0s autopkgtest [15:30:44]: starting date and time: 2025-03-15 15:30:44+0000 0s autopkgtest [15:30:44]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:30:44]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.p68ljvp1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade mdanalysis --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-30.secgroup --name adt-plucky-s390x-mdanalysis-20250315-153044-juju-7f2275-prod-proposed-migration-environment-15-df6bc83d-46d8-4fb8-8e98-94a8a977e095 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 150s autopkgtest [15:33:14]: testbed dpkg architecture: s390x 150s autopkgtest [15:33:14]: testbed apt version: 2.9.33 151s autopkgtest [15:33:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 151s autopkgtest [15:33:15]: testbed release detected to be: None 151s autopkgtest [15:33:15]: updating testbed package index (apt update) 152s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 152s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 152s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 152s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 152s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 152s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 152s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 153s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [80.6 kB] 153s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1940 B] 153s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 153s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [342 kB] 153s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [14.4 kB] 153s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 153s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [328 B] 153s Fetched 1090 kB in 2s (657 kB/s) 154s Reading package lists... 155s + lsb_release --codename --short 155s + RELEASE=plucky 155s + cat 155s + [ plucky != trusty ] 155s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 155s Calculating upgrade... 155s Calculating upgrade... 155s The following packages were automatically installed and are no longer required: 155s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 155s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 155s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 155s linux-tools-6.11.0-8-generic 155s Use 'sudo apt autoremove' to remove them. 155s The following packages will be upgraded: 155s python3-jinja2 strace 155s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 155s Need to get 609 kB of archives. 155s After this operation, 27.6 kB of additional disk space will be used. 155s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 156s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 156s Fetched 609 kB in 1s (609 kB/s) 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 156s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 156s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 156s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 156s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 157s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 157s Setting up strace (6.13+ds-1ubuntu1) ... 157s Processing triggers for man-db (2.13.0-1) ... 157s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 157s + /usr/lib/apt/apt-helper analyze-pattern ?true 157s + uname -r 157s + sed s/\./\\./g 157s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 157s + apt list ?obsolete 157s + tail -n+2 157s + cut -d/ -f1 157s + grep -v ^linux-.*6\.14\.0-10-generic.* 157s + obsolete_pkgs=linux-headers-6.11.0-8-generic 157s linux-headers-6.11.0-8 157s linux-modules-6.11.0-8-generic 157s linux-tools-6.11.0-8-generic 157s linux-tools-6.11.0-8 157s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 158s Solving dependencies... 158s The following packages will be REMOVED: 158s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 158s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 158s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 158s linux-tools-6.11.0-8-generic* 158s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 158s After this operation, 167 MB disk space will be freed. 158s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 158s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 158s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 158s Removing libpython3.12t64:s390x (3.12.9-1) ... 158s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 158s Removing libnsl2:s390x (1.3.0-3build3) ... 158s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 158s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 158s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 159s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 159s Processing triggers for libc-bin (2.41-1ubuntu1) ... 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 159s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 159s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 159s + grep -q trusty /etc/lsb-release 159s + [ ! -d /usr/share/doc/unattended-upgrades ] 159s + [ ! -d /usr/share/doc/lxd ] 159s + [ ! -d /usr/share/doc/lxd-client ] 159s + [ ! -d /usr/share/doc/snapd ] 159s + type iptables 159s + cat 159s + chmod 755 /etc/rc.local 159s + . /etc/rc.local 159s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 159s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 159s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 159s + uname -m 159s + [ s390x = ppc64le ] 159s + [ -d /run/systemd/system ] 159s + systemd-detect-virt --quiet --vm 159s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 159s + cat 159s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 159s + echo COMPRESS=lz4 159s autopkgtest [15:33:23]: upgrading testbed (apt dist-upgrade and autopurge) 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 160s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 160s Starting 2 pkgProblemResolver with broken count: 0 160s Done 160s Entering ResolveByKeep 160s 160s Calculating upgrade... 160s The following packages will be upgraded: 160s libc-bin libc-dev-bin libc6 libc6-dev locales 160s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 160s Need to get 9512 kB of archives. 160s After this operation, 8192 B of additional disk space will be used. 160s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 162s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 162s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 165s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 166s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 171s Preconfiguring packages ... 172s Fetched 9512 kB in 11s (854 kB/s) 172s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 172s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 172s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 172s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 172s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 172s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 172s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 172s Setting up libc6:s390x (2.41-1ubuntu2) ... 172s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 172s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 172s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 172s Setting up libc-bin (2.41-1ubuntu2) ... 172s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 172s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 172s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 172s Setting up locales (2.41-1ubuntu2) ... 172s Generating locales (this might take a while)... 173s en_US.UTF-8... done 173s Generation complete. 173s Setting up libc-dev-bin (2.41-1ubuntu2) ... 173s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 173s Processing triggers for man-db (2.13.0-1) ... 174s Processing triggers for systemd (257.3-1ubuntu3) ... 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Starting pkgProblemResolver with broken count: 0 175s Starting 2 pkgProblemResolver with broken count: 0 175s Done 175s Solving dependencies... 175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s autopkgtest [15:33:40]: rebooting testbed after setup commands that affected boot 197s autopkgtest [15:34:01]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 200s autopkgtest [15:34:04]: @@@@@@@@@@@@@@@@@@@@ apt-source mdanalysis 272s Get:1 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (dsc) [2947 B] 272s Get:2 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (tar) [60.8 MB] 272s Get:3 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.8.0-4build1 (diff) [11.2 kB] 272s gpgv: Signature made Tue Mar 4 14:49:32 2025 UTC 272s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 272s gpgv: Can't check signature: No public key 272s dpkg-source: warning: cannot verify inline signature for ./mdanalysis_2.8.0-4build1.dsc: no acceptable signature found 273s autopkgtest [15:35:17]: testing package mdanalysis version 2.8.0-4build1 274s autopkgtest [15:35:18]: build not needed 281s autopkgtest [15:35:25]: test test-mdanalysis: preparing testbed 281s Reading package lists... 281s Building dependency tree... 281s Reading state information... 281s Starting pkgProblemResolver with broken count: 0 281s Starting 2 pkgProblemResolver with broken count: 0 281s Done 281s The following NEW packages will be installed: 281s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14 281s cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu cython3 debhelper debugedit 281s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz 281s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 281s fonts-lato fonts-lyx fonts-mathjax fonts-urw-base35 g++ g++-14 281s g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu 281s gcc-s390x-linux-gnu gettext intltool-debian libaec0 libarchive-zip-perl 281s libasan8 libblas3 libcairo2 libcc1-0 libdebhelper-perl libdeflate0 281s libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 281s libfreetype6 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 281s libharfbuzz0b libhdf5-310 libhdf5-hl-310 libimagequant0 libisl23 libitm1 281s libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjs-mathjax 281s libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0 281s liblcms2-2 liblzf1 libmpc3 libnetcdf22 libopenjp2-7 libpixman-1-0 281s libpython3-all-dev libpython3-dev libpython3.13-dev libqhull-r8.0 libraqm0 281s libsharpyuv0 libstdc++-14-dev libsz2 libtcl8.6 libtiff6 libtk8.6 libtool 281s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 281s libxft2 libxrender1 libxslt1.1 libxss1 m4 po-debconf 281s pybuild-plugin-pyproject python-matplotlib-data python-mdanalysis-doc 281s python3-alabaster python3-all python3-all-dev python3-biopython 281s python3-brotli python3-build python3-cairo python3-cftime python3-citeproc 281s python3-contourpy python3-cycler python3-dateutil python3-decorator 281s python3-defusedxml python3-dev python3-docutils python3-duecredit 281s python3-fasteners python3-fonttools python3-freetype python3-fs 281s python3-griddataformats python3-h5py python3-h5py-serial python3-hypothesis 281s python3-imagesize python3-iniconfig python3-installer python3-joblib 281s python3-kiwisolver python3-latexcodec python3-looseversion python3-lxml 281s python3-lz4 python3-matplotlib python3-mda-xdrlib python3-mdanalysis 281s python3-mmtf python3-monotonic python3-mpmath python3-mrcfile 281s python3-msgpack python3-msmb-theme python3-netcdf4 python3-networkx 281s python3-numpy python3-numpy-dev python3-packaging python3-pandas 281s python3-pandas-lib python3-pil python3-pil.imagetk python3-platformdirs 281s python3-pluggy python3-pybtex python3-pybtex-docutils 281s python3-pyproject-hooks python3-pytest python3-pytz python3-reportlab 281s python3-rlpycairo python3-roman python3-scipy python3-seaborn python3-six 281s python3-sklearn python3-sklearn-lib python3-snowballstemmer 281s python3-sortedcontainers python3-sphinx python3-sphinx-rtd-theme 281s python3-sphinx-sitemap python3-sphinxcontrib.bibtex 281s python3-sphinxcontrib.jquery python3-sympy python3-threadpoolctl python3-tk 281s python3-toml python3-tqdm python3-tz python3-ufolib2 python3-unicodedata2 281s python3-wheel python3.12-tk python3.13-dev python3.13-tk sgml-base 281s sphinx-common sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data w3c-sgml-lib 281s x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev 282s 0 upgraded, 200 newly installed, 0 to remove and 0 not upgraded. 282s Need to get 208 MB of archives. 282s After this operation, 835 MB of additional disk space will be used. 282s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-lato all 2.015-1 [2781 kB] 286s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy-dev s390x 1:2.2.3+ds-5 [147 kB] 286s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 287s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 288s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 293s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:2.2.3+ds-5 [4396 kB] 300s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x sgml-base all 1.31 [11.4 kB] 300s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x m4 s390x 1.4.19-7 [259 kB] 300s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x autoconf all 2.72-3ubuntu1 [383 kB] 301s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x autotools-dev all 20220109.1 [44.9 kB] 301s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x automake all 1:1.17-3ubuntu1 [572 kB] 301s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x autopoint all 0.23.1-1 [619 kB] 302s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 304s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 305s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 305s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 307s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 307s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 307s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 308s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 308s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 325s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB] 326s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB] 326s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 326s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 326s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 326s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 327s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-8 [657 kB] 329s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x blt s390x 2.5.3+dfsg-8 [4826 B] 329s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 330s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 330s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB] 342s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B] 342s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 342s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 342s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB] 343s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB] 343s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB] 343s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB] 346s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB] 348s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB] 349s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB] 369s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB] 370s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 370s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 370s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB] 372s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB] 385s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB] 385s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 385s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 385s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 385s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x cython3 s390x 3.0.11+dfsg-2ubuntu2 [2597 kB] 387s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libdebhelper-perl all 13.24.1ubuntu2 [95.4 kB] 387s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libtool all 2.5.4-4 [168 kB] 388s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x dh-autoreconf all 20 [16.1 kB] 388s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] 388s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libfile-stripnondeterminism-perl all 1.14.1-2 [20.3 kB] 388s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x dh-strip-nondeterminism all 1.14.1-2 [5064 B] 388s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x debugedit s390x 1:5.1-2 [50.1 kB] 388s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x dwz s390x 0.15-1build6 [122 kB] 388s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x gettext s390x 0.23.1-1 [1065 kB] 389s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] 389s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x po-debconf all 1.0.21+nmu1 [233 kB] 390s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x debhelper all 13.24.1ubuntu2 [895 kB] 391s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x dh-python all 6.20250308 [118 kB] 391s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x xml-core all 0.19 [20.3 kB] 391s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x docutils-common all 0.21.2+dfsg-2 [131 kB] 391s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 391s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lyx all 2.4.3-1 [171 kB] 391s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 394s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 394s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 394s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 394s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 394s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 394s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 395s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x libexpat1-dev s390x 2.6.4-1 [146 kB] 395s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 395s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 395s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 395s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-310 s390x 1.14.5+repack-3 [1477 kB] 397s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-3 [61.0 kB] 397s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 397s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 397s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 397s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 398s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 398s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 398s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-sphinxdoc all 8.1.3-4 [30.9 kB] 398s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-perl all 4.10000-1 [81.9 kB] 398s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 398s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 398s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x liblzf1 s390x 3.6-4 [7020 B] 398s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x libnetcdf22 s390x 1:4.9.3-1 [533 kB] 399s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 400s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-dev s390x 3.13.2-2 [5597 kB] 406s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3-dev s390x 3.13.2-2 [10.7 kB] 406s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3-all-dev s390x 3.13.2-2 [912 B] 406s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 406s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.2-1 [15.8 kB] 407s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 407s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 407s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 407s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 407s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.5.0-0.1 [12.6 kB] 407s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.5.0-0.1 [25.8 kB] 407s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libxslt1.1 s390x 1.1.39-0exp1ubuntu2 [169 kB] 408s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.2-1 [51.5 kB] 408s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 408s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-toml all 0.10.2-1 [16.5 kB] 408s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-wheel all 0.45.1-1 [57.7 kB] 408s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-build all 1.2.2-1 [31.0 kB] 408s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 408s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x pybuild-plugin-pyproject all 6.20250308 [1726 B] 408s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x python-matplotlib-data all 3.8.3-7build1 [2934 kB] 411s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 418s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x python-mdanalysis-doc all 2.8.0-4build1 [3458 kB] 422s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all s390x 3.13.2-2 [886 B] 422s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-dev s390x 3.13.2-2 [513 kB] 422s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dev s390x 3.13.2-2 [26.7 kB] 422s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x python3-all-dev s390x 3.13.2-2 [916 B] 422s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-tk s390x 3.12.9-1 [117 kB] 423s Get:123 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-tk s390x 3.13.2-2 [108 kB] 423s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tk s390x 3.13.1-1 [9770 B] 423s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pil.imagetk s390x 11.1.0-5build1 [9668 B] 423s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.3-2 [207 kB] 423s Get:127 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 11.1.0-5build1 [498 kB] 424s Get:128 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cairo s390x 1.26.1-2build2 [120 kB] 424s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 424s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 424s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-reportlab all 4.3.1-1 [1137 kB] 425s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 425s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-biopython s390x 1.85+dfsg-2build1 [1745 kB] 427s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-brotli s390x 1.1.0-2build4 [380 kB] 428s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cftime s390x 1.6.4-2 [226 kB] 428s Get:136 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lxml s390x 5.3.1-1build1 [1370 kB] 430s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-citeproc all 0.6.0-3 [98.4 kB] 430s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-contourpy s390x 1.3.1-1build1 [197 kB] 430s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cycler all 0.12.1-1 [9716 B] 430s Get:140 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-3 [80.2 kB] 430s Get:141 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 430s Get:142 http://ftpmaster.internal/ubuntu plucky/main s390x python3-defusedxml all 0.7.1-3 [42.2 kB] 430s Get:143 http://ftpmaster.internal/ubuntu plucky/main s390x python3-roman all 5.0-1 [10.3 kB] 430s Get:144 http://ftpmaster.internal/ubuntu plucky/main s390x python3-docutils all 0.21.2+dfsg-2 [409 kB] 431s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-looseversion all 1.3.0-3 [8354 B] 431s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-duecredit all 0.10.2-2 [66.0 kB] 431s Get:147 http://ftpmaster.internal/ubuntu plucky/main s390x python3-monotonic all 1.6-3 [5344 B] 431s Get:148 http://ftpmaster.internal/ubuntu plucky/main s390x python3-fasteners all 0.18-2 [12.5 kB] 431s Get:149 http://ftpmaster.internal/ubuntu plucky/main s390x python3-platformdirs all 4.3.6-1 [16.8 kB] 431s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fs all 2.4.16-7 [90.8 kB] 431s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-lz4 s390x 4.4.0+dfsg-1build1 [26.6 kB] 431s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.14.1-4ubuntu2 [18.0 MB] 453s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 453s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sympy all 1.13.3-5 [4229 kB] 458s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 458s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-unicodedata2 s390x 15.1.0+ds-1build3 [361 kB] 459s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x unicode-data all 15.1.0-1 [8878 kB] 469s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fonttools s390x 4.55.3-2build1 [1496 kB] 471s Get:159 http://ftpmaster.internal/ubuntu plucky/main s390x sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1014 kB] 472s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mrcfile all 1.5.4-2 [116 kB] 472s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-griddataformats all 1.0.2-2 [2107 kB] 474s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-h5py-serial s390x 3.13.0-1 [1185 kB] 475s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-h5py all 3.13.0-1 [7978 B] 475s Get:164 http://ftpmaster.internal/ubuntu plucky/main s390x python3-sortedcontainers all 2.4.0-2 [27.6 kB] 476s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-hypothesis all 6.127.4-1 [335 kB] 476s Get:166 http://ftpmaster.internal/ubuntu plucky/main s390x python3-imagesize all 1.4.1-1 [6844 B] 476s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 476s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.4.2-3 [205 kB] 476s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-kiwisolver s390x 1.4.7-3build1 [55.0 kB] 476s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-latexcodec all 3.0.0-1 [16.6 kB] 476s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib s390x 3.8.3-7build1 [17.3 MB] 496s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mda-xdrlib all 0.2.0-3 [11.4 kB] 496s Get:173 http://ftpmaster.internal/ubuntu plucky/main s390x python3-msgpack s390x 1.0.3-3build4 [87.7 kB] 496s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mmtf all 1.1.3-1 [16.2 kB] 496s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-threadpoolctl all 3.1.0-1 [21.3 kB] 496s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-tqdm all 4.67.1-2 [92.5 kB] 496s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mdanalysis s390x 2.8.0-4build1 [3840 kB] 501s Get:178 http://ftpmaster.internal/ubuntu plucky/main s390x sphinx-common all 8.1.3-4 [663 kB] 502s Get:179 http://ftpmaster.internal/ubuntu plucky/main s390x python3-alabaster all 0.7.16-0.1 [18.5 kB] 502s Get:180 http://ftpmaster.internal/ubuntu plucky/main s390x python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 502s Get:181 http://ftpmaster.internal/ubuntu plucky/main s390x python3-sphinx all 8.1.3-4 [474 kB] 503s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinxcontrib.jquery all 4.1-5 [6678 B] 503s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [23.5 kB] 503s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-msmb-theme all 1.2.0-4 [35.4 kB] 503s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-netcdf4 s390x 1.7.2-1build4 [645 kB] 503s Get:186 http://ftpmaster.internal/ubuntu plucky/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 517s Get:187 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pytz all 2025.1-3 [162 kB] 517s Get:188 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2025.1-3 [1866 B] 517s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas-lib s390x 2.2.3+dfsg-8build1 [4995 kB] 523s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas all 2.2.3+dfsg-8build1 [3112 kB] 527s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 527s Get:192 http://ftpmaster.internal/ubuntu plucky/main s390x python3-six all 1.17.0-1 [13.2 kB] 527s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybtex all 0.24.0-4 [70.0 kB] 527s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybtex-docutils all 1.0.2-1 [7176 B] 527s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.5-1 [252 kB] 527s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-seaborn all 0.13.2-4.1 [225 kB] 528s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn-lib s390x 1.4.2+dfsg-7build2 [4269 kB] 533s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn all 1.4.2+dfsg-7build2 [2258 kB] 536s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinx-sitemap all 2.6.0-1 [6674 B] 536s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinxcontrib.bibtex all 2.6.2-1 [25.2 kB] 536s Fetched 208 MB in 4min 14s (818 kB/s) 536s Selecting previously unselected package fonts-lato. 536s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 536s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 536s Unpacking fonts-lato (2.015-1) ... 537s Selecting previously unselected package python3-numpy-dev:s390x. 537s Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-5_s390x.deb ... 537s Unpacking python3-numpy-dev:s390x (1:2.2.3+ds-5) ... 537s Selecting previously unselected package libblas3:s390x. 537s Preparing to unpack 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537s Selecting previously unselected package fonts-dejavu-mono. 537s Preparing to unpack .../014-fonts-dejavu-mono_2.37-8_all.deb ... 537s Unpacking fonts-dejavu-mono (2.37-8) ... 537s Selecting previously unselected package fonts-dejavu-core. 537s Preparing to unpack .../015-fonts-dejavu-core_2.37-8_all.deb ... 537s Unpacking fonts-dejavu-core (2.37-8) ... 537s Selecting previously unselected package libfontenc1:s390x. 537s Preparing to unpack .../016-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 537s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 537s Selecting previously unselected package x11-common. 537s Preparing to unpack .../017-x11-common_1%3a7.7+23ubuntu3_all.deb ... 537s Unpacking x11-common (1:7.7+23ubuntu3) ... 537s Selecting previously unselected package xfonts-encodings. 537s Preparing to unpack .../018-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 537s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 537s Selecting previously unselected package xfonts-utils. 537s 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.../024-libxft2_2.3.6-1build1_s390x.deb ... 537s Unpacking libxft2:s390x (2.3.6-1build1) ... 537s Selecting previously unselected package libxss1:s390x. 537s Preparing to unpack .../025-libxss1_1%3a1.2.3-1build3_s390x.deb ... 537s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 537s Selecting previously unselected package libtk8.6:s390x. 537s Preparing to unpack .../026-libtk8.6_8.6.16-1_s390x.deb ... 537s Unpacking libtk8.6:s390x (8.6.16-1) ... 537s Selecting previously unselected package tk8.6-blt2.5. 537s Preparing to unpack .../027-tk8.6-blt2.5_2.5.3+dfsg-8_s390x.deb ... 537s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 537s Selecting previously unselected package blt. 537s Preparing to unpack .../028-blt_2.5.3+dfsg-8_s390x.deb ... 537s Unpacking blt (2.5.3+dfsg-8) ... 537s Selecting previously unselected package libisl23:s390x. 537s Preparing to unpack .../029-libisl23_0.27-1_s390x.deb ... 537s Unpacking libisl23:s390x (0.27-1) ... 537s Selecting previously unselected package libmpc3:s390x. 537s Preparing to unpack .../030-libmpc3_1.3.1-1build2_s390x.deb ... 537s Unpacking libmpc3:s390x (1.3.1-1build2) ... 537s Selecting previously unselected package cpp-14-s390x-linux-gnu. 537s Preparing to unpack .../031-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 537s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 538s Selecting previously unselected package cpp-14. 538s Preparing to unpack .../032-cpp-14_14.2.0-17ubuntu3_s390x.deb ... 538s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 538s Selecting previously unselected package cpp-s390x-linux-gnu. 538s Preparing to unpack .../033-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 538s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 538s Selecting previously unselected package cpp. 538s Preparing to unpack .../034-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 538s Unpacking cpp (4:14.2.0-1ubuntu1) ... 538s Selecting previously unselected package libcc1-0:s390x. 538s Preparing to unpack .../035-libcc1-0_15-20250222-0ubuntu1_s390x.deb ... 538s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ... 538s Selecting previously unselected package libgomp1:s390x. 538s Preparing to unpack .../036-libgomp1_15-20250222-0ubuntu1_s390x.deb ... 538s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ... 538s Selecting previously unselected package libitm1:s390x. 538s Preparing to unpack .../037-libitm1_15-20250222-0ubuntu1_s390x.deb ... 538s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ... 538s Selecting previously unselected package libasan8:s390x. 538s Preparing to unpack .../038-libasan8_15-20250222-0ubuntu1_s390x.deb ... 538s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ... 538s Selecting previously unselected package libubsan1:s390x. 538s Preparing to unpack .../039-libubsan1_15-20250222-0ubuntu1_s390x.deb ... 538s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ... 538s Selecting previously unselected package libgcc-14-dev:s390x. 538s Preparing to unpack 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unselected package libfile-stripnondeterminism-perl. 538s Preparing to unpack .../056-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 538s Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... 538s Selecting previously unselected package dh-strip-nondeterminism. 538s Preparing to unpack .../057-dh-strip-nondeterminism_1.14.1-2_all.deb ... 538s Unpacking dh-strip-nondeterminism (1.14.1-2) ... 538s Selecting previously unselected package debugedit. 538s Preparing to unpack .../058-debugedit_1%3a5.1-2_s390x.deb ... 538s Unpacking debugedit (1:5.1-2) ... 538s Selecting previously unselected package dwz. 538s Preparing to unpack .../059-dwz_0.15-1build6_s390x.deb ... 538s Unpacking dwz (0.15-1build6) ... 538s Selecting previously unselected package gettext. 538s Preparing to unpack .../060-gettext_0.23.1-1_s390x.deb ... 538s Unpacking gettext (0.23.1-1) ... 538s Selecting previously unselected package intltool-debian. 538s Preparing to unpack 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fonts-font-awesome. 539s Preparing to unpack .../067-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 539s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 539s Selecting previously unselected package fonts-lyx. 539s Preparing to unpack .../068-fonts-lyx_2.4.3-1_all.deb ... 539s Unpacking fonts-lyx (2.4.3-1) ... 539s Selecting previously unselected package fonts-mathjax. 539s Preparing to unpack .../069-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 539s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 539s Selecting previously unselected package libaec0:s390x. 539s Preparing to unpack .../070-libaec0_1.1.3-1_s390x.deb ... 539s Unpacking libaec0:s390x (1.1.3-1) ... 539s Selecting previously unselected package libpixman-1-0:s390x. 539s Preparing to unpack .../071-libpixman-1-0_0.44.0-3_s390x.deb ... 539s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 539s Selecting previously unselected package libxcb-render0:s390x. 539s Preparing to unpack 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(1.3.14-2ubuntu1) ... 539s Selecting previously unselected package libharfbuzz0b:s390x. 539s Preparing to unpack .../078-libharfbuzz0b_10.2.0-1_s390x.deb ... 539s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 539s Selecting previously unselected package libsz2:s390x. 539s Preparing to unpack .../079-libsz2_1.1.3-1_s390x.deb ... 539s Unpacking libsz2:s390x (1.1.3-1) ... 539s Selecting previously unselected package libhdf5-310:s390x. 539s Preparing to unpack .../080-libhdf5-310_1.14.5+repack-3_s390x.deb ... 539s Unpacking libhdf5-310:s390x (1.14.5+repack-3) ... 539s Selecting previously unselected package libhdf5-hl-310:s390x. 539s Preparing to unpack .../081-libhdf5-hl-310_1.14.5+repack-3_s390x.deb ... 539s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-3) ... 539s Selecting previously unselected package libimagequant0:s390x. 539s Preparing to unpack .../082-libimagequant0_2.18.0-1build1_s390x.deb ... 539s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 539s Selecting previously unselected package libjpeg-turbo8:s390x. 539s Preparing to unpack .../083-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 539s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 539s Selecting previously unselected package libjpeg8:s390x. 539s Preparing to unpack .../084-libjpeg8_8c-2ubuntu11_s390x.deb ... 539s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 539s Selecting previously unselected package libjs-jquery. 539s Preparing to unpack .../085-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 539s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 539s Selecting previously unselected package libjs-jquery-ui. 539s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 539s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 539s Selecting previously unselected package libjs-underscore. 539s Preparing to unpack .../087-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 539s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 539s Selecting previously unselected package libjs-sphinxdoc. 539s Preparing to unpack .../088-libjs-sphinxdoc_8.1.3-4_all.deb ... 539s Unpacking libjs-sphinxdoc (8.1.3-4) ... 539s Selecting previously unselected package libjson-perl. 539s Preparing to unpack .../089-libjson-perl_4.10000-1_all.deb ... 539s Unpacking libjson-perl (4.10000-1) ... 539s Selecting previously unselected package liblbfgsb0:s390x. 539s Preparing to unpack .../090-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 539s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 539s Selecting previously unselected package liblcms2-2:s390x. 539s Preparing to unpack .../091-liblcms2-2_2.16-2_s390x.deb ... 539s Unpacking liblcms2-2:s390x (2.16-2) ... 539s Selecting previously unselected package liblzf1:s390x. 539s Preparing to unpack .../092-liblzf1_3.6-4_s390x.deb ... 539s Unpacking liblzf1:s390x (3.6-4) ... 539s Selecting previously unselected package libnetcdf22:s390x. 539s Preparing to unpack .../093-libnetcdf22_1%3a4.9.3-1_s390x.deb ... 539s Unpacking libnetcdf22:s390x (1:4.9.3-1) ... 539s Selecting previously unselected package zlib1g-dev:s390x. 539s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 539s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 539s Selecting previously unselected package libpython3.13-dev:s390x. 539s Preparing to unpack .../095-libpython3.13-dev_3.13.2-2_s390x.deb ... 539s Unpacking libpython3.13-dev:s390x (3.13.2-2) ... 539s Selecting previously unselected package libpython3-dev:s390x. 539s Preparing to unpack .../096-libpython3-dev_3.13.2-2_s390x.deb ... 539s Unpacking libpython3-dev:s390x (3.13.2-2) ... 539s Selecting previously unselected package libpython3-all-dev:s390x. 539s Preparing to unpack .../097-libpython3-all-dev_3.13.2-2_s390x.deb ... 539s Unpacking libpython3-all-dev:s390x (3.13.2-2) ... 539s Selecting previously unselected package libqhull-r8.0:s390x. 539s Preparing to unpack .../098-libqhull-r8.0_2020.2-6build1_s390x.deb ... 539s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 539s Selecting previously unselected package libraqm0:s390x. 539s Preparing to unpack .../099-libraqm0_0.10.2-1_s390x.deb ... 539s Unpacking libraqm0:s390x (0.10.2-1) ... 539s Selecting previously unselected package libsharpyuv0:s390x. 539s Preparing to unpack .../100-libsharpyuv0_1.5.0-0.1_s390x.deb ... 539s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 539s Selecting previously unselected package libjbig0:s390x. 539s Preparing to unpack .../101-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 539s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 539s Selecting previously unselected package libwebp7:s390x. 539s Preparing to unpack .../102-libwebp7_1.5.0-0.1_s390x.deb ... 539s Unpacking libwebp7:s390x (1.5.0-0.1) ... 539s Selecting previously unselected package libtiff6:s390x. 539s Preparing to unpack .../103-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 539s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 539s Selecting previously unselected package libwebpdemux2:s390x. 539s Preparing to unpack .../104-libwebpdemux2_1.5.0-0.1_s390x.deb ... 539s Unpacking libwebpdemux2:s390x (1.5.0-0.1) ... 539s Selecting previously unselected package libwebpmux3:s390x. 539s Preparing to unpack .../105-libwebpmux3_1.5.0-0.1_s390x.deb ... 539s Unpacking libwebpmux3:s390x (1.5.0-0.1) ... 539s Selecting previously unselected package libxslt1.1:s390x. 539s Preparing to unpack .../106-libxslt1.1_1.1.39-0exp1ubuntu2_s390x.deb ... 539s Unpacking libxslt1.1:s390x (1.1.39-0exp1ubuntu2) ... 539s Selecting previously unselected package python3-packaging. 539s Preparing to unpack .../107-python3-packaging_24.2-1_all.deb ... 539s Unpacking python3-packaging (24.2-1) ... 539s Selecting previously unselected package python3-pyproject-hooks. 539s Preparing to unpack .../108-python3-pyproject-hooks_1.2.0-1_all.deb ... 539s Unpacking python3-pyproject-hooks (1.2.0-1) ... 539s Selecting previously unselected package python3-toml. 539s Preparing to unpack .../109-python3-toml_0.10.2-1_all.deb ... 539s Unpacking python3-toml (0.10.2-1) ... 539s Selecting previously unselected package python3-wheel. 539s Preparing to unpack .../110-python3-wheel_0.45.1-1_all.deb ... 539s Unpacking python3-wheel (0.45.1-1) ... 539s Selecting previously unselected package python3-build. 539s Preparing to unpack .../111-python3-build_1.2.2-1_all.deb ... 539s Unpacking python3-build (1.2.2-1) ... 539s Selecting previously unselected package python3-installer. 539s Preparing to unpack .../112-python3-installer_0.7.0+dfsg1-3_all.deb ... 539s Unpacking python3-installer (0.7.0+dfsg1-3) ... 539s Selecting previously unselected package pybuild-plugin-pyproject. 539s Preparing to unpack .../113-pybuild-plugin-pyproject_6.20250308_all.deb ... 539s Unpacking pybuild-plugin-pyproject (6.20250308) ... 539s Selecting previously unselected package python-matplotlib-data. 539s Preparing to unpack .../114-python-matplotlib-data_3.8.3-7build1_all.deb ... 539s Unpacking python-matplotlib-data (3.8.3-7build1) ... 540s Selecting previously unselected package libjs-mathjax. 540s Preparing to unpack .../115-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 540s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 540s Selecting previously unselected package python-mdanalysis-doc. 540s Preparing to unpack .../116-python-mdanalysis-doc_2.8.0-4build1_all.deb ... 540s Unpacking python-mdanalysis-doc (2.8.0-4build1) ... 540s Selecting previously unselected package python3-all. 540s Preparing to unpack .../117-python3-all_3.13.2-2_s390x.deb ... 540s Unpacking python3-all (3.13.2-2) ... 540s Selecting previously unselected package python3.13-dev. 540s Preparing to unpack .../118-python3.13-dev_3.13.2-2_s390x.deb ... 540s Unpacking python3.13-dev (3.13.2-2) ... 540s Selecting previously unselected package python3-dev. 540s Preparing to unpack .../119-python3-dev_3.13.2-2_s390x.deb ... 540s Unpacking python3-dev (3.13.2-2) ... 540s Selecting previously unselected package python3-all-dev. 540s Preparing to unpack .../120-python3-all-dev_3.13.2-2_s390x.deb ... 540s Unpacking python3-all-dev (3.13.2-2) ... 540s Selecting previously unselected package python3.12-tk. 540s Preparing to unpack .../121-python3.12-tk_3.12.9-1_s390x.deb ... 540s Unpacking python3.12-tk (3.12.9-1) ... 540s Selecting previously unselected package python3.13-tk. 540s Preparing to unpack .../122-python3.13-tk_3.13.2-2_s390x.deb ... 540s Unpacking python3.13-tk (3.13.2-2) ... 540s Selecting previously unselected package python3-tk:s390x. 540s Preparing to unpack .../123-python3-tk_3.13.1-1_s390x.deb ... 540s Unpacking python3-tk:s390x (3.13.1-1) ... 540s Selecting previously unselected package python3-pil.imagetk:s390x. 540s Preparing to unpack .../124-python3-pil.imagetk_11.1.0-5build1_s390x.deb ... 540s Unpacking python3-pil.imagetk:s390x (11.1.0-5build1) ... 540s Selecting previously unselected package libopenjp2-7:s390x. 540s Preparing to unpack .../125-libopenjp2-7_2.5.3-2_s390x.deb ... 540s Unpacking libopenjp2-7:s390x (2.5.3-2) ... 540s Selecting previously unselected package python3-pil:s390x. 540s Preparing to unpack .../126-python3-pil_11.1.0-5build1_s390x.deb ... 540s Unpacking python3-pil:s390x (11.1.0-5build1) ... 540s Selecting previously unselected package python3-cairo. 540s Preparing to unpack .../127-python3-cairo_1.26.1-2build2_s390x.deb ... 540s Unpacking python3-cairo (1.26.1-2build2) ... 540s Selecting previously unselected package python3-freetype. 540s Preparing to unpack .../128-python3-freetype_2.5.1-1_all.deb ... 540s Unpacking python3-freetype (2.5.1-1) ... 540s Selecting previously unselected package python3-rlpycairo. 540s Preparing to unpack .../129-python3-rlpycairo_0.3.0-3_all.deb ... 540s Unpacking python3-rlpycairo (0.3.0-3) ... 540s Selecting previously unselected package python3-reportlab. 540s Preparing to unpack .../130-python3-reportlab_4.3.1-1_all.deb ... 540s Unpacking python3-reportlab (4.3.1-1) ... 540s Selecting previously unselected package w3c-sgml-lib. 540s Preparing to unpack .../131-w3c-sgml-lib_1.3-3_all.deb ... 540s Unpacking w3c-sgml-lib (1.3-3) ... 540s Selecting previously unselected package python3-biopython. 540s Preparing to unpack .../132-python3-biopython_1.85+dfsg-2build1_s390x.deb ... 540s Unpacking python3-biopython (1.85+dfsg-2build1) ... 540s Selecting previously unselected package python3-brotli. 540s Preparing to unpack .../133-python3-brotli_1.1.0-2build4_s390x.deb ... 540s Unpacking python3-brotli (1.1.0-2build4) ... 540s Selecting previously unselected package python3-cftime. 540s Preparing to unpack .../134-python3-cftime_1.6.4-2_s390x.deb ... 540s Unpacking python3-cftime (1.6.4-2) ... 540s Selecting previously unselected package python3-lxml:s390x. 540s Preparing to unpack .../135-python3-lxml_5.3.1-1build1_s390x.deb ... 540s Unpacking python3-lxml:s390x (5.3.1-1build1) ... 540s Selecting previously unselected package python3-citeproc. 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python3-defusedxml (0.7.1-3) ... 540s Selecting previously unselected package python3-roman. 540s Preparing to unpack .../142-python3-roman_5.0-1_all.deb ... 540s Unpacking python3-roman (5.0-1) ... 540s Selecting previously unselected package python3-docutils. 540s Preparing to unpack .../143-python3-docutils_0.21.2+dfsg-2_all.deb ... 540s Unpacking python3-docutils (0.21.2+dfsg-2) ... 540s Selecting previously unselected package python3-looseversion. 540s Preparing to unpack .../144-python3-looseversion_1.3.0-3_all.deb ... 540s Unpacking python3-looseversion (1.3.0-3) ... 540s Selecting previously unselected package python3-duecredit. 541s Preparing to unpack .../145-python3-duecredit_0.10.2-2_all.deb ... 541s Unpacking python3-duecredit (0.10.2-2) ... 541s Selecting previously unselected package python3-monotonic. 541s Preparing to unpack .../146-python3-monotonic_1.6-3_all.deb ... 541s Unpacking python3-monotonic (1.6-3) ... 541s Selecting previously unselected package python3-fasteners. 541s Preparing to unpack .../147-python3-fasteners_0.18-2_all.deb ... 541s Unpacking python3-fasteners (0.18-2) ... 541s Selecting previously unselected package python3-platformdirs. 541s Preparing to unpack .../148-python3-platformdirs_4.3.6-1_all.deb ... 541s Unpacking python3-platformdirs (4.3.6-1) ... 541s Selecting previously unselected package python3-fs. 541s Preparing to unpack .../149-python3-fs_2.4.16-7_all.deb ... 541s Unpacking python3-fs (2.4.16-7) ... 541s Selecting previously unselected package python3-lz4. 541s Preparing to unpack .../150-python3-lz4_4.4.0+dfsg-1build1_s390x.deb ... 541s Unpacking python3-lz4 (4.4.0+dfsg-1build1) ... 541s Selecting previously unselected package python3-scipy. 541s Preparing to unpack .../151-python3-scipy_1.14.1-4ubuntu2_s390x.deb ... 541s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 541s Selecting previously unselected package python3-mpmath. 541s Preparing to unpack .../152-python3-mpmath_1.3.0-1_all.deb ... 541s 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previously unselected package sphinx-rtd-theme-common. 541s Preparing to unpack .../158-sphinx-rtd-theme-common_3.0.2+dfsg-2_all.deb ... 541s Unpacking sphinx-rtd-theme-common (3.0.2+dfsg-2) ... 541s Selecting previously unselected package python3-mrcfile. 541s Preparing to unpack .../159-python3-mrcfile_1.5.4-2_all.deb ... 541s Unpacking python3-mrcfile (1.5.4-2) ... 541s Selecting previously unselected package python3-griddataformats. 541s Preparing to unpack .../160-python3-griddataformats_1.0.2-2_all.deb ... 541s Unpacking python3-griddataformats (1.0.2-2) ... 541s Selecting previously unselected package python3-h5py-serial. 541s Preparing to unpack .../161-python3-h5py-serial_3.13.0-1_s390x.deb ... 541s Unpacking python3-h5py-serial (3.13.0-1) ... 541s Selecting previously unselected package python3-h5py. 541s Preparing to unpack .../162-python3-h5py_3.13.0-1_all.deb ... 541s Unpacking python3-h5py (3.13.0-1) ... 541s Selecting previously unselected package python3-sortedcontainers. 541s Preparing to unpack .../163-python3-sortedcontainers_2.4.0-2_all.deb ... 541s Unpacking python3-sortedcontainers (2.4.0-2) ... 541s Selecting previously unselected package python3-hypothesis. 541s Preparing to unpack .../164-python3-hypothesis_6.127.4-1_all.deb ... 541s Unpacking python3-hypothesis (6.127.4-1) ... 541s Selecting previously unselected package python3-imagesize. 541s Preparing to unpack .../165-python3-imagesize_1.4.1-1_all.deb ... 541s Unpacking python3-imagesize (1.4.1-1) ... 541s Selecting previously unselected package python3-iniconfig. 541s Preparing to unpack .../166-python3-iniconfig_1.1.1-2_all.deb ... 541s Unpacking python3-iniconfig (1.1.1-2) ... 541s Selecting previously unselected package python3-joblib. 541s Preparing to unpack .../167-python3-joblib_1.4.2-3_all.deb ... 541s Unpacking python3-joblib (1.4.2-3) ... 542s Selecting previously unselected package python3-kiwisolver. 542s Preparing to unpack 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Unpacking python3-mmtf (1.1.3-1) ... 542s Selecting previously unselected package python3-threadpoolctl. 542s Preparing to unpack .../174-python3-threadpoolctl_3.1.0-1_all.deb ... 542s Unpacking python3-threadpoolctl (3.1.0-1) ... 542s Selecting previously unselected package python3-tqdm. 542s Preparing to unpack .../175-python3-tqdm_4.67.1-2_all.deb ... 542s Unpacking python3-tqdm (4.67.1-2) ... 542s Selecting previously unselected package python3-mdanalysis. 542s Preparing to unpack .../176-python3-mdanalysis_2.8.0-4build1_s390x.deb ... 542s Unpacking python3-mdanalysis (2.8.0-4build1) ... 542s Selecting previously unselected package sphinx-common. 542s Preparing to unpack .../177-sphinx-common_8.1.3-4_all.deb ... 542s Unpacking sphinx-common (8.1.3-4) ... 542s Selecting previously unselected package python3-alabaster. 542s Preparing to unpack .../178-python3-alabaster_0.7.16-0.1_all.deb ... 542s Unpacking python3-alabaster (0.7.16-0.1) ... 542s Selecting previously unselected package python3-snowballstemmer. 542s Preparing to unpack .../179-python3-snowballstemmer_2.2.0-4build1_all.deb ... 542s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 542s Selecting previously unselected package python3-sphinx. 542s Preparing to unpack .../180-python3-sphinx_8.1.3-4_all.deb ... 542s Unpacking python3-sphinx (8.1.3-4) ... 542s Selecting previously unselected package python3-sphinxcontrib.jquery. 542s Preparing to unpack .../181-python3-sphinxcontrib.jquery_4.1-5_all.deb ... 542s Unpacking python3-sphinxcontrib.jquery (4.1-5) ... 542s Selecting previously unselected package python3-sphinx-rtd-theme. 542s Preparing to unpack .../182-python3-sphinx-rtd-theme_3.0.2+dfsg-2_all.deb ... 542s Unpacking python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 542s Selecting previously unselected package python3-msmb-theme. 542s Preparing to unpack .../183-python3-msmb-theme_1.2.0-4_all.deb ... 542s Unpacking python3-msmb-theme (1.2.0-4) ... 542s Selecting previously unselected package python3-netcdf4. 542s Preparing to unpack .../184-python3-netcdf4_1.7.2-1build4_s390x.deb ... 542s Unpacking python3-netcdf4 (1.7.2-1build4) ... 542s Selecting previously unselected package python3-networkx. 542s Preparing to unpack .../185-python3-networkx_3.2.1-4ubuntu1_all.deb ... 542s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 542s Selecting previously unselected package python3-pytz. 542s Preparing to unpack .../186-python3-pytz_2025.1-3_all.deb ... 542s Unpacking python3-pytz (2025.1-3) ... 543s Selecting previously unselected package python3-tz. 543s Preparing to unpack .../187-python3-tz_2025.1-3_all.deb ... 543s Unpacking python3-tz (2025.1-3) ... 543s Selecting previously unselected package python3-pandas-lib:s390x. 543s Preparing to unpack .../188-python3-pandas-lib_2.2.3+dfsg-8build1_s390x.deb ... 543s Unpacking python3-pandas-lib:s390x (2.2.3+dfsg-8build1) ... 543s Selecting previously unselected package python3-pandas. 543s Preparing to unpack .../189-python3-pandas_2.2.3+dfsg-8build1_all.deb ... 543s Unpacking python3-pandas (2.2.3+dfsg-8build1) ... 543s Selecting previously unselected package python3-pluggy. 543s Preparing to unpack .../190-python3-pluggy_1.5.0-1_all.deb ... 543s Unpacking python3-pluggy (1.5.0-1) ... 543s Selecting previously unselected package python3-six. 543s Preparing to unpack .../191-python3-six_1.17.0-1_all.deb ... 543s Unpacking python3-six (1.17.0-1) ... 543s Selecting previously unselected package python3-pybtex. 543s Preparing to unpack .../192-python3-pybtex_0.24.0-4_all.deb ... 543s Unpacking python3-pybtex (0.24.0-4) ... 543s Selecting previously unselected package python3-pybtex-docutils. 543s Preparing to unpack .../193-python3-pybtex-docutils_1.0.2-1_all.deb ... 543s Unpacking python3-pybtex-docutils (1.0.2-1) ... 543s Selecting previously unselected package python3-pytest. 543s Preparing to unpack .../194-python3-pytest_8.3.5-1_all.deb ... 543s Unpacking python3-pytest (8.3.5-1) ... 543s 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(2.6.2-1) ... 543s Setting up dh-python (6.20250308) ... 543s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 543s Setting up liblcms2-2:s390x (2.16-2) ... 543s Setting up python3-iniconfig (1.1.1-2) ... 543s Setting up libpixman-1-0:s390x (0.44.0-3) ... 543s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 543s Setting up fonts-lato (2.015-1) ... 543s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 543s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 543s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 543s Setting up python3-joblib (1.4.2-3) ... 543s Setting up python3-lz4 (4.4.0+dfsg-1build1) ... 543s Setting up libxcb-render0:s390x (1.17.0-2) ... 543s Setting up python3-defusedxml (0.7.1-3) ... 544s Setting up libarchive-zip-perl (1.68-1) ... 544s Setting up python3-alabaster (0.7.16-0.1) ... 544s Setting up python3-unicodedata2 (15.1.0+ds-1build3) ... 544s Setting up fonts-lyx (2.4.3-1) ... 544s Setting up libdebhelper-perl (13.24.1ubuntu2) ... 544s Setting up python3-tqdm 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up libcc1-0:s390x (15-20250222-0ubuntu1) ... 548s Setting up libsz2:s390x (1.1.3-1) ... 548s Setting up libitm1:s390x (15-20250222-0ubuntu1) ... 548s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 548s Setting up python3-imagesize (1.4.1-1) ... 548s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 548s Setting up automake (1:1.17-3ubuntu1) ... 548s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 548s Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 548s Setting up python3-sympy (1.13.3-5) ... 553s Setting up liblapack3:s390x (3.12.1-2) ... 553s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 553s Setting up gettext (0.23.1-1) ... 553s Setting up pybuild-plugin-pyproject (6.20250308) ... 553s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 553s Setting up python3-pytest (8.3.5-1) ... 553s Setting up libwebpdemux2:s390x (1.5.0-0.1) ... 553s Setting up python3-hypothesis (6.127.4-1) ... 554s Setting up python3-freetype (2.5.1-1) ... 554s Setting up xfonts-utils (1:7.7+7) ... 554s Setting up intltool-debian (0.35.0+20060710.6) ... 554s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 554s Setting up libraqm0:s390x (0.10.2-1) ... 554s Setting up libpython3.13-dev:s390x (3.13.2-2) ... 554s Setting up python3-numpy (1:2.2.3+ds-5) ... 555s Setting up libjs-sphinxdoc (8.1.3-4) ... 555s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 555s Setting up cpp-14 (14.2.0-17ubuntu3) ... 555s Setting up dh-strip-nondeterminism (1.14.1-2) ... 555s Setting up libhdf5-310:s390x (1.14.5+repack-3) ... 555s Setting up python3-lxml:s390x (5.3.1-1build1) ... 555s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 555s Setting up xml-core (0.19) ... 555s Setting up python3-contourpy (1.3.1-1build1) ... 555s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ... 555s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ... 555s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ... 555s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 555s Setting up python3-mrcfile (1.5.4-2) ... 555s Setting up libhdf5-hl-310:s390x (1.14.5+repack-3) ... 555s Setting up libxft2:s390x (2.3.6-1build1) ... 555s Setting up python3-scipy (1.14.1-4ubuntu2) ... 558s Setting up libpython3-dev:s390x (3.13.2-2) ... 558s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 558s Setting up python3-citeproc (0.6.0-3) ... 558s Setting up python3.13-dev (3.13.2-2) ... 558s Setting up po-debconf (1.0.21+nmu1) ... 558s Setting up libtk8.6:s390x (8.6.16-1) ... 558s Setting up python3-pandas-lib:s390x (2.2.3+dfsg-8build1) ... 558s Setting up python3.12-tk (3.12.9-1) ... 558s Setting up libnetcdf22:s390x (1:4.9.3-1) ... 558s Setting up python3-sklearn-lib:s390x (1.4.2+dfsg-7build2) ... 558s Setting up python3-h5py-serial (3.13.0-1) ... 558s Setting up python3-mmtf (1.1.3-1) ... 558s Setting up fonts-urw-base35 (20200910-8) ... 558s Setting up libcairo2:s390x (1.18.2-2) ... 558s Setting up python3.13-tk (3.13.2-2) ... 558s Setting up python-mdanalysis-doc (2.8.0-4build1) ... 558s Setting up python3-pil:s390x (11.1.0-5build1) ... 559s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 559s Setting up python3-griddataformats (1.0.2-2) ... 559s Setting up python3-pandas (2.2.3+dfsg-8build1) ... 562s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 562s Setting up libpython3-all-dev:s390x (3.13.2-2) ... 562s Setting up sphinx-common (8.1.3-4) ... 562s Setting up python3-dev (3.13.2-2) ... 562s Setting up python3-h5py (3.13.0-1) ... 562s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 562s Setting up python3-sklearn (1.4.2+dfsg-7build2) ... 563s Setting up python3-cftime (1.6.4-2) ... 564s Setting up cpp (4:14.2.0-1ubuntu1) ... 564s Setting up python3-netcdf4 (1.7.2-1build4) ... 564s Setting up python3-all-dev (3.13.2-2) ... 564s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 564s Setting up python3-cairo (1.26.1-2build2) ... 564s Setting up python3-duecredit (0.10.2-2) ... 564s Setting up blt (2.5.3+dfsg-8) ... 564s Setting up python3-tk:s390x (3.13.1-1) ... 564s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 564s Setting up gcc-14 (14.2.0-17ubuntu3) ... 564s Setting up python3-pil.imagetk:s390x (11.1.0-5build1) ... 564s Setting up python3-rlpycairo (0.3.0-3) ... 564s Setting up python3-reportlab (4.3.1-1) ... 564s Setting up g++-14 (14.2.0-17ubuntu3) ... 564s Setting up libtool (2.5.4-4) ... 564s Setting up gcc (4:14.2.0-1ubuntu1) ... 565s Setting up dh-autoreconf (20) ... 565s Setting up g++ (4:14.2.0-1ubuntu1) ... 565s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 565s Setting up build-essential (12.10ubuntu1) ... 565s Setting up debhelper (13.24.1ubuntu2) ... 565s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 565s Setting up python3-fonttools (4.55.3-2build1) ... 565s Setting up python3-matplotlib (3.8.3-7build1) ... 566s Setting up python3-seaborn (0.13.2-4.1) ... 566s Processing triggers for man-db (2.13.0-1) ... 568s Processing triggers for install-info (7.1.1-1) ... 568s Processing triggers for libc-bin (2.41-1ubuntu2) ... 568s Processing triggers for sgml-base (1.31) ... 568s Setting up docutils-common (0.21.2+dfsg-2) ... 568s Setting up w3c-sgml-lib (1.3-3) ... 588s Setting up python3-biopython (1.85+dfsg-2build1) ... 589s Setting up python3-mdanalysis (2.8.0-4build1) ... 589s Processing triggers for sgml-base (1.31) ... 589s Setting up python3-docutils (0.21.2+dfsg-2) ... 589s Setting up python3-pybtex-docutils (1.0.2-1) ... 589s Setting up python3-sphinx (8.1.3-4) ... 590s Setting up python3-sphinxcontrib.bibtex (2.6.2-1) ... 590s Setting up python3-sphinx-sitemap (2.6.0-1) ... 590s Setting up python3-sphinxcontrib.jquery (4.1-5) ... 590s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 590s Setting up python3-msmb-theme (1.2.0-4) ... 592s autopkgtest [15:40:36]: test test-mdanalysis: [----------------------- 592s skipping tests with SKIP_TEST_LIST=test_all_import[.analysis.hole2] journal.pcbi.1004568 test_start_stop_step test_count_by_time test_rmsd test_mass_weighted test_custom_weighted test_ref_mobile_mass_mismapped test_time test_dt test_total_time test_iter test_last_frame test_frame_jump test_next_gives_second_frame test_set_time test_write_istart test_write_trajectory_atomgroup test_write_trajectory_universe test_Timestep_time test_rename_aux test_namdbin ref_reader25 ref_reader_extra_args25 593s ============================= test session starts ============================== 593s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 593s cachedir: .pytest_cache 593s hypothesis profile 'default' -> database=DirectoryBasedExampleDatabase(PosixPath('/tmp/autopkgtest.cKrTAu/build.zms/src/.hypothesis/examples')) 593s rootdir: /tmp/autopkgtest.cKrTAu/build.zms/src 593s plugins: hypothesis-6.127.4, typeguard-4.4.2 600s collecting ... collected 19667 items / 836 deselected / 6 skipped / 18831 selected 600s 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_rotation_matrix_input[a0-b0-None-0.15785647734415692] PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_rotation_matrix_input[a1-b1-weights1-0.13424643502242328] PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_list_args PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestRotationMatrix::test_exception PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_match[True] PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_match[False] PASSED [ 0%] 600s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_nomatch_atoms_raise[True] PASSED [ 0%] 601s 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name CA-expectation0] PASSED [ 0%] 602s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_subselection_alignto[subselection1-expectation1] PASSED [ 0%] 602s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_subselection_alignto[1234-expectation2] PASSED [ 0%] 602s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_no_atom_masses PASSED [ 0%] 602s testsuite/MDAnalysisTests/analysis/test_align.py::TestGetMatchingAtoms::test_one_universe_has_masses PASSED [ 0%] 602s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_outfile_default PASSED [ 0%] 603s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_outfile_default_exists PASSED [ 0%] 603s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_step_works PASSED [ 0%] 603s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlign::test_AlignTraj_deprecated_attribute PASSED [ 0%] 603s 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testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_deprecated_attrs PASSED [ 0%] 606s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure PASSED [ 0%] 607s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_mass_weighted PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_select PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_no_ref PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_no_msf PASSED [ 0%] 608s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_mismatch_atoms PASSED [ 0%] 609s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_ref_frame PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAverageStructure::test_average_structure_in_memory PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_importerror_biopython SKIPPED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_aligned PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_file SKIPPED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_ClustalW SKIPPED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestAlignmentProcessing::test_fasta2select_resids PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_biopython_import_error SKIPPED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_sequence_alignment PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::TestSequenceAlignmentFunction::test_sequence_alignment_deprecation PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_align.py::test_alignto_reorder_atomgroups PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_exceptions PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_pairwise_dist PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_atomicdistances.py::TestAtomicDistances::test_ad_pairwise_dist_pbc PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendBase--1] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendSerial-None] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendMultiprocessing-string] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_fails_incorrect_n_workers[BackendDask-n_workers3] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[square-iterable0-answer0] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[square-iterable1-answer1] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[noop-iterable2-answer2] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_all_backends_give_correct_results[upper-asdf-answer3] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_get_warnings[BackendSerial-params0-n_workers is ignored when executing with backend='serial'] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_backends.py::Test_Backends::test_get_errors[BackendDask-params0-module 'dask' is missing. Please install 'dask': https://docs.dask.org/en/stable/install.html] PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_base.py::test_incompatible_n_workers PASSED [ 0%] 610s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[Parallelizable-not-existing-backend-2] PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[Parallelizable-not-existing-backend-None] PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-not-existing-backend-2] PASSED [ 0%] 611s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-not-existing-backend-None] PASSED [ 0%] 612s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-multiprocessing-2] PASSED [ 0%] 612s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[SerialOnly-dask-None] PASSED [ 0%] 612s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[ParallelizableWithDaskOnly-multiprocessing-None] PASSED [ 0%] 613s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_fails[ParallelizableWithDaskOnly-multiprocessing-2] PASSED [ 0%] 613s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_works_when_unsupported_backend[Parallelizable-CustomSerialBackend-2] PASSED [ 0%] 613s testsuite/MDAnalysisTests/analysis/test_base.py::test_backend_configuration_works_when_unsupported_backend[ParallelizableWithDaskOnly-CustomSerialBackend-2] PASSED [ 0%] 614s testsuite/MDAnalysisTests/analysis/test_base.py::test_custom_backend_works[Parallelizable-CustomSerialBackend-1] PASSED [ 0%] 614s testsuite/MDAnalysisTests/analysis/test_base.py::test_custom_backend_works[ParallelizableWithDaskOnly-CustomSerialBackend-1] PASSED [ 0%] 614s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[Parallelizable-map-1] PASSED [ 0%] 615s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[SerialOnly-list-1] PASSED [ 0%] 615s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_incorrect_custom_backend[ParallelizableWithDaskOnly-object-1] PASSED [ 0%] 616s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-CustomSerialBackend-1] PASSED [ 0%] 616s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-multiprocessing-1] PASSED [ 0%] 616s testsuite/MDAnalysisTests/analysis/test_base.py::test_fails_for_unparallelizable[SerialOnly-dask-1] PASSED [ 0%] 616s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs0-frames0] PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs1-frames1] PASSED [ 0%] 617s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs2-frames2] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs3-frames3] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis0-run_kwargs4-frames4] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs0] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs1] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs2] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs3] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs4] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs5] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis0-run_kwargs6] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_bool_fail[client_FrameAnalysis0] PASSED [ 0%] 618s testsuite/MDAnalysisTests/analysis/test_base.py::test_rewind[client_FrameAnalysis0] PASSED [ 0%] 619s testsuite/MDAnalysisTests/analysis/test_base.py::test_frames_times[client_FrameAnalysis0] PASSED [ 0%] 619s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs0-frames0] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs1-frames1] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs2-frames2] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs3-frames3] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice_parallel[client_FrameAnalysis1-run_kwargs4-frames4] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs0] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs1] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs2] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs3] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs4] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs5] PASSED [ 0%] 620s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_fail[client_FrameAnalysis1-run_kwargs6] PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_bool_fail[client_FrameAnalysis1] PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_base.py::test_rewind[client_FrameAnalysis1] PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_base.py::test_frames_times[client_FrameAnalysis1] PASSED [ 0%] 621s testsuite/MDAnalysisTests/analysis/test_base.py::test_reset_n_parts_to_n_frames PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs0-frames0] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs1-frames1] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs2-frames2] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs3-frames3] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_frame_slice[run_kwargs4-frames4] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_parallelizable_transformations PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_instance_serial_backend PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_warn_nparts_nworkers PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[AnalysisBase-False] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[AnalysisFromFunction-True] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_not_parallelizable[FrameAnalysis-True] PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar_run PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_verbose_progressbar_run_with_kwargs PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_progressbar_multiprocessing PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_incomplete_defined_analysis PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_old_api PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_filter_baseanalysis_kwargs_VE PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_filter_baseanalysis_kwargs PASSED [ 0%] 622s testsuite/MDAnalysisTests/analysis/test_base.py::test_results_type PASSED [ 0%] 623s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-None-None-2-49] PASSED [ 0%] 625s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-None-50-2-25] PASSED [ 0%] 626s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-20-50-2-15] PASSED [ 0%] 628s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction0-20-50-None-30] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction_args_content[client_AnalysisFromFunction0] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-None-None-2-49] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-None-50-2-25] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-20-50-2-15] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction[client_AnalysisFromFunction1-20-50-None-30] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_AnalysisFromFunction_args_content[client_AnalysisFromFunction1] PASSED [ 0%] 629s testsuite/MDAnalysisTests/analysis/test_base.py::test_analysis_class[client_AnalysisFromFunctionAnalysisClass0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_base.py::test_analysis_class_decorator PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_root_selection PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_number_of_frames[client_BAT0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates[client_BAT0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates_single_frame[client_BAT0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_reconstruction[client_BAT0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_IO[client_BAT0] PASSED [ 0%] 630s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_incorrect_dims[client_BAT0] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_Cartesian_does_not_modify_input[client_BAT0] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_number_of_frames[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_coordinates_single_frame[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_reconstruction[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_IO[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_incorrect_dims[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_Cartesian_does_not_modify_input[client_BAT1] PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_nobonds PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_bad_initial_atom PASSED [ 0%] 631s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_disconnected_atom_group PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_bat.py::TestBAT::test_bat_multifragments_atomgroup PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q_folded PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_soft_cut_q_unfolded PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r0-2-1] PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r1-1-0] PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r2-1-0.5] PASSED [ 0%] 632s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r3-cutoff3-1] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_hard_cut_q[r4-cutoff4-0] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r0-None-2-1] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r1-None-1-0] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_radius_cut_q[r2-None-1-0.5] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_contact_matrix PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_new_selection PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_valid_types[(resname ASP GLU) and (name OE* OD*)] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_valid_types[(resname ARG LYS) and (name NH* NZ)] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_contacts_selections PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[1] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[ag1] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[Universe] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_select_wrong_types[USE UPDATING AG] PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_startframe PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_end_zero PASSED [ 0%] 633s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_slicing PASSED [ 0%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_villin_folded PASSED [ 1%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_villin_unfolded PASSED [ 1%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_hard_cut_method PASSED [ 1%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_radius_cut_method PASSED [ 1%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_own_method PASSED [ 1%] 634s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_own_method_no_array_cast PASSED [ 1%] 635s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_non_callable_method PASSED [ 1%] 635s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_distance_box[True-expected0] PASSED [ 1%] 635s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_distance_box[False-expected1] PASSED [ 1%] 635s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_warn_deprecated_attr PASSED [ 1%] 635s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_n_initial_contacts[datafiles0-0] PASSED [ 1%] 648s testsuite/MDAnalysisTests/analysis/test_contacts.py::TestContacts::test_n_initial_contacts[datafiles1-41814] PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_contacts.py::test_q1q2 PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_data.py::test_all_exports PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_shape PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_edges PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_midpoints PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_delta PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_grid PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_origin PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_keyerror PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_attributeError PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_unit_nolength PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_density_none PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_set_density_not_in_units PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_parameters_isdensity PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_grid_not_density PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_value_error PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_units_same_density_units PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_units_density PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_convert_length_same_length_units PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_convert_length_other_length_units PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_repr PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_length_edges PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_check_convert_density_edges PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[float] PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[double] PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[int] PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensity::test_export_types[byte] PASSED [ 1%] 649s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_run[static] PASSED [ 1%] 650s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_run[dynamic] PASSED [ 1%] 650s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_sliced PASSED [ 1%] 651s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_eqbox PASSED [ 1%] 651s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_neqbox PASSED [ 1%] 651s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_userdefn_boxshape PASSED [ 1%] 651s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_userdefn_padding PASSED [ 1%] 652s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_userdefn_smallgrid PASSED [ 1%] 652s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_shape PASSED [ 1%] 652s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_type PASSED [ 1%] 653s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_gridcenter_missing PASSED [ 1%] 653s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_xdim_type PASSED [ 1%] 653s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_userdefn_xdim_nanvalue PASSED [ 1%] 653s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_noatomgroup PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_ValueError_noatomgroup PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_density.py::TestDensityAnalysis::test_warn_results_deprecated PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_density.py::TestGridImport::test_absence_griddata PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_density.py::TestGridImport::test_presence_griddata PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_broken_molecules PASSED [ 1%] 654s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_broken_repaired_molecules PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_temperature PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_non_charges PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_non_neutral PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_dielectric.py::TestDielectric::test_free_charges PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_eg PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_dist_weights PASSED [ 1%] 655s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_dist_weights_frames PASSED [ 1%] 656s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_distvalues_ag_universe PASSED [ 1%] 656s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_distvalues_ag_select PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_different_steps PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_transform PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_long_traj PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_updating_atomgroup PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_not_universe_atomgroup_error PASSED [ 1%] 657s testsuite/MDAnalysisTests/analysis/test_diffusionmap.py::test_DistanceMatrix_attr_warning PASSED [ 1%] 658s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral[client_Dihedral0] PASSED [ 1%] 658s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_single_frame[client_Dihedral0] PASSED [ 1%] 658s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_atomgroup_list[client_Dihedral0] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_enough_atoms[client_Dihedral0] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_attr_warning[client_Dihedral0] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral[client_Dihedral1] PASSED [ 1%] 659s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_single_frame[client_Dihedral1] PASSED [ 1%] 660s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_atomgroup_list[client_Dihedral1] PASSED [ 1%] 660s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_enough_atoms[client_Dihedral1] PASSED [ 1%] 660s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestDihedral::test_dihedral_attr_warning[client_Dihedral1] PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran[client_Ramachandran0] PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_single_frame[client_Ramachandran0] PASSED [ 1%] 661s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_residue_selections[client_Ramachandran0] PASSED [ 1%] 662s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_length[client_Ramachandran0] PASSED [ 1%] 662s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_unchecked[client_Ramachandran0] PASSED [ 1%] 662s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran[client_Ramachandran1] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_single_frame[client_Ramachandran1] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_residue_selections[client_Ramachandran1] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_length[client_Ramachandran1] PASSED [ 1%] 663s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_outside_protein_unchecked[client_Ramachandran1] PASSED [ 1%] 664s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_protein_ends PASSED [ 1%] 664s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_None_removal PASSED [ 1%] 664s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_plot PASSED [ 1%] 664s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestRamachandran::test_ramachandran_attr_warning PASSED [ 1%] 665s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin[client_Janin0] PASSED [ 1%] 665s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_tpr[client_Janin0] PASSED [ 1%] 666s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_residue_selections[client_Janin0] PASSED [ 1%] 666s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin[client_Janin1] PASSED [ 1%] 666s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_tpr[client_Janin1] PASSED [ 1%] 666s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_residue_selections[client_Janin1] PASSED [ 1%] 667s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_single_frame PASSED [ 1%] 667s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_outside_protein_length PASSED [ 1%] 667s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_remove_residues PASSED [ 1%] 667s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_atom_selection PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_plot PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::TestJanin::test_janin_attr_warning PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Dihedral-True] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Ramachandran-True] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_class_is_parallelizable[Janin-True] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Dihedral-backends0] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Ramachandran-backends1] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_dihedrals.py::test_supported_backends[Janin-backends2] PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_np PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_sparse PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_box_numpy PASSED [ 1%] 668s testsuite/MDAnalysisTests/analysis/test_distances.py::TestContactMatrix::test_box_sparse PASSED [ 1%] 669s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist PASSED [ 1%] 669s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist_box PASSED [ 1%] 670s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_pairwise_dist_offset_effect PASSED [ 1%] 670s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_offset_calculation PASSED [ 1%] 671s testsuite/MDAnalysisTests/analysis/test_distances.py::TestDist::test_mismatch_exception PASSED [ 1%] 671s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_simple_case_indices_only PASSED [ 1%] 672s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_return_type[5.9] PASSED [ 1%] 672s testsuite/MDAnalysisTests/analysis/test_distances.py::TestBetween::test_between_return_type[0.0] PASSED [ 1%] 672s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] PASSED [ 1%] 672s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1eteA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1i8nA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1h4aX.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] PASSED [ 1%] 673s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1pdoA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1lpbA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1ahsA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] PASSED [ 1%] 674s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1dx5I.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] PASSED [ 1%] 675s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1or4A.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] PASSED [ 1%] 676s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1bvyF.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1v7mV.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1mr1D.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] PASSED [ 1%] 677s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP0] PASSED [ 1%] 679s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP0] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP0] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3fhkA.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3on9A.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2qdlA.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1y1lA.pdb.gz] PASSED [ 1%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2cayA.pdb.gz] PASSED [ 2%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gfsA.pdb.gz] PASSED [ 2%] 680s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1eteA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1i8nA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1h4aX.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3hklA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2gu3A.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3k7pA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1pdoA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2a2lA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3l4rA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gwiA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1lpbA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3lqcA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1ahsA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nbkA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/4dkcA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ejfA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1dx5I.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3e8mA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xcjA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/4gcnA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3pivA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3vjzA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1or4A.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2cviA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3aqgA.pdb.gz] PASSED [ 2%] 681s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2fvvA.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2va0A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3so6A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xr6A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nngA.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ieyB.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ny7A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3gknA.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2j49A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3t5gB.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1bvyF.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3ii2A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1v7mV.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1mr1D.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2i39A.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3q4oA.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3a4rA.pdb.gz] PASSED [ 2%] 682s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_file_guess_hydrogens[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/3nzmA.pdb.gz] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory[client_DSSP1] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_atomgroup[client_DSSP1] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_hydrogens[client_DSSP1] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_without_hydrogen_fails[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/2xdgA.pdb.gz] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_trajectory_with_uneven_number_of_atoms_fails[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/1mr1D_failing.pdb.gz] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_dssp.py::test_exception_raises_with_atom_index[client_DSSP1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dssp/wrong_hydrogens.pdb.gz] PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_encore.py::test_moved_to_mdakit_warning PASSED [ 2%] 684s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_triangular_matrix PASSED [ 2%] 685s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_parallel_calculation PASSED [ 2%] 685s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition PASSED [ 2%] 685s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ensemble_superimposition_to_reference_non_weighted PASSED [ 2%] 685s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix PASSED [ 2%] 685s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_covariance_matrix_with_reference PASSED [ 2%] 689s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_to_self PASSED [ 2%] 693s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes PASSED [ 2%] 700s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_custom_weights PASSED [ 2%] 704s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_align PASSED [ 2%] 704s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_to_self PASSED [ 2%] 705s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces PASSED [ 2%] 705s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_to_self PASSED [ 2%] 705s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres PASSED [ 2%] 706s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_without_superimposition XPASS [ 2%] 706s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_convergence PASSED [ 2%] 707s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_convergence PASSED [ 2%] 708s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_hes_error_estimation XPASS [ 2%] 709s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation PASSED [ 2%] 712s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_ces_error_estimation_ensemble_bootstrap PASSED [ 2%] 714s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncore::test_dres_error_estimation PASSED [ 2%] 714s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_one_ensemble PASSED [ 2%] 714s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_ensembles PASSED [ 2%] 715s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_three_ensembles_two_identical PASSED [ 2%] 715s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods PASSED [ 2%] 715s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagationNative_direct PASSED [ 2%] 715s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_AffinityPropagation_direct PASSED [ 2%] 715s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_KMeans_direct PASSED [ 2%] 716s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_DBSCAN_direct PASSED [ 2%] 716s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_different_methods PASSED [ 2%] 716s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_method_w_no_distance_matrix PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_clustering_two_methods_one_w_no_distance_matrix PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_sklearn_affinity_propagation PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_init PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_Cluster_init PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_ids PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_ClusterCollection_get_centroids PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_add_metadata PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_empty_cluster PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_centroid_not_in_elements PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_metadata_size_error PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_iteration PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_len PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClustering::test_cluster_repr PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreClusteringSklearn::test_one PASSED [ 2%] 717s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_one_ensemble PASSED [ 2%] 718s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_ensembles PASSED [ 2%] 718s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_three_ensembles_two_identical PASSED [ 2%] 718s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_specified_dimension PASSED [ 2%] 718s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_SPENative_direct PASSED [ 2%] 719s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_PCA_direct PASSED [ 2%] 719s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_different_method PASSED [ 2%] 719s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_methods PASSED [ 2%] 720s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreDimensionalityReduction::test_dimensionality_reduction_two_different_methods PASSED [ 2%] 720s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreConfDistMatrix::test_get_distance_matrix PASSED [ 2%] 720s testsuite/MDAnalysisTests/analysis/test_encore.py::TestEncoreImportWarnings::test_import_warnings PASSED [ 2%] 721s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis0] PASSED [ 2%] 721s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis0] PASSED [ 2%] 723s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis0] PASSED [ 2%] 724s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis0] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm[client_GNMAnalysis1] PASSED [ 2%] 725s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_run_step[client_GNMAnalysis1] PASSED [ 2%] 727s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis[client_GNMAnalysis1] PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_closeContactGNMAnalysis_weights_None[client_GNMAnalysis1] PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_generate_kirchoff PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_gnm.py::test_gnm_SVD_fail PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_plane_circle PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_ortho_circle PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle PASSED [ 2%] 729s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_around_circle_rising PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_local_screw_angles_parallel_axes PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_helix_analysis_square_oct PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_summary PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_regression_values PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_selections PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins PASSED [ 2%] 730s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_universe_from_origins_except PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_multiple_atoms_per_residues PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_split PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_residue_gaps_no_split PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_len_groups_short PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis0-screw_angles0] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis1-screw_angles1] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis2-screw_angles2] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis3-screw_angles3] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis4-screw_angles4] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis5-screw_angles5] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis6-screw_angles6] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis7-screw_angles7] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis8-screw_angles8] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis9-screw_angles9] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis10-screw_angles10] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis11-screw_angles11] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis12-screw_angles12] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis13-screw_angles13] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::TestHELANAL::test_helanal_zigzag[ref_axis14-screw_angles14] PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_helix_analysis.py::test_vector_of_best_fit PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hole2.py::test_moved_to_mdakit_warning SKIPPED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_find_donors PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py::test_donors_nobonds PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_continuous_excl PASSED [ 2%] 731s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent PASSED [ 2%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_timecut PASSED [ 2%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_intermittent_excl PASSED [ 2%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_continuous PASSED [ 2%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_intermittent PASSED [ 2%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_wronglength_DA PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_exclusions PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_bond_type_VE PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_solve_before_run_VE PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_unslicable_traj_VE PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_repr PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::TestHydrogenBondAutocorrel::test_deprecation_warning PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_donors PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_donors_nobonds PASSED [ 3%] 732s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_find_hydrogen_donors_deprecation_warning PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py::test_moved_module_warning PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis0] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_first_hbond[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_hydrogen_bond_lifetime_intermittency[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_logging_step_not_1[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_all[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisBetween::test_between_PW_PP[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_count_by_ids[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_hbonds_deprecated_attr[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessAcceptors_GuessHydrogens_UseTopology_::test_no_hydrogens[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3PStartStep::test_count_by_type[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_hbond_analysis[client_HydrogenBondAnalysis1] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_info_exception PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_bond_donor_sel PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisIdeal::test_no_attr_hbonds PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_info_exception PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_bond_donor_sel PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_attr_hbonds PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisNoRes::test_no_hydrogen_bonds PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessDonors_NoTopology::test_guess_donors PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_empty_selection PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisTIP3P_GuessHydrogens_NoTopology::test_guess_hydrogens_min_max_mass PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[donors_sel] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[hydrogens_sel] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py::TestHydrogenBondAnalysisEmptySelections::test_empty_sel[acceptors_sel] PASSED [ 3%] 733s testsuite/MDAnalysisTests/analysis/test_leaflet.py::test_optional_nx SKIPPED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_leaflet_finder PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_string_vs_atomgroup_proper PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_optimize_cutoff PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_pbc_on_off_difference PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[True] PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[False] PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_sparse_on_off_none[None] PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_cutoff_update_default PASSED [ 3%] 734s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_write_selection PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_leaflet.py::TestLeafletFinder::test_component_index_is_not_none PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_invalid_grouping PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[atoms-expected_masses0-expected_charges0-expected_xmass0-expected_xcharge0] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[residues-expected_masses1-expected_charges1-expected_xmass1-expected_xcharge1] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[segments-expected_masses2-expected_charges2-expected_xmass2-expected_xcharge2] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_lineardensity[fragments-expected_masses3-expected_charges3-expected_xmass3-expected_xcharge3] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_updating_atomgroup PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_old_name_deprecations PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_lineardensity.py::test_parallel_analysis PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::test_notidynamics PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_selection_works PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_ag_accepted PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_updating_ag_rejected PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[foo] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[bar] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[yx] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_msdtype_error[zyx] PASSED [ 3%] 735s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xyz-3] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xy-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[xz-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[yz-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[x-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[y-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_step_traj_all_dims[z-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xyz-3] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xy-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[xz-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[yz-2] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[x-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[y-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_simple_start_stop_step_all_dims[z-1] PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDSimple::test_random_walk_u_simple PASSED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_default_per_particle SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xyz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xy] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[xz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[yz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[x] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[y] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims[z] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xyz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xy] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[xz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[yz] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[x] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[y] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_vs_simple_all_dims_per_particle[z] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xyz-3] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xy-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[xz-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[yz-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[x-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[y-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_step_traj_all_dims[z-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xyz-3] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xy-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[xz-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[yz-2] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[x-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[y-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_fft_start_stop_step_all_dims[z-1] SKIPPED [ 3%] 736s testsuite/MDAnalysisTests/analysis/test_msd.py::TestMSDFFT::test_random_walk_u_fft SKIPPED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_empty_ag_error PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_shape PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_results_keys PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_invalid_residue_types PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_selection_length_mismatch PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_deprecation_warning PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dist_strand_verification PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[0] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[1] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[2] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[parsnips] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[time] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_wc_dis_results_keyerrs[-1] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_minor_dist PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nucleicacids.py::test_major_dist PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[1-2-RNAA-RNAA-4.3874702] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_wc_pair[22-23-RNAA-RNAA-4.1716404] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[3-17-RNAA-RNAA-15.06506] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_minor_pair[20-5-RNAA-RNAA-3.219116] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[2-12-RNAA-RNAA-26.884272] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_major_pair[5-9-RNAA-RNAA-13.578535] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-9-3.16497] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_cp[RNAA-21-22.07721] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-1-359.5758] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_phase_as[RNAA-11-171.71645] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-5-expected_value0] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors[RNAA-21-expected_value1] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-6-279.15103] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_alpha[RNAA-18-298.09936] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-7-184.20501] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_beta[RNAA-15-169.70042] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-7-52.72022] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_gamma[RNAA-15-54.59684] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-7-84.80554] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_delta[RNAA-15-82.00043] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-7-200.4099] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_eps[RNAA-15-210.96953] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-7-297.84736] PASSED [ 3%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_zeta[RNAA-15-330.24898] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-1-178.37435] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-2-202.03418] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-7-200.91674] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_tors_chi[RNAA-15-209.32109] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-20-103.07024] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-5-156.62223] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-7-77.94538] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_hydroxyl[RNAA-15-130.18539] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[16-2-3-RNAA-RNAA-RNAA-314.69804] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_nuclinfo.py::test_pseudo_dihe_baseflip[8-9-10-RNAA-RNAA-RNAA-34.50106] PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cov PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cum_var PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pcs_n_components PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_different_steps PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_different_atoms PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_rerun PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_not_run PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_no_frames PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_can_run_frames PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_mismatch PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_transform_universe PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_no_pca_run PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_none_anchor PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_more_anchor PASSED [ 4%] 737s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_less_anchor PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_invalid_anchor PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_compare_projections PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_reconstruct_whole PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-0] PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-n21] PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[n12-n22] PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[0-1] PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_twice_projection[1-0] PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_project_extrapolate_translation PASSED [ 4%] 739s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cosine_content PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_mean_shape PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_calculate_mean PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_given_mean PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_wrong_num_given_mean PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_alignment PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_covariance_norm PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_rmsip_self PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_rmsip_ortho PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pytest_too_many_components PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_asymmetric_rmsip PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_cumulative_overlap_self PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_cumulative_overlap_ortho PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[rmsip] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_other[cumulative_overlap] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[rmsip] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_not_run_self[cumulative_overlap] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[rmsip] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_compare_wrong_class[cumulative_overlap] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[p_components] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[variance] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_pca_attr_warning[cumulated_variance] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_class_is_parallelizable[PCA-False] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_pca.py::test_supported_backends[PCA-backends0] PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_ag_ValueError PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_run PASSED [ 4%] 740s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_lb PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_fit PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_raise_NoDataError PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_ax_return PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_plot_with_ax PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test_current_axes PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lb] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[lp] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestPersistenceLength::test[fit] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_simple PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestFitExponential::test_fit_noisy PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_missing_bonds PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_sortbb PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_not_fragment PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_branches PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_persistencelength.py::TestSortBackbone::test_circular PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_psa.py::test_moved_to_mdakit_warning SKIPPED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_nbins PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_range PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count_sum PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_count PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_double_run PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_exclusion PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[residue-8] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[segment-0] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues[chain-8] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_ignore_same_residues_fails PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[bins] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[edges] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_rdf_attr_warning[count] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[density-1.956823] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[rdf-244602.88385] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm[none-4] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[Density-density] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_norm_values[None-none] PASSED [ 4%] 742s testsuite/MDAnalysisTests/analysis/test_rdf.py::test_unknown_norm PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_nbins PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_range PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count_size PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_count PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_double_run PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_cdf PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[None-26551.55088100731] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[False-26551.55088100731] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_density[True-0.021915460340071267] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_overwrite_norm PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[density-0.021915460340071267] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[rdf-26551.55088100731] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm[none-0.6] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[Density-density] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_norm_values[None-none] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_unknown_norm PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[rdf] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[bins] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[edges] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[count] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_rdf_s.py::test_rdf_attr_warning[cdf] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_get PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_no_attr PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_attr PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_set_key PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_MutableMapping__marker] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__abstractmethods__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__class_getitem__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__contains__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__copy__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delattr__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__delitem__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dict__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__dir__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__doc__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__eq__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__firstlineno__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__format__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ge__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getattribute__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getitem__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__getstate__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__gt__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__hash__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__init_subclass__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ior__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__iter__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__le__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__len__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__lt__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__module__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ne__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__new__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__or__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reduce_ex__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__repr__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__reversed__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__ror__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setattr__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__setitem__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__sizeof__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__slots__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__static_attributes__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__str__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__subclasshook__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[__weakref__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[_abc_impl] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[clear] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[copy] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[fromkeys] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[get] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[items] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[keys] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[pop] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[popitem] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[setdefault] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[update] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[values] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_existing_dict_attr[data] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_MutableMapping__marker] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__abstractmethods__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__class_getitem__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__contains__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__copy__] PASSED [ 4%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delattr__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__delitem__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dict__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__dir__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__doc__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__eq__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__firstlineno__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__format__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ge__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getattribute__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getitem__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__getstate__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__gt__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__hash__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__init_subclass__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ior__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__iter__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__le__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__len__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__lt__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__module__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ne__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__new__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__or__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reduce_ex__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__repr__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__reversed__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__ror__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setattr__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__setitem__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__sizeof__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__slots__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__static_attributes__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__str__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__subclasshook__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[__weakref__] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[_abc_impl] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[clear] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[copy] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[fromkeys] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[get] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[items] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[keys] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[pop] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[popitem] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[setdefault] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[update] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[values] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_wrong_init_type[data] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0123] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[0j] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[1.1] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[{}] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_weird_key[a b] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setattr_modify_item PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_setitem_modify_item PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_delattr PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_missing_delattr PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pop PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_update_data_fail PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_pickle PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args0-kwargs0-1] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args1-kwargs1-1] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args2-kwargs2-2] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_initialize_arguments[args3-kwargs3-1] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_Results::test_different_instances PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[1] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[2] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[5] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_results.py::Test_ResultsGroup::test_all_results[14] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_p_frames PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_no_center PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_center PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_list PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float32] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_superposition[float64] PASSED [ 5%] 743s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_1 PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_weights_and_superposition_2 PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_unequal_shape PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_wrong_weights PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_smaller PASSED [ 5%] 744s testsuite/MDAnalysisTests/analysis/test_rms.py::Testrmsd::test_with_superposition_equal PASSED [ 5%] 745s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD0] PASSED [ 5%] 746s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD0] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD0] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_weights_mass_is_mass_weighted[client_RMSD1] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_1D_array[client_RMSD1] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_custom_groupselection_weights_applied_mass[client_RMSD1] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_ref_length_unequal_len PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_mass_mismatches PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSD::test_group_selections_unequal_len PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf[client_RMSF0] PASSED [ 5%] 747s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_single_frame[client_RMSF0] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_identical_frames[client_RMSF0] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::TestRMSF::test_rmsf_attr_warning[client_RMSF0] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSD-True] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::test_class_is_parallelizable[RMSF-False] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSD-backends0] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_rms.py::test_supported_backends[RMSF-backends1] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_waterdynamics.py::test_moved_to_mdakit_warning SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_nodata PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection_type_error PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_distance_type_error PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_selection2_type_error PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty_selection PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_loop PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_accepter_pbc[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_accepter_donor[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_water_donor[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_donor_water_donor[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_empty PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_same_selection PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_2water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_3water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_4water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_22water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[hydrogen] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_acceptor_12water_accepter[heavy] PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_single_link PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_link PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_multiple_frame PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_filter PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_merge PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_count_by_type_order PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_hba PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_generate_table_s1s2 PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_duplicate_water PASSED [ 5%] 748s testsuite/MDAnalysisTests/analysis/test_wbridge.py::TestWaterBridgeAnalysis::test_warn_results_deprecated PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_none PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_auxdata PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_get_auxreader_for_wrong_format PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_read_next_timestep PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_core.py::test_notimplemented_memory_usage PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_pyedr_not_present_raises PASSED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_no_auxdata_provided SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_n_steps SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_initial_time SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_first_step SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_rewind SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_step SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_last_step SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_next_past_last_step_raises_StopIteration SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_move_to_invalid_step_raises_IndexError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_step_to_time_raises_ValueError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_start_after_stop_raises_IndexError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_out_of_range_raises_IndexError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_slice_non_int_raises_TypeError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_bad_represent_raises_ValueError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_data_selector SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_no_constant_dt SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_update_ts_without_auxname_raises_ValueError SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_closest_with_cutoff SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_auxreader_for SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxiliary_read_ts_rewind SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_description SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_load_from_description SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_out_of_bounds SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_no_time_diff SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_go_to_step_fail SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[True] SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_set_constant_dt[False] SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_copy SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_step_to_frame_time_diff SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_lower_freq_timestep SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_higher_freq_timestep SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_offset_timestep SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_represent_as_average_with_cutoff SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_file SKIPPED [ 5%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_all_terms_from_reader SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_file SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_term_list_custom_names_from_reader SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_raise_error_if_auxname_already_assigned SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_file SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_add_single_term_custom_name_from_reader SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_terms_update_on_iter SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_invalid_data_selector SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_read_all_times SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_string SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_from_list SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_everything SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[42] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[Not a valid term] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_get_data_invalid_selections[get_data_input2] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_space_in_aux_spec SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warn_too_much_memory_usage SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_auxreader_picklable SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_units_are_converted_by_EDRReader SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_warning_when_unknown_unit SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::TestEDRReader::test_unit_conversion_is_optional SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_edr.py::test_single_frame_input_file SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_none PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_time_invalid_index PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGStep::test_select_data_none PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_n_steps PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_initial_time PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_first_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_rewind PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_last_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_bad_represent_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_no_constant_dt PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_lower_freq_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_average_with_cutoff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_offset_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_read_higher_freq_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_auxreader_for PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_get_description PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_load_from_description PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_no_time_diff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_step_to_frame_time_diff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_go_to_step_fail PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[True] PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_set_constant_dt[False] PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_copy PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_raise_error_no_auxdata_provided PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_n_steps PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_initial_time PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_first_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_rewind PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_last_step PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_next_past_last_step_raises_StopIteration PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_move_to_invalid_step_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_invalid_step_to_time_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_start_after_stop_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_out_of_range_raises_IndexError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_slice_non_int_raises_TypeError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_bad_represent_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_no_constant_dt PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_update_ts_without_auxname_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_lower_freq_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_average_with_cutoff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_offset_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_represent_as_closest_with_cutoff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_read_higher_freq_timestep PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_auxiliary_read_ts_rewind PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_description PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_load_from_description PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_out_of_bounds PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_no_time_diff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_step_to_frame_time_diff PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_go_to_step_fail PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[True] PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_set_constant_dt[False] PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_copy PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_changing_n_col_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_data_selector_out_of_range_raises_ValueError PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_get_auxreader_for PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::TestXVGFileReader::test_reopen PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_bz2 PASSED [ 6%] 748s testsuite/MDAnalysisTests/auxiliary/test_xvg.py::test_xvg_file_bz2 PASSED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_base.py::test_coordinate_converterbase_warning PASSED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_base.py::test_converters_converterbase_no_warning PASSED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRequiresRDKit::test_converter_requires_rdkit PASSED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[mol2_mol-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_coordinates[smiles_mol-3] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_no_coordinates SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitReader::test_compare_mol2reader SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_no_atoms_attr SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[H]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_single_atom_mol[[He]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[PRO-14-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ILE-38-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[ALA-20-2] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_mol_from_selection[GLY-21-3] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 1-0] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resname LYS and name NZ-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_monomer_info[resid 34 and altloc B-2] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_identical_topology[mol2_mol] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_identical_topology[smiles_mol] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_raise_requires_elements SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_warn_guess_bonds SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_bonds_outside_sel SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_error_no_hydrogen SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_error_no_hydrogen_implicit SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_warning_no_hydrogen_force SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-N- N ] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CA- CA ] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CAT- CAT] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-N1- N1 ] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-CE2- CE2] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-C12- C12] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-HD12-HD12] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[names-C123-C123] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[altLocs-A-A] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[chainIDs-B-B] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[icodes-C-C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[occupancies-0.5-0.5] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[resnames-LIG-LIG] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[resids-123-123] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[segindices-1-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_add_mda_attr_to_rdkit[tempfactors-0.8-0.8] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[0] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[10] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_other_attributes[42] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_index_property[resname ALA] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_index_property[resname PRO and segid A] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_assign_coordinates SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_assign_stereochemistry SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_trajectory_coords SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_nan_coords SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_cache SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitConverter::test_sanitize_fail_warning SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C(-[H])(-[H])(-[H])-[H]-C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[C](-[H])(-[H])-[C](-[H])-[H]-C=C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[C]1(-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C]1(-[H])-c1ccccc1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C-[C](-[H])-[O]-C(=O)C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[H]-[C](-[O])-[N](-[H])-[H]-C(=O)N] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[N]-[C]-[H]-N#C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[C-[C](-[O]-[H])-[O]-CC(=O)O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O]-[H])(-[O]-[H])-[O]-P(O)(O)(O)=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O]-[H])(-[O])-[O]-P([O-])(O)(O)=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O]-[H])(-[O])(-[O])-[O]-P([O-])([O-])(O)=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[P](-[O])(-[O])(-[O])-[O]-P([O-])([O-])([O-])=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[H]-[O]-[N]-[O]-ON=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_bond_orders[[N]-[C]-[O]-N#C[O-]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[C](-[H])(-[H])(-[H])-[O]-4--1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N]-[C]-[O]-2--1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[[N](-[H])(-[H])(-[H])-[H]-0-1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_infer_charges[C-[C](-[O])-[O]-3--1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O]-[H])(-[O])-[O]-S(=O)(=O)(O)O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O]-[H])(-[O])(-[O])-[O]-S(=O)(=O)([O-])O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[S](-[O])(-[O])(-[O])-[O]-S(=O)(=O)([O-])[O-]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[H])-[C](-[N](-[H])-[H])-[N](-[H])-[H]-CNC(N)=[N+](-[H])-[H]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C](-[H])-[C](-[H])-[H]-C([O-])=C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O]-C[N+](=O)[O-]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C(-[N](-[O])-[O])-[N](-[O])-[O]-C([N+](=O)[O-])[N+](=O)[O-]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[C-[N](-[O])-[O].C-[N](-[O])-[O]-C[N+](=O)[O-].C[N+](=O)[O-]] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[C-](=O)-C-[C](=O)-C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[N-]-C-[H]-[N]-C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])-[C](-[H])1-[O-]c1ccccc1] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[O]-[C]1-[C](-[H])-[C](-[H])-[C](-[H])-[C]1-[O]-[O-]C1=CC=CC1=O] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C](-[H])-[C](-[H])-[H]-C#CC=C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_standardize_patterns[[H]-[C]-[C]-[C]-[C]-[H]-C#CC#C] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-42-GetIntProp] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value1-GetIntProp] SKIPPED [ 6%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value2-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value3-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value4-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value5-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value6-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value7-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[index-value8-GetIntProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-4.2-GetDoubleProp0] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-value10-GetDoubleProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[charge-4.2-GetDoubleProp1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_set_atom_property[type-C.3-GetProp] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ignore_prop SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[c1ccc(cc1)-c1ccccc1-c1ccccc1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[c1cc[nH]c1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_transfer_properties[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccccc1-c1ccccc1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1cc[nH]c1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc(cc1)-c1ccc(-c2ccccc2)c(-c2ccccc2)c1-c1ccccc1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1ccc2c(c1)c1ccccc1c1ccccc1c1ccccc1c1ccccc21] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1csc(c1)-c1ccoc1-c1cc[nH]c1] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C1=C2C(=NC=N1)N=CN2] SKIPPED [ 7%] 748s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CN1C=NC(=C1SC2=NC=NC3=C2NC=N3)[N+](=O)[O-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1c[nH]c(c1)-c1ccc(s1)-c1ccoc1-c1c[nH]cc1-c1ccccc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=CC=CC=CC=CC=CC=C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCCC([NH3+])C(=O)[O-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C=CC1=C(C)CCCC1(C)C)=CC=CC(C)=CC=[NH+]C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C#CC=C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CNC=N1)N)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=CN=CN1)N)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CCOC(=O)c1cc2cc(C(=O)O)ccc2[nH]1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1cccnc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[PH4+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1nc[nH]n1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(=O)C=C(C)N] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)=CC=C[O-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=S(C)(C)=NC] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1ccc2c3ncn(Cc4ccco4)c(O)c-3nc2c1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CCCC/C=C/C#CC#CCCCCCCCC(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[c1c2c(=O)n3cccc(C)c3nc2n(C)c(=N)c1C(=O)NCc1cnccc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N#Cc1c[nH]c(C(=O)NC(=O)c2cc[n+]([O-])cc2)n1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](Oc1cc(F)ccc1Nc1ncnc2cc(N=S3(=O)CCC3)cc(F)c12)C(=O)NCC#N] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-][n+]1onc2ccccc21] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cc[n+](CC[n+]2ccc(C)cc2)cc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]c1ccccc1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]C=CC=CCC=CC=[N+](C)C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C=[N+](-[O-])-C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C-[N-]-C(=O)C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCC(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC[C@H](C)[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)C[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=C(O)[C@@H]1CCCN1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccccc1)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]c2ccccc12)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1ccc(O)cc1)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CC(=O)O)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CCC(=O)O)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N=C(N)NCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](Cc1c[nH]cn1)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NCCCC[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CO)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[C@@H](O)[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N[C@@H](CS)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CSCC[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)C[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[NC(=O)CC[C@H](N)C(=O)O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ncnc2c1ncn2[C@H]1C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1cn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]c1=O] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[O=c1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1ccn([C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)n1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Nc1nc2c(ncn2[C@H]2C[C@H](OP(=O)(O)O)[C@@H](COP(=O)(O)O)O2)c(=O)[nH]1] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)NS(C)(=O)=Nc1ccc(-c2ccc(-c3nc4[nH]c(O[C@@H]5CO[C@@H]6[C@H](O)CO[C@H]56)nc4cc3Cl)cc2)cc1 CHEMBL4111464] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1c2ccccc2c(C(=O)O)c2[nH]c3ccc(Br)cc3c21 CHEMBL511591] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[C[n+]1ccccc1-c1ccc(NC(=O)c2ccc(C(=O)Nc3ccc(-c4cccc[n+]4C)cc3)cc2)cc1 CHEMBL3230729] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[Cc1ccc(/C(O)=C(/C([S-])=NCc2ccccc2)[n+]2cccc(CO)c2)cc1[N+](=O)[O-] CHEMBL1596426] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[CC(C)(O)c1cc2c(cc1C(C)(C)O)-c1ccccc1-2 CHEMBL1990966] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[[O-]/N=C1/c2ccccc2-c2nc3ccc(C(F)(F)F)cc3nc21 CHEMBL4557878] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant[N#Cc1c[nH]c(C(=O)Nc2ccc(-c3cccc[n+]3[O-])cc2C2=CCCCC2)n1 CHEMBL1172116] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#N] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-N=[N+]=[N-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[O+]=C] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_order_independant_issue_3339[C-[N+]#[C-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_warn_conjugated_max_iter SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Li+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[K+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Rb+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ag+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cs+]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Mg+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ca+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cu+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Zn+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Sr+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Ba+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Al+3]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Fe+2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Cl-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[O-2]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_ions[[Na+].[Cl-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=C([C@H](CC1=C[NH1+]=CN1)[NH3+])[O-]] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_reorder_atoms[O=S(C)(C)=NC] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_pdb_names SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F/C(Br)=C(Cl)/I] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F\\C(Br)=C(Cl)\\I] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_bond_stereo_not_stereoany[F-C(Br)=C(Cl)-I] SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/converters/test_rdkit.py::TestRDKitFunctions::test_atom_sorter SKIPPED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_reader PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_inpcrd PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py::TestINPCRDReader::test_universe_restrt PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_regular_repr PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_truncated_repr PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_trajectory PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_atoms PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_n_frames PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_jump_lastframe_trajectory PASSED [ 7%] 749s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_slice_trajectory PASSED [ 7%] 750s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_full_slice PASSED [ 7%] 750s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame_numbering PASSED [ 7%] 750s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_next_after_frame_numbering PASSED [ 7%] 750s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_frame PASSED [ 7%] 750s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_write_dcd PASSED [ 7%] 752s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_iteration PASSED [ 7%] 752s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_slice PASSED [ 7%] 752s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transform_switch PASSED [ 7%] 752s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReader::test_transfrom_rewind PASSED [ 7%] 753s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_tuples PASSED [ 7%] 753s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_format_lammps PASSED [ 7%] 755s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_format_tuples_and_format PASSED [ 7%] 755s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_one_format_tuple PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderFormats::test_set_all_formats PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info0-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info1-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info2-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info3-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info4-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info5-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info6-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-xtc] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_order[seq_info7-trr] PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_start_frames PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_missing PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_warning PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_interleaving_error PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_easy_trigger_warning PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_single_frames PASSED [ 7%] 756s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_mixed_filetypes PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::TestChainReaderContinuous::test_unsupported_filetypes PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l0-ref0] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l1-ref1] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l2-ref2] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l3-ref3] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_multilevel_arg_sort[l4-ref4] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l0-ref0] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l1-ref1] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l2-ref2] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l3-ref3] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l4-ref4] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l5-ref5] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l6-ref6] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l7-ref7] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l8-ref8] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l9-ref9] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l10-ref10] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l11-ref11] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l12-ref12] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l13-ref13] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_filter_times[l14-ref14] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_4008 PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_chainreader.py::test_issue_3349 PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader0] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader1] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader2] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader3] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader4] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader5] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader6] PASSED [ 7%] 757s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader7] PASSED [ 7%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader8] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader9] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader10] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader11] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader12] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader13] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader14] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader15] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader16] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader17] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader18] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader19] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader20] PASSED [ 8%] 758s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader21] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader22] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader23] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader24] SKIPPED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_n_atoms[ref_reader26] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader0] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader1] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader2] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader3] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader4] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader5] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader6] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader7] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader8] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader9] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader10] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader11] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader12] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader13] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader14] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader15] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader16] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader17] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader18] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader19] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader20] PASSED [ 8%] 759s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader21] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader22] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader23] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader24] SKIPPED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_filename[ref_reader26] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args0] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args1] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args2] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args3] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args4] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args5] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args6] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args7] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args8] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args9] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args10] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args11] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args12] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args13] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args14] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args15] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args16] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args17] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args18] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args19] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args20] PASSED [ 8%] 761s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args21] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args22] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args23] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args24] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_copied_extra_attributes[ref_reader_extra_args26] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader0] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader1] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader2] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader3] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader4] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader5] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader6] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader7] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader8] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader9] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader10] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader11] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader12] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader13] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader14] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader15] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader16] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader17] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader18] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader19] SKIPPED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader20] PASSED [ 8%] 763s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader21] PASSED [ 8%] 764s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader22] PASSED [ 8%] 764s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader23] SKIPPED [ 8%] 764s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader24] SKIPPED [ 8%] 764s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_independent_iteration[ref_reader26] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader0] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader1] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader2] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader3] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader4] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader5] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader6] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader7] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader8] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader9] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader10] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader11] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader12] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader13] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader14] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader15] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader16] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader17] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader18] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader19] SKIPPED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader20] PASSED [ 8%] 765s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader21] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader22] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader23] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader24] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_frame_maintained[ref_reader26] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader0] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader1] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader2] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader3] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader4] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader5] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader6] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader7] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader8] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader9] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader10] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader11] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader12] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader13] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader14] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader15] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader16] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader17] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader18] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader19] SKIPPED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader20] PASSED [ 8%] 767s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader21] SKIPPED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader22] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader23] SKIPPED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader24] SKIPPED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_reader_initial_next[ref_reader26] SKIPPED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader0] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader1] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader2] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader3] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader4] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader5] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader6] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader7] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader8] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader9] PASSED [ 8%] 769s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader10] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader11] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader12] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader13] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader14] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader15] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader16] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader17] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader18] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader19] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader20] PASSED [ 8%] 770s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader21] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader22] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader23] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader24] SKIPPED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_positions_share_memory[ref_reader26] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_no_pyedr PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_copying.py::test_copy_with_auxiliary_pyedr SKIPPED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.bz2] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_atoms[test.crd.gz] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_roundtrip PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriter::test_write_EXT_read PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resnames] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[resids] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[names] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_warns[tempfactors] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resnames] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[resids] PASSED [ 8%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[names] PASSED [ 9%] 771s testsuite/MDAnalysisTests/coordinates/test_crd.py::TestCRDWriterMissingAttrs::test_write[tempfactors] PASSED [ 9%] 771s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_atoms PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_n_frames PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_frame PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_double_close PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_1 PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_writer_2 PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_ts_dt_matches_reader PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_first_dimensions PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_changing_dimensions PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_volume PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_same_auxname_raises_ValueError PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_auxiliary PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_get_aux_attribute PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reload_auxiliaries_from_description PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_stop_iter PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_iter PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_2iter PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_slice PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_switch_frame PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformation_rewind PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_transformations_copy PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_add_another_transformations_raises_ValueError PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_reader PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_frame_collect_all_same XFAIL [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_go_over_last_frame PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_reopen PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_next_ts_reader PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_pickle_last_ts_reader PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_empty_dcd PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDReader::test_with_statement PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_different_box PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_selection PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_none PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_no_container PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::TestDCDWriter::test_write_not_changing_ts PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_random_unitcell PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_empty_dimension_warning PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_rewind PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_next PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_jump_last_frame PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[5-17-3] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_slice[20-5--1] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[list] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_array_like[array] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices0] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_list_indices[indices1] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_reader_set_dt PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[dcd-4] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_dt[xtc-3] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[istart-0] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_DCDWriter_default[nsavc-1] PASSED [ 9%] 772s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[dcd-5] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_other_writer[xtc-2] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_single_frame PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_no_natoms PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_writer_trajectory_no_natoms PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_read_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefCHARMMtriclinicDCD] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_write_unitcell_triclinic[RefNAMDtriclinicDCD] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ncdf2dcd_coords PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe0] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe1] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe2] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_ts_time[universe3] PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_pathlib PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dcd.py::test_large_dcdfile SKIPPED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_positions PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_velocities PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_forces PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader::test_read PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_read_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_positions PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_velocities PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigOrder::test_forces PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_positions PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_read_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_velocities PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigMinimal::test_forces PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_names PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_pos PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_vel PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_for PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReader2::test_number PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_names PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_pos PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_number PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_vel PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestConfigReaderMinimal2::test_for PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_len PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_getting PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_slicing_2 PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_position PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_velocity PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_force PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistory::test_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_len PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_getting PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_slicing_2 PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_position PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_velocity PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_force PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryOrder::test_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_len PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_getting PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_slicing_2 PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_position PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_velocity PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_force PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimal::test_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_len PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_getting PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_slicing_2 PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_position PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_unitcell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_velocity PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dlpoly.py::TestDLPolyHistoryMinimalCell::test_force PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_global_cell PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_velocities PASSED [ 9%] 773s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_number_of_coords PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_coords_atom_0 PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_n_frames PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_0 PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_dms.py::TestDMSReader::test_frame_index_1_raises_IndexError PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_single_file PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_uses_FHIAIMSReader PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_dimensions PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_atoms PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_fhiaims_positions PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_n_frames PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_periodicity PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_relative_positions_no_box PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_missing_velocity PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_velocity_wrong_position PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_bad_input_wrong_input_line PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_good_input_with_velocity PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSReader::test_mixed_units PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_different_box PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_selection PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_none PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_no_container PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_write_not_changing_ts PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_velocity PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_no_atom_names PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_fhiaims.py::TestFHIAIMSWriter::test_writer_with_n_atoms_none PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_n_frames PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_random_access PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_rewind PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_next PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReader::test_step5distances PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_n_frames PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_random_access PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_rewind PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_next PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderSO::test_step5distances PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_n_frames PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_random_access PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_rewind PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_next PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gms.py::TestGMSReaderASS::test_step5distances PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_load_gro PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_coordinates PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_distances PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_selection PASSED [ 9%] 774s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderOld::test_unitcell PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_coordinates PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_distances PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_unitcell PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversionOld::test_volume PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_atoms PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_n_frames PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_frame PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_double_close PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_1 PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_writer_2 PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_ts_dt_matches_reader PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_first_dimensions PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_changing_dimensions PASSED [ 9%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_volume PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_same_auxname_raises_ValueError PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_auxiliary PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_get_aux_attribute PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_reload_auxiliaries_from_description PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_stop_iter PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_iter PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_2iter PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_slice PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_switch_frame PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformation_rewind PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_transformations_copy PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_add_another_transformations_raises_ValueError PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_pickle_reader PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_frame_collect_all_same PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReader::test_full_slice PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_different_box PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_selection PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_none PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_no_container PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_not_changing_ts PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_velocities PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resnames PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_write_no_resids PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_writer_no_atom_names PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_min PASSED [ 10%] 775s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriter::test_check_coordinate_limits_max_noconversion PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_atoms PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_n_frames PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_double_close PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_1 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_writer_2 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_ts_dt_matches_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_first_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_changing_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_volume PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_same_auxname_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_auxiliary PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_get_aux_attribute PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_reload_auxiliaries_from_description PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_stop_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_2iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_slice PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_switch_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformation_rewind PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_transformations_copy PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_add_another_transformations_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_pickle_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderNoConversion::test_frame_collect_all_same PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_different_box PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_selection PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_none PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_no_container PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterNoConversion::test_write_not_changing_ts PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_atoms PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_n_frames PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_double_close PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_1 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_writer_2 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_ts_dt_matches_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_first_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_changing_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_volume PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_same_auxname_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_auxiliary PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_get_aux_attribute PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_reload_auxiliaries_from_description PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_stop_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_2iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_slice PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_switch_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformation_rewind PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_transformations_copy PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_add_another_transformations_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_pickle_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROReaderIncompleteVelocities::test_frame_collect_all_same PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_different_box PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_selection PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_none PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_no_container PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROWriterIncompleteVelocities::test_write_not_changing_ts PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_atoms PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_n_frames PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_double_close PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_1 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_writer_2 PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_ts_dt_matches_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_first_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_changing_dimensions PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_volume PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_same_auxname_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_auxiliary PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_get_aux_attribute PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_reload_auxiliaries_from_description PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_stop_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_2iter PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_slice PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_switch_frame PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformation_rewind PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_transformations_copy PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_add_another_transformations_raises_ValueError PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_pickle_reader PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Reader::test_frame_collect_all_same PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_different_box PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_selection PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_none PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_no_container PASSED [ 10%] 776s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROBZ2Writer::test_write_not_changing_ts PASSED [ 10%] 777s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_different_box PASSED [ 10%] 780s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_selection PASSED [ 10%] 780s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_none PASSED [ 10%] 780s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_no_container PASSED [ 10%] 781s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_write_not_changing_ts PASSED [ 10%] 785s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGROLargeWriter::test_writer_large_residue_count PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_growriter_resid_truncation PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_true PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_growriter_resid_false PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_false PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::TestGrowriterReindex::test_writer_resid_true PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_multiframe_gro PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_huge_box_gro PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[1] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[2] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[4] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[5] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[6] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[7] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_bad_box[8] PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gro.py::test_gro_empty_box_write_read PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_no_gsd_u_raises PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::test_gsd_reader_raises PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_positions SKIPPED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_n_frames SKIPPED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_dimensions SKIPPED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_gsd.py::TestGSDReader::test_gsd_data_step SKIPPED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_atoms PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_n_frames PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_frame PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_double_close PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_ts_dt_matches_reader PASSED [ 10%] 786s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_first_dimensions PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_changing_dimensions PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_volume PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_same_auxname_raises_ValueError PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_auxiliary PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_aux_attribute PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reload_auxiliaries_from_description PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_stop_iter PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_iter PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_2iter PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_slice PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_switch_frame PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformation_rewind PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_transformations_copy PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_add_another_transformations_raises_ValueError PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_reader PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_frame_collect_all_same PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_go_over_last_frame PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_reopen PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_next_ts_reader PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_pickle_last_ts_reader PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_1 PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_get_writer_2 PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderBaseAPI::test_copying PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_different_box PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_selection PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_none PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_no_container PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterBaseAPI::test_write_not_changing_ts PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_n_frames PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_positions PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_velocities PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_forces PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_dimensions PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_h5md_data_step PASSED [ 10%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_rewind PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_next PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_jump_last_frame PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[0-2-1] PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_slice[1-2-1] PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[list] PASSED [ 11%] 787s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_array_like[array] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_list_indices PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[position-positions] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[velocity-velocities] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_group[force-forces] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/value] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[position/time] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[velocity/value] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_unknown_unit[force/value] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_length_unit_from_box PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[position] PASSED [ 11%] 788s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[velocity] PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_changing_n_atoms[force] PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_2D_box PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_box_vector PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_box PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_groups PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_convert_units PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_no_units_but_convert_units_true_error PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_filestream XFAIL [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_wrong_driver PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_open_with_driver PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[velocity-force] PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-force] PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms[position-velocity] PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithRealTrajectory::test_parse_n_atoms_error PASSED [ 11%] 789s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0-ValueError-H5MDWriter: no atoms in output trajectory] PASSED [ 11%] 790s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_n_atoms_errors[0.5-OSError-H5MDWriter: Timestep does not have] PASSED [ 11%] 790s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_chunk_error PASSED [ 11%] 790s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[None] PASSED [ 11%] 790s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_dimensions[0] PASSED [ 11%] 791s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_not_monotonic PASSED [ 11%] 791s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_step_from_frame PASSED [ 11%] 791s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_has_property PASSED [ 11%] 791s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-False] PASSED [ 11%] 791s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-False] PASSED [ 11%] 792s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-False-True] PASSED [ 11%] 792s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[True-True-True] PASSED [ 11%] 792s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-True-True] PASSED [ 11%] 792s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-True] PASSED [ 11%] 792s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_trajectory[False-False-False] PASSED [ 11%] 793s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_AtomGroup_with PASSED [ 11%] 793s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[None-1] PASSED [ 11%] 793s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_ag_write[all-3] PASSED [ 11%] 793s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[fs-Angstrom-Angstrom/ps-kJ/(mol*Angstrom)] PASSED [ 11%] 793s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[s-pm-m/s-Newton] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[ps-fm-Angstrom/fs-kcal/(mol*Angstrom)] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_custom_units[AKMA-nm-Angstrom/AKMA-kcal/(mol*Angstrom)] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[imaginary time-None-None-None] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-c-None] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-None-None-HUGE FORCE] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_bad_units[None-lightyear-None-None] PASSED [ 11%] 794s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_true PASSED [ 11%] 795s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_no_units_w_convert_false PASSED [ 11%] 795s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[True] PASSED [ 11%] 795s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_convert_units[False] PASSED [ 11%] 796s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks0] PASSED [ 11%] 796s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks1] PASSED [ 11%] 796s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks[chunks2] PASSED [ 11%] 797s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_chunks_with_nframes PASSED [ 11%] 797s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous1 PASSED [ 11%] 797s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_contiguous2 PASSED [ 11%] 797s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-1] PASSED [ 11%] 798s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[gzip-9] PASSED [ 11%] 798s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_compression[lzf-None] PASSED [ 11%] 798s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[core] PASSED [ 11%] 798s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_write_with_drivers[stdio] PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDWriterWithRealTrajectory::test_parallel_disabled PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_reader_no_h5py PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5PYNotInstalled::test_writer_no_h5py PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_issue4598 PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_h5md.py::TestH5MDReaderWithObservables::test_read_h5md_malformed PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datareader_ValueError PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_n_atoms PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_coords PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_velos PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_dimensions PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_singleframe PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsData_Coords::test_seek_2 PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_n_atoms PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_coords PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_velos PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_dimensions PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_singleframe PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDataMini_Coords::test_seek_2 PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_vel_force PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_image_wrap PASSED [ 11%] 799s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_unwrap_no_image PASSED [ 11%] 801s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 11%] 801s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 11%] 801s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-bonds] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-angles] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-dihedrals] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-impropers] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-bonds] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-angles] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-dihedrals] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-impropers] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/mini.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-bonds] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-angles] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-dihedrals] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-impropers] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-bonds] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-angles] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-dihedrals] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_atoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-impropers] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_dimensions[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-masses] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-charges] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-velocities] PASSED [ 11%] 802s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_numerical_attrs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data-positions] PASSED [ 11%] 803s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag0] PASSED [ 11%] 803s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag1] PASSED [ 11%] 803s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag2] PASSED [ 11%] 803s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag3] PASSED [ 11%] 805s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_molecule_tag::test_molecule_tag[LAMMPSDATAWriter_molecule_tag4] PASSED [ 11%] 805s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data] PASSED [ 11%] 805s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.bz2] PASSED [ 11%] 805s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_datawriter_universe[out.data.gz] PASSED [ 11%] 805s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[masses] PASSED [ 11%] 806s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[charges] PASSED [ 11%] 806s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[velocities] PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_Writer_atoms[positions] PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_bonds PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDATAWriter_data_partial::test_n_angles PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_Reader_is_LAMMPS PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_atoms PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_n_frames PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_dimensions PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_LAMMPSDCDReader_set_dt PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_time_unit PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDReader::test_wrong_unit PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer_is_LAMMPS PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_Writer PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter_is_LAMMPS PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriter::test_OtherWriter PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_Writer_is_LAMMPS PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_open PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_time_unit PASSED [ 11%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLAMMPSDCDWriterClass::test_wrong_unit PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_triclinicness PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_masses PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_no_types PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestDataWriterErrors::test_write_non_numerical_types PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unscaled] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[unwrapped] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_absent_convention_fails[scaled_unwrapped] PASSED [ 12%] 808s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_incorrect_convention_fails PASSED [ 12%] 809s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[auto-unscaled] PASSED [ 12%] 809s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unscaled-unscaled] PASSED [ 12%] 810s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled-scaled] PASSED [ 12%] 810s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[unwrapped-unwrapped] PASSED [ 12%] 810s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_open_all_convention[scaled_unwrapped-scaled_unwrapped] PASSED [ 12%] 810s testsuite/MDAnalysisTests/coordinates/test_lammps.py::test_no_coordinate_info PASSED [ 12%] 813s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unscaled_reference PASSED [ 12%] 815s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_reference PASSED [ 12%] 817s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_reference PASSED [ 12%] 820s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_scaled_unscaled_match PASSED [ 12%] 823s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_unwrapped_scaled_unwrapped_match PASSED [ 12%] 825s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestCoordinateMatches::test_auto_is_unscaled_match PASSED [ 12%] 825s testsuite/MDAnalysisTests/coordinates/test_lammps.py::TestLammpsTriclinic::test_box PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_atoms PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_n_frames PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_frame PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_double_close PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_ts_dt_matches_reader PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_first_dimensions PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_changing_dimensions PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_volume PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_same_auxname_raises_ValueError PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_auxiliary PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_aux_attribute PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reload_auxiliaries_from_description PASSED [ 12%] 826s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_stop_iter PASSED [ 12%] 827s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_iter PASSED [ 12%] 827s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_2iter PASSED [ 12%] 827s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_slice PASSED [ 12%] 827s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_switch_frame PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformation_rewind PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_transformations_copy PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_add_another_transformations_raises_ValueError PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_reader PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_frame_collect_all_same XFAIL [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_go_over_last_frame PASSED [ 12%] 828s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_reopen PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_next_ts_reader PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_pickle_last_ts_reader PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_transefer_to_memory PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_filename_array PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_default_memory_layout PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_afc PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fac PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_cfa PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_acf PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_fca PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_extract_array_caf PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_repr PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_1 PASSED [ 12%] 829s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_get_writer_2 PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_float32 PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReader::test_position_assignation PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[2d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_velocities[3d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[2d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_forces[3d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-2d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[2d-3d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-2d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-2d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_both[3d-3d-3d] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-velocities] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[2d-forces] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-velocities] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderVelsForces::test_wrongshape[3d-forces] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_single_box PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_varying_box PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_length PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestDimensions::test_wrong_shape PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[positions] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[velocities] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[forces] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_copying[dimensions] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[positions] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[velocities] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[forces] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_attr_set[dimensions] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[velocities] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[forces] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_memory.py::TestMemoryReaderModifications::test_non_numpy_arr[dimensions] PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_frame_size PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_read_positions PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_velocities PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_forces PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReader::test_len PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_frame_size PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_read_positions PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_velocities PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_forces PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::TestMMTFReaderGZ::test_len PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_dimensionless PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mmtf.py::test_deprecation PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_read_statusbit PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_selection PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_write_in_loop PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_broken_molecule PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_comments_header PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2::test_no_bonds PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_lastframe_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_jump_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_n_frames PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_next_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_reverse_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_rewind_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMol2_traj::test_slice_traj PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_load PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_universe PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::TestMOL2NoSubstructure::test_write_nostructure PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_write_NIE PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_multi_write PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_mol2.py::test_mol2_universe_write PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_load_prm PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_atoms PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_n_frames PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_periodic PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_amber_proteinselection PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_sum_centres_of_geometry PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_initial_frame_is_0 PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_starts_with_first_frame PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_rewind PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_full_slice PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_random_access PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_slice_iteration PASSED [ 12%] 830s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_metadata PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_get_writer_custom_n_atoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_wrong_natoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_read_on_closed PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader::test_mmap_kwarg PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_load_prm PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_atoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_n_frames PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_periodic PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_amber_proteinselection PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_sum_centres_of_geometry PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_initial_frame_is_0 PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_starts_with_first_frame PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_rewind PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_full_slice PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_random_access PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_slice_iteration PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_metadata PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_get_writer_custom_n_atoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_wrong_natoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_read_on_closed PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_None::test_mmap_kwarg PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_load_prm PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_atoms PASSED [ 12%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_n_frames PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_periodic PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_amber_proteinselection PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_sum_centres_of_geometry PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_initial_frame_is_0 PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_starts_with_first_frame PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_rewind PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_full_slice PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_random_access PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_slice_iteration PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_metadata PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_get_writer_custom_n_atoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_wrong_natoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_read_on_closed PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_True::test_mmap_kwarg PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_load_prm PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_atoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_n_frames PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_periodic PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_amber_proteinselection PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_sum_centres_of_geometry PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_initial_frame_is_0 PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_starts_with_first_frame PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_rewind PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_full_slice PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_random_access PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_slice_iteration PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_metadata PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_get_writer_custom_n_atoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_wrong_natoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_read_on_closed PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader_mmap_False::test_mmap_kwarg PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_load_prm PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_atoms PASSED [ 13%] 831s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_n_frames PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_periodic PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_amber_proteinselection PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_sum_centres_of_geometry PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_initial_frame_is_0 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_starts_with_first_frame PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_rewind PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_full_slice PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_random_access PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_slice_iteration PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_metadata PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_get_writer_custom_n_atoms PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_wrong_natoms PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_read_on_closed PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderTZ2::test_mmap_kwarg PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_1 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_positions_2 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_1 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_forces_2 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader2::test_box PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[0-0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_positions[8-1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[0-0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_forces[8-1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[0-0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_velocities[8-1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_nframes PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[0-0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader3::test_box[8-1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_chain_times PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReader4::test_warn_user_no_time_information PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_coordinates PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_velocities PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_forces PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation0-expected0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_box[mutation1-expected1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScaleFactorImplementation::test_scale_factor_not_float PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_type_errors[mutation2] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation2] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation3] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_value_errors[mutation4] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation2] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation3] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation4] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation5] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_notimplemented_errors[mutation6] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[yard-foot] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_verify_units_errors[second-minute] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_ioerror PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_conventionversion_warn PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation0] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_program_warn[mutation1] PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFReaderExceptionsWarnings::test_no_dt_warning PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netCDF4 PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_trajectory_netcdf PASSED [ 13%] 832s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[nc] PASSED [ 13%] 833s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_OtherWriter[ncdf] PASSED [ 13%] 833s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_TRR2NCDF PASSED [ 13%] 833s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriter::test_write_AtomGroup PASSED [ 13%] 833s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netCDF4 PASSED [ 13%] 833s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_trajectory_netcdf PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[nc] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_OtherWriter[ncdf] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_TRR2NCDF PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterTZ2::test_write_AtomGroup PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-False] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-False] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-False-True] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterVelsForces::test_write_u[True-True-True] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_factors_default PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_bad_scale_factor PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_factors_default PASSED [ 13%] 834s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_bad_scale_factor PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[-2.0--2.0--2.0--2.0--2.0--2.0] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[1.0-1.0-1.0-1.0-1.0-1.0] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_write_read_write[2.0-4.0-8.0-16.0-32.0-64.0] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestScipyScaleFactors::test_ncdf4_not_present PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[coordinates-angstrom] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[time-picosecond] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_lengths-angstrom] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[cell_angles-degree] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[velocities-angstrom/picosecond] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterUnits::test_writer_units[forces-kilocalorie/mole/angstrom] PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_zero_atoms_VE PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_netcdf.py::TestNCDFWriterErrorsWarnings::test_wrong_n_atoms PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_null.py::test_NullWriter PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_ENT PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_coordinates PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_dimensions PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_distances PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_0 PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_frame_index_1_raises_IndexError PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_full_slice PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_last_slice PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_load_file PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_atoms PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_n_frames PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_numres PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_pickle_singleframe_reader PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReader::test_uses_PDBReader PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_HEADER PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_TITLE PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_COMPND PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBMetadata::test_REMARK PASSED [ 13%] 835s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_coordinates PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_distances PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_0 PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_frame_index_1_raises_IndexError PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_full_slice PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_last_slice PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_load_file PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_long_resSeq PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_atoms PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_n_frames PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_numres PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestExtendedPDBReader::test_pickle_singleframe_reader PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resnames PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_resids PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_atom_names PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_altlocs PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_icodes PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_segids PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_occupancies PASSED [ 13%] 836s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_writer_no_tempfactors PASSED [ 13%] 837s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_Writer PASSED [ 13%] 837s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_single_frame_AtomGroup PASSED [ 13%] 837s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims0] PASSED [ 13%] 837s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_write_nodims[universe_and_expected_dims1] PASSED [ 13%] 838s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_min PASSED [ 13%] 838s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_coordinate_limits_max PASSED [ 13%] 838s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_HEADER_TITLE_multiframe PASSED [ 13%] 838s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[0-12] PASSED [ 13%] 838s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_check_MODEL_multiframe[9997-12] PASSED [ 13%] 840s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[@] PASSED [ 13%] 842s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[] PASSED [ 13%] 843s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_chainid_validated[AA] PASSED [ 13%] 844s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_stringio_outofrange PASSED [ 13%] 844s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_hetatm_written PASSED [ 13%] 844s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_default_atom_record_type_written PASSED [ 13%] 844s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_abnormal_record_type PASSED [ 14%] 844s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_bonds PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_reindex PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBWriter::test_no_reindex_missing_ids PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_frames PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_n_atoms_frame PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_rewind PASSED [ 14%] 845s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_slice_iteration PASSED [ 14%] 848s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_bonds_conect PASSED [ 14%] 848s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_conect_error PASSED [ 14%] 848s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBReader::test_numconnections PASSED [ 14%] 851s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_conect_bonds_all PASSED [ 14%] 851s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_partial PASSED [ 14%] 851s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_bonds_with_100000_ag_index PASSED [ 14%] 851s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atomselection PASSED [ 14%] 851s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_all_timesteps PASSED [ 14%] 852s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_loop PASSED [ 14%] 852s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestMultiPDBWriter::test_write_atoms PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_load_pdb PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_selection PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_atoms PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_frames PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_frame PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_coordinates PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_distances PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_unitcell PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_volume PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_n_residues PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBReaderBig::test_first_residue PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_ts_data_keys PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[occupancy-occupancies-vals0] PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBVaryingOccTmp::test_varying_attrs[tempfactor-tempfactors-vals1] PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_natoms PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_coords PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_dims PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_names PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_residues PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_resnames PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestIncompletePDB::test_reading_trajectory PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_load PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPDBXLSerial::test_serials PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_coordinates PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_distances PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_0 PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_frame_index_1_raises_IndexError PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_full_slice PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_last_slice PASSED [ 14%] 853s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_load_file PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_atoms PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_n_frames PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_numres PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_CRDReader::test_pickle_singleframe_reader PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_ENT PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_coordinates PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_dimensions PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_distances PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_0 PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_frame_index_1_raises_IndexError PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_full_slice PASSED [ 14%] 854s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_last_slice PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_load_file PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_atoms PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_n_frames PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_numres PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_pickle_singleframe_reader PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestPSF_PDBReader::test_uses_PDBReader PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_occupancies PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomname_alignment PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestWriterAlignments::test_atomtype_alignment PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom0- CA ] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom1- OE1] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom2-SE ] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom3-CA ] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom4-FE ] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_deduce_PDB_atom_name[atom5- P ] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_order[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_seekaround[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/cryst_then_model.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.bz2] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::TestCrystModelOrder::test_rewind[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/model_then_cryst.pdb.gz] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_standalone_pdb PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_pdb_zero_atoms PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_atom_not_match PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_partially_missing_cryst PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_no_atoms_elements PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_write_atom_elements PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_elements_roundtrip PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_warning PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_cryst_meaningless_select PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_roundtrip PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_not_int PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[99] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdb.py::test_charges_limit[-100] PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_segid PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_chainID PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_protein PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_backbone PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_neighborhood PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_n_frames PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQT::test_frame PASSED [ 14%] 855s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt] PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.bz2] PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_writing_coords[test.pdbqt.gz] PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_roundtrip_formatting PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_charges PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_write_no_chainids_with_segids PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pdbqt.py::TestPDBQTWriter::test_get_writer PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ArgCACharges PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_ProNCharges PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_coordinates PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_dimensions PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_distances PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_0 PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_frame_index_1_raises_IndexError PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_full_slice PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_hydrogenCharges PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_last_slice PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_load_file PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_atoms PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_n_frames PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_numres PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_pickle_singleframe_reader PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRReader::test_total_charge PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr] PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.bz2] PASSED [ 14%] 856s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_simple_writer_roundtrip[test.pqr.gz] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_writer_noChainID PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_write_withChainID PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriter::test_total_charge PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_names_writing PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_resnames_writing PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_radii_writing PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_pqr.py::TestPQRWriterMissingAttrs::test_no_charges_writing PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_required_attributes PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_close PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_rewind PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_context PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_len PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_raises_StopIteration PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-None-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[2-5-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None-2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-None--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None--1--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-0--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-10-2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-20-2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-5-2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-None--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[None-5--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-10-1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-10-None-1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-5--20] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[5-1-1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[1-5--1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-100-None-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[100-None-None] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[-2-10--2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[0-0-1] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice[10-1-2] PASSED [ 14%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_VE_1 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_slice_TE_1 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl0-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl1-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl2-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl3-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl4-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl5-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem[sl6-array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl0] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl1] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl2] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl3] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl4] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl5] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl6] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl7] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl8] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl9] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len[sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[list] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_len_empty[array] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl20-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl21-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl22-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl23-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl24-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl25-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl26-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl27-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem[sl28-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[0-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[2-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[4-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-1-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-2-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_double_getitem_int[-4-sl15] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_list_TE PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_array_TE PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[5-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl10] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl11] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl12] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl13] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestMultiFrameReader::test_getitem_IE[-6-sl14] PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_required_attributes PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_close PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_context PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_len PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_raises_StopIteration PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_next PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_2 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_getitem_IE_2 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_1 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_slice_2 PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_reopen PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_rewind PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_reader_api.py::TestSingleFrameReader::test_read_frame PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_pytng_not_present_raises PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_parse_n_atoms_no_pytng PASSED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_atoms SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_n_frames SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_double_close SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_ts_dt_matches_reader SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_first_dimensions SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_changing_dimensions SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_volume SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_same_auxname_raises_ValueError SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_auxiliary SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_remove_nonexistant_auxiliary_raises_ValueError SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_aux_attribute SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reload_auxiliaries_from_description SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_stop_iter SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_iter SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_2iter SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_slice SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_switch_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformation_rewind SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_transformations_copy SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_add_another_transformations_raises_ValueError SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_reader SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_frame_collect_all_same SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_go_over_last_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_reopen SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_next_ts_reader SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_pickle_last_ts_reader SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_1 SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGCoordinatesTraj::test_get_writer_2 SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_tng_traj_uneven_blocks SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_atoms SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_n_frames SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_block_names SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_special_blocks SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_blocks SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_initial_frame_is_0 SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_starts_with_first_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_rewind SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_full_slice SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_random_access SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_frame_overrun SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_first_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_first_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_positions_last_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_box_last_frame SKIPPED [ 15%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[0] SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[20] SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[50] SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_step[100] SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_lambda_in_ts SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_box_fail_strange_step SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_read_pos_fail_strange_step SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_additional_block_read_fails SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj::test_parse_n_atoms SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_atoms SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_n_frames SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_block_names SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_special_blocks SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_vels_fail_strange_step SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::TestTNGTraj_vels_forces::test_read_force_fail_strange_step SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_tng.py::test_writer_raises_notimpl SKIPPED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_initial_frame_is_0 PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_positions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dimensions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_frames PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_frame PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_time PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_dt PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_trc_data_step PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_rewind PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_random_access PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderVacuumBox::test_read_frame_reopens PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_trc_dimensions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBox::test_open_twice PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderSolvatedBoxNoConvert::test_trc_dimensions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_dimensions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTriclinicBox::test_trc_distances PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderTruncOctBox::test_universe PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxOrigin::test_universe PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCGenboxEuler::test_universe PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCEmptyFile::test_universe PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_dimensions PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_n_frames PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_frame PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trc.py::TestTRCReaderClusterTrajectory::test_trc_time PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_load_prm PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_n_frames PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_amber_proteinselection PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_starts_with_first_frame PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_rewind PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_full_slice PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_random_access PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestTRJReader::test_read_frame_reopens PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_load_prm PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_n_frames PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_amber_proteinselection PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_sum_centres_of_geometry PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_initial_frame_is_0 PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_starts_with_first_frame PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_rewind PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_full_slice PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_random_access PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReader::test_read_frame_reopens PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_load_prm PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_atoms PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_n_frames PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_periodic PASSED [ 16%] 857s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_amber_proteinselection PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_sum_centres_of_geometry PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_initial_frame_is_0 PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_starts_with_first_frame PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_rewind PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_full_slice PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::TestBzippedTRJReaderPBC::test_random_access PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trj.py::test_trj_no_natoms PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_reader PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::test_deprecated_trz_writer PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_load_trz PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_next_trz PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_rewind_trz PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_n_frames PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_seeking PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_volume PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_unitcell PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_coordinates PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_velocities PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_delta PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_title PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_writer_2 PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_get_wrong_n_atoms PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZReader::test_read_zero_box PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_write_trajectory PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_long_title PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter::test_no_box_warning PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_writer_trz_from_other PASSED [ 16%] 858s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestTRZWriter2::test_no_dt_warning PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_trz.py::TestWrite_Partial_Timestep::test_write_trajectory PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_txyz_positions PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_positions_frame_2 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arc_traj_length PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_arcpbc_traj_length PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_txyz.py::test_pbc_boxsize PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_load_prm PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_atoms PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_n_frames PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_periodic PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_amber_proteinselection PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_sum_centres_of_geometry PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_initial_frame_is_0 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_starts_with_first_frame PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_rewind PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_full_slice PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_random_access PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestTRJReader::test_read_frame_reopens PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_len PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_getting PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_slicing_2 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_position PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_velocity PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_force PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestDLPolyHistory::test_unitcell PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[ascii] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[bz2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_n_atoms[gzip] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[ascii] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[bz2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_length[gzip] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[ascii] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[bz2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_seeking[gzip] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[ascii] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[bz2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_boxsize[gzip] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[ascii] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[bz2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_atom_reordering[gzip] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestLammpsDumpReader::test_warning[u_additional_columns_not_present] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_n_atoms PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_length PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_seeking PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_boxsize PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_atom_reordering PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_true-fields0] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_single-fields1] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_additional_columns[u_additional_columns_multiple-fields2] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_wrong_format_additional_colums[u_additional_columns_wrong_format] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinLammpsDump::test_warning[u_additional_columns_not_present] PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_n_frames PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_rewind PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinPDB::test_slice_iteration PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_len PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_getting PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_slicing_2 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_position PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_velocity PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_force PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinDLPolyHistory::test_unitcell PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_load_prm PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_atoms PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_n_frames PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_periodic PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_amber_proteinselection PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_sum_centres_of_geometry PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_initial_frame_is_0 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_starts_with_first_frame PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_rewind PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_full_slice PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_random_access PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinTRJ::test_read_frame_reopens PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_n_frames PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_windows.py::TestWinARC::test_positions_2 PASSED [ 16%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[CRDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[ChemfilesWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DATAWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter0] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[DCDWriter1] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[FHIAIMSWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[GROWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[H5MDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MOL2Writer] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[MultiPDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NAMDBINWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NCDFWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[NullWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBQTWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[PQRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[TRZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XTCWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_ts_error[XYZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[CRDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[ChemfilesWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DATAWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter0] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[DCDWriter1] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[FHIAIMSWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[GROWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[H5MDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MOL2Writer] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[MultiPDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NAMDBINWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NCDFWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[NullWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBQTWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[PQRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[TRZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XTCWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_atomgroup[XYZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[CRDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[ChemfilesWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DATAWriter] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter0] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[DCDWriter1] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[FHIAIMSWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[GROWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[H5MDWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MOL2Writer] SKIPPED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[MultiPDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NAMDBINWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NCDFWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[NullWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBQTWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PDBWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[PQRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRRWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[TRZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XTCWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_api.py::test_write_with_universe[XYZWriter] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_default_multiframe PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_multiframe_magic2 PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_writer_registration.py::TestWriterCreation::test_singleframe_magic2 PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs0-.foo.xtc_offsets.npz] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[foo.xtc-kwargs1-.foo.xtc_offsets.npz] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_offsets_filename[bar.0001.trr-kwargs2-.bar.0001.trr_offsets.npzzzz] PASSED [ 17%] 859s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_load_new_raises_ValueError PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_Sub::test_sub_coordinates PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_load_new_raises_ValueError PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_Sub::test_sub_coordinates PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_rewind_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_next_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_jump_lastframe_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_slice_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_reverse_xdrtrj PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_coordinates PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_unitcell PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_volume PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_totaltime PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_frame PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_get_Writer PASSED [ 17%] 860s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_Writer PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_EOFraisesStopIteration PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader::test_read_next_timestep_ts_no_positions PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReaderClass::test_with_statement PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_rewind_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_next_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_jump_lastframe_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_slice_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_reverse_xdrtrj PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_coordinates PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_unitcell PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_volume PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_totaltime PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_frame PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_get_Writer PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_Writer PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_EOFraisesStopIteration PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_read_next_timestep_ts_no_positions PASSED [ 17%] 861s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader::test_velocities PASSED [ 17%] 862s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCNoConversion::test_coordinates PASSED [ 17%] 862s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRNoConversion::test_coordinates PASSED [ 17%] 863s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter::test_write_trajectory PASSED [ 17%] 863s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_write_trajectory PASSED [ 17%] 864s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_velocities PASSED [ 17%] 864s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_gaps PASSED [ 17%] 865s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter::test_data_preservation PASSED [ 17%] 865s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_GRO PASSED [ 17%] 866s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_PDB PASSED [ 17%] 866s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterSingleFrame::test_single_frame_CRD PASSED [ 17%] 867s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_GRO PASSED [ 17%] 867s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_PDB PASSED [ 17%] 867s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterSingleFrame::test_single_frame_CRD PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriterIssue117::test_write_trajectory PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriterIssue117::test_write_trajectory PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_triclinic_box PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_atoms PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_n_frames PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_double_close PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_1 PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_writer_2 PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_ts_dt_matches_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_first_dimensions PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_changing_dimensions PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_volume PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_same_auxname_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_auxiliary PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_get_aux_attribute PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reload_auxiliaries_from_description PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_stop_iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_2iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_slice PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_switch_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformation_rewind PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_transformations_copy PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_add_another_transformations_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_frame_collect_all_same PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_go_over_last_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_reopen PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_next_ts_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_2::test_pickle_last_ts_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_different_box PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_selection PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_none PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_no_container PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_write_not_changing_ts PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCWriter_2::test_different_precision PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_atoms PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_n_frames PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_double_close PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_1 PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_writer_2 PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_ts_dt_matches_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_first_dimensions PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_changing_dimensions PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_volume PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_same_auxname_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_auxiliary PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_get_aux_attribute PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reload_auxiliaries_from_description PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_stop_iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_2iter PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_slice PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_switch_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformation_rewind PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_transformations_copy PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_add_another_transformations_raises_ValueError PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_frame_collect_all_same PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_go_over_last_frame PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_reopen PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_next_ts_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_2::test_pickle_last_ts_reader PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_different_box PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_selection PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_none PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_no_container PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_write_not_changing_ts PASSED [ 17%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRWriter_2::test_lambda PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offsets PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_nonexistent_offsets_file PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_corrupted_offsets_file PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_unsupported_format PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_persistent_offsets_readonly PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestXTCReader_offsets::test_offset_lock_created PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offsets PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_nonexistent_offsets_file PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_corrupted_offsets_file PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_io_fails PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_reload_offsets_if_offsets_readin_value_fails PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_size_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_ctime_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_natoms_mismatch PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_last_frame_wrong PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_unsupported_format PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_persistent_offsets_readonly PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::TestTRRReader_offsets::test_offset_lock_created PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xdr.py::test_pathlib PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_atoms PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_n_frames PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_frame PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_close PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_1 PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_writer_2 PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_ts_dt_matches_reader PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_first_dimensions PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_changing_dimensions PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_volume PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_same_auxname_raises_ValueError PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_auxiliary PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_get_aux_attribute PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reload_auxiliaries_from_description PASSED [ 18%] 868s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_stop_iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_2iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_slice PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_switch_frame PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformation_rewind PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_transformations_copy PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_add_another_transformations_raises_ValueError PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_frame_collect_all_same PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_go_over_last_frame PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_reopen PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_next_ts_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_pickle_last_ts_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZReader::test_double_open PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_box PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_none PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_container PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_not_changing_ts PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_selection PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_write_different_models_in_trajectory PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_no_conversion PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[-] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_atoms PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_n_frames PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_frame PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_close PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_1 PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_writer_2 PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_ts_dt_matches_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_first_dimensions PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_changing_dimensions PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_volume PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_same_auxname_raises_ValueError PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_auxiliary PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_remove_nonexistant_auxiliary_raises_ValueError PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_get_aux_attribute PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reload_auxiliaries_from_description PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_stop_iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_2iter PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_slice PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_switch_frame PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformation_rewind PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_transformations_copy PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_add_another_transformations_raises_ValueError PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_frame_collect_all_same PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_go_over_last_frame PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_reopen PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_next_ts_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_pickle_last_ts_reader PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZReader::test_double_open PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_box PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_none PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_container PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_not_changing_ts PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_selection PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_write_different_models_in_trajectory PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_no_conversion PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[Curstom Remark-Curstom Remark] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[-] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::Test_XYZBZWriter::test_remark[None-frame 0 | Written by MDAnalysis XYZWriter (release 2.8.0)] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_no_names PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[elements] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_or_names[names] PASSED [ 18%] 869s testsuite/MDAnalysisTests/coordinates/test_xyz.py::TestXYZWriterNames::test_elements_and_names PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_case_insensitive SKIPPED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_as_method SKIPPED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_kwargs SKIPPED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConvertTo::test_convert_to_lib_method_kwargs SKIPPED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestAccessor::test_access_from_class PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_raises_valueerror PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accessors.py::TestConverterWrapper::test_single_instance SKIPPED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[atoms] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute[segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[atoms] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_different_func[segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-resindices-residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-segindices-segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-molnums-molecules] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[atoms-fragindices-fragments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-resindices-residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-segindices-segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-molnums-molecules] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[residues-fragindices-fragments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-resindices-residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-segindices-segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-molnums-molecules] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_str_attribute_compounds[segments-fragindices-fragments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[atoms] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[residues] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongname[segments] PASSED [ 18%] 869s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[atoms] PASSED [ 18%] 870s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[residues] PASSED [ 18%] 870s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_wrongcomponent[segments] PASSED [ 18%] 870s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[atoms] PASSED [ 18%] 870s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[residues] PASSED [ 18%] 871s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nobonds[segments] PASSED [ 18%] 871s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[atoms] PASSED [ 18%] 871s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_nomolnums[segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[atoms] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute[segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[atoms] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_wrongshape[segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-resindices-residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-segindices-segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-molnums-molecules] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[atoms-fragindices-fragments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-resindices-residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-segindices-segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-molnums-molecules] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[residues-fragindices-fragments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-resindices-residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-segindices-segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-molnums-molecules] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestAccumulate::test_accumulate_array_attribute_compounds[segments-fragindices-fragments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[atoms] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge[segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-resids-residues] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-segids-segments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[atoms-fragindices-fragments] PASSED [ 18%] 872s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-resids-residues] PASSED [ 18%] 873s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-segids-segments] PASSED [ 18%] 873s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[residues-fragindices-fragments] PASSED [ 18%] 873s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-resids-residues] PASSED [ 18%] 873s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-segids-segments] PASSED [ 18%] 873s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_compounds[segments-fragindices-fragments] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[atoms] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[residues] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_charge_duplicates[segments] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[atoms] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[residues] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass[segments] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-resids-residues] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-segids-segments] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[atoms-fragindices-fragments] PASSED [ 18%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-resids-residues] PASSED [ 19%] 874s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-segids-segments] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[residues-fragindices-fragments] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-resids-residues] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-segids-segments] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_compounds[segments-fragindices-fragments] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[atoms] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[residues] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestTotals::test_total_mass_duplicates[segments] PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_com PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_no_center PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_residues_com_coc PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_segment PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_dipole_moment_fragments PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_com PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_coc PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_no_center PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_residues PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_segment PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_accumulate.py::TestMultipole::test_quadrupole_moment_fragments PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_names PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_name PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_type PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attribute_mass PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_setting_attributes_charge PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_attributes_positions PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_selection PASSED [ 19%] 875s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_hierarchy PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bad_add PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_add_AG PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_no_velo PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_bonded_atoms PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_undefined_occupancy PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[1] PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_atom_pickle[-1] PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtom::test_improper_initialisation PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_fail PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_fail PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_velocity_set_fail PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atom.py::TestAtomNoForceNoVel::test_force_set_fail PASSED [ 19%] 876s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_bond PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_angle PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_dihedral PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_improper PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[bond] PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[angle] PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[dihedral] PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupToTopology::test_VE[improper] PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_args PASSED [ 19%] 877s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_raises_unknown_format PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_coordinates PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames0] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames1] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames[frames2] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames0] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames1] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_iterator[frames2] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xtc] PASSED [ 19%] 878s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-dcd] PASSED [ 19%] 879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-pdb] PASSED [ 19%] 879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-xyz] PASSED [ 19%] 879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[-PDB] PASSED [ 19%] 879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xtc] PASSED [ 19%] 879s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-dcd] PASSED [ 19%] 880s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-pdb] PASSED [ 19%] 880s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-xyz] PASSED [ 19%] 881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.gz-PDB] PASSED [ 19%] 881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xtc] PASSED [ 19%] 881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-dcd] PASSED [ 19%] 881s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-pdb] PASSED [ 19%] 882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-xyz] PASSED [ 19%] 882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frame_none[.bz2-PDB] PASSED [ 19%] 882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[] PASSED [ 19%] 882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.gz] PASSED [ 19%] 882s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_all[.bz2] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[invalid] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[8] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[True] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[False] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_frames_invalid[3.2] PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_arguments PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_incompatible_trajectories PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_no_traj_move PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_write_selection PASSED [ 19%] 883s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupWriting::test_bogus_kwarg_pdb PASSED [ 19%] 884s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[] PASSED [ 19%] 884s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.gz] PASSED [ 19%] 885s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_atoms[.bz2] PASSED [ 19%] 886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_empty_atomgroup PASSED [ 19%] 886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[name CA] PASSED [ 19%] 886s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE and resname LEU] PASSED [ 19%] 887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_selection[segid 4AKE] PASSED [ 19%] 887s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Residue PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWritePDB::test_write_Universe PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.gz] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_atoms[.bz2] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_empty_atomgroup PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[name CA] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE and resname LEU] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_selection[segid 4AKE] PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Residue PASSED [ 19%] 888s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestWriteGRO::test_write_Universe PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_translate PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotate PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_rotateby PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_rotation_only PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_only PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTransformations::test_transform_translation_and_rotation PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_1 PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_2 PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_duplicates PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_length PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_wrong_shape PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-fragments-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-molecules-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-residues-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-group-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[False-segments-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-fragments-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-molecules-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-residues-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-group-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-atoms] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-residues] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap[True-segments-segments] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCenter::test_center_unwrap_wrap_true_group PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_atoms PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_residues PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_segments PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestSplit::test_split_VE PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[name-names-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[type-types-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[altLoc-altLocs-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[charge-charges-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[mass-masses-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[radius-radii-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[bfactor-bfactors-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_matches_atom[occupancy-occupancies-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[name-names-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[type-types-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[altLoc-altLocs-string] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[charge-charges-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[mass-masses-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[radius-radii-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[bfactor-bfactors-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_atom_check_ag[occupancy-occupancies-float] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupProperties::test_ag_unique_restore_mask PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atom PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestOrphans::test_atomgroup PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-0] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[0-1] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-0] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_add_mixed_universes[1-1] PASSED [ 19%] 889s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestCrossUniverse::test_adding_empty_ags PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs0-names0] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs1-names1] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selection_name[kwargs2-names2] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_single PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_empty PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs0-names0] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs1-names1] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_selections_name[kwargs2-names2] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs0-names0] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs1-names1] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selection_name[kwargs2-names2] PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_single PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_empty PASSED [ 19%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs0-names0] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs1-names1] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_selections_name[kwargs2-names2] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs0-names0] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs1-names1] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selection_name[kwargs2-names2] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_empty PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_single PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs0-names0] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs1-names1] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_selections_name[kwargs2-names2] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs0-names0] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs1-names1] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs2-names2] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_name[kwargs3-names3] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_single PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_empty PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[CYS] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[ILE] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[SER] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[THR] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selections_non_cg[VAL] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[CYSH] PASSED [ 20%] 890s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[ILE] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[SER] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[THR] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_gromacs[VAL] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[CYS] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[ILE] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[SER] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[THR] PASSED [ 20%] 891s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_non_cg_charmm[VAL] PASSED [ 20%] 892s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ARG] PASSED [ 20%] 892s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ASP] PASSED [ 20%] 892s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[CYS] PASSED [ 20%] 893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLN] PASSED [ 20%] 893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[GLU] PASSED [ 20%] 893s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[HIS] PASSED [ 20%] 894s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[ILE] PASSED [ 20%] 894s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LEU] PASSED [ 20%] 894s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[LYS] PASSED [ 20%] 895s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[MET] PASSED [ 20%] 895s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PHE] PASSED [ 20%] 895s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[PRO] PASSED [ 20%] 896s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[SER] PASSED [ 20%] 896s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[THR] PASSED [ 20%] 897s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TRP] PASSED [ 20%] 897s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[TYR] PASSED [ 20%] 897s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_selection_all_res[VAL] PASSED [ 20%] 897s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[ALA] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_no_chi1[GLY] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sel_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_sels_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sel_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_sels_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sel_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_sels_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_ch1_sel_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_sels_fail PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_phi PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_psi PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_omega PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_dihedral_chi1 PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_phi_nodep PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_psi_nodep PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_omega_nodep PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestDihedralSelections::test_chi1_nodep PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_geometry-False-ref1] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-center_of_mass-False-ref1] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-moment_of_inertia-False-ref1] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-asphericity-False-ref1] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[False-shape_parameter-False-ref1] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-True-ref0] PASSED [ 20%] 898s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_geometry-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-center_of_mass-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-moment_of_inertia-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-asphericity-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_residues[True-shape_parameter-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_geometry-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[center_of_mass-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[moment_of_inertia-False-ref1] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-True-ref0] PASSED [ 20%] 899s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestUnwrapFlag::test_group[asphericity-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_geometry-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[center_of_mass-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[radius_of_gyration-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[shape_parameter-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[asphericity-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[moment_of_inertia-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bbox-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[bsphere-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-True-ref0] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestPBCFlag::test_wrap[principal_axes-False-ref1] PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_int PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_slice2 PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_getitem_IE PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_make PASSED [ 20%] 900s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_invalid_index_initialisation PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_atoms PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_residues PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_residues PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_n_segments PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_zero_atoms_segments PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_dim PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_dim PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_dim PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_len PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_geometry PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_of_mass PASSED [ 20%] 901s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_geometry] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_duplicates[center_of_mass] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_geometry] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[resids-residues-center_of_mass] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_geometry] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds[segids-segments-center_of_mass] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_geometry] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-resids-residues-center_of_mass] PASSED [ 20%] 902s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_geometry] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[True-segids-segments-center_of_mass] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_geometry] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-resids-residues-center_of_mass] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_geometry] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_pbc[False-segids-segments-center_of_mass] PASSED [ 20%] 903s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_geometry] PASSED [ 20%] 904s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[molnums-molecules-center_of_mass] PASSED [ 20%] 904s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_geometry] PASSED [ 20%] 905s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special[fragindices-fragments-center_of_mass] PASSED [ 20%] 906s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_geometry] PASSED [ 20%] 907s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-molnums-molecules-center_of_mass] PASSED [ 20%] 908s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_geometry] PASSED [ 20%] 910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[True-fragindices-fragments-center_of_mass] PASSED [ 20%] 910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_geometry] PASSED [ 20%] 910s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-molnums-molecules-center_of_mass] PASSED [ 20%] 911s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_geometry] PASSED [ 20%] 912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_pbc[False-fragindices-fragments-center_of_mass] PASSED [ 20%] 912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_wrong_compound PASSED [ 20%] 912s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[molecules] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_special_fail[fragments] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-None] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights1] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-group-weights2] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-None] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights1] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-residues-weights2] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-None] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights1] PASSED [ 20%] 913s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-segments-weights2] PASSED [ 20%] 914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-None] PASSED [ 20%] 914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights1] PASSED [ 20%] 914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-molecules-weights2] PASSED [ 20%] 914s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-None] PASSED [ 20%] 915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights1] PASSED [ 20%] 915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[False-fragments-weights2] PASSED [ 20%] 915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-None] PASSED [ 20%] 915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights1] PASSED [ 20%] 915s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-group-weights2] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-None] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights1] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-residues-weights2] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-None] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights1] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-segments-weights2] PASSED [ 20%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-None] PASSED [ 21%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights1] PASSED [ 21%] 916s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-molecules-weights2] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-None] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights1] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_single[True-fragments-weights2] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-False] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-None-True] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-False] PASSED [ 21%] 917s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[group-weights1-True] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-False] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-None-True] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-False] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[residues-weights1-True] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-False] PASSED [ 21%] 918s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-None-True] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-False] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[segments-weights1-True] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-False] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-None-True] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-False] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[molecules-weights1-True] PASSED [ 21%] 919s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-False] PASSED [ 21%] 920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-None-True] PASSED [ 21%] 920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-False] PASSED [ 21%] 920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_empty[fragments-weights1-True] PASSED [ 21%] 920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-False] PASSED [ 21%] 920s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[-group-True] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-False] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[resids-residues-True] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-False] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[segids-segments-True] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-False] PASSED [ 21%] 921s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[molnums-molecules-True] PASSED [ 21%] 923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-False] PASSED [ 21%] 923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_center_compounds_zero_weights[fragindices-fragments-True] PASSED [ 21%] 923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_coordinates PASSED [ 21%] 923s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_principal_axes_duplicates PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_moment_of_inertia_duplicates PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_radius_of_gyration_duplicates PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_indices PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resids PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnums PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_resnames PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_names PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_segids PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses_ndarray PASSED [ 21%] 924s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_masses PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges_ndarray PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_charges PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bad_add_AG PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_false PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_true PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_repr PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resnum_single PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_resname_single PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_badshape PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox_noshape PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_packintobox PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_residues PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_integer PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice PASSED [ 21%] 925s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_slice_empty PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_index_advancedslice PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_2d_indexing_caught PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel0] PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_boolean_indexing_2[sel1] PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bool_IE PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_ValueError PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_improper PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_dihedral_equals_improper PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_pbc PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_bond_ValueError PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_angle_ValueError PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_shape_parameter_duplicates PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity PASSED [ 21%] 926s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_asphericity_duplicates PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_positions PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_set_names PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroup::test_atom_order PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupTimestep::test_partial_timestep PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ix] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[ids] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[resids] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[segids] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[charges] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[masses] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort[tempfactors] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_bonds PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_positions_2D PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position_no_keyfunc PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupSort::test_sort_position PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[name CA] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomgroup.py::TestAtomGroupPickle::test_atomgroup_pickle[segid 4AKE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_segid PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ACE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALA] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ALAD] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARG] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ARGN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASF] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASN1] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ASPH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CALA] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CARG] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASF] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CASP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CCYX] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLU] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CGLY] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHID] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CHIP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CILE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLEU] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CLYS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CME] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CMET] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPHE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CPRO] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CSER] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTHR] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTRP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CTYR] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CVAL] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYM] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS1] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYS2] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYSH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[CYX] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[DAB] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLU] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLUH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[GLY] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HID] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS1] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HIS2] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISA] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISB] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISD] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HISH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSD] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HSP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[HYP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ILE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LEU] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[LYSH] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MET] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[MSE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NALA] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NARG] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NASP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYS] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NCYX] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLN] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLU] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NGLY] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHID] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIE] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NHIP] PASSED [ 21%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NILE] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLEU] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NLYS] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NME] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NMET] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPHE] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NPRO] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NSER] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTHR] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTRP] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NTYR] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[NVAL] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[ORN] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PGLU] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PHE] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[PRO] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[QLN] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[SER] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[THR] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TRP] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[TYR] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_protein_resnames[VAL] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_backbone PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_single PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resid_range PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_selgroup PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_fullselgroup PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_single PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resnum_range PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_resname PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_name PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_atom_empty PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_type PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_and PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_or PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_not PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 bynum 1943] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_around[around 4.0 index 1942] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 bynum 1281] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphlayer[sphlayer 4.0 6.0 index 1280] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 bynum 1281] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_isolayer[isolayer 4.0 6.0 index 1280] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 bynum 1281] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_sphzone[sphzone 6.0 index 1280] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 bynum 1281] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cylayer[cylayer 4.0 6.0 10 -10 index 1280] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cylayer PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 bynum 1281] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_cyzone[cyzone 6.0 10 -10 index 1280] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_cyzone PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_point PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_prop PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_bynum PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_index PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres bynum 0:5-19] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_byres[byres index 0:19-43] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_resname PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_same_segment PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_same PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_empty_selection PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_parenthesized_expression PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_no_space_around_parentheses PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_concatenated_selection PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_global PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T*R] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN GLN-resname *N] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP-resname AS*] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname TYR THR-resname T?R] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname ASN ASP HSD-resname *S?] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname LEU LYS-resname L**] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname MET-resname *M*] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLN GLY-resname GL[NY]] PASSED [ 22%] 927s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsCHARMM::test_wildcard_selection[resname GLU-resname GL[!NY]] PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_protein PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_backbone PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsAMBER::test_type PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_protein PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_resid_single PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNAMD::test_type PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_protein PASSED [ 22%] 928s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_backbone PASSED [ 22%] 929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_resid_single PASSED [ 22%] 929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 or bynum 10] PASSED [ 22%] 929s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as bynum 1 10] PASSED [ 22%] 930s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 or index 9] PASSED [ 22%] 930s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_same_coordinate[same x as index 0 9] PASSED [ 22%] 930s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 bynum 3554] PASSED [ 22%] 931s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cylayer[cylayer 10 20 20 -20 index 3553] PASSED [ 22%] 931s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 bynum 3554] PASSED [ 22%] 931s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsGRO::test_cyzone[cyzone 20 20 -20 index 3553] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as bynum 1] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_same_fragment[same fragment as index 0] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_moltype PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 1-reference0] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsTPR::test_molnum[molnum 2:4-reference1] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[aromatic-5] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[not aromatic-1] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type N and aromatic-1] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_aromatic_selection[type C and aromatic-4] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts n-indices0] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [#7]-indices1] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a-indices2] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts c-indices3] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [*-]-indices4] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([!#1]);$([!R][R])]-indices5] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@H](-[CH2])(-[O-])-C=O)]-indices6] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts [$([C@@H](-[CH2])(-[O-])-C=O)]-indices7] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type C-indices8] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[(smarts a) and (type C)-indices9] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_smarts_selection[smarts a and type N-indices10] SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_invalid_smarts_sel_raises_error SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_rdkit_kwargs_to_converter SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_max_matches_to_converter SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionRDKit::test_passing_use_chirality_to_converter SKIPPED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleic_all PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbackbone PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicbase PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionsNucleicAcids::test_nucleicsugar PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[True] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_around[False] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[True] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_layer[False] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[True] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_isolayer[False] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[True] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_spherical_zone[False] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[True] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_point[False] PASSED [ 22%] 932s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-True] PASSED [ 22%] 933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_cyzone[distmat-False] PASSED [ 22%] 933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[True-33] PASSED [ 22%] 933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestOrthogonalDistanceSelections::test_sphzone[False-25] PASSED [ 22%] 933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[True] PASSED [ 22%] 933s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_around[False] PASSED [ 22%] 934s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[True] PASSED [ 22%] 934s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_layer[False] PASSED [ 22%] 934s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[True] PASSED [ 22%] 935s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_isolayer[False] PASSED [ 22%] 935s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[True] PASSED [ 22%] 935s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_spherical_zone[False] PASSED [ 22%] 936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[True] PASSED [ 22%] 936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicDistanceSelections::test_point[False] PASSED [ 22%] 936s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_around PASSED [ 22%] 937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphlayer PASSED [ 22%] 937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphlayer PASSED [ 22%] 937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_isolayer PASSED [ 22%] 937s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_sphzone PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_empty_sphzone PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_1 PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestTriclinicSelections::test_point_2 PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass < 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass <1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass< 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-mass-prop mass<1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge < 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge <1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge< 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag0-charge-prop charge<1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass < 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass <1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass< 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-mass-prop mass<1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge < 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge <1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge< 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_lt[ag1-charge-prop charge<1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass <=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-mass-prop mass<=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge <=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag0-charge-prop charge<=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass <=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-mass-prop mass<=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge <=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<= 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_le[ag1-charge-prop charge<=1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass > 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass >1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass> 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-mass-prop mass>1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge > 1.5] PASSED [ 22%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge >1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge> 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag0-charge-prop charge>1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass > 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass >1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass> 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-mass-prop mass>1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge > 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge >1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge> 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_gt[ag1-charge-prop charge>1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass >=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-mass-prop mass>=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge >=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag0-charge-prop charge>=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass >=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-mass-prop mass>=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge >=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ge[ag1-charge-prop charge>=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass == 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass ==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass== 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-mass-prop mass==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge == 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge ==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge== 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag0-charge-prop charge==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass == 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass ==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass== 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-mass-prop mass==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge == 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge ==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge== 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_eq[ag1-charge-prop charge==1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass != 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass !=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-mass-prop mass!=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge != 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge !=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag0-charge-prop charge!=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass != 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass !=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-mass-prop mass!=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge != 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge !=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!= 1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_ne[ag1-charge-prop charge!=1.5] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-<=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass->=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-==] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-mass-!=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-<=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge->=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-==] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag0-charge-!=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-<=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass->=] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-==] PASSED [ 23%] 938s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-mass-!=] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-<=] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge->=] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-==] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestPropSelection::test_flip[ag1-charge-!=] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_bonded_1 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestBondedSelection::test_nobonds_warns PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name and H] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name )] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid abcd] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum 7a7] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid 1-] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken == tasty] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop chicken <= 7.4] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass ^^ 12.0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same this as resid 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[same resid resname mass 5.0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[name H and] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[naem H] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resid and name C] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[resnum ] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[bynum or protein] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[index or protein] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass < 4.0 hello] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[prop mass > 10. and group this] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0 to] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass to 3.0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1.0:] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass :3.0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[mass 1-] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[chirality ] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_selection_fail[formalcharge 0.2] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestSelectionErrors::test_invalid_prop_selection PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_segid_and_resid PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameABA or name NameACA or name NameADA-name NameABA NameACA NameADA] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[type TypeE or type TypeD or type TypeB-type TypeE TypeD TypeB] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[resname RsC or resname RsY-resname RsC RsY] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[name NameAB* or name NameACC-name NameAB* NameACC] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[segid SegA or segid SegC-segid SegA SegC] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_string_selections[(name NameABC or name NameABB) and (resname RsD or resname RsF)-name NameABC NameABB and resname RsD RsF] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 2-{typ} 1 2-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 22-{typ} 1:10 22-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1:10 or {typ} 20:30-{typ} 1:10 20:30-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7-{typ} 1-5 7-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1-5 or {typ} 7:10 or {typ} 12-{typ} 1-5 7:10 12-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resid] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-resnum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-bynum] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestImplicitOr::test_range_selections[{typ} 1 or {typ} 3 or {typ} 5:10-{typ} 1 3 5:10-index] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_resid_implicit_icode PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_1 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_2 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_3 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_4 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_select_icode_range_5 PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_VE PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::TestICodeSelection::test_missing_icodes_range_VE PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same residue as -11] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[same resid as-72] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_similarity_selection_icodes[byres-11] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[all] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[protein] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[backbone] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleic] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[nucleicbackbone] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name O] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[name N*] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname stuff] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resname ALA] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[type O] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[index 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[bynum 1-10] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[segid SYSTEM] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 163] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resid 1-10] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[resnum 2] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[around 10 resid 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[point 0 0 0 10] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphzone 10 resid 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[sphlayer 0 10 index 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cyzone 15 4 -8 index 0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[cylayer 5 10 10 -8 index 1] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[prop abs z <= 100] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[byres index 0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_selections_on_empty_group[same resid as index 0] PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_yet_global PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_arbitrary_atom_group_raises_error PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_empty_sel PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_record_type_sel PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_element_sel PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chain_sel PASSED [ 23%] 939s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.8 to 1.2-23844-selkwargs0] PASSED [ 23%] 940s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 8e-1 to 1200e-3-23844-selkwargs1] PASSED [ 23%] 941s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5--3-2-selkwargs2] PASSED [ 24%] 941s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -3 : -5-0-selkwargs3] PASSED [ 24%] 941s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 --3-2-selkwargs4] PASSED [ 24%] 941s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5- -3-2-selkwargs5] PASSED [ 24%] 942s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -5 - -3-2-selkwargs6] PASSED [ 24%] 942s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10:3-34945-selkwargs7] PASSED [ 24%] 942s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 :3-34945-selkwargs8] PASSED [ 24%] 942s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10: 3-34945-selkwargs9] PASSED [ 24%] 942s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 : 3-34945-selkwargs10] PASSED [ 24%] 943s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass -10 -3-0-selkwargs11] PASSED [ 24%] 943s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs12] PASSED [ 24%] 943s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-5-selkwargs13] PASSED [ 24%] 943s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 - 0.30000000000000004-10-selkwargs14] PASSED [ 24%] 943s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-5-selkwargs15] PASSED [ 24%] 944s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-5-selkwargs16] PASSED [ 24%] 945s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3-10-selkwargs17] PASSED [ 24%] 945s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.30000000000000004-10-selkwargs18] PASSED [ 24%] 945s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[mass 0.3 0.30000000000000001-10-selkwargs19] PASSED [ 24%] 945s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.3-10-selkwargs20] PASSED [ 24%] 946s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-10-selkwargs21] PASSED [ 24%] 946s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel[prop mass == 0.30000000000000004-5-selkwargs22] PASSED [ 24%] 946s testsuite/MDAnalysisTests/core/test_atomselections.py::test_mass_sel_warning PASSED [ 24%] 946s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -10 to 3-13] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -5--3-3] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_int_sel[resnum -3 : -5-0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_negative_resid PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity-5] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity true-5] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[not aromaticity-15] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel[aromaticity False-15] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_bool_sel_error SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_error_selection_for_strange_dtype PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[name N-ix0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_default_selection_on_ordered_unique_group[resname GLU-ix1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-True-ix0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[name N-False-ix1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-True-ix2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_unique_group[resname GLU-False-ix3] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-True-ix0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[name N-False-ix1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-True-ix2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_unique_selection_on_ordered_group[resname GLU-False-ix3] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@@H](C(=O)O)N-S] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality[C[C@H](C(=O)O)N-R] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R-1] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S-1] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[R S-2] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_chirality_selection[S R-2] SKIPPED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[1-1-NH2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1-1-OD2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[0-34-N] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_atomselections.py::test_formal_charge_selection[-1 1-2-OD2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_size_independent PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_AR] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[RA] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[_RS] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR[SR] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_AR] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[RA] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[_RS] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_AR_independent[SR] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_atom PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestTransTableCopy::test_move_residue PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA2] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA3] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA4] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA5] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA6] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA7] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA8] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA9] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA10] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA11] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA12] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA13] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA14] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA15] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA16] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA17] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA18] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA19] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_copy_attr[refTA20] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_n_attrs PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[names] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[masses] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[resids] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[bonds] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_topology_copy_unique_attrs[tt] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_universe_copy PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_positions PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_positions PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_topology PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::TestCopyUniverse::test_change_topology PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_copying.py::test_pdb_copy PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_total_frags[u1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_external_ordering[u1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_frag_internal_ordering[u1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_access[u1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u0] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_access[u1] PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_empty_atomgroup_access PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragments_nobonds_NDE PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atom_fragment_nobonds_NDE PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_making PASSED [ 24%] 947s testsuite/MDAnalysisTests/core/test_fragments.py::TestFragments::test_atomgroup_fragment_cache_invalidation_bond_breaking PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_fragments.py::test_tpr_fragments PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_access[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_positions_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_velocities_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atomgroup_forces_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_position_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_velocity_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-False] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-False-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupTrajAccess::test_atom_force_setting[True-True-True] PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_get PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_get PASSED [ 24%] 949s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_force_set PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_atom_velocity_set PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_pos_iteration PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_vel_iteration PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtom_ForceVelocity::test_for_iteration PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestGROVelocities::testParse_velocities PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForces::testForces PASSED [ 24%] 950s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestTRRForcesNativeUnits::testForces PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_get_velocities PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_velocities PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupVelocities::test_set_velocities PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_get_forces PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_forces PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_group_traj_access.py::TestAtomGroupForces::test_set_forces PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_dimensions PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group0] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group1] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_isunique[group2] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group0] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group1] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_nocache[group2] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group0] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group1] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_create_unique_group_from_unique[group2] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup0] PASSED [ 24%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix0-unique_ix0-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_unique_returns_sorted_copy[ix1-unique_ix1-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix0-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix1-True-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_issorted[ix2-True-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix0-True-unique_ix0-True-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix1-False-unique_ix1-True-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix2-True-unique_ix2-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix3-False-unique_ix3-True-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix4-True-unique_ix4-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix5-False-unique_ix5-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix6-True-unique_ix6-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_asunique[ix7-False-unique_ix7-False-ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_sorted_unsorted_unique[ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupProperties::test_group_return_unsorted_sorted_unique[ugroup2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_passive_decorator[ag0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestEmptyAtomGroup::test_error_empty_group[ag0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_atoms[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_residues[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_n_segments[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_len[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[atom-array] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[residue-array] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_boolean_slicing[segment-array] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_indexerror[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl0-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl1-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl2-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl3-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl4-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl5-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl6-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl7-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl8-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl9-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl10-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl11-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl12-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[atom-sl13-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl0-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl1-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl2-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl3-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl4-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl5-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl6-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl7-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl8-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl9-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl10-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl11-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl12-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[residue-sl13-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl0-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl1-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl2-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl3-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl4-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl5-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl6-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl7-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl8-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl9-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl10-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl11-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl12-list] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_slice[segment-sl13-] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom-1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[atom--2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue-1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[residue--2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-0] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment-1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--1] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_integer_getitem[segment--2] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupSlicing::test_none_getitem[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a0-b0-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a1-b1-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a2-b2-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a3-b3-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a4-b4-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a5-b5-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a6-b6-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a7-b7-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a8-b8-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a9-b9-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a10-b10-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_addition[a11-b11-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a0-b0-c0-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a1-b1-c1-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a2-b2-c2-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a3-b3-c3-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a4-b4-c4-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a5-b5-c5-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a6-b6-c6-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a7-b7-c7-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a8-b8-c8-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a9-b9-c9-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a10-b10-c10-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a11-b11-c11-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a12-b12-c12-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a13-b13-c13-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a14-b14-c14-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a15-b15-c15-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a16-b16-c16-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a17-b17-c17-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a18-b18-c18-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a19-b19-c19-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a20-b20-c20-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a21-b21-c21-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a22-b22-c22-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_sum[a23-b23-c23-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a0-b0-c0-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a1-b1-c1-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a2-b2-c2-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a3-b3-c3-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a4-b4-c4-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a5-b5-c5-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a6-b6-c6-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a7-b7-c7-AtomGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a8-b8-c8-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a9-b9-c9-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a10-b10-c10-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a11-b11-c11-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a12-b12-c12-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a13-b13-c13-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a14-b14-c14-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a15-b15-c15-ResidueGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a16-b16-c16-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a17-b17-c17-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a18-b18-c18-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a19-b19-c19-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a20-b20-c20-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a21-b21-c21-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a22-b22-c22-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_bad_sum[a23-b23-c23-SegmentGroup] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains[segment] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[atom] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[residue] PASSED [ 25%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_false[segment] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-residue] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[atom-segment] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-atom] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[residue-segment] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-atom] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_contains_wronglevel[segment-residue] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a0-b0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a1-b1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a2-b2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a3-b3] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a4-b4] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a5-b5] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a6-b6] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a7-b7] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a8-b8] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a9-b9] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a10-b10] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a11-b11] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a12-b12] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a13-b13] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a14-b14] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a15-b15] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a16-b16] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a17-b17] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a18-b18] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a19-b19] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a20-b20] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a21-b21] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a22-b22] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupAddition::test_crosslevel[a23-b23] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_atomgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_residuegroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_segmentgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_residue PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atom_to_segment PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_atomgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residue_to_segment PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_atomgroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segment_to_residuegroup PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_residuegroup_unique PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_atomgroup_to_segmentgroup_unique PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_segmentgroup_unique PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_residuegroup_to_atomgroup_listcomp PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_residuegroup_listcomp PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupLevelTransition::test_segmentgroup_to_atomgroup_listcomp PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_lt[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_gt[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_ge[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_le[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_neq[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_eq[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_sorting[abc2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x0-y0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x1-y1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x2-y2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x3-y3] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x4-y4] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_cmp[x5-y5] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x0-y0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x1-y1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x2-y2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x3-y3] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x4-y4] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestComponentComparisons::test_crosslevel_eq[x5-y5] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestMetaclassMagic::test_new_class PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids0] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids1] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string[segids2] PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_float_string PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_int_float PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBy::test_groupby_string_int PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atom_repr PASSED [ 26%] 951s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residue_repr PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segment_repr PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_repr PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_short PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_atomgroup_str_long PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_repr PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_short PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_residuegroup_str_long PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_repr PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestReprs::test_segmentgroup_str PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len[segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_len_duplicated_and_scrambled[segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_equal[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group0] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group1] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_copy[group2] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issubset[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_subset[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_issuperset[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_is_strict_superset[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_concatenate[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_union[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_intersection[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_subtract[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_difference[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_symmetric_difference[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[simple-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-atoms] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-residues] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_isdisjoint[scrambled-segments] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left0-right0] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left1-right1] PASSED [ 26%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left2-right2] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left3-right3] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left4-right4] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left5-right5] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left6-right6] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left7-right7] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left8-right8] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left9-right9] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left10-right10] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left11-right11] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left12-right12] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left13-right13] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left14-right14] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left15-right15] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left16-right16] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left17-right17] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left18-right18] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left19-right19] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left20-right20] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left21-right21] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left22-right22] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left23-right23] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_failing_pairs[left24-invalid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left0-right0] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left1-right1] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left2-right2] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left3-right3] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left4-right4] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left5-right5] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left6-right6] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left7-right7] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left8-right8] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left9-right9] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left10-right10] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_succeeding_pairs[left11-right11] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_only_same_level_different_universes PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-add-concatenate] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-sub-difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-and_-intersection] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-or_-union] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[atoms-xor-symmetric_difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-add-concatenate] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-sub-difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-and_-intersection] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-or_-union] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[residues-xor-symmetric_difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-add-concatenate] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-sub-difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-and_-intersection] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-or_-union] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupBaseOperators::test_shortcut_overriding[segments-xor-symmetric_difference] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_exists[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_equality[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[atoms-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[residues-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_difference_cross[segments-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestGroupHash::test_hash_diff_cross_universe[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAtomGroup::test_PDB_atom_repr PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_group_fail[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_setting_component_fails[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-name] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-resid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[atoms-segid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-name] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-resid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[residues-segid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-name] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-resid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_group_set_singular[segments-segid] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_name PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_resid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_atom_set_segid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_name PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_resid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_residue_set_segid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_name PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_resid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_segment_set_segid PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-names] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-resids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[atoms-segids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-names] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-resids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[residues-segids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-names] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-resids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeSetting::test_component_set_plural[segments-segids] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[masses] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_group[altLocs] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[mass] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_present_topattr_component[altLoc] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[masses-mass] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_plural_topattr_from_component[altLocs-altLoc] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[masses-mass] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_sing_topattr_from_group[altLocs-altLoc] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[elements-element] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[tempfactors-tempfactor] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_topattr_group[bonds-bonds] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_non_topattr PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_unwrap_without_bonds PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attr_method PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_get_absent_attrprop PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrprop_wrong_group PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_attrmethod_wrong_group PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[altlocs] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestAttributeGetting::test_wrong_name[alt_Locs] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_object_init[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_number_init[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[atoms] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestInitGroup::test_VE_no_uni_2[segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-True-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[True-False-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-True-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap_deprecation[False-False-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-True-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[True-False-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-True-segments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-fragments] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-molecules] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-residues] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-group] PASSED [ 27%] 952s testsuite/MDAnalysisTests/core/test_groups.py::TestDecorator::test_wrap_and_unwrap[False-False-segments] PASSED [ 27%] 953s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[bonds] PASSED [ 27%] 953s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[angles] PASSED [ 27%] 953s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[dihedrals] PASSED [ 27%] 954s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_not_outside[impropers] PASSED [ 27%] 954s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[bonds-1] PASSED [ 27%] 955s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[angles-3] PASSED [ 27%] 955s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atom_outside[dihedrals-4] PASSED [ 27%] 955s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[bonds-9] PASSED [ 27%] 956s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[angles-15] PASSED [ 27%] 956s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_not_outside[dihedrals-12] PASSED [ 27%] 957s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[bonds-13] PASSED [ 27%] 957s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[angles-27] PASSED [ 27%] 957s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_connection_from_atoms_outside[dihedrals-38] PASSED [ 27%] 958s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_invalid_connection_error PASSED [ 27%] 958s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[True] PASSED [ 28%] 959s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsAtoms::test_get_empty_group[False] PASSED [ 28%] 959s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[bonds-9] PASSED [ 28%] 959s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[angles-14] PASSED [ 28%] 960s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[dihedrals-9] PASSED [ 28%] 960s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_not_outside[impropers-0] PASSED [ 28%] 961s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[bonds-11] PASSED [ 28%] 961s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[angles-22] PASSED [ 28%] 961s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[dihedrals-27] PASSED [ 28%] 962s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_res_outside[impropers-0] PASSED [ 28%] 962s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[bonds-157] PASSED [ 28%] 963s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[angles-290] PASSED [ 28%] 963s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_not_outside[dihedrals-351] PASSED [ 28%] 964s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[bonds-158] PASSED [ 28%] 964s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[angles-294] PASSED [ 28%] 964s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_connection_from_residues_outside[dihedrals-360] PASSED [ 28%] 965s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_invalid_connection_error PASSED [ 28%] 965s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[True] PASSED [ 28%] 965s testsuite/MDAnalysisTests/core/test_groups.py::TestGetConnectionsResidues::test_get_empty_group[False] PASSED [ 28%] 966s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_bonds-9] PASSED [ 28%] 966s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_angles-15] PASSED [ 28%] 967s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_inside[intra_dihedrals-12] PASSED [ 28%] 967s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[bonds-13] PASSED [ 28%] 967s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[angles-27] PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_groups.py::test_topologygroup_gets_connections_outside[dihedrals-38] PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_ag_ix PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_rg_ix PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_sg_ix PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atom_ix_array PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residue_ix_array PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segment_ix_array PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_indices PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_residue_upshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_atomgroup_segment_upshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_atom_downshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_resindices PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_residuegroup_segment_upshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_atom_downshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_residue_downshift PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_index_dtype.py::test_segmentgroup_segindices PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_singular PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_failure_multiple PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_requires_success PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_requires.py::TestRequires::test_failure_errormessage PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_residue.py::test_type PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_residue.py::test_index PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_residue.py::test_atom_order PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_residue.py::test_residue_pickle PASSED [ 28%] 968s testsuite/MDAnalysisTests/core/test_residuegroup.py::test_sequence_import_error SKIPPED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_string PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_SeqRecord_default PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_Seq PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_nonIUPACresname_VE PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestSequence::test_format_TE PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_newResidueGroup PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_atoms PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_n_residues PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resids_dim PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_resnums_dim PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_segids_dim PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_len PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resids_updates_self PASSED [ 28%] 969s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_single PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_many PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resnum_ValueError PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_single SKIPPED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_many SKIPPED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_resname_ValueError SKIPPED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_merge_residues SKIPPED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_set_masses SKIPPED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_atom_order PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_next_residue PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_get_prev_residue PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[name CA] PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_residuegroup.py::TestResidueGroup::test_residuegroup_pickle[segid 4AKE] PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_type PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_index PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_slicing PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_advanced_slicing PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_atom_order PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[1] PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segment.py::TestSegment::test_residue_pickle[-1] PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_newSegmentGroup PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_atoms PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_n_residues PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resids_dim PASSED [ 28%] 970s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_resnums_dim PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segids_dim PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segid_updates_ PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_set_segids_many PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_atom_order PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_segmentgroup.py::test_segmentgroup_pickle PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_a2r PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_1d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2a_2d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_r2s PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_1d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2r_2d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_1d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_s2a_2d PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_atom_simple PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_move_residue_simple PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_RA PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_lazy_building_SR PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTransTable::test_serialization PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_single_residue PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residuegroup_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_residue_list_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residuegroup_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_residue_list_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_list_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atom_segment_NIE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_atomgroup_segment_NIE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_single_segment PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segment_list PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_segmentgroup_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_list_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_segmentgroup_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residue_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestLevelMoves::test_move_residuegroup_list_TE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_square PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_downshift_dtype_ragged PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_square PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_shape_ragged PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_square PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_contents_ragged PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_intra_values_2 PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_end_values_2 PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestDownshiftArrays::test_missing_start_values_2 PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_segment_no_attrs PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_residue_no_attrs_one_segment PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_ambiguous_segment_NDE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_missing_attr_NDE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_NDE_message_2 PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Residue_with_attrs PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_missing_attr_NDE_Segment PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_NDE_message PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestAddingResidues::test_add_Segment_with_attr PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_guessed PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyGuessed::test_read PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_make_topology_no_attrs PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_resindex_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topology.py::TestTopologyCreation::test_segindex_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_len PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atom_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_atoms PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_singular PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_plural PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_set_atoms_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_residues PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomAttr::test_get_segments PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_len PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atom_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_atoms PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_singular PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_plural PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_set_atoms_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_residues PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomids::test_get_segments PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_atom_indices PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_residue_indices PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestIndicesClasses::test_cant_set_segment_indices PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_len PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atom_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_atoms PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_singular PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_plural PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_set_atoms_VE PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_residues PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_get_segments PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_prev_emptyresidue PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_next_emptyresidue PASSED [ 28%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_values PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAtomnames::test_missing_value_label PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atom_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_set_atoms_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_get_segment PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestMasses::test_missing_masses PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atom_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_set_atoms_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCharges::test_get_segment PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residue_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_atom PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_set_residues_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResidueAttr::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residue_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_atom PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_set_residues_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResnames::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residue_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_atom PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_set_residues_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestICodes::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residue_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_atom PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_atoms XFAIL [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestResids::test_set_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_len PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segment_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_atoms PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_residues PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_get_segments PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_singular PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_plural PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestSegmentAttr::test_set_segments_VE PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_principal_axes_handedness PASSED [ 29%] 971s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_self PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestAttr::test_align_principal_axes_with_x PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-0-level0] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-1-level1] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[0-names-2-level2] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-0-level0] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-1-level1] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[1-resids-2-level2] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-0-level0] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-1-level1] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestCrossLevelAttributeSetting::test_set_crosslevel[2-segids-2-level2] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_record_types_default PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_encoding PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_residue_record_types PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestRecordTypes::test_segment_record_types PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_static_typing_from_empty PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_mass] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-center_of_charge] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[atoms-total_charge] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_methods[residues-total_charge] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[universe-models] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_stub_transplant_property[atoms-n_fragments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::test_warn_selection_for_strange_dtype PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_group PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_get_atom PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_group PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactors_set_atom PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestDeprecateBFactor::test_deprecate_bfactor_sel PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResA] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_residue[ResB] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegA] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_add_segment[SegB] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::TestStringInterning::test_issue3437 PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[group] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[segments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[residues] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[molecules] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc[fragments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[group] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[segments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[residues] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[molecules] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_wrap[fragments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[group] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[segments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[residues] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[molecules] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyattrs.py::Testcenter_of_charge::test_coc_unwrap[fragments] PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_eq PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ne PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_gt PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_lt PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_len PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_hash PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_indices PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_partner_VE PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondlength PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_bondrepr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_angle_180 PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_dihedral_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_improper_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_repr_VE PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_partner PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_ureybradley_distance PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyObjects::test_cmap_repr_VE PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_len PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_iter PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_keyerror PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_td_universe PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_types PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bonds_contains PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_uniqueness PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_reversal PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_no_reversal PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_types PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_contains PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_uniqueness PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angles_reversal PASSED [ 29%] 972s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_types PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_contains PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_uniqueness PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedrals_reversal PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_creation_TG PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_tg_creation_bad_btype PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bond_tg_creation_notype PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_angle_tg_creation_notype PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_dihedral_tg_creation_notype PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_guessed_tg_2 PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_equality PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_create_TopologyGroup PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[bonds] PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[angles] PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[dihedrals] PASSED [ 29%] 973s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_loose_intersection[impropers] PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_strict_intersection PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TopologyGroups PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_empty_to_TG PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TO_to_empty_TG PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_TG_to_empty_TG PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_singleitem PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_add_wrongtype_TopologyGroup PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_bad_add_TopologyGroup PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_single PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_slice PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_fancy PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_TG_getitem_bool_IE PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom1 PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom2 PASSED [ 29%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3_IE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom3 PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4_IE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup::test_atom4 PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_bonds PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_bonds PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_angles PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_angles PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_wrong_type_dihedrals PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_dihedrals PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::TestTopologyGroup_Cython::test_right_type_impropers PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_bond_length_pbc PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_cross_universe_eq PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_bonds PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_topologyobjects.py::test_zero_size_TG_indices_angles PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_topology_stringio PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_trajectory_stringio PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_make_universe_stringio_no_format PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_no_trajectory_AE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_unrecognizedformat_VE_msg PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_topology_IE_msg PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_filename_IE_msg PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidfile_IE_msg PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_Universe_invalidpermissionfile_IE_msg PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_VE PASSED [ 30%] 974s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_success PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_load_new_memory_reader_fails PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_kwargs PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_topology_class_with_coords PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseCreation::test_universe_empty_ROMol SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_default SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_from_bad_smiles SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_no_Hs SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_gencoords_without_Hs_error SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_generate_coordinates_numConfs SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_rdkit_kwargs SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverseFromSmiles::test_coordinates SKIPPED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_bad_topology PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_returns_Universe PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_None_returns_Universe PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_new_TypeError PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_structure PASSED [ 30%] 975s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_list PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_load_multiple_args PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_pickle PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[int] PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float32] PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestUniverse::test_set_dimensions[float64] PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_callable PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestTransformations::test_list PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_automatic_type_and_mass_guessing PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_no_type_and_mass_guessing PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_context PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_invalid_attributes PASSED [ 30%] 976s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guess_masses_before_types PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessTopologyAttrs::test_guessing_read_attributes PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessMasses::test_universe_loading_no_warning PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_no_vdwradii PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_with_vdwradii PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_off PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_universe_guess_bonds_arguments PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.55-0.1-2] PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.9-1.6-1] PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.5-0.2-2] PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds[0.1-0.1-0] PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_no_vdwradii PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_atomgroup_guess_bonds_with_vdwradii PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_bonds_periodicity PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestGuessBonds::test_guess_read_bonds PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries PASSED [ 30%] 977s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_w_timeseries_frame_interval PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_reader_wo_timeseries_frame_interval PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_existing_universe PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_frame_interval_convention PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_with_start_stop PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_start PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_without_stop PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_without_start_stop PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_with_start_stop PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_step_dt PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_start PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_slicing_negative_stop PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_transfer_to_memory_kwargs PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestInMemoryUniverse::test_in_memory_kwargs PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_reader_singleframe_2 PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_parser PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestCustomReaders::test_custom_both PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_TA_fail PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_nodefault_fail PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[name-names-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[names-names-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[type-types-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[types-types-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[element-elements-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[elements-elements-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radius-radii-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[radii-radii-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainID-chainIDs-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[chainIDs-chainIDs-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactor-tempfactors-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[tempfactors-tempfactors-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[mass-masses-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[masses-masses-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charge-charges-0.0_1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[charges-charges-0.0_1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactor-bfactors-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[bfactors-bfactors-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancy-occupancies-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[occupancies-occupancies-0.0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLoc-altLocs-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[altLocs-altLocs-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resid-resids-1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resids-resids-1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resname-resnames-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnames-resnames-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnum-resnums-1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[resnums-resnums-1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icode-icodes-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[icodes-icodes-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segid-segids-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_charges[segids-segids-] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[bonds-values2] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[angles-values3] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[dihedrals-values4] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection[impropers-values5] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-rubbish] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[bonds-values3] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-values4] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[angles-rubbish] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[dihedrals-values6] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_connection_error[impropers-values7] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyAttr::test_add_attr_length_error PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_TA_fail PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_absent_fail PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_wrongtype_fail PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charge-charges] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[charges-charges] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_str[bonds-bonds] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_transplants PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_error PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_attr_from_ag PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestDelTopologyAttr::test_del_func_from_universe PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[bonds-values0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[angles-values1] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[dihedrals-values2] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_empty[impropers-values3] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_reversed_duplicates PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[bonds-values0] PASSED [ 30%] 978s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[angles-values1] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[dihedrals-values2] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_indices_to_populated[impropers-values3] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[bonds-values0] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[angles-values1] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[dihedrals-values2] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_empty[impropers-values3] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[bonds-values0] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[angles-values1] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[dihedrals-values2] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_to_populated[impropers-values3] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[angles-values1] PASSED [ 30%] 979s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[bonds-values0] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[angles-values1] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[dihedrals-values2] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_to_populated[impropers-values3] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[bonds-values0] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[angles-values1] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[dihedrals-values2] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologyobjects_wrong_universe_error[impropers-values3] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[bonds-values0] PASSED [ 30%] 980s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[angles-values1] PASSED [ 30%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[dihedrals-values2] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroups_to_populated[impropers-values3] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[angles-values1] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[bonds-values0] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[angles-values1] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[dihedrals-values2] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_topologygroup_different_universe[impropers-values3] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[impropers-values0] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[dihedrals-values1] PASSED [ 31%] 981s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[angles-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_topologygroup_error[bonds-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_nonexistent_indices_error[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[bonds-2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[angles-3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_wrong_number_of_atoms_error[impropers-4] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_add_bonds_refresh_fragments PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestAddTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_indices[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_indices[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_atomgroup[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_atomgroup_wrong_universe_error[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_atomgroup[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_mixed_type[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologyobjects[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologyobjects_wrong_universe[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_valid_topologygroup[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_wrong_universe_error[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_topologygroup_different_universe[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[bonds-2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[angles-3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[dihedrals-4] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_wrong_number_of_atoms_error[impropers-4] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_missing_attr[impropers-values3] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_bonds_refresh_fragments PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/1hvr.pdb-72] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_delete_all_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/conect_parsing.pdb-8] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[bonds-values0] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[angles-values1] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[dihedrals-values2] PASSED [ 31%] 982s testsuite/MDAnalysisTests/core/test_universe.py::TestDeleteTopologyObjects::test_roundtrip[impropers-values3] PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_length PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_all_coordinates_frame PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestAllCoordinatesKwarg::test_second_frame PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_extra PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_resindex_warning PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_segindex_warning PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_no_trivial_warning PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_multiple_frames PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_trajectory_iteration PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_velocities PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_forces PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_no_atoms PASSED [ 31%] 983s testsuite/MDAnalysisTests/core/test_universe.py::TestEmpty::test_empty_creation_raises_error PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_universe.py::test_deprecate_b_tempfactors PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_universe.py::TestOnlyTopology::test_only_top PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-group-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-com-segments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-group-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-cog-segments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-group-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[False-None-segments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-group-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-com-segments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-group-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-cog-segments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-fragments-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-molecules-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-residues] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-residues-segments] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-atoms] PASSED [ 31%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_pass[True-None-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-com-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-cog-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[False-None-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-com-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-cog-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_wrap_unwrap_cycle[True-None-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-com-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-cog-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[False-None-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-com-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-cog-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-fragments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-molecules] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-group] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_partial_frags[True-None-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-com-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-cog-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-residues-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-group-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[False-None-segments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-fragments-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-atoms] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-residues] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-molecules-segments] PASSED [ 32%] 984s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-atoms] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-residues] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-residues-segments] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-atoms] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-residues] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-group-segments] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-atoms] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-residues] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-com-segments-segments] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-atoms] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-residues] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-fragments-segments] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-atoms] PASSED [ 32%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-cog-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_empty_group[True-None-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-com-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-cog-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[False-None-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-com-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-cog-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_duplicates[True-None-segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-fragments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-molecules] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-group] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[False-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-fragments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-molecules] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-group] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_com_cog_difference[True-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_zero_mass_exception_safety[segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_reference_exception_safety[segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[com-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[cog-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_wrong_compound_exception_safety[None-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[residues-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[group-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_masses_exception_safety[segments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-fragments-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-molecules-segments] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-atoms] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-residues] PASSED [ 33%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-residues-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-group-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[com-segments-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-fragments-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-molecules-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-residues-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-group-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[cog-segments-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-fragments-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-molecules-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-residues-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-group-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_bonds_exception_safety[None-segments-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[com-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[cog-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-atoms] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-residues] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::TestUnwrap::test_unwrap_no_molnums_exception_safety[None-segments] PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_unwrap.py::test_uncontiguous PASSED [ 34%] 985s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_update PASSED [ 34%] 986s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_compounded_update PASSED [ 34%] 986s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update PASSED [ 34%] 986s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_chained_update2 PASSED [ 34%] 986s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_slice_is_static PASSED [ 34%] 986s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_kwarg_check PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_atoms PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelection::test_copy PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUpdatingSelectionNotraj::test_update PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_creating PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestUAGCallCount::test_updated_when_next PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_nested_uags PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::TestDynamicUAG::test_driveby PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_representations PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_updating_atomgroup.py::test_empty_UAG PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-com-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[False-cog-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-com-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_pass[True-cog-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-com-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-molecules-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[False-cog-fragments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-atoms-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-group-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-segments-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-residues-segments] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-atoms] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-residues] PASSED [ 34%] 987s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-molecules-segments] PASSED [ 34%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-atoms] PASSED [ 34%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-residues] PASSED [ 34%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-com-fragments-segments] PASSED [ 34%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_wrap_cycle[True-cog-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-com-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[False-cog-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-com-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_partial_compound[True-cog-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-com-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[False-cog-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-com-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_empty_group[True-cog-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-residues-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-molecules-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-com-fragments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-atoms-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-group-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-atoms] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-residues] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-segments-segments] PASSED [ 35%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[False-cog-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-com-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_duplicates[True-cog-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-group] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-molecules] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[False-fragments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-group] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-molecules] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_com_cog_difference[True-fragments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_zero_mass_exception_safety[fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_center_exception_safety[fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[com-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_wrong_compound_exception_safety[cog-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_unwrap_no_masses_exception_safety[fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[com-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_bonds_exception_safety[cog-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[com-fragments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-atoms-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-group-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-segments-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-residues-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-molecules-segments] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-atoms] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-residues] PASSED [ 36%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrap::test_wrap_no_molnums_exception_safety[cog-fragments-segments] PASSED [ 37%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box0] PASSED [ 37%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_box_fail[box1] PASSED [ 37%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_small_box PASSED [ 37%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_large_box PASSED [ 37%] 988s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_atoms PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[com] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_group[cog] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[com] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_residues[cog] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[com] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_segments[cog] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[com] PASSED [ 37%] 989s testsuite/MDAnalysisTests/core/test_wrap.py::TestWrapTRZ::test_wrap_fragments[cog] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-False] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-True] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_is_periodic[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-True] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coordsshape[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-unit_cell0] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-unit_cell1] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_unit_cell[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-unit_cell2] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_over_max PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_last PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_closed PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_after_read PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_pickle_immediately PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[10] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[42] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_normal[21] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_seek_negative PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_open_wrong_mode PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_raise_not_existing PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_zero_based_frames_counting PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-5545] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_natoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-375] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_closed PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-98] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-1] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_length_traj[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-10] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_write_mode_file PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-* DIMS ADK SEQUENCE FOR PORE PROGRAM * WRITTEN BY LIZ DENNING (6.2008) * DATE: 6/ 6/ 8 17:23:56 CREATED BY USER: denniej0 ] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-Created by DCD pluginREMARKS Created 06 July, 2014 at 17:29Y5~CORD,] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_header_remarks[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-* CHARMM TRICLINIC BOX TESTING * (OLIVER BECKSTEIN 2014) * BASED ON NPTDYN.INP : SCOTT FELLER, NIH, 7/15/95 * TEST EXTENDED SYSTEM CONSTANT PRESSURE AND TEMPERATURE * DYNAMICS WITH WATER BOX. * DATE: 7/ 7/14 13:59:46 CREATED BY USER: oliver ] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frames0] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frames1] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_read_coord_values[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frames2] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_adk_coords.npy-frame_idx0] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy-frame_idx1] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/legacy_DCD_c36_coords.npy-frame_idx2] PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_no_header PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_twice PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_header_wrong_mode PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_mode PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_remarks_property PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_header PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_num_frames PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_dcd_coordinate_data_shape PASSED [ 37%] 989s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_seek PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_coord_match PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_written_unit_cell PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int32] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int64] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float32] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float64] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[int] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_all_dtypes[float] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[array] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_array_like[list] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_xyz PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_wrong_shape_box PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_relative_frame_sizes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_file_size_breakdown[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tip125_tric_C36.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_nframessize_int[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/SiN_tric_namd.dcd] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice0-98] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice1-98] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice2-98] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice3-98] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice4-98] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice5-2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice6-10] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice7-8] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice8-1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice9-0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice10-1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice11-1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice12-2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice13-1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice14-1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice15-2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice16-4] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice17-3] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_slices[slice18-2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fac-shape0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[fca-shape1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[afc-shape2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[acf-shape3] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[caf-shape4] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_order[cfa-shape5] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_readframes_atomindices[indices2] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libdcd.py::test_write_random_unitcell PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_natoms[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_over_seek[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_after_iteration[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_zero_based_frame_tell[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_closed[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_double_iter[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_seek_negative[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_len[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_raise_not_existing[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_open_wrong_mode[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_read_write_mode_file[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_last_frame[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_closed[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-XTCFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestCommonAPI::test_pickle_immediately[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-TRRFile] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_offset[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_set_offsets[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_fail_wrong_offsets[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_overflow[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_all_bytes[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc-offsets0] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::TestOffsets::test_seek_tell_largefile[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr-offsets1] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[XTCFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_steps[TRRFile-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_box_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_xyz_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_velocities_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_forces_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_lmbda_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_prec_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int32] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int64] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float32] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float64] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[int] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_dtype[float] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[array] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_xtc_array_like[list] PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_prec PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_different_box_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_xtc PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_prec PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_step_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_time_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_box_trr PASSED [ 37%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_xyx_trr PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_velocities_trr PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_written_forces_trr PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int32] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int64] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float32] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float64] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[int] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_dtype[float] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[array] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_trr_array_like[list] PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_box_trr PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_natoms PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_x_trr PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_v PASSED [ 38%] 990s testsuite/MDAnalysisTests/formats/test_libmdaxdr.py::test_write_different_f PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_get_guesser_with_universe PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_invalid_attribute PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_attribute_with_missing_parent_attr PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guessing PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guessing PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_priority PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_partial_guess_attr_with_unknown_no_value_label PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_read PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_existing_in_universe PASSED [ 38%] 990s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_force PASSED [ 38%] 995s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_init PASSED [ 38%] 999s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_topology_objects_out_of_order_guess PASSED [ 38%] 999s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_force_guess_overwrites_existing_bonds PASSED [ 38%] 1014s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_angles_respects_bond_kwargs PASSED [ 38%] 1015s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guessing_dihedrals_respects_bond_kwargs PASSED [ 38%] 1015s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_unsupported_attribute PASSED [ 38%] 1016s testsuite/MDAnalysisTests/guesser/test_base.py::TestBaseGuesser::test_guess_singular PASSED [ 38%] 1017s testsuite/MDAnalysisTests/guesser/test_base.py::test_Universe_guess_bonds_deprecated PASSED [ 38%] 1017s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd] PASSED [ 38%] 1017s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc] PASSED [ 38%] 1017s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[universe_input2] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_coordinates[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.pdb] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_base.py::test_universe_creation_from_specific_array PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_universe PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_from_guesser_object PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_warn PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_atom_mass PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessMasses::test_guess_masses_with_no_reference_elements PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_types PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_partial_guess_elements PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_elements_from_no_data PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_charge PASSED [ 38%] 1018s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_Error PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_vdw_error PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bond_coord_error PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_angles_with_no_bonds PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_dihedrals_with_no_angles PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_angles PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_impropers_with_no_angles PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0-0] PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[0.55-4] PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_water_fudge_factor_passed[200-6] PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_adk PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_bonds_peptide PASSED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CCO] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 38%] 1019s testsuite/MDAnalysisTests/guesser/test_default_guesser.py::test_aromaticity SKIPPED [ 38%] 1022s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_called PASSED [ 38%] 1022s testsuite/MDAnalysisTests/import/test_import.py::TestMDAImport::test_os_dot_fork_not_none PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q0-res0-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q1-res1-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q2-res2-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q3-res3-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q4-res4-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q5-res5-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q6-res6-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q7-res7-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_augment[q8-res8-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres0-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres1-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres2-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres3-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres4-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres5-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres6-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres7-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_augment.py::test_undoaugment[qres8-b1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values3] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values4] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_unique_int_1d[values5] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges0-ref0] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges1-ref1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges2-ref2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_find_fragments[edges3-ref3] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr10-arr20] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_cutil.py::test_in2d_VE[arr11-arr21] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_pass PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_shape PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCheckResultArray::test_check_result_array_wrong_dtype PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float32] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::test_transform_StoR_pass[float64] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_noresults PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 38%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_checkbrute[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-bruteforce-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-pkdtree-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-box1-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[None-nsgrid-None-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box0-100-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_1_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-1-query_2_atomgroup] PASSED [ 39%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-box1-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-bruteforce-None-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box0-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-box1-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-pkdtree-None-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box0-100-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_1_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-1-query_2_atomgroup] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1] PASSED [ 40%] 1022s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_1_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-box1-100-query_2_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_1_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-1-query_2_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_1_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_capped_distance_return[0.1-nsgrid-None-100-query_2_atomgroup] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-None-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-False-0.1-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-None-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[False-True-0.1-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-None-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-False-0.1-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-bruteforce-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-pkdtree-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-box1-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-None-nsgrid-None-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-1] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box0-100] PASSED [ 40%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-box1-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-bruteforce-None-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box0-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-box1-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-pkdtree-None-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box0-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-box1-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_self_capped_distance[True-True-0.1-nsgrid-None-100] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.02-_bruteforce_capped_self-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[1-0.2-_bruteforce_capped_self-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.02-_pkdtree_capped_self-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selfselection[600-0.2-_nsgrid_capped_self-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.02-_bruteforce_capped-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[1-0.2-_bruteforce_capped-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.02-_nsgrid_capped-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[200-0.35-_bruteforce_capped-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-None] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box1] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestCappedDistances::test_method_selection[10000-0.35-_nsgrid_capped-box2] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC[ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_noPBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC[ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system-ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC_mixed_combinations[ref_system_universe-ref_system_universe-openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArray::test_PBC2[openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::test_distance_array_overflow_exception PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::test_self_distance_array_overflow_exception PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 41%] 1023s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 41%] 1024s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 41%] 1024s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 41%] 1024s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 41%] 1025s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 41%] 1026s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[all-np_slice0-openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice1-openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice2-openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_simple[openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_outarray[openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_periodic[openmp] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[serial] PASSED [ 41%] 1027s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_simple[openmp] PASSED [ 41%] 1028s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-serial] PASSED [ 41%] 1028s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-None-openmp] PASSED [ 41%] 1028s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-serial] PASSED [ 41%] 1028s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[all-np_slice0-box1-openmp] PASSED [ 41%] 1028s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-None-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 0 to 8 -np_slice1-box1-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-None-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy[index 9-np_slice2-box1-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 0 to 8 -np_slice0-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestSelfDistanceArrayDCD_TRIC::test_atomgroup_matches_numpy_tric[index 9-np_slice1-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_transforms[S_mol_single-openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_selfdist[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_distarray[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_dist[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestTriclinicDistances::test_pbc_wrong_wassenaar_distance[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[None] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::test_issue_3725[box2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::test_HAS_DISTOPIA_incompatible_distopia PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[serial-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds[openmp-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badbox[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_badresult[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[serial-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_triclinic[openmp-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-True-shift3] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[serial-False-shift3] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-True-shift3] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_bonds_single_coords[openmp-False-shift3] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[serial-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float32] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles[openmp-positions_atomgroups-float64] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[serial] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_bad_result[openmp] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift0-case2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case0] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case1] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift1-case2] PASSED [ 41%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-True-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[serial-False-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-True-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_angles_single_coords[openmp-False-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float32] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions-float64] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float32] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[serial-positions_atomgroups-float64] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float32] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions-float64] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float32] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals[openmp-positions_atomgroups-float64] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_wronglength[openmp] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_bad_result[openmp] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift0-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift1-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift2-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-True-shift3-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift0-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift1-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift2-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[serial-False-shift3-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift0-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift1-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift2-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-True-shift3-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift0-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift1-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift2-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case0] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case1] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case2] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case3] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case4] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_dihedrals_single_coords[openmp-False-shift3-case5] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_bonds[openmp] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_angles[openmp] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::TestCythonFunctions::test_numpy_compliance_dihedrals[openmp] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-serial] PASSED [ 42%] 1029s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_pos-openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_ortho_PBC[DCD_universe_ag-openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_pos_box-openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_tric_PBC[Triclinic_universe_ag_box-openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_strictly_in_central_image_ortho[openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::Test_apply_PBC::test_coords_in_central_image_tric[openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_angles[openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[serial] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestPeriodicAngles::test_dihedrals[openmp] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-box1] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[serial-None] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-box1] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array[openmp-None] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-box1] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[serial-None] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-box1] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_distance_array_atomgroup[openmp-None] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-box1] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[serial-None] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box0] PASSED [ 42%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_distance_array_atomgroup[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[bruteforce-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[pkdtree-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[nsgrid-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_capped_distance[None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[bruteforce-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[pkdtree-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[nsgrid-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_self_capped_distance[None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_transform_RtoS_and_StoR[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_bonds_atomgroup[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_angles_atomgroup[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_calc_dihedrals_atomgroup[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestInputUnchanged::test_input_unchanged_apply_PBC_atomgroup[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_distance_array[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[serial-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_distance_array[openmp-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[bruteforce-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[pkdtree-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[nsgrid-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_capped_distance[None-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[bruteforce-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[pkdtree-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[nsgrid-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-False-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-0.0-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box0] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-box1] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_self_capped_distance[None-True-None-None] PASSED [ 43%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_RtoS[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_transform_StoR[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[serial-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_bonds[openmp-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[serial-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_angles[openmp-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[serial-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_calc_dihedrals[openmp-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[serial-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestEmptyInputCoordinates::test_empty_input_apply_PBC[openmp-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords1-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords2-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords3-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords4-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords5-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords6-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords7-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords8-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[serial-incoords9-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords1-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords2-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords3-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords4-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords5-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords6-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords7-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords8-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_distance_array[openmp-incoords9-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords1-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords2-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[serial-incoords3-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords1-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords2-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_distance_array[openmp-incoords3-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords4-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-False-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-0.0-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords5-True-None-None] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box0] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-box1] PASSED [ 44%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords6-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords7-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords8-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[bruteforce-incoords9-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords4-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords5-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords6-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords7-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords8-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[pkdtree-incoords9-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 45%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords4-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords5-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords6-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords7-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords8-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[nsgrid-incoords9-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords0-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords1-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords2-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords3-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords4-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords5-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords6-True-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-0.0-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-box1] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-False-None-None] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box0] PASSED [ 46%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords7-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords8-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_capped_distance[None-incoords9-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords0-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords1-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords2-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[bruteforce-incoords3-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords0-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords1-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords2-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[pkdtree-incoords3-True-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-0.0-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-box1] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-False-None-None] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box0] PASSED [ 47%] 1030s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords0-True-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-False-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords1-True-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-False-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords2-True-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-False-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[nsgrid-incoords3-True-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-False-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords0-True-None-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box0] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-box1] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-0.0-None] PASSED [ 47%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-False-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-0.0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords1-True-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-0.0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-False-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-0.0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords2-True-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-0.0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-False-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-0.0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_self_capped_distance[None-incoords3-True-None-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[serial-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_dtype_transform_RtoS[openmp-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords1-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords2-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords3-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords4-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords5-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[serial-incoords6-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords1-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords2-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords3-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords4-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords5-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_bonds[openmp-incoords6-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords1-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords2-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords3-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords4-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords5-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords6-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords7-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords8-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords9-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[serial-incoords10-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords1-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords2-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords3-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords4-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords5-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords6-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords7-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords8-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords9-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_angles[openmp-incoords10-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords0-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords1-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords2-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords3-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords4-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords5-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords6-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords7-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords8-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords9-None] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-box0] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-box1] PASSED [ 48%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords10-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords11-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords12-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords13-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords14-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords15-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords15-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[serial-incoords15-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords0-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords0-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords0-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords1-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords1-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords1-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords2-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords2-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords2-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords3-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords3-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords3-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords4-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords5-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords6-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords6-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords6-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords7-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords7-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords7-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords8-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords8-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords8-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords9-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords9-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords9-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords10-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords10-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords10-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords11-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords11-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords11-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords12-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords12-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords12-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords13-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords13-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords13-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords14-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords14-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords14-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords15-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords15-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_calc_dihedrals[openmp-incoords15-None] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords0-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords0-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords1-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords1-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords2-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords2-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords3-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[serial-incoords3-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords0-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords0-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords1-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords1-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords2-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords2-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords3-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestOutputTypes::test_output_type_apply_PBC[openmp-incoords3-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[serial] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[Serial] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[SeRiAL] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[SERIAL] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[openmp] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[OpenMP] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[oPENmP] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_case_insensitivity[OPENMP] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::TestDistanceBackendSelection::test_wront_backend PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_used_openmpflag PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift0-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift0-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift1-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift1-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift2-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift2-box1] PASSED [ 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PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift7-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift8-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift8-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift9-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift9-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift10-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift10-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift11-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift11-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift12-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift12-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift13-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift13-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift14-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift14-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift15-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift15-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift16-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift16-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift17-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift17-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift18-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift18-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift19-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift19-box1] PASSED [ 49%] 1031s 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PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift24-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift25-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift25-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift26-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift26-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift27-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift27-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift28-box0] PASSED [ 49%] 1031s 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PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift33-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift33-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift34-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift34-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift35-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift35-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift36-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift36-box1] PASSED [ 49%] 1031s 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PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift41-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift42-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift42-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift43-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift43-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift44-box0] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift44-box1] PASSED [ 49%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float32-shift45-box0] PASSED [ 49%] 1031s 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testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift102-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift102-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift103-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift103-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift104-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift104-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift105-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift105-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift106-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift106-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift107-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift107-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift108-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift108-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift109-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift109-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift110-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift110-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift111-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift111-box1] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift112-box0] PASSED [ 51%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift112-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift113-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift113-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift114-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift114-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift115-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift115-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift116-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift116-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift117-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift117-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift118-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift118-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift119-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift119-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift120-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift120-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift121-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift121-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift122-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift122-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift123-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift123-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_distances.py::test_minimize_vectors[float64-shift124-box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_output PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_disable PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_log.py::TestProgressBar::test_verbose_disable PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_search PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_neighborsearch.py::test_zero PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box0] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box1] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box2] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box3] PASSED [ 52%] 1031s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_pbc_box[box4] PASSED [ 52%] 1032s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[-4-Cutoff must be positive] PASSED [ 52%] 1032s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_badcutoff[100000-Cutoff 100000 too large for box] PASSED [ 52%] 1032s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_ns_grid_noneighbor PASSED [ 52%] 1032s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC_rect PASSED [ 52%] 1033s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_PBC PASSED [ 52%] 1033s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pairs PASSED [ 52%] 1033s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_pair_distances PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_distances PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[None-results0] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box1-results1] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_search[box2-results2] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[None-21] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box1-21] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box2-26] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_selfsearch[box3-33] PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_nsgrid_probe_close_to_box_boundary PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_zero_max_dist PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_res PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_around_overlapping PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part1 PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2229_part2 PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2919 PASSED [ 52%] 1034s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2345 PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_2670 PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_nsgrid.py::test_issue_3183 SKIPPED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[None-1.0-Donot provide cutoff distance for non PBC aware calculations] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_setcoords[b1-None-Provide a cutoff distance with tree.set_coords(...)] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchfail PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b0-q0-result0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b1-q1-result1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_search[b2-q2-result2] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_nopbc PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b0-2.0-result0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b1-2.0-result1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b2-4.5-Set cutoff greater or equal to the radius.] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchpairs[b3-0.1-result3] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.1-result0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_ckd_searchpairs_nopbc[0.3-result1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b0-q0-result0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b1-q1-result1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b2-q2-result2] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_pkdtree.py::test_searchtree[b3-q3-result3] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float64] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_dummy[float32] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float64] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_qcprot.py::TestQCProt::test_regression[float32] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::test_absence_cutil PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::test_presence_cutil PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS300:HZ1-residue0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300:HZ1-residue1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[K300-residue2] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[LYS 300:HZ1-residue3] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue[M1:CA-residue4] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_parse_residue_ValueError PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISA-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HISB-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSE-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HSD-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS1-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIS2-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HIE-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[HID-H] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYS-K] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYSH-K] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[LYN-K] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ALA-A] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASP-D] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASPH-D] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASH-D] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLU-E] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLUH-E] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLH-E] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[ASN-N] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[GLN-Q] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS-C] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYSH-C] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS1-C] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_3to1[CYS2-C] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[H-strings0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[K-strings1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[A-strings2] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[D-strings3] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[E-strings4] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[N-strings5] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[Q-strings6] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_convert_aa_1to3[C-strings7] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[XYZXYZ] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestStringFunctions::test_ValueError[\xa3] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::test_greedy_splitext PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-None-False-foo.psf] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-False-foo.pdb] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo.psf-pdb-True-foo.psf] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-False-foo.pdb] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_string[foo-pdb-True-foo.pdb] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestFilename::test_named_stream PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis0-y_axis0-1.5707963267948966] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis1-y_axis1-1.0471975511965976] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis2-y_axis2-1.5707963267948966] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis3-y_axis3-1.5707963267948966] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis4-y_axis4-1.0471975511965976] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis5-y_axis5-nan] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_vectors[x_axis6-y_axis6-0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis0-y_axis0-3.141592653589793] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_pi[x_axis1-y_axis1-0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.16534698176788384] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.3306939635357677] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.4960409453036515] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.6613879270715354] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.8267349088394192] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[0.992081890607303] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.1574288723751869] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.3227758541430708] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.4881228359109546] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.6534698176788385] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.8188167994467224] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[1.984163781214606] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.14951076298249] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.3148577447503738] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.4802047265182576] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.6455517082861415] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.8108986900540254] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[2.9762456718219092] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_range[3.141592653589793] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector0-1] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector1-1.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm[vector2-0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.16534698176788384] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.3306939635357677] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.4960409453036515] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.6613879270715354] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.8267349088394192] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[0.992081890607303] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.1574288723751869] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.3227758541430708] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.4881228359109546] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.6534698176788385] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.8188167994467224] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[1.984163781214606] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.14951076298249] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.3148577447503738] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.4802047265182576] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.6455517082861415] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.8108986900540254] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[2.9762456718219092] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_norm_range[3.141592653589793] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec10-vec20-value0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_normal[vec11-vec21-0.0] PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_angle_lower_clip PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_stp PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_dihedral PASSED [ 52%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pdot PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestGeometryFunctions::test_pnorm PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles0-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles1-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles2-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles3-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles4-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles5-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles6-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles7-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths6] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths7] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths8] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths9] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths10] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths11] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths12] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths13] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths14] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths15] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths16] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths17] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths18] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles8-lengths19] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths0] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths1] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths2] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths3] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths4] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths5] PASSED [ 53%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles9-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles10-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles11-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles12-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles13-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles14-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles15-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles16-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths15] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths16] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths17] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths18] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles17-lengths19] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths0] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths1] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths2] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths3] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths4] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths5] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths6] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths7] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths8] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths9] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths10] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths11] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths12] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths13] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths14] PASSED [ 54%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles18-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles19-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles20-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles21-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles22-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles23-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles24-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles25-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles26-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths3] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths4] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths5] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths6] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths7] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths8] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths9] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths10] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths11] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths12] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths13] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths14] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths15] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths16] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths17] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths18] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles27-lengths19] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths0] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths1] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths2] PASSED [ 55%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths3] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths4] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths5] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths6] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths7] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths8] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths9] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths10] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths11] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths12] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths13] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths14] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths15] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths16] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths17] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths18] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles28-lengths19] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths0] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths1] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths2] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths3] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths4] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths5] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths6] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths7] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths8] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths9] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths10] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths11] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths12] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths13] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths14] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths15] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths16] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths17] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths18] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles29-lengths19] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths0] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths1] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths2] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths3] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths4] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths5] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths6] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths7] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths8] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths9] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths10] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths11] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths12] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths13] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths14] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths15] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths16] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths17] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths18] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles30-lengths19] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths0] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths1] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths2] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths3] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths4] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths5] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths6] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths7] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths8] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths9] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths10] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths11] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths12] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths13] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths14] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths15] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths16] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths17] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths18] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles31-lengths19] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths0] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths1] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths2] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths3] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths4] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths5] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths6] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths7] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths8] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths9] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths10] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths11] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths12] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths13] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths14] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths15] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths16] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths17] PASSED [ 56%] 1035s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths18] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles32-lengths19] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths0] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths1] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths2] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths3] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths4] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths5] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths6] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths7] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths8] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths9] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths10] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths11] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths12] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths13] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths14] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths15] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths16] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths17] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths18] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles33-lengths19] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths0] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths1] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths2] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths3] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths4] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths5] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths6] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths7] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths8] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths9] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths10] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths11] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths12] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths13] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths14] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths15] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths16] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths17] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths18] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles34-lengths19] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths0] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths1] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths2] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths3] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths4] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths5] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths6] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths7] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths8] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths9] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths10] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths11] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths12] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths13] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths14] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths15] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths16] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths17] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths18] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles35-lengths19] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths0] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths1] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths2] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths3] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths4] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths5] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths6] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths7] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths8] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths9] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths10] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths11] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths12] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths13] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths14] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths15] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths16] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths17] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths18] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles36-lengths19] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths0] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths1] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths2] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths3] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths4] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths5] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths6] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths7] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths8] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths9] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths10] PASSED [ 56%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles37-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles38-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles39-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles40-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles41-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles42-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles43-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles44-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles45-lengths19] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths0] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths1] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths2] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths3] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths4] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths5] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths6] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths7] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths8] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths9] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths10] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths11] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths12] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths13] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths14] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths15] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths16] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths17] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths18] PASSED [ 57%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles46-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles47-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles48-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles49-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles50-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles51-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles52-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles53-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles54-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths8] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths9] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths10] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths11] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths12] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths13] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths14] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths15] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths16] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths17] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths18] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles55-lengths19] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths0] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths1] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths2] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths3] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths4] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths5] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths6] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths7] PASSED [ 58%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles56-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles57-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles58-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles59-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles60-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles61-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles62-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles63-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths16] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths17] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths18] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles64-lengths19] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths0] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths1] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths2] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths3] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths4] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths5] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths6] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths7] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths8] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths9] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths10] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths11] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths12] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths13] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths14] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths15] PASSED [ 59%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles65-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles66-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles67-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles68-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles69-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles70-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles71-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles72-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles73-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths4] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths5] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths6] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths7] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths8] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths9] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths10] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths11] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths12] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths13] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths14] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths15] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths16] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths17] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths18] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles74-lengths19] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths0] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths1] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths2] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths3] PASSED [ 60%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles75-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles76-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles77-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles78-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles79-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles80-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles81-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles82-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths0] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths1] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths2] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths3] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths4] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths5] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths6] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths7] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths8] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths9] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths10] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths11] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths12] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths13] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths14] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths15] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths16] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths17] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths18] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors[angles83-lengths19] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-60] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-60-90] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-60] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[60-90-90] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-60] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-60-90] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-60] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_right_angle_zeros[90-90-90] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[int] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float32] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_retval[float64] PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle PASSED [ 61%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_vectors_box_cycle_exact[angles6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles0-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles1-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles2-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles3-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles4-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles5-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles6-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles7-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths1] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths2] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths3] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths4] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths5] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths6] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths7] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths8] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths9] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths10] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths11] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths12] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths13] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths14] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths15] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths16] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths17] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths18] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles8-lengths19] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths0] PASSED [ 62%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles9-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles10-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles11-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles12-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles13-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles14-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles15-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles16-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths9] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths10] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths11] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths12] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths13] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths14] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths15] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths16] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths17] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths18] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles17-lengths19] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths0] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths1] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths2] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths3] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths4] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths5] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths6] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths7] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths8] PASSED [ 63%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths9] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths10] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths11] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths12] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths13] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths14] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths15] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths16] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths17] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths18] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles18-lengths19] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths0] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths1] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths2] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths3] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths4] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths5] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths6] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths7] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths8] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths9] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths10] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths11] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths12] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths13] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths14] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths15] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths16] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths17] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths18] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles19-lengths19] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths0] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths1] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths2] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths3] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths4] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths5] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths6] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths7] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths8] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths9] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths10] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths11] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths12] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths13] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths14] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths15] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths16] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths17] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths18] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles20-lengths19] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths0] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths1] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths2] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths3] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths4] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths5] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths6] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths7] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths8] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths9] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths10] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths11] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths12] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths13] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths14] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths15] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths16] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths17] PASSED [ 64%] 1036s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles21-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles22-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles23-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles24-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles25-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths18] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles26-lengths19] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths0] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths1] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths2] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths3] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths4] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths5] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths6] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths7] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths8] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths9] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths10] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths11] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths12] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths13] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths14] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths15] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths16] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths17] PASSED [ 64%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles27-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles28-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles29-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles30-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles31-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles32-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles33-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles34-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles35-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths6] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths7] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths8] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths9] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths10] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths11] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths12] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths13] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths14] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths15] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths16] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths17] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths18] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles36-lengths19] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths0] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths1] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths2] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths3] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths4] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths5] PASSED [ 65%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles37-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles38-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles39-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles40-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles41-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles42-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles43-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles44-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths14] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths15] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths16] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths17] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths18] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles45-lengths19] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths0] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths1] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths2] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths3] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths4] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths5] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths6] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths7] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths8] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths9] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths10] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths11] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths12] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths13] PASSED [ 66%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles46-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles47-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles48-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles49-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles50-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles51-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles52-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles53-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles54-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths3] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths4] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths5] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths6] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths7] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths8] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths9] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths10] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths11] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths12] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths13] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths14] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths15] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths16] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths17] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths18] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles55-lengths19] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths0] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths1] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths2] PASSED [ 67%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles56-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles57-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles58-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles59-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles60-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles61-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles62-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles63-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths11] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths12] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths13] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths14] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths15] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths16] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths17] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths18] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles64-lengths19] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths0] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths1] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths2] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths3] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths4] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths5] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths6] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths7] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths8] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths9] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths10] PASSED [ 68%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles65-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles66-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles67-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles68-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles69-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles70-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles71-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles72-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles73-lengths19] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths0] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths1] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths2] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths3] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths4] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths5] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths6] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths7] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths8] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths9] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths10] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths11] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths12] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths13] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths14] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths15] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths16] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths17] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths18] PASSED [ 69%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles74-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles75-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles76-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles77-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles78-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles79-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles80-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles81-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles82-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths8] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths9] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths10] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths11] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths12] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths13] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths14] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths15] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths16] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths17] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths18] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_triclinic_box[angles83-lengths19] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths0] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths1] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths2] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths3] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths4] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths5] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths6] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths7] PASSED [ 70%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles0-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles1-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles2-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles3-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles4-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles5-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles6-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles7-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths16] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths17] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths18] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles8-lengths19] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths0] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths1] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths2] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths3] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths4] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths5] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths6] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths7] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths8] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths9] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths10] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths11] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths12] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths13] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths14] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths15] PASSED [ 71%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths16] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths17] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths18] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles9-lengths19] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths0] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths1] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths2] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths3] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths4] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths5] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths6] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths7] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths8] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths9] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths10] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths11] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths12] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths13] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths14] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths15] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths16] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths17] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths18] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles10-lengths19] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths0] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths1] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths2] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths3] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths4] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths5] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths6] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths7] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths8] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths9] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths10] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths11] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths12] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths13] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths14] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths15] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths16] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths17] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths18] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles11-lengths19] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths0] PASSED [ 72%] 1037s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles12-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles13-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles14-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles15-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles16-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles17-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths4] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths5] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths6] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths7] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths8] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths9] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths10] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths11] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths12] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths13] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths14] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths15] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths16] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths17] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths18] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles18-lengths19] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths0] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths1] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths2] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths3] PASSED [ 72%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles19-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles20-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles21-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles22-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles23-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles24-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles25-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles26-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths12] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths13] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths14] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths15] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths16] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths17] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths18] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles27-lengths19] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths0] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths1] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths2] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths3] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths4] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths5] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths6] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths7] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths8] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths9] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths10] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths11] PASSED [ 73%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles28-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles29-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles30-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles31-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles32-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles33-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles34-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles35-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles36-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths1] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths2] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths3] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths4] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths5] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths6] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths7] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths8] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths9] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths10] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths11] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths12] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths13] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths14] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths15] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths16] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths17] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths18] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles37-lengths19] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths0] PASSED [ 74%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles38-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles39-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles40-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles41-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles42-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles43-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles44-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles45-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths9] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths10] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths11] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths12] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths13] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths14] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths15] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths16] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths17] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths18] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles46-lengths19] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths0] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths1] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths2] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths3] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths4] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths5] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths6] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths7] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths8] PASSED [ 75%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles47-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles48-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles49-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles50-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles51-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles52-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles53-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles54-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths17] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths18] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles55-lengths19] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths0] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths1] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths2] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths3] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths4] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths5] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths6] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths7] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths8] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths9] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths10] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths11] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths12] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths13] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths14] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths15] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths16] PASSED [ 76%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles56-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles57-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles58-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles59-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles60-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles61-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles62-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles63-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles64-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths6] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths7] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths8] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths9] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths10] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths11] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths12] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths13] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths14] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths15] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths16] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths17] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths18] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles65-lengths19] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths0] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths1] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths2] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths3] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths4] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths5] PASSED [ 77%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles66-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles67-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles68-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles69-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles70-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles71-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles72-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles73-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths14] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths15] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths16] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths17] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths18] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles74-lengths19] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths0] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths1] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths2] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths3] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths4] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths5] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths6] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths7] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths8] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths9] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths10] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths11] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths12] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths13] PASSED [ 78%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles75-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles76-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles77-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles78-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles79-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles80-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles81-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles82-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths4] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths5] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths6] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths7] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths8] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths9] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths10] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths11] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths12] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths13] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths14] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths15] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths16] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths17] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths18] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_box_volume[angles83-lengths19] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape0] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape1] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape2] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMatrixOperations::test_sarrus_det_wrong_shape[shape3] PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_return_value PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_single_atom_no_bonds PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_empty_ag PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_scrambled_ag PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_out_of_place PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_precision_box PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_no_bonds PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_zero_box_size PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_wrong_reference_atom PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_impossible_solve PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_1 PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_2 PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_3 PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_solve_4 PASSED [ 79%] 1038s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_double_frag_short_bonds PASSED [ 79%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_triclinic PASSED [ 79%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_fullerene PASSED [ 79%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestMakeWhole::test_make_whole_multiple_molecules PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_lookup PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val1_inject PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_lookup PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val2_inject PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_set PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val3_del PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val4_args PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val5_kwargs PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCachedDecorator::test_val6_universe_validation PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[0.45-0.45] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[.45-0.45] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_float[a.b-a.b] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input0-output0] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestConvFloat::test_map[input1-output1] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_keys PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_ValueError PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.1-4.0-5.0-10-0.1-4.0-5.0] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestFixedwidthBins::test_usage[0.4-4.0-5.0-3-0.4-3.9-5.1] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[None-None] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[mass-result1] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights2-result2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights3-result3] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_ok[weights4-result4] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[42] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[geometry] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights3] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights4] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights5] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_check_weights_raises_ValueError[weights6] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CHAIN] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CONFIG] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[CRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DATA] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DCD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[DMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[GRO] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[HISTORY] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[INPCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[LAMMPS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MDCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MMTF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[MOL2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[NCDF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PDBQT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PRMTOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PQR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[PSF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[RESTRT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TPR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRJ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XML] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XPDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XTC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[XYZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[TRZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[chain] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[config] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[crd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[data] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dcd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[dms] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gms] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[gro] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[history] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[inpcrd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[lammps] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mdcrd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mmtf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[mol2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[nc] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[ncdf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdb] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pdbqt] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[prmtop] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[pqr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[psf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[restrt] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[top] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[tpr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trj] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xml] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xpdb] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xtc] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[xyz] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_extention[trz] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CHAIN] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CONFIG] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[CRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DATA] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DCD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[DMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[GRO] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[HISTORY] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[INPCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[LAMMPS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MDCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MMTF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[MOL2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[NCDF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PDBQT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PRMTOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PQR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[PSF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[RESTRT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TPR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRJ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XML] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XPDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XTC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[XYZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[TRZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[chain] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[config] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[crd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[data] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dcd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[dms] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gms] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[gro] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[history] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[inpcrd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[lammps] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mdcrd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mmtf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[mol2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[nc] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[ncdf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdb] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pdbqt] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[prmtop] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[pqr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[psf] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[restrt] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[top] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[tpr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trj] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trr] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xml] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xpdb] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xtc] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[xyz] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed_without_compression_extention[trz] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CHAIN] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CONFIG] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-CRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DATA] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DCD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-DMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GMS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-GRO] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-HISTORY] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-INPCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-LAMMPS] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MDCRD] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MMTF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-MOL2] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-NCDF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PDBQT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PRMTOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PQR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-PSF] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-RESTRT] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TOP] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TPR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRJ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRR] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XML] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XPDB] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XTC] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-XYZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-TRZ] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-chain] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-config] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-crd] PASSED [ 80%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-data] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dcd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-dms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-gro] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-history] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-inpcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-lammps] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mdcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mmtf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-mol2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-nc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-ncdf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pdbqt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-prmtop] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-pqr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-psf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-restrt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-top] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-tpr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trj] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xml] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xpdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xtc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-xyz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.bz2-trz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CHAIN] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CONFIG] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-CRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DATA] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DCD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-DMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-GRO] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-HISTORY] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-INPCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-LAMMPS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MDCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MMTF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-MOL2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-NCDF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PDBQT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PRMTOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PQR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-PSF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-RESTRT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TPR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRJ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XML] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XPDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XTC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-XYZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-TRZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-chain] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-config] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-crd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-data] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dcd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-dms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-gro] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-history] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-inpcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-lammps] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mdcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mmtf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-mol2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-nc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-ncdf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pdbqt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-prmtop] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-pqr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-psf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-restrt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-top] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-tpr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trj] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xml] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xpdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xtc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-xyz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_compressed[.gz-trz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CHAIN] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CONFIG] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[CRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DATA] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DCD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[DMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[GRO] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[HISTORY] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[INPCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[LAMMPS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MDCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MMTF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[MOL2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[NCDF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PDBQT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PRMTOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PQR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[PSF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[RESTRT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TPR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRJ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XML] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XPDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XTC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[XYZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[TRZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[chain] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[config] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[crd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[data] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dcd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[dms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gms] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[gro] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[history] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[inpcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[lammps] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mdcrd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mmtf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[mol2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[nc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[ncdf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pdbqt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[prmtop] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[pqr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[psf] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[restrt] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[top] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[tpr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trj] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trr] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xml] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xpdb] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xtc] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[xyz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format[trz] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CHAIN] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CONFIG] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-CRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DATA] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DCD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-DMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GMS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-GRO] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-HISTORY] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-INPCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-LAMMPS] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MDCRD] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MMTF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-MOL2] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-NCDF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PDBQT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PRMTOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PQR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-PSF] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-RESTRT] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TOP] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TPR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRJ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRR] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XML] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XPDB] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XTC] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-XYZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-TRZ] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-chain] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-config] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-crd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-data] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dcd] PASSED [ 81%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-dms] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gms] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-gro] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-history] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-inpcrd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-lammps] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mdcrd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mmtf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-mol2] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-nc] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-ncdf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdb] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pdbqt] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-prmtop] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-pqr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-psf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-restrt] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-top] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-tpr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trj] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xml] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xpdb] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xtc] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-xyz] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.bz2-trz] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CHAIN] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CONFIG] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-CRD] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DATA] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DCD] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-DMS] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GMS] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-GRO] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-HISTORY] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-INPCRD] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-LAMMPS] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MDCRD] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MMTF] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-MOL2] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NC] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-NCDF] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDB] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PDBQT] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PRMTOP] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PQR] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-PSF] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-RESTRT] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TOP] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TPR] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRJ] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRR] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XML] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XPDB] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XTC] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-XYZ] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-TRZ] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-chain] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-config] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-crd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-data] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dcd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-dms] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gms] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-gro] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-history] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-inpcrd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-lammps] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mdcrd] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mmtf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-mol2] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-nc] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-ncdf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdb] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pdbqt] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-prmtop] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-pqr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-psf] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-restrt] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-top] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-tpr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trj] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trr] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xml] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xpdb] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xtc] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-xyz] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_compressed[.gz-trz] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CHAIN-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CONFIG-ConfigParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[CRD-CRDParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DATA-DATAParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DCD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[DMS-DMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GMS-GMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[GRO-GROParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[HISTORY-HistoryParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[INPCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[LAMMPS-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MDCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MMTF-MMTFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[MOL2-MOL2Parser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[NCDF-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDB-PDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PDBQT-PDBQTParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PRMTOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PQR-PQRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[PSF-PSFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[RESTRT-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TPR-TPRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRJ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRR-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XML-HoomdXMLParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XPDB-ExtendedPDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XTC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[XYZ-XYZParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser[TRZ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CHAIN-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CONFIG-ConfigParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-CRD-CRDParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DATA-DATAParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DCD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-DMS-DMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GMS-GMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-GRO-GROParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-HISTORY-HistoryParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-INPCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-LAMMPS-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MDCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MMTF-MMTFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-MOL2-MOL2Parser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-NCDF-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDB-PDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PDBQT-PDBQTParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PRMTOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PQR-PQRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-PSF-PSFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-RESTRT-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TPR-TPRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRJ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRR-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XML-HoomdXMLParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XPDB-ExtendedPDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XTC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-XYZ-XYZParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.bz2-TRZ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CHAIN-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CONFIG-ConfigParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-CRD-CRDParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DATA-DATAParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DCD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-DMS-DMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GMS-GMSParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-GRO-GROParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-HISTORY-HistoryParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-INPCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-LAMMPS-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MDCRD-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MMTF-MMTFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-MOL2-MOL2Parser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-NCDF-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDB-PDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PDBQT-PDBQTParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PRMTOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PQR-PQRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-PSF-PSFParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-RESTRT-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TOP-TOPParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TPR-TPRParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRJ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRR-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XML-HoomdXMLParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XPDB-ExtendedPDBParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XTC-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-XYZ-XYZParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_compressed[.gz-TRZ-MinimalParser] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_parser_invalid[extention0] SKIPPED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CHAIN-ChainReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CONFIG-ConfigReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[CRD-CRDReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DATA-DATAReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DCD-DCDReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[DMS-DMSReader] PASSED [ 82%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GMS-GMSReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[GRO-GROReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[HISTORY-HistoryReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[INPCRD-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[LAMMPS-DCDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MDCRD-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MMTF-MMTFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[MOL2-MOL2Reader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NC-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[NCDF-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDB-PDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PDBQT-PDBQTReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[PQR-PQRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[RESTRT-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRJ-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRR-TRRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XPDB-ExtendedPDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XTC-XTCReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[XYZ-XYZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader[TRZ-TRZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CHAIN-ChainReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CONFIG-ConfigReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-CRD-CRDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DATA-DATAReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DCD-DCDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-DMS-DMSReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GMS-GMSReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-GRO-GROReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-HISTORY-HistoryReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-INPCRD-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-LAMMPS-DCDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MDCRD-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MMTF-MMTFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-MOL2-MOL2Reader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NC-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-NCDF-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDB-PDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PDBQT-PDBQTReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-PQR-PQRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-RESTRT-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRJ-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRR-TRRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XPDB-ExtendedPDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XTC-XTCReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-XYZ-XYZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.bz2-TRZ-TRZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CHAIN-ChainReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CONFIG-ConfigReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-CRD-CRDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DATA-DATAReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DCD-DCDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-DMS-DMSReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GMS-GMSReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-GRO-GROReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-HISTORY-HistoryReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-INPCRD-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-LAMMPS-DCDReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MDCRD-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MMTF-MMTFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-MOL2-MOL2Reader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NC-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-NCDF-NCDFReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDB-PDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PDBQT-PDBQTReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-PQR-PQRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-RESTRT-INPReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRJ-TRJReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRR-TRRReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XPDB-ExtendedPDBReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XTC-XTCReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-XYZ-XYZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_compressed[.gz-TRZ-TRZReader] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention0] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention1] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention2] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention3] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_get_reader_invalid[extention4] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_check_compressed_format_TypeError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_format_from_filename_TypeError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_guess_format_stream_ValueError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGuessFormat::test_from_ndarray PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_2 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_3 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestUniqueRows::test_unique_rows_with_view PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_no_filename_argument PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_precedence PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_missing_extension PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_extension_empty_string PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_file_no_extension PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_wrong_format PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_compressed_extension_fail PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_non_string_filename PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_failure PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_nonsense PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[CRD-CRDWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DATA-DATAWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[DCD-DCDWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[GRO-GROWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[LAMMPS-DCDWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[MOL2-MOL2Writer] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NCDF-NCDFWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[NULL-NullWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PDBQT-PDBQTWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[PQR-PQRWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRR-TRRWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XTC-XTCWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[XYZ-XYZWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe[TRZ-TRZWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_singleframe_fails[format0] SKIPPED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[DCD-DCDWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[LAMMPS-DCDWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[MOL2-MOL2Writer] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NCDF-NCDFWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[NULL-NullWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRR-TRRWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XTC-XTCWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[XYZ-XYZWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe[TRZ-TRZWriter] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[CRD] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[DATA] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[GRO] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PDBQT] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_multiframe_fails[PQR] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestGetWriterFor::test_get_writer_for_pdb PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_1 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_2 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_3 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_4 PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestBlocksOf::test_blocks_of_ValueError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr0-answer0] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr1-answer1] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::test_group_same_or_consecutive_integers[arr2-answer2] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getitem_KeyError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setitem PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delitem_AttributeError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_setattr PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_getattr_AttributeError PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_delattr PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_eq PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestNamespace::test_len PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a0-4] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a1-34] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a2-234] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a3-1234] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestTruncateInteger::test_ltruncate_int[a4-1234] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestFlattenDict::test_flatten_dict PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestStaticVariables::test_static_variables PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_outer PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warned_state_restored_on_failure PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_once_inner PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_multiple_references PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_unnamed PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_warn_if_not_unique_fails_for_non_groupmethods PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestWarnIfNotUnique::test_filter_duplicate_with_userwarning PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_default_options PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-True] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-True-False] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-True] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-True-False-False] PASSED [ 83%] 1040s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-True-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-True-False-False-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-True-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-True-False-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-True-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-True-False-False-False-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-True-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-True] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-True-False-False] PASSED [ 83%] 1041s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-True] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-True-False] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-True] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-True-False-False-False] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-True] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-True-False] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-True] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-True-False-False] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-True] PASSED [ 83%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-True-False] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-True] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[True-False-False-False-False-False] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-True] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-True-False] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-True] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-True-False-False] PASSED [ 84%] 1042s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-True-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-True-False-False-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-True-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-True-False-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-True-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-True-False-False-False-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-True-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-True] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-True-False-False] PASSED [ 84%] 1043s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-True-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-True-False-False-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-True-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-True-False-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-True-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup[False-False-False-False-False-False] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_not_allowed_default PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_enforce_copy PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_allow_single PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_convert_single PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_reduce_result_if_single PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_no_check_lengths_match PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_atomgroup_mismatched_lengths PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_invalid_input PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_usage_with_kwargs PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_func_call PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckCoords::test_wrong_decorator_usage PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[None-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-None-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-99.0.0-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-None-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-None] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate[use the new stuff-2099-Multiverse-MDAnalysis.Universe] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_deprecate_missing_release_ValueError PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_set_function_name PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[one line text] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ one line with leading space] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[multiline\n\n with some\n leading space] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_dedent_docstring[ multiline\n\n with all\n leading space] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box0] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box1] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box2] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box3] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box4] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box5] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box6] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_ortho[box7] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_None PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box0] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box1] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box2] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box3] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box4] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box5] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box6] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_tri_vecs[box7] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_data PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestCheckBox::test_check_box_wrong_shape PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_default PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::TestStoreInitArguments::test_store_arguments_withkwargs PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_which PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[math-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[sys-True] PASSED [ 84%] 1044s testsuite/MDAnalysisTests/lib/test_util.py::test_is_installed[some_weird_module_name-False] PASSED [ 84%] 1045s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u0] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u1] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u2] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u3] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u4] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u5] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u6] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u7] SKIPPED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u8] PASSED [ 84%] 1046s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u9] PASSED [ 84%] 1048s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u10] PASSED [ 84%] 1053s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u11] PASSED [ 84%] 1053s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u12] PASSED [ 84%] 1053s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u13] PASSED [ 84%] 1053s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_multiprocess_COG[u14] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_universe_unpickle_in_new_process PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_creating_multiple_universe_without_offset PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader0] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader1] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader2] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader3] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader4] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader5] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader6] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader7] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader8] PASSED [ 84%] 1054s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader9] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader10] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader11] SKIPPED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader12] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader13] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader14] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader15] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader16] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader17] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader18] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader19] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader20] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader21] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader22] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader23] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader24] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader26] PASSED [ 84%] 1055s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader27] PASSED [ 84%] 1056s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader28] PASSED [ 84%] 1058s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader29] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_readers_pickle[ref_reader30] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py::test_analysis_pickle PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_translation_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_fit_rot_trans_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_PositionAverager_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_rotateby_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_translate_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_center_in_box_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_wrap_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py::test_add_unwrap_pickle[u0] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_Universe PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_Writer PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_AtomGroup PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_ResidueGroup PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_SegmentGroup PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.dssp] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.legacy] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.data] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hbonds] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.clustering] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.encore.dimensionality_reduction] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.analysis.hydrogenbonds] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.transformations] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.converters] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.include] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.libmdanalysis] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.include] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.formats.src] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.lib.src.transformations] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.guesser] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.coordinates] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.visualization] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.auxiliary] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.core] PASSED [ 84%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.tests] PASSED [ 85%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology] PASSED [ 85%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.topology.tpr] PASSED [ 85%] 1059s testsuite/MDAnalysisTests/test_api.py::test_all_import[.selections] PASSED [ 85%] 1061s testsuite/MDAnalysisTests/topology/test_altloc.py::test_atomgroups PASSED [ 85%] 1062s testsuite/MDAnalysisTests/topology/test_altloc.py::test_bonds PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_altloc.py::test_write_read PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_output PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_mandatory_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_expected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_no_unexpected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_tt_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_creates_universe PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_masses PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_crd.py::TestCRDParser::test_guessed_types PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_output PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_mandatory_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_expected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_no_unexpected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_tt_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_creates_universe PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guesssed_masses PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_guessed_types PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryParser::test_names PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_output PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_mandatory_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_expected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_no_unexpected_attributes PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_tt_size PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_creates_universe PASSED [ 85%] 1063s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guesssed_masses PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_guessed_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigParser::test_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigMinimal::test_dlp_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPConfigOrder::test_dlp_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryMinimal::test_dlp_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryOrder::test_dlp_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::TestDLPHistoryClassic::test_dlp_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dlpoly.py::test_HISTORY_EOFError PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_number_of_bonds PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_atomsels PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParser::test_guessed_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_number_of_bonds PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_guessed_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_dms.py::TestDMSParserNoSegid::test_atomsels PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_guessed_masses PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_fhiaims.py::TestFHIAIMS::test_elements PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_masses PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMOPT::test_guessed_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSSYMOPT::test_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_output PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_mandatory_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_expected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_no_unexpected_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_tt_size PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_creates_universe PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_attributes PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_names PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_types PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_masses PASSED [ 85%] 1064s testsuite/MDAnalysisTests/topology/test_gms.py::TestGMSASYMSURF::test_guessed_types PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_output PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_mandatory_attributes PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_expected_attributes PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_no_unexpected_attributes PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_size PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_tt_size PASSED [ 85%] 1065s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_creates_universe PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_attributes PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_attr_size PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_masses PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROParser::test_guessed_types PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGROWideBox::test_atoms PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_empty_atom_IOerror PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::test_parse_missing_atomname_IOerror PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/residwrap.gro-resids0] PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::TestGroResidWrapping::test_wrapping_resids[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/residwrap_0base.gro-resids1] PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gro.py::test_sameresid_diffresname PASSED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_output SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_mandatory_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_expected_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_no_unexpected_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_size SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_tt_size SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_creates_universe SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_guessed_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_attr_size SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_atoms SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_bonds SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_angles SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_dihedrals SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParser::test_impropers SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_output SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_mandatory_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_expected_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_no_unexpected_attributes SKIPPED [ 85%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_size SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_tt_size SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_creates_universe SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_guessed_attributes SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_attr_size SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_atoms SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_impropers SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_bonds_identity SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_angles_identity SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_gsd.py::TestGSDParserBonds::test_dihedrals_identity SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_warn PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_masses_miss PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[H-1.008] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_get_atom_mass[XYZ-0.0] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessMasses::test_guess_atom_mass PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_types PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_empty PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_singledigit PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_atom_element_1H PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[AO5*-O] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[F--F] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HB1-H] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OC2-O] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[1he2-H] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[3hg2-H] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[OH--O] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[HO-H] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[he-H] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[zn-ZN] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Ca2+-CA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[CA-C] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[N0A-N] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0U-C] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[C0S-C] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Na+-NA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestGuessTypes::test_guess_element_from_name[Cu2+-CU] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_charge PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_Error PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_impropers PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_water PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_adk PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_bonds_peptide PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[C1=CC=CC=C1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CCO] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_aromaticities[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[C1=CC=CC=C1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CCO] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[c1ccccc1Cc1ccccc1] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::test_guess_gasteiger_charges[CN1C=NC2=C1C(=O)N(C(=O)N2C)C] SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_masses-arg0] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[validate_atom_types-arg1] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_types-arg2] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_type-CA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_element-CA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[get_atom_mass-C] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_mass-CA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_mass_type_elements_deprecations[guess_atom_charge-CA] PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_bonds_deprecations PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_angles_dihedral_deprecations PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_guessers.py::TestDeprecationWarning::test_rdkit_guessers_deprecations SKIPPED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_output PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_mandatory_attributes PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_expected_attributes PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_no_unexpected_attributes PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_size PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_tt_size PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_creates_universe PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_guessed_attributes PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_attr_size PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals PASSED [ 86%] 1066s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_impropers PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_bonds_identity PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_angles_identity PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_dihedrals_identity PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_masses PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_hoomdxml.py::TestHoomdXMLParser::test_read_charges PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_bonds_type PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_angles_type PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_multiple_types PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_dihedrals_type PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITP::test_impropers_type PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoMass::test_mass_guess PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_charge_parse PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPAtomtypes::test_mass_parse_or_guess PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_charge_parse PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPCharges::test_masses_are_read PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_angles_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_impropers_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_no_extra_angles PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_bonds_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_atom_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestDifferentDirectivesITP::test_dihedrals_identity PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_angles_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_dihedrals_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_impropers_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_whether_settles_types PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_bonds_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_defines PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPNoKeywords::test_guessed_masses PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_output PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_mandatory_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_expected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_no_unexpected_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_tt_size PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_creates_universe PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_attributes PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_dihedrals_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_impropers_total_counts PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_bonds_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_guessed_masses PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_whether_settles_types PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_angles_values PASSED [ 86%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_defines PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestITPKeywords::test_kwargs_overrides_defines PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_output PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_mandatory_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_expected_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_no_unexpected_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_size PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_tt_size PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_creates_universe PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_guessed_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_bonds_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_angles_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_dihedrals_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_impropers_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestNestedIfs::test_heavy_atom PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_mandatory_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_expected_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_no_unexpected_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_size PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_tt_size PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_bonds_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_angles_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_dihedrals_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_impropers_total_counts PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_output PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_creates_universe PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_guessed_attributes PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestReadTop::test_sequential PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_no_include PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestErrors::test_missing_endif PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relstring PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relpath PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::TestRelativePath::test_relative_path PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::test_missing_elements_no_attribute PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_deprecation_warning PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_itp.py::test_elements_nodeprecation_warning PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_output PASSED [ 87%] 1067s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_mandatory_attributes PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_expected_attributes PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_no_unexpected_attributes PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_size PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_tt_size PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_atom_types PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_bonds PASSED [ 87%] 1068s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_bond_member PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_angles PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_angle_member PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_dihedrals PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_dihedral_member PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_n_impropers PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_improper_member PASSED [ 87%] 1069s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_creates_universe PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsData::test_guessed_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_atom_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_bond_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_angles[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_angle_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_dihedrals[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_dihedral_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_n_impropers[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_improper_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSCNT::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_atom_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_bond_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_angles[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_angle_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_dihedrals[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_dihedral_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_n_impropers[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_improper_member[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSHYD::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/hydrogen-class1.data2] PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_output PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_mandatory_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_expected_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_no_unexpected_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_size PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_tt_size PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_atom_types PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_bonds PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_bond_member PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_angles PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_angle_member PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_dihedrals PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_dihedral_member PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_n_impropers PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_improper_member PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_creates_universe PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_guessed_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_atom_ids PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLAMMPSDeletedAtoms::test_traj PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_output PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_mandatory_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_expected_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_no_unexpected_attributes PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_size PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_tt_size PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_atom_types PASSED [ 87%] 1070s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_bonds PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_bond_member PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_angles PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_angle_member PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_dihedrals PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_dihedral_member PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_n_impropers PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_improper_member PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_creates_universe PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestLammpsDataPairIJ::test_guessed_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_noresid_failure PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::test_interpret_atom_style_missing PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_output PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_mandatory_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_expected_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_no_unexpected_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_size PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_tt_size PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_creates_universe PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_masses_warning PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_id_ordering PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_masses PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParser::test_guessed_types PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_output PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_mandatory_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_expected_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_no_unexpected_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_size PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_tt_size PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_creates_universe PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_masses_warning PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_attributes PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_id_ordering PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_masses PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_lammpsdata.py::TestDumpParserLong::test_guessed_types PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 87%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser[filename6-10] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_dims.dcd-3341] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/test.inpcrd-5] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd-12421] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/bala.ncdf-2661] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.trr-47681] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-47681] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_universe_with_minimal[filename6-10] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_parser_fail[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.mdcrd-252] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/bala.trj-2661] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_minimal_n_atoms_kwarg[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/trzfile.trz-8184] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array0-fac] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array1-fca] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array2-afc] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array3-acf] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array4-cfa] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_minimal_parser[array5-caf] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array0-fac] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array1-fca] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array2-afc] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array3-acf] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array4-cfa] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_minimal.py::test_memory_universe[array5-caf] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_output PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_mandatory_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_expected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_no_unexpected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_tt_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_creates_universe PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser::test_guessed_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_output PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_mandatory_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_expected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_no_unexpected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_tt_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_creates_universe PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFParser_gz::test_guessed_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_output PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_mandatory_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_expected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_no_unexpected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_tt_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_creates_universe PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny::test_guessed_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_output PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_mandatory_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_expected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_no_unexpected_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_tt_size PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_creates_universe PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFSkinny2::test_guessed_attributes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bonds PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_ids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_names PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resnames PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_segids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_resids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_occupancies PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_bfactors PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_types PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_icodes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_altlocs PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverse::test_guessed_masses PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bonds PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_ids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_names PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resnames PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_segids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_resids PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_occupancies PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_bfactors PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_types PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_icodes PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_altlocs PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_universe_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverse::test_guessed_masses PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_universe_models PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestMMTFgzUniverseFromDecoder::test_guessed_masses PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_selection PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_2 PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_3 PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_4 PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mmtf.py::TestSelectModels::test_model_multiple_5 PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_attr_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::TestMOL2Base::test_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecules.mol2] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_bond_orders PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_elements_selection PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wrong_elements_warnings PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_wrong_elements_warnings PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_all_elements PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_wo_optional_columns PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_partial_optional_columns PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_wo_required_columns PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_mol2_no_charges PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_unformat PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_mol2.py::test_guessed_masses PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[A0000-100000] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[MEGAN-20929695] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[J0NNY-15247214] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[DREW6-6417862] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ST3V3-31691119] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ADA8M-719798] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[a0000-43770016] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[megan-64599711] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[j0nny-58917230] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[drew6-50087878] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[st3v3-75361135] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ada8m-44389814] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 6-6] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 24-24] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 645-645] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[ 4951-4951] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::test_hy36decode[10267-10267] PASSED [ 88%] 1071s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_output PASSED [ 88%] 1072s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_mandatory_attributes PASSED [ 88%] 1072s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_expected_attributes PASSED [ 88%] 1072s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_no_unexpected_attributes PASSED [ 88%] 1072s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_size PASSED [ 88%] 1072s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_tt_size PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_creates_universe PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParser::test_guessed_attributes PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_output PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_mandatory_attributes PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_expected_attributes PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_no_unexpected_attributes PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_size PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_tt_size PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_creates_universe PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBParserSegids::test_guessed_attributes PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_parser_runtime PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::TestPDBConect::test_conect_topo_parser PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_conect2ter PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_single_conect PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_new_chainid_new_res PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_sameresid_diffresname PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_record_types PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_no_resid PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_hex PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_metals PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_elements PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_missing_elements_noattribute PASSED [ 88%] 1073s testsuite/MDAnalysisTests/topology/test_pdb.py::test_wrong_elements_warnings PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdb.py::test_guessed_masses_and_types_values PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdb.py::test_nobonds_error PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_charges PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge assignment - no sign for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG2\nEND\n-2] PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdb.py::test_PDB_bad_charges[REMARK Invalid charge format for MG2+\nHETATM 1 CU CU A 1 03.000 00.000 00.000 1.00 00.00 CU2+\nHETATM 2 FE FE A 2 00.000 03.000 00.000 1.00 00.00 Fe2+\nHETATM 3 Mg Mg A 3 03.000 03.000 03.000 1.00 00.00 MG+2\nEND\n-\\+2] PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_output PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_mandatory_attributes PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_expected_attributes PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_no_unexpected_attributes PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_size PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_tt_size PASSED [ 88%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_creates_universe PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::TestPDBQT::test_guessed_masses PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pdbqt.py::test_footnote PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_output PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_mandatory_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_expected_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_no_unexpected_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_tt_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_creates_universe PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_attr_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_masses PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser::test_guessed_types PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_output PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_mandatory_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_expected_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_no_unexpected_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_tt_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_creates_universe PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_attributes PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_attr_size PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_masses PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::TestPQRParser2::test_guessed_types PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::test_record_types PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_pqr.py::test_gromacs_flavour PASSED [ 89%] 1074s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[uncompressed] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_output[bz2] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[uncompressed] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_mandatory_attributes[bz2] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[uncompressed] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_expected_attributes[bz2] PASSED [ 89%] 1075s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[uncompressed] PASSED [ 89%] 1076s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_no_unexpected_attributes[bz2] PASSED [ 89%] 1076s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[uncompressed] PASSED [ 89%] 1076s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_size[bz2] PASSED [ 89%] 1076s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[uncompressed] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_tt_size[bz2] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[uncompressed] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_creates_universe[bz2] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[uncompressed] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_guessed_attributes[bz2] PASSED [ 89%] 1077s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[uncompressed] PASSED [ 89%] 1078s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_total_counts[bz2] PASSED [ 89%] 1078s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[uncompressed] PASSED [ 89%] 1078s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_atom_counts[bz2] PASSED [ 89%] 1078s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[uncompressed] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_bonds_identity[bz2] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[uncompressed] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_total_counts[bz2] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[uncompressed] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_atom_counts[bz2] PASSED [ 89%] 1079s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[uncompressed] PASSED [ 89%] 1080s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_angles_identity[bz2] PASSED [ 89%] 1080s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[uncompressed] PASSED [ 89%] 1080s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_total_counts[bz2] PASSED [ 89%] 1080s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[uncompressed] PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_atom_counts[bz2] PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[uncompressed] PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser::test_dihedrals_identity[bz2] PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_output PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_mandatory_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_expected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_no_unexpected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_tt_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_creates_universe PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestNAMDPSFParser::test_guessed_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_output PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_mandatory_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_expected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_no_unexpected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_tt_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_creates_universe PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_guessed_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParser2::test_as_universe_resids PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_output PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_mandatory_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_expected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_no_unexpected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_tt_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_creates_universe PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_guessed_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_bonds_total_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_angles_total_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_dihedrals_total_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::TestPSFParserNoTop::test_impropers_total_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_nosegid PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_psf.py::test_psf_inscode PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_tables.py::test_moved_to_guessers_warning PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_output PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_mandatory_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_expected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_no_unexpected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_tt_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_creates_universe PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_guessed_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_attr_size PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_atom_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_atom_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_atom_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_atom_counts PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_bonds_identity PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angles_identity PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedrals_identity PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_impropers_identity PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_angle_atoms_bonded PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_dihedral_atoms_bonded PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_improper_atoms_bonded PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMParser::test_elements PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_output PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_mandatory_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_expected_attributes PASSED [ 89%] 1081s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_no_unexpected_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_size PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_tt_size PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_creates_universe PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_guessed_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_attr_size PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_atom_counts PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_atom_counts PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_atom_counts PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_atom_counts PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_bonds_identity PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angles_identity PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedrals_identity PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_impropers_identity PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_angle_atoms_bonded PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_dihedral_atoms_bonded PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_improper_atoms_bonded PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_elements PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMChainidParser::test_chainIDs PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_output PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_mandatory_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_expected_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_no_unexpected_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_size PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_tt_size PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_creates_universe PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_guessed_attributes PASSED [ 89%] 1082s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_attr_size PASSED [ 89%] 1083s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_atom_counts PASSED [ 89%] 1083s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_atom_counts PASSED [ 89%] 1083s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_atom_counts PASSED [ 89%] 1083s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_atom_counts PASSED [ 89%] 1083s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_bonds_identity PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angles_identity PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedrals_identity PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_impropers_identity PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_angle_atoms_bonded PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_dihedral_atoms_bonded PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_improper_atoms_bonded PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM12Parser::test_elements PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_output PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_mandatory_attributes PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_expected_attributes PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_no_unexpected_attributes PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_size PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_tt_size PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_creates_universe PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_guessed_attributes PASSED [ 89%] 1084s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_attr_size PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_atom_counts PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_atom_counts PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_atom_counts PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_atom_counts PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_bonds_identity PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angles_identity PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedrals_identity PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_impropers_identity PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_angle_atoms_bonded PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_dihedral_atoms_bonded PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_improper_atoms_bonded PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestParm7Parser::test_elements PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_output PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_mandatory_attributes PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_expected_attributes PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_no_unexpected_attributes PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_size PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_tt_size PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_creates_universe PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_guessed_attributes PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_attr_size PASSED [ 89%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_atom_counts PASSED [ 90%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_atom_counts PASSED [ 90%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_atom_counts PASSED [ 90%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_atom_counts PASSED [ 90%] 1085s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_bonds_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angles_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedrals_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_impropers_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_angle_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_dihedral_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_improper_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRM2::test_elements PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_output PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_mandatory_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_expected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_no_unexpected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_tt_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_creates_universe PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_guessed_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_attr_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_bonds_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angles_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedrals_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_impropers_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_angle_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_dihedral_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_improper_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST::test_elements PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_output PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_mandatory_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_expected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_no_unexpected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_tt_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_creates_universe PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_guessed_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_attr_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_bonds_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angles_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedrals_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_impropers_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_angle_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_dihedral_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_improper_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMNCRST_negative::test_elements PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_output PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_mandatory_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_expected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_no_unexpected_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_tt_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_creates_universe PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_guessed_attributes PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_attr_size PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_atom_counts PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_bonds_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angles_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedrals_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_impropers_identity PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_angle_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_dihedral_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_improper_atoms_bonded PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestPRMEP::test_elements PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7-%VE Missing in header] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7-'TITLE' missing in header] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.error4.parm7-Invalid header line.] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_value_errors[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/parmed_fad.prmtop-Chamber-style TOP file] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_flag_index_error PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-errmsgs0] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-errmsgs1] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/capped-ala.prmtop-errmsgs2] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7-errmsgs3] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2-errmsgs4] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_top.py::TestErrorsAndWarnings::test_warning[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache_chainid.error5.prmtop.bz2-errmsgs5] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestSquash::test_squash PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_resid_squash PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_base.py::TestChangeSquash::test_segid_squash PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-name] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-resname] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-type] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-segid] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CONFIG-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/CONFIG_minimal-moltype] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.crd-name] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.crd-resname] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.crd-type] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.crd-segid] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[CRD-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.crd-moltype] PASSED [ 90%] 1086s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-name] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-resname] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-type] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-segid] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DATA-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/datatest.data-moltype] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_closed.dms-name] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_closed.dms-resname] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_closed.dms-type] PASSED [ 90%] 1087s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_closed.dms-segid] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[DMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_closed.dms-moltype] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-name] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-resname] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-type] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-segid] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GMS-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/symopt.gms-moltype] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-name] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-resname] PASSED [ 90%] 1088s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[GRO-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.gro-moltype] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-name] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-resname] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[HISTORY-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/HISTORY_minimal-moltype] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/173D.mmtf-name] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/173D.mmtf-resname] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/173D.mmtf-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/173D.mmtf-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MMTF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/173D.mmtf-moltype] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-name] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-resname] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[MOL2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/Molecule.mol2-moltype] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-name] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-resname] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PARM7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2-moltype] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pdb-name] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pdb-resname] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pdb-type] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pdb-segid] PASSED [ 90%] 1089s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pdb-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-name] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-resname] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-type] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-segid] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PDBQT-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pqr-name] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pqr-resname] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pqr-type] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pqr-segid] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PQR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_open.pqr-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-name] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-resname] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-type] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-segid] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PRMTOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/ache.prmtop-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk.psf-name] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk.psf-resname] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk.psf-type] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk.psf-segid] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[PSF-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk.psf-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/anti.top-name] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/anti.top-resname] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/anti.top-type] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/anti.top-segid] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TOP-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/anti.top-moltype] PASSED [ 90%] 1090s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-name] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-resname] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-type] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-segid] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[TPR-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.tpr-moltype] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-name] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-resname] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-type] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-segid] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XML-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/C12x64.xml.bz2-moltype] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-name] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-resname] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-type] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-segid] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XPDB-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/5digitResid.pdb-moltype] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mini.xyz-name] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mini.xyz-resname] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mini.xyz-type] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mini.xyz-segid] PASSED [ 90%] 1091s testsuite/MDAnalysisTests/topology/test_topology_str_types.py::test_str_types[XYZ-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mini.xyz-moltype] PASSED [ 90%] 1092s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_output PASSED [ 91%] 1092s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_mandatory_attributes PASSED [ 91%] 1092s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_expected_attributes PASSED [ 91%] 1092s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_no_unexpected_attributes PASSED [ 91%] 1092s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_size PASSED [ 91%] 1093s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_tt_size PASSED [ 91%] 1093s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_creates_universe PASSED [ 91%] 1094s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_guessed_attributes PASSED [ 91%] 1094s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_moltypes PASSED [ 91%] 1094s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_molnums PASSED [ 91%] 1094s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR::test_chainIDs PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1095s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1096s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1097s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1098s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1099s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1100s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1101s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1102s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1103s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1104s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1105s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 91%] 1106s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 91%] 1107s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1108s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1108s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1108s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1109s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1110s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1111s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1112s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1113s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1114s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1115s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 92%] 1116s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 92%] 1117s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRGromacsVersions::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 92%] 1118s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_output PASSED [ 92%] 1118s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_mandatory_attributes PASSED [ 92%] 1118s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_expected_attributes PASSED [ 92%] 1118s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_no_unexpected_attributes PASSED [ 92%] 1119s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_size PASSED [ 92%] 1119s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_tt_size PASSED [ 92%] 1119s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_creates_universe PASSED [ 92%] 1119s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_guessed_attributes PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_moltypes PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_molnums PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPRDouble::test_chainIDs PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1120s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1121s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1121s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1121s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1121s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1121s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1122s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1122s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1122s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1122s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1122s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1123s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1123s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1123s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1123s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1123s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_moltypes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_molnums[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::TestTPR46x::test_chainIDs[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 92%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1124s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond8-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond9-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond10-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 93%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_bonds[bond11-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle6-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_angles[angle7-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 94%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih2-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih3-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih4-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_dihedrals[dih5-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr0-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_all_impropers[impr1-/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr] PASSED [ 95%] 1125s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr] PASSED [ 95%] 1126s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr] PASSED [ 95%] 1126s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr] PASSED [ 95%] 1126s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr] PASSED [ 95%] 1126s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr] PASSED [ 95%] 1126s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_settle[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2024.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr-OSError] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr-OSError] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr-NotImplementedError] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_fail_for_unsupported_files[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/adk_oplsaa.xtc-OSError] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/dummy_2024.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2024.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_no_elements[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr] PASSED [ 95%] 1127s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_elements PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[False-0] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_tprparser.py::test_resids[True-1] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_number_of_bonds[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.txyz] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::TestTXYZParser::test_atom_type_type[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/test.arc] PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::test_TXYZ_elements PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::test_missing_elements_noattribute PASSED [ 95%] 1128s testsuite/MDAnalysisTests/topology/test_txyz.py::test_guessed_masses PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_output PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_mandatory_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_expected_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_no_unexpected_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_size PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_tt_size PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_creates_universe PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_masses PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xpdb.py::TestXPDBParser::test_guessed_types PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_output PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_mandatory_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_expected_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_no_unexpected_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_size PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_tt_size PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_creates_universe PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZMini::test_guessed_attributes PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_output[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_mandatory_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_expected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_no_unexpected_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_tt_size[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_creates_universe[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_attributes[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_masses[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/topology/test_xyz.py::TestXYZParser::test_guessed_types[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/2r9r-1b.xyz.bz2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_base.py::test_default_value PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_base.py::test_no_transform_function PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_base.py::test_custom_value PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_base.py::test_setting_thread_limit_value PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_base.py::test_thread_limit_apply PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_boxdimensions_dims PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes0] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[dim_vector_shapes5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector[111909090] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes0] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[dim_vector_forms_dtypes1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_vector_asarray[abcd] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_dimensions_transformations_api PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_transformations_api PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_boxdimensions.py::test_varying_dimensions_no_data PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe0] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[universe5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[thisisnotanag] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_ag[1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[ ] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[totallynotmasses] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[123456789] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_weights[weights6] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[plane3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_bad_plane[notaplane] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_masses PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_no_options PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_residue_mismatch PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_com PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[yz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_plane[xy] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_all_options PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_translation_transformations_api PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe0] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe2] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[universe5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[thisisnotanag] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_universe[1] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_shorter_universe PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[ ] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[totallynotmasses] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[123456789] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights3] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_weights[weights6] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[ ] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[totallynotaplane] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[xyz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[123456789] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane4] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane5] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane6] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_bad_plane[plane7] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_no_options PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[yz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xz] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_plane[xy] PASSED [ 96%] 1128s testsuite/MDAnalysisTests/transformations/test_fit.py::test_fit_rot_trans_transformations_api PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_orthogonal_fwd PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_nonorthogonal_fwd PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_2nd_frame PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_3rd_frame PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_iterate_twice PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_skip PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_stride_2 PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_nojump_constantvel_jumparound PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions_init PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_missing_dimensions PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_nojump.py::test_notinvertible PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_fwd PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_bwd PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_reset PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_positionaveraging.py::test_posavging_specific_noreset PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotation_matrix PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_custom_point[point1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_vector[vector1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_nopbc PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_nopbc PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_cog_pbc PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_atomgroup_com_pbc PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag2] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag3] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag4] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[ag5] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[thisisnotanag] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_ag[1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point2] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point3] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point4] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[point5] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[thisisnotapoint] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_point[1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction2] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction3] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction4] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[direction5] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[thisisnotadirection] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_direction[1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_pbc PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[ ] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[totallynotmasses] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[123456789] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights3] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights4] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights5] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_bad_weights[weights6] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_masses PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_rotate.py::test_rotateby_no_args PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_coords PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector2] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector3] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector4] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_vector[vector5] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_translate_transformations_api PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_ag PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point0] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point1] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point2] PASSED [ 96%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point3] PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point4] PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_point[point5] PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_pbc PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_bad_center PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_no_masses PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_no_options PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_pbc PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_mass PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_with_box PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_in_box_coords_all_options PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_translate.py::test_center_transformations_api PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag0] PASSED [ 97%] 1129s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_bad_ag[ag1] PASSED [ 97%] 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testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[segments] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_with_compounds[fragments] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_wrap_api PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag0] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag1] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag2] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag3] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag4] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[ag5] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[thisisnotanag] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_bad_ag[1] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap PASSED [ 97%] 1136s testsuite/MDAnalysisTests/transformations/test_wrap.py::test_unwrap_api PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_authors.py::test_package_authors PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_failed_import PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_import PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_all_exports PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_datafiles.py::test_export_variables PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_active PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.25080/majora-629e541a-00e] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_primary[MDAnalysis-MDAnalysis-10.1002/jcc.21787] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel-10.1063/1.4922445] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.leaflet-MDAnalysis.analysis.leaflet-10.1002/jcc.21787] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-10.1107/s0108767305015266] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.lib.qcprot-MDAnalysis.lib.qcprot-qcprot2] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.encore-MDAnalysis.analysis.encore-10.1371/journal.pcbi.1004415] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_collector_analysis_modules[MDAnalysis.analysis.dssp-MDAnalysis.analysis.dssp-10.1002/bip.360221211] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_mmtf PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_duecredit.py::TestDuecredit::test_duecredit_h5md PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_failure.py::test_failure PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/test_api.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/util.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/datafiles.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/dummy.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_nuclinfo.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_bat.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_distances.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_leaflet.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_waterdynamics.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_pca.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_psa.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_backends.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_helix_analysis.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_data.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_gnm.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_lineardensity.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_atomicdistances.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_rdf.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_dihedrals.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_dielectric.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_results.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_rms.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_base.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_wbridge.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_msd.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_hole2.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_density.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_persistencelength.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_diffusionmap.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_nucleicacids.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_encore.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_dssp.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_align.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/conftest.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_contacts.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/analysis/test_rdf_s.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_rotate.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_positionaveraging.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_nojump.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_wrap.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_base.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_fit.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_boxdimensions.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/transformations/test_translate.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_transformations.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_pickleio.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_streamio.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_units.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_imports.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_persistence.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_meta.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_selections.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_modelling.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_duecredit.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_authors.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_failure.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_qcprot.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_log.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/utils/test_datafiles.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_rdkit_parser.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_openmm.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_rdkit.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_parmed_parser.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_base.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_parmed.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/converters/test_openmm_parser.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/analysis/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gms/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gromos11/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/contacts/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/merge/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/merge/2zmm/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gromacs/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/Amber/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/capping/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/windows/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/mol2/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/virtual_sites/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/tprs/all_bonded/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/create_data.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/coordinates/create_h5md_data.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/lammps/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/data/dlpoly/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_util.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_pkdtree.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_distances.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_augment.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_nsgrid.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_qcprot.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_cutil.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_log.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/lib/test_neighborsearch.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/guesser/test_default_guesser.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/guesser/test_base.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/import/test_import.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/import/fork_called.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/import/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_trc.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_fhiaims.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_netcdf.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_trz.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_txyz.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_xyz.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_tng.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_null.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_memory.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_chemfiles.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_pdb.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_mmtf.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_trj.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_dms.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_xdr.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_dlpoly.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_windows.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/base.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_gsd.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/__init__.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_chainreader.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_pdbqt.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_h5md.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_gro.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_pqr.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_writer_api.py] PASSED [ 97%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_dcd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_reader_api.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_mol2.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_lammps.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_gms.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_crd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_writer_registration.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_copying.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/coordinates/reference.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/visualization/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/auxiliary/test_edr.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/auxiliary/test_core.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/auxiliary/base.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/auxiliary/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/auxiliary/test_xvg.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/parallelism/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_segmentgroup.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_atomselections.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_fragments.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_universe.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_updating_atomgroup.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/util.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_topology.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_atomgroup.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_segment.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_group_traj_access.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_atom.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_topologyobjects.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_topologyattrs.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_wrap.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_unwrap.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_groups.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_residuegroup.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_residue.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_accessors.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_copying.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_accumulate.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_index_dtype.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/core/test_requires.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/formats/test_libmdaxdr.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/formats/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/formats/test_libdcd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_fhiaims.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_txyz.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_xyz.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_pdb.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_mmtf.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_lammpsdata.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_psf.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_dms.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_altloc.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_hoomdxml.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_dlpoly.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_tprparser.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/base.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_topology_str_types.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_gsd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/__init__.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_pdbqt.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_gro.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_pqr.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_guessers.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_xpdb.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_topology_base.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_mol2.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_gms.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_crd.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_itp.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_top.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_minimal.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_imports.py::test_relative_import[/tmp/autopkgtest.cKrTAu/build.zms/src/testsuite/MDAnalysisTests/topology/test_tables.py] PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_log.py::test_start_stop_logging PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_meta.py::test_import PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_meta.py::test_matching_versions PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_format PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_meta.py::test_version_at_packagelevel PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_file PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_modelling.py::TestCapping::test_capping_inmemory PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge_same_universe PASSED [ 98%] 1136s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_residue_references PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_segment_references PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_empty_ValueError PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_nonsense_TypeError PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_emptyAG_ValueError PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMerge::test_merge_without_coords PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_with_topology PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_with_topology_from_different_universes PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_modelling.py::TestMergeTopology::test_merge_without_topology PASSED [ 98%] 1137s testsuite/MDAnalysisTests/utils/test_persistence.py::TestAtomGroupPickle::test_unpickle PASSED [ 98%] 1137s 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testsuite/MDAnalysisTests/utils/test_transformations.py::TestProjectionFromMatrix::test_projection_from_matrix_4 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_1[clip_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_1[clip_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_2[clip_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_2[clip_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_left_right_bounds[clip_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_left_right_bounds[clip_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_bottom_top_bounds[clip_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_bottom_top_bounds[clip_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_near_far_bounds[clip_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestClipMatrix::test_clip_matrix_frustrum_near_far_bounds[clip_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_matrix[shear_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_matrix[shear_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_shear_from_matrix PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_1 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_2 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestDecomposeMatrix::test_decompose_matrix_3 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_compose_matrix PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_1[orthogonalization_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_1[orthogonalization_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_2[orthogonalization_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestOrthogonalizationMatrix::test_orthogonalization_matrix_2[orthogonalization_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_superimposition_matrix[superimposition_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_1[euler_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerMatrix::test_euler_matrix_2[euler_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_1[euler_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestEulerFromMatrix::test_euler_from_matrix_2[euler_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_euler_from_quaternion PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_from_euler[quaternion_from_euler1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_about_axis[quaternion_about_axis1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_1[quaternion_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_2[quaternion_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionMatrix::test_quaternion_matrix_3[quaternion_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_1[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_2[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_3[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_4[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_5[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestQuaternionFromMatrix::test_quaternion_from_matrix_6[quaternion_from_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_multiply[quaternion_multiply1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_conjugate[quaternion_conjugate1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_inverse[quaternion_inverse1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_real PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_imag PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_quaternion_slerp[quaternion_slerp1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_1[random_quaternion1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomQuaternion::test_random_quaternion_2[random_quaternion1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_random_rotation_matrix[random_rotation_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[1-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[2-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[3-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[4-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[5-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse[6-inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestInverseMatrix::test_inverse_matrix[inverse_matrix1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_1[is_same_transform1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestIsSameTransform::test_is_same_transform_2[is_same_transform1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_1[random_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestRandomVector::test_random_vector_2[random_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_1[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_2[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_3[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_4[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_5[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestUnitVector::test_unit_vector_6[unit_vector1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_1[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_2[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_3[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_4[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_5[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestVectorNorm::test_vector_norm_6[vector_norm1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_1 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::TestArcBall::test_arcball_2 PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_equal_vectors PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_transformations.py::test_rotaxis_different_vectors PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestUnitEncoding::test_unicode_encoding_with_symbol PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[N_Avogadro-6.02214129e+23] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[elementary_charge-1.602176565e-19] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[calorie-4.184] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzmann_constant-0.008314462159] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[Boltzman_constant-0.008314462159] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_constant[electric_constant-0.00552635] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConstants::test_boltzmann_typo_deprecation PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[12.34567-nm-A-123.4567] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_length[123.4567-Angstrom-nm-12.34567] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-kJ/mol-4.184] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_energy[1-kcal/mol-eV-0.0433641] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kJ/(mol*A)-J/m-1.66053892103219e-11] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[2.5-kJ/(mol*nm)-kJ/(mol*A)-0.25] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_force[1-kcal/(mol*Angstrom)-kJ/(mol*Angstrom)-4.184] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-m/s-100.0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-nm/ps-0.1] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ps-pm/ps-100.0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/ms-A/ps-1000000000.0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/us-A/ps-1000000.0] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/fs-A/ps-0.001] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_speed[1-A/AKMA-A/ps-20.45482949774598] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-Stone-nm] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unknown[12.34567-nm-Stone] PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestConversion::test_unit_unconvertable PASSED [ 99%] 1146s testsuite/MDAnalysisTests/utils/test_units.py::TestBaseUnits::test_MDANALYSIS_BASE_UNITS_correct PASSED [ 99%] 1146s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D PASSED [ 99%] 1146s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_2D_zero_return PASSED [ 99%] 1146s testsuite/MDAnalysisTests/visualization/test_streamlines.py::test_streamplot_3D PASSED [100%] 1146s 1146s = 18298 passed, 533 skipped, 836 deselected, 4 xfailed, 2 xpassed, 100515 warnings in 553.56s (0:09:13) = 1165s 1165s DueCredit Report: 1165s - Molecular simulation analysis library / MDAnalysis (v 2.8.0) [1, 2] 1165s - Bond-Angle-Torsions Coordinate Transformation / MDAnalysis.analysis.bat.BAT (v 2.8.0) [3] 1165s - Dielectric analysis / MDAnalysis.analysis.dielectric (v 2.8.0) [4] 1165s - DSSP algorithm description / MDAnalysis.analysis.dssp (v 2.8.0) [5] 1165s - ENCORE Ensemble Comparison / MDAnalysis.analysis.encore (v 2.8.0) [6] 1165s - Hydrogen bond analysis implementation / MDAnalysis.analysis.hydrogenbonds.hbond_analysis (v 2.8.0) [7] 1165s - Hydrogen bonding autocorrelation time / MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel (v 2.8.0) [8] 1165s - LeafletFinder algorithm / MDAnalysis.analysis.leaflet (v 2.8.0) [2] 1165s - FCA fast correlation algorithm, Mean Squared Displacements with tidynamics / MDAnalysis.analysis.msd (v 2.8.0) [9, 10] 1165s - Cumulative overlap / MDAnalysis.analysis.pca (v 2.8.0) [11] 1165s - Specifications of the H5MD standard, MDAnalysis trajectory reader/writer of the H5MDformat / MDAnalysis.coordinates.H5MD (v 2.8.0, 1.1) [12, 13] 1165s - MMTF Reader / MDAnalysis.coordinates.MMTF (v 2.8.0) [14] 1165s - The TNG paper / MDAnalysis.coordinates.TNG (v 2.8.0) [15] 1165s - QCProt implementation / MDAnalysis.lib.qcprot (v 2.8.0) [16, 17] 1165s - MMTF Parser / MDAnalysis.topology.MMTFParser (v 2.8.0) [14] 1165s - Works through the orthogonal case for unwrapping, and proposes the non-orthogonal approach. / MDAnalysis.transformations.nojump (v 2.8.0) [18] 1165s - Scientific tools library / numpy (v 2.2.3) [19] 1165s 1165s 2 packages cited 1165s 15 modules cited 1165s 0 functions cited 1165s 1165s References 1165s ---------- 1165s 1165s [1] Gowers, R. et al., 2016. 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Computing in Science & Engineering, 13(2), pp.22–30. 1169s autopkgtest [15:50:13]: test test-mdanalysis: -----------------------] 1170s test-mdanalysis PASS 1170s autopkgtest [15:50:14]: test test-mdanalysis: - - - - - - - - - - results - - - - - - - - - - 1170s autopkgtest [15:50:14]: @@@@@@@@@@@@@@@@@@@@ summary 1170s test-mdanalysis PASS 1189s nova [W] Using flock in prodstack6-s390x 1189s flock: timeout while waiting to get lock 1189s Creating nova instance adt-plucky-s390x-mdanalysis-20250315-153044-juju-7f2275-prod-proposed-migration-environment-15-df6bc83d-46d8-4fb8-8e98-94a8a977e095 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 1189s nova [W] Timed out waiting for 613ece98-d79f-4c34-8b18-d5d566bfbbb7 to get deleted.