. 148s Preparing to unpack .../054-libtexlua53-5_2024.20240313.70630+ds-5build2_s390x.deb ... 148s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-5build2) ... 148s Selecting previously unselected package libjbig0:s390x. 148s Preparing to unpack .../055-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 148s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 148s Selecting previously unselected package libwebp7:s390x. 148s Preparing to unpack .../056-libwebp7_1.4.0-0.1_s390x.deb ... 148s Unpacking libwebp7:s390x (1.4.0-0.1) ... 148s Selecting previously unselected package libtiff6:s390x. 148s Preparing to unpack .../057-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 148s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 148s Selecting previously unselected package libxft2:s390x. 148s Preparing to unpack .../058-libxft2_2.3.6-1build1_s390x.deb ... 148s Unpacking libxft2:s390x (2.3.6-1build1) ... 148s Selecting previously unselected package libxss1:s390x. 148s Preparing to unpack .../059-libxss1_1%3a1.2.3-1build3_s390x.deb ... 148s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 148s Selecting previously unselected package libtk8.6:s390x. 148s Preparing to unpack .../060-libtk8.6_8.6.15-1_s390x.deb ... 148s Unpacking libtk8.6:s390x (8.6.15-1) ... 148s Selecting previously unselected package libxt6t64:s390x. 148s Preparing to unpack .../061-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 148s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 148s Selecting previously unselected package libxmu6:s390x. 148s Preparing to unpack .../062-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 148s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 148s Selecting previously unselected package libxpm4:s390x. 148s Preparing to unpack .../063-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 148s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 148s Selecting previously unselected package libxaw7:s390x. 148s Preparing to unpack .../064-libxaw7_2%3a1.0.16-1_s390x.deb ... 148s Unpacking libxaw7:s390x (2:1.0.16-1) ... 148s Selecting previously unselected package libxi6:s390x. 148s Preparing to unpack .../065-libxi6_2%3a1.8.2-1_s390x.deb ... 148s Unpacking libxi6:s390x (2:1.8.2-1) ... 148s Selecting previously unselected package libzzip-0-13t64:s390x. 148s Preparing to unpack .../066-libzzip-0-13t64_0.13.72+dfsg.1-1.2build1_s390x.deb ... 148s Unpacking libzzip-0-13t64:s390x (0.13.72+dfsg.1-1.2build1) ... 148s Selecting previously unselected package zip. 148s Preparing to unpack .../067-zip_3.0-14ubuntu1_s390x.deb ... 148s Unpacking zip (3.0-14ubuntu1) ... 148s Selecting previously unselected package unzip. 148s Preparing to unpack .../068-unzip_6.0-28ubuntu6_s390x.deb ... 148s Unpacking unzip (6.0-28ubuntu6) ... 148s Selecting previously unselected package xdg-utils. 148s Preparing to unpack .../069-xdg-utils_1.2.1-0ubuntu1_all.deb ... 148s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 148s Selecting previously unselected package r-base-core. 148s Preparing to unpack .../070-r-base-core_4.4.2-1_s390x.deb ... 148s Unpacking r-base-core (4.4.2-1) ... 148s Selecting previously unselected package r-cran-littler. 148s Preparing to unpack .../071-r-cran-littler_0.3.20-2_s390x.deb ... 148s Unpacking r-cran-littler (0.3.20-2) ... 148s Selecting previously unselected package littler. 148s Preparing to unpack .../072-littler_0.3.20-2_all.deb ... 148s Unpacking littler (0.3.20-2) ... 148s Selecting previously unselected package r-cran-cli. 148s Preparing to unpack .../073-r-cran-cli_3.6.3-1_s390x.deb ... 148s Unpacking r-cran-cli (3.6.3-1) ... 148s Selecting previously unselected package r-cran-glue. 148s Preparing to unpack .../074-r-cran-glue_1.8.0-1_s390x.deb ... 148s Unpacking r-cran-glue (1.8.0-1) ... 148s Selecting previously unselected package r-cran-rlang. 148s Preparing to unpack .../075-r-cran-rlang_1.1.4-1_s390x.deb ... 148s Unpacking r-cran-rlang (1.1.4-1) ... 148s Selecting previously unselected package r-cran-lifecycle. 148s Preparing to unpack .../076-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 148s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 148s Selecting previously unselected package r-cran-gtable. 148s Preparing to unpack .../077-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 148s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 148s Selecting previously unselected package r-cran-isoband. 148s Preparing to unpack .../078-r-cran-isoband_0.2.7-1_s390x.deb ... 148s Unpacking r-cran-isoband (0.2.7-1) ... 148s Selecting previously unselected package r-cran-mass. 148s Preparing to unpack .../079-r-cran-mass_7.3-63-1_s390x.deb ... 148s Unpacking r-cran-mass (7.3-63-1) ... 148s Selecting previously unselected package r-cran-lattice. 148s Preparing to unpack .../080-r-cran-lattice_0.22-6-1_s390x.deb ... 148s Unpacking r-cran-lattice (0.22-6-1) ... 148s Selecting previously unselected package r-cran-nlme. 148s Preparing to unpack .../081-r-cran-nlme_3.1.166-1_s390x.deb ... 148s Unpacking r-cran-nlme (3.1.166-1) ... 148s Selecting previously unselected package r-cran-matrix. 148s Preparing to unpack .../082-r-cran-matrix_1.7-1-1_s390x.deb ... 148s Unpacking r-cran-matrix (1.7-1-1) ... 148s Selecting previously unselected package r-cran-mgcv. 148s Preparing to unpack .../083-r-cran-mgcv_1.9-1-1_s390x.deb ... 148s Unpacking r-cran-mgcv (1.9-1-1) ... 148s Selecting previously unselected package r-cran-farver. 148s Preparing to unpack .../084-r-cran-farver_2.1.2-1_s390x.deb ... 148s Unpacking r-cran-farver (2.1.2-1) ... 148s Selecting previously unselected package r-cran-labeling. 148s Preparing to unpack .../085-r-cran-labeling_0.4.3-1_all.deb ... 148s Unpacking r-cran-labeling (0.4.3-1) ... 148s Selecting previously unselected package r-cran-colorspace. 148s Preparing to unpack .../086-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ... 148s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 148s Selecting previously unselected package r-cran-munsell. 148s Preparing to unpack .../087-r-cran-munsell_0.5.1-1_all.deb ... 148s Unpacking r-cran-munsell (0.5.1-1) ... 148s Selecting previously unselected package r-cran-r6. 148s Preparing to unpack .../088-r-cran-r6_2.5.1-1_all.deb ... 148s Unpacking r-cran-r6 (2.5.1-1) ... 148s Selecting previously unselected package r-cran-rcolorbrewer. 148s Preparing to unpack .../089-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 148s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 148s Selecting previously unselected package r-cran-viridislite. 148s Preparing to unpack .../090-r-cran-viridislite_0.4.2-2_all.deb ... 148s Unpacking r-cran-viridislite (0.4.2-2) ... 148s Selecting previously unselected package r-cran-scales. 149s Preparing to unpack .../091-r-cran-scales_1.3.0-1_all.deb ... 149s Unpacking r-cran-scales (1.3.0-1) ... 149s Selecting previously unselected package r-cran-fansi. 149s Preparing to unpack .../092-r-cran-fansi_1.0.5-1_s390x.deb ... 149s Unpacking r-cran-fansi (1.0.5-1) ... 149s Selecting previously unselected package r-cran-magrittr. 149s Preparing to unpack .../093-r-cran-magrittr_2.0.3-1_s390x.deb ... 149s Unpacking r-cran-magrittr (2.0.3-1) ... 149s Selecting previously unselected package r-cran-utf8. 149s Preparing to unpack .../094-r-cran-utf8_1.2.4-1_s390x.deb ... 149s Unpacking r-cran-utf8 (1.2.4-1) ... 149s Selecting previously unselected package r-cran-vctrs. 149s Preparing to unpack .../095-r-cran-vctrs_0.6.5-1_s390x.deb ... 149s Unpacking r-cran-vctrs (0.6.5-1) ... 149s Selecting previously unselected package r-cran-pillar. 149s Preparing to unpack .../096-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 149s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-pkgconfig. 149s Preparing to unpack .../097-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 149s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 149s Selecting previously unselected package r-cran-tibble. 149s Preparing to unpack .../098-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 149s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 149s Selecting previously unselected package r-cran-withr. 149s Preparing to unpack .../099-r-cran-withr_3.0.2+dfsg-1_all.deb ... 149s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 149s Selecting previously unselected package r-cran-ggplot2. 149s Preparing to unpack .../100-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 149s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 149s Selecting previously unselected package r-cran-gridextra. 149s Preparing to unpack .../101-r-cran-gridextra_2.3-3build1_all.deb ... 149s Unpacking r-cran-gridextra (2.3-3build1) ... 149s Selecting previously unselected package r-cran-pkgkitten. 149s Preparing to unpack .../102-r-cran-pkgkitten_0.2.4-1_all.deb ... 149s Unpacking r-cran-pkgkitten (0.2.4-1) ... 149s Selecting previously unselected package r-cran-rcpp. 149s Preparing to unpack .../103-r-cran-rcpp_1.0.13-1-1_s390x.deb ... 149s Unpacking r-cran-rcpp (1.0.13-1-1) ... 149s Selecting previously unselected package r-cran-plyr. 149s Preparing to unpack .../104-r-cran-plyr_1.8.9-1_s390x.deb ... 149s Unpacking r-cran-plyr (1.8.9-1) ... 149s Selecting previously unselected package r-cran-reshape. 149s Preparing to unpack .../105-r-cran-reshape_0.8.9-1_all.deb ... 149s Unpacking r-cran-reshape (0.8.9-1) ... 149s Selecting previously unselected package tex-common. 149s Preparing to unpack .../106-tex-common_6.18_all.deb ... 149s Unpacking tex-common (6.18) ... 149s Selecting previously unselected package t1utils. 149s Preparing to unpack .../107-t1utils_1.41-4build3_s390x.deb ... 149s Unpacking t1utils (1.41-4build3) ... 149s Selecting previously unselected package texlive-binaries. 149s Preparing to unpack .../108-texlive-binaries_2024.20240313.70630+ds-5build2_s390x.deb ... 149s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 149s Selecting previously unselected package texlive-base. 149s Preparing to unpack .../109-texlive-base_2024.20241115-1_all.deb ... 149s Unpacking texlive-base (2024.20241115-1) ... 150s Selecting previously unselected package texlive-latex-base. 150s Preparing to unpack .../110-texlive-latex-base_2024.20241115-1_all.deb ... 150s Unpacking texlive-latex-base (2024.20241115-1) ... 150s Selecting previously unselected package nanook. 150s Preparing to unpack .../111-nanook_1.33+dfsg-6_all.deb ... 150s Unpacking nanook (1.33+dfsg-6) ... 150s Selecting previously unselected package nanook-examples. 150s Preparing to unpack .../112-nanook-examples_1.33+dfsg-6_all.deb ... 150s Unpacking nanook-examples (1.33+dfsg-6) ... 150s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 150s Setting up liblcms2-2:s390x (2.16-2) ... 150s Setting up libpixman-1-0:s390x (0.44.0-3) ... 150s Setting up libsharpyuv0:s390x (1.4.0-0.1) ... 150s Setting up nanook-examples (1.33+dfsg-6) ... 150s Setting up libxpm4:s390x (1:3.5.17-1build2) ... 150s Setting up libxi6:s390x (2:1.8.2-1) ... 150s Setting up java-common (0.76) ... 150s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 150s Setting up libdatrie1:s390x (0.2.13-3build1) ... 150s Setting up libxcb-render0:s390x (1.17.0-2) ... 150s Setting up unzip (6.0-28ubuntu6) ... 150s Setting up x11-common (1:7.7+23ubuntu3) ... 151s Setting up libdeflate0:s390x (1.22-1) ... 151s Setting up libxcb-shm0:s390x (1.17.0-2) ... 151s Setting up libgomp1:s390x (14.2.0-12ubuntu1) ... 151s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 151s Setting up libaec0:s390x (1.1.3-1) ... 151s Setting up last-align (1608-1) ... 151s Setting up tex-common (6.18) ... 151s update-language: texlive-base not installed and configured, doing nothing! 151s Setting up zip (3.0-14ubuntu1) ... 151s Setting up libblas3:s390x (3.12.0-4) ... 151s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 151s Setting up libzzip-0-13t64:s390x (0.13.72+dfsg.1-1.2build1) ... 151s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 151s Setting up libteckit0:s390x (2.5.12+ds1-1) ... 151s Setting up libapache-pom-java (33-2) ... 151s Setting up t1utils (1.41-4build3) ... 151s Setting up libtexlua53-5:s390x (2024.20240313.70630+ds-5build2) ... 151s Setting up fonts-dejavu-mono (2.37-8) ... 151s Setting up libtcl8.6:s390x (8.6.15+dfsg-2) ... 151s Setting up libmpfi0:s390x (1.5.4+ds-4) ... 151s Setting up fonts-dejavu-core (2.37-8) ... 151s Setting up libpcsclite1:s390x (2.3.0-3) ... 151s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 151s Setting up libkpathsea6:s390x (2024.20240313.70630+ds-5build2) ... 151s Setting up libgfortran5:s390x (14.2.0-12ubuntu1) ... 151s Setting up libwebp7:s390x (1.4.0-0.1) ... 151s Setting up fonts-lmodern (2.005-1) ... 151s Setting up libharfbuzz0b:s390x (10.1.0-1) ... 151s Setting up libthai-data (0.1.29-2build1) ... 151s Setting up libxss1:s390x (1:1.2.3-1build3) ... 151s Setting up libpaper2:s390x (2.2.5-0.3) ... 151s Setting up ca-certificates-java (20240118) ... 151s No JRE found. Skipping Java certificates setup. 151s Setting up xdg-utils (1.2.1-0ubuntu1) ... 151s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 151s Setting up libsz2:s390x (1.1.3-1) ... 151s Setting up libsynctex2:s390x (2024.20240313.70630+ds-5build2) ... 151s Setting up libpotrace0:s390x (1.16-2build1) ... 151s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 151s Setting up libice6:s390x (2:1.1.1-1) ... 151s Setting up liblapack3:s390x (3.12.0-4) ... 151s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 151s Setting up openjdk-21-jre-headless:s390x (21.0.5+11-1) ... 151s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/java to provide /usr/bin/java (java) in auto mode 151s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 151s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 151s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 151s update-alternatives: using /usr/lib/jvm/java-21-openjdk-s390x/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 151s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 151s Setting up libcommons-parent-java (56-1) ... 151s Setting up libpaper-utils (2.2.5-0.3) ... 151s Setting up libthai0:s390x (0.1.29-2build1) ... 151s Setting up libptexenc1:s390x (2024.20240313.70630+ds-5build2) ... 151s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 151s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 151s Setting up libhdf5-103-1t64:s390x (1.10.10+repack-5ubuntu1) ... 151s Setting up libsm6:s390x (2:1.2.4-1) ... 151s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 153s Regenerating fonts cache... done. 153s Setting up libxft2:s390x (2.3.6-1build1) ... 153s Setting up libcommons-io-java (2.17.0-1) ... 153s Setting up libtk8.6:s390x (8.6.15-1) ... 153s Setting up libpango-1.0-0:s390x (1.55.0+ds-3) ... 153s Setting up libcairo2:s390x (1.18.2-2) ... 153s Setting up hdf5-tools (1.10.10+repack-5ubuntu1) ... 153s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 153s Setting up libpangoft2-1.0-0:s390x (1.55.0+ds-3) ... 153s Setting up libpangocairo-1.0-0:s390x (1.55.0+ds-3) ... 153s Setting up libxmu6:s390x (2:1.1.3-3build2) ... 153s Setting up libxaw7:s390x (2:1.0.16-1) ... 153s Setting up r-base-core (4.4.2-1) ... 153s Creating config file /etc/R/Renviron with new version 153s Setting up r-cran-labeling (0.4.3-1) ... 153s Setting up r-cran-lattice (0.22-6-1) ... 153s Setting up r-cran-nlme (3.1.166-1) ... 153s Setting up r-cran-farver (2.1.2-1) ... 153s Setting up r-cran-viridislite (0.4.2-2) ... 153s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ... 153s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 153s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 153s Setting up r-cran-r6 (2.5.1-1) ... 153s Setting up r-cran-pkgkitten (0.2.4-1) ... 153s Setting up texlive-base (2024.20241115-1) ... 153s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 154s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 154s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 154s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 154s Setting up r-cran-magrittr (2.0.3-1) ... 154s Setting up r-cran-littler (0.3.20-2) ... 154s Setting up r-cran-rcpp (1.0.13-1-1) ... 154s Setting up r-cran-rlang (1.1.4-1) ... 154s Setting up littler (0.3.20-2) ... 154s Setting up r-cran-withr (3.0.2+dfsg-1) ... 154s Setting up r-cran-fansi (1.0.5-1) ... 154s Setting up r-cran-mass (7.3-63-1) ... 154s Setting up r-cran-glue (1.8.0-1) ... 154s Setting up r-cran-cli (3.6.3-1) ... 154s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 154s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 154s Setting up r-cran-utf8 (1.2.4-1) ... 154s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 154s Setting up texlive-latex-base (2024.20241115-1) ... 154s Setting up r-cran-plyr (1.8.9-1) ... 154s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 154s Setting up r-cran-isoband (0.2.7-1) ... 154s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 154s Setting up r-cran-matrix (1.7-1-1) ... 154s Setting up r-cran-mgcv (1.9-1-1) ... 154s Setting up r-cran-vctrs (0.6.5-1) ... 154s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 154s Setting up r-cran-reshape (0.8.9-1) ... 154s Setting up r-cran-munsell (0.5.1-1) ... 154s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 154s Setting up r-cran-gridextra (2.3-3build1) ... 154s Setting up r-cran-scales (1.3.0-1) ... 154s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 154s Processing triggers for libc-bin (2.40-4ubuntu1) ... 154s Processing triggers for man-db (2.13.0-1) ... 155s Processing triggers for install-info (7.1.1-1) ... 155s Processing triggers for ca-certificates-java (20240118) ... 155s Adding debian:ACCVRAIZ1.pem 155s Adding debian:AC_RAIZ_FNMT-RCM.pem 155s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 155s Adding debian:ANF_Secure_Server_Root_CA.pem 155s Adding debian:Actalis_Authentication_Root_CA.pem 155s Adding debian:AffirmTrust_Commercial.pem 155s Adding debian:AffirmTrust_Networking.pem 155s Adding debian:AffirmTrust_Premium.pem 155s Adding debian:AffirmTrust_Premium_ECC.pem 155s Adding debian:Amazon_Root_CA_1.pem 155s Adding debian:Amazon_Root_CA_2.pem 155s Adding debian:Amazon_Root_CA_3.pem 155s Adding debian:Amazon_Root_CA_4.pem 155s Adding debian:Atos_TrustedRoot_2011.pem 155s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 155s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 155s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 155s Adding debian:BJCA_Global_Root_CA1.pem 155s Adding debian:BJCA_Global_Root_CA2.pem 155s Adding debian:Baltimore_CyberTrust_Root.pem 155s Adding debian:Buypass_Class_2_Root_CA.pem 155s Adding debian:Buypass_Class_3_Root_CA.pem 155s Adding debian:CA_Disig_Root_R2.pem 155s Adding debian:CFCA_EV_ROOT.pem 155s Adding debian:COMODO_Certification_Authority.pem 155s Adding debian:COMODO_ECC_Certification_Authority.pem 155s Adding debian:COMODO_RSA_Certification_Authority.pem 155s Adding debian:Certainly_Root_E1.pem 155s Adding debian:Certainly_Root_R1.pem 155s Adding debian:Certigna.pem 155s Adding debian:Certigna_Root_CA.pem 155s Adding debian:Certum_EC-384_CA.pem 155s Adding debian:Certum_Trusted_Network_CA.pem 155s Adding debian:Certum_Trusted_Network_CA_2.pem 155s Adding debian:Certum_Trusted_Root_CA.pem 155s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 155s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 155s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 155s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 155s Adding debian:Comodo_AAA_Services_root.pem 155s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 155s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 155s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 155s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 155s Adding debian:DigiCert_Assured_ID_Root_CA.pem 155s Adding debian:DigiCert_Assured_ID_Root_G2.pem 155s Adding debian:DigiCert_Assured_ID_Root_G3.pem 155s Adding debian:DigiCert_Global_Root_CA.pem 155s Adding debian:DigiCert_Global_Root_G2.pem 155s Adding debian:DigiCert_Global_Root_G3.pem 155s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 155s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 155s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 155s Adding debian:DigiCert_Trusted_Root_G4.pem 155s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 155s Adding debian:Entrust_Root_Certification_Authority.pem 155s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 155s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 155s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 155s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 155s Adding debian:GLOBALTRUST_2020.pem 155s Adding debian:GTS_Root_R1.pem 155s Adding debian:GTS_Root_R2.pem 155s Adding debian:GTS_Root_R3.pem 155s Adding debian:GTS_Root_R4.pem 155s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 155s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 155s Adding debian:GlobalSign_Root_CA.pem 155s Adding debian:GlobalSign_Root_CA_-_R3.pem 155s Adding debian:GlobalSign_Root_CA_-_R6.pem 155s Adding debian:GlobalSign_Root_E46.pem 155s Adding debian:GlobalSign_Root_R46.pem 155s Adding debian:Go_Daddy_Class_2_CA.pem 155s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 155s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 155s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 155s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 155s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 155s Adding debian:HiPKI_Root_CA_-_G1.pem 155s Adding debian:Hongkong_Post_Root_CA_3.pem 155s Adding debian:ISRG_Root_X1.pem 155s Adding debian:ISRG_Root_X2.pem 155s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 155s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 155s Adding debian:Izenpe.com.pem 155s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 155s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 155s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 155s Adding debian:NAVER_Global_Root_Certification_Authority.pem 155s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 155s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 155s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 155s Adding debian:QuoVadis_Root_CA_1_G3.pem 155s Adding debian:QuoVadis_Root_CA_2.pem 155s Adding debian:QuoVadis_Root_CA_2_G3.pem 155s Adding debian:QuoVadis_Root_CA_3.pem 155s Adding debian:QuoVadis_Root_CA_3_G3.pem 155s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 155s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 155s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 155s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 155s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 155s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 155s Adding debian:SZAFIR_ROOT_CA2.pem 155s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 155s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 155s Adding debian:SecureSign_RootCA11.pem 155s Adding debian:SecureTrust_CA.pem 155s Adding debian:Secure_Global_CA.pem 155s Adding debian:Security_Communication_ECC_RootCA1.pem 155s Adding debian:Security_Communication_RootCA2.pem 155s Adding debian:Security_Communication_RootCA3.pem 155s Adding debian:Security_Communication_Root_CA.pem 155s Adding debian:Starfield_Class_2_CA.pem 155s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 155s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 155s Adding debian:SwissSign_Gold_CA_-_G2.pem 155s Adding debian:SwissSign_Silver_CA_-_G2.pem 155s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 155s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 155s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 155s Adding debian:TWCA_Global_Root_CA.pem 155s Adding debian:TWCA_Root_Certification_Authority.pem 155s Adding debian:TeliaSonera_Root_CA_v1.pem 155s Adding debian:Telia_Root_CA_v2.pem 155s Adding debian:TrustAsia_Global_Root_CA_G3.pem 155s Adding debian:TrustAsia_Global_Root_CA_G4.pem 155s Adding debian:Trustwave_Global_Certification_Authority.pem 155s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 155s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 155s Adding debian:TunTrust_Root_CA.pem 155s Adding debian:UCA_Extended_Validation_Root.pem 155s Adding debian:UCA_Global_G2_Root.pem 155s Adding debian:USERTrust_ECC_Certification_Authority.pem 155s Adding debian:USERTrust_RSA_Certification_Authority.pem 155s Adding debian:XRamp_Global_CA_Root.pem 155s Adding debian:certSIGN_ROOT_CA.pem 155s Adding debian:certSIGN_Root_CA_G2.pem 155s Adding debian:e-Szigno_Root_CA_2017.pem 155s Adding debian:ePKI_Root_Certification_Authority.pem 155s Adding debian:emSign_ECC_Root_CA_-_C3.pem 155s Adding debian:emSign_ECC_Root_CA_-_G3.pem 155s Adding debian:emSign_Root_CA_-_C1.pem 155s Adding debian:emSign_Root_CA_-_G1.pem 155s Adding debian:vTrus_ECC_Root_CA.pem 155s Adding debian:vTrus_Root_CA.pem 155s done. 155s Setting up default-jre-headless (2:1.21-76) ... 155s Setting up nanook (1.33+dfsg-6) ... 155s Processing triggers for tex-common (6.18) ... 156s Running updmap-sys. This may take some time... done. 156s Running mktexlsr /var/lib/texmf ... done. 156s Building format(s) --all. 191s This may take some time... done. 192s autopkgtest [14:01:23]: test run-unit-test: [----------------------- 204s 204s NanoOK v1.33 204s 204s Comments/bugs to: richard.leggett@earlham.ac.uk 204s Follow NanoOK on twitter: @NanoOK_Software 204s 204s Scripts dir: /usr/share/nanook/bin 204s 204s Checking dependencies 204s *** ERROR: Couldn't find Rscript - is R installed? *** 204s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 204s h5dump: Version 1.10.10 204s 204s Making directory /tmp/autopkgtest.OQHw2E/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/fasta 204s Checking FAST5 directory structure... 204s Using pass/fail dirs: yes 204s Using batch dirs: no 204s Using barcodes: no 204s 207s Processing [ ] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 207s 207s DONE 207s 207s NanoOK v1.33 207s 207s Comments/bugs to: richard.leggett@earlham.ac.uk 207s Follow NanoOK on twitter: @NanoOK_Software 207s 207s Scripts dir: /usr/share/nanook/bin 207s 207s Checking dependencies 207s *** ERROR: Couldn't find Rscript - is R installed? *** 207s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 207s h5dump: Version 1.10.10 207s 207s Making directory /tmp/autopkgtest.OQHw2E/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/last 207s Making directory /tmp/autopkgtest.OQHw2E/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/last 207s Checking FASTA/Q directory structure... 207s Using pass/fail dirs: yes 207s Using batch dirs: no 207s Using barcodes: no 207s 210s Processing [ ] 0/3 Processing [================ ] 1/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 210s 210s DONE 210s 210s NanoOK v1.33 210s 210s Comments/bugs to: richard.leggett@earlham.ac.uk 210s Follow NanoOK on twitter: @NanoOK_Software 210s 210s Scripts dir: /usr/share/nanook/bin 210s 210s Checking dependencies 210s *** ERROR: Couldn't find Rscript - is R installed? *** 210s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 210s h5dump: Version 1.10.10 210s 210s Checking FASTA/Q directory structure... 210s Using pass/fail dirs: yes 210s Using batch dirs: no 210s Using barcodes: no 210s 210s Using .sizes file ecoli_dh10b_cs.fasta.sizes 210s Note: if you have changed the reference file, you need to delete the .sizes file and re-run. 210s 210s Reading reference sizes and making directories 210s Escherichia_coli 4686137 210s Control_sequence 3560 210s 210s Calculating reference GC 210s Escherichia_coli 210s Control_sequence 210s 210s Parsing Template 210s [ ] 0/1 [==================================================] 1/1 210s 210s Error: unable to find any Template alignments to process. 210s Common reasons for this: 210s 1. Failure to index the reference with the alignment tool, resulting in alignment files of 0 bytes 210s 2. Wrong reference specified to the align stage, resulting in no alignments 210s 3. When indexing with LAST, the output prefix needs to be the same as the reference FASTA file, minus the .fasta extension 210s e.g. lastdb -Q 0 referencename referencename.fasta 210s 211s autopkgtest [14:01:42]: test run-unit-test: -----------------------] 211s autopkgtest [14:01:42]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 211s run-unit-test FAIL non-zero exit status 1 213s autopkgtest [14:01:44]: @@@@@@@@@@@@@@@@@@@@ summary 213s run-unit-test FAIL non-zero exit status 1 221s nova [W] Using flock in prodstack6-s390x 221s Creating nova instance adt-plucky-s390x-nanook-20250117-135811-juju-7f2275-prod-proposed-migration-environment-2-542ae393-3aa3-40d5-af35-bcbf38087e7c from image adt/ubuntu-plucky-s390x-server-20250117.img (UUID 77043c30-ce55-43c6-ae27-2590a56e9de9)... 221s nova [W] Timed out waiting for 084d672e-b0c8-4ca2-a719-1d665412f256 to get deleted.