0s autopkgtest [12:16:48]: starting date and time: 2025-02-19 12:16:48+0000 0s autopkgtest [12:16:48]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [12:16:48]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.w8ze4iqm/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade mdtraj --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.1.3-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-2.secgroup --name adt-plucky-s390x-mdtraj-20250219-121648-juju-7f2275-prod-proposed-migration-environment-20-9afe2b02-35d4-415f-9eca-db3b64fcf1c1 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 110s autopkgtest [12:18:38]: testbed dpkg architecture: s390x 110s autopkgtest [12:18:38]: testbed apt version: 2.9.30 110s autopkgtest [12:18:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 110s autopkgtest [12:18:38]: testbed release detected to be: None 111s autopkgtest [12:18:39]: updating testbed package index (apt update) 111s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 112s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 112s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 112s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 112s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.9 kB] 112s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.1 kB] 112s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [750 kB] 112s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B] 112s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [95.1 kB] 112s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [760 B] 112s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [646 kB] 112s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [4900 B] 112s Fetched 1700 kB in 1s (1692 kB/s) 113s Reading package lists... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s Calculating upgrade... 114s The following packages were automatically installed and are no longer required: 114s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 114s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 114s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 114s linux-tools-6.11.0-8-generic 114s Use 'sudo apt autoremove' to remove them. 114s The following packages will be upgraded: 114s iproute2 liblsof0 libp11-kit0 lsof 114s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s Need to get 1791 kB of archives. 114s After this operation, 17.4 kB of additional disk space will be used. 114s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x iproute2 s390x 6.13.0-1ubuntu1 [1174 kB] 114s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libp11-kit0 s390x 0.25.5-2ubuntu3 [316 kB] 114s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x lsof s390x 4.99.4+dfsg-1 [243 kB] 114s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x liblsof0 s390x 4.99.4+dfsg-1 [58.5 kB] 115s Preconfiguring packages ... 115s Fetched 1791 kB in 1s (2810 kB/s) 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81030 files and directories currently installed.) 115s Preparing to unpack .../iproute2_6.13.0-1ubuntu1_s390x.deb ... 115s Unpacking iproute2 (6.13.0-1ubuntu1) over (6.10.0-2ubuntu1) ... 115s Preparing to unpack .../libp11-kit0_0.25.5-2ubuntu3_s390x.deb ... 115s Unpacking libp11-kit0:s390x (0.25.5-2ubuntu3) over (0.25.5-2ubuntu2) ... 115s Preparing to unpack .../lsof_4.99.4+dfsg-1_s390x.deb ... 115s Unpacking lsof (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 115s Preparing to unpack .../liblsof0_4.99.4+dfsg-1_s390x.deb ... 115s Unpacking liblsof0 (4.99.4+dfsg-1) over (4.99.3+dfsg-2) ... 115s Setting up liblsof0 (4.99.4+dfsg-1) ... 115s Setting up iproute2 (6.13.0-1ubuntu1) ... 115s Setting up libp11-kit0:s390x (0.25.5-2ubuntu3) ... 115s Setting up lsof (4.99.4+dfsg-1) ... 115s Processing triggers for man-db (2.13.0-1) ... 115s Processing triggers for libc-bin (2.40-4ubuntu1) ... 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 116s The following packages will be REMOVED: 116s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 116s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 116s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 116s linux-tools-6.11.0-8-generic* 116s 0 upgraded, 0 newly installed, 9 to remove and 0 not upgraded. 116s After this operation, 167 MB disk space will be freed. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81031 files and directories currently installed.) 116s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 116s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 116s Removing libpython3.12t64:s390x (3.12.9-1) ... 116s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 116s Removing libnsl2:s390x (1.3.0-3build3) ... 116s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 116s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 116s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 117s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 117s Processing triggers for libc-bin (2.40-4ubuntu1) ... 117s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55931 files and directories currently installed.) 117s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 117s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 117s autopkgtest [12:18:45]: upgrading testbed (apt dist-upgrade and autopurge) 117s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 118s Starting 2 pkgProblemResolver with broken count: 0 118s Done 118s Entering ResolveByKeep 118s 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 119s Starting pkgProblemResolver with broken count: 0 119s Starting 2 pkgProblemResolver with broken count: 0 119s Done 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s autopkgtest [12:18:47]: rebooting testbed after setup commands that affected boot 140s autopkgtest [12:19:08]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP Tue Feb 4 15:05:57 UTC 2025 142s autopkgtest [12:19:10]: @@@@@@@@@@@@@@@@@@@@ apt-source mdtraj 148s Get:1 http://ftpmaster.internal/ubuntu plucky/universe mdtraj 1.10.3-2 (dsc) [2677 B] 148s Get:2 http://ftpmaster.internal/ubuntu plucky/universe mdtraj 1.10.3-2 (tar) [22.0 MB] 148s Get:3 http://ftpmaster.internal/ubuntu plucky/universe mdtraj 1.10.3-2 (diff) [300 kB] 148s gpgv: Signature made Tue Feb 11 15:16:54 2025 UTC 148s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 148s gpgv: Can't check signature: No public key 148s dpkg-source: warning: cannot verify inline signature for ./mdtraj_1.10.3-2.dsc: no acceptable signature found 148s autopkgtest [12:19:16]: testing package mdtraj version 1.10.3-2 149s command1 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 150s autopkgtest [12:19:18]: build not needed 150s command2 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s command1 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s autopkgtest [12:19:25]: @@@@@@@@@@@@@@@@@@@@ summary 157s command1 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s command2 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s command1 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s command2 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 157s command2 SKIP Test lists explicitly supported architectures, but the current architecture s390x isn't listed. 162s nova [W] Using flock in prodstack6-s390x 162s flock: timeout while waiting to get lock 162s Creating nova instance adt-plucky-s390x-mdtraj-20250219-121648-juju-7f2275-prod-proposed-migration-environment-20-9afe2b02-35d4-415f-9eca-db3b64fcf1c1 from image adt/ubuntu-plucky-s390x-server-20250219.img (UUID 7af5aa59-4155-4177-a560-02c7dd963d23)... 162s nova [W] Timed out waiting for 769c5441-9e21-4f2b-b8d4-d4d4e7617c39 to get deleted.