0s autopkgtest [11:51:59]: starting date and time: 2024-11-13 11:51:59+0000
  0s autopkgtest [11:51:59]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [11:51:59]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.jcbabu1t/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade mdanalysis --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-13.secgroup --name adt-plucky-s390x-mdanalysis-20241113-115159-juju-7f2275-prod-proposed-migration-environment-15-8c1f2c22-846a-42b9-b0ad-02689db11426 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
111s autopkgtest [11:53:50]: testbed dpkg architecture: s390x
111s autopkgtest [11:53:50]: testbed apt version: 2.9.8
111s autopkgtest [11:53:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup
112s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
112s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB]
113s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB]
113s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
113s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB]
113s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [85.8 kB]
113s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [565 kB]
113s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [16.6 kB]
113s Fetched 1689 kB in 1s (2272 kB/s)
113s Reading package lists...
115s Reading package lists...
115s Building dependency tree...
115s Reading state information...
115s Calculating upgrade...
115s The following NEW packages will be installed:
115s   python3.13-gdbm
115s The following packages will be upgraded:
115s   libgpgme11t64 libpython3-stdlib python3 python3-gdbm python3-minimal
115s 5 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
115s Need to get 252 kB of archives.
115s After this operation, 98.3 kB of additional disk space will be used.
115s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB]
115s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB]
115s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB]
115s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB]
116s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B]
116s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB]
116s Fetched 252 kB in 0s (614 kB/s)
116s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55510 files and directories currently installed.)
116s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ...
116s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ...
116s Setting up python3-minimal (3.12.7-1) ...
116s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55510 files and directories currently installed.)
116s Preparing to unpack .../python3_3.12.7-1_s390x.deb ...
116s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ...
116s Preparing to unpack .../libpython3-stdlib_3.12.7-1_s390x.deb ...
116s Unpacking libpython3-stdlib:s390x (3.12.7-1) over (3.12.6-0ubuntu1) ...
116s Selecting previously unselected package python3.13-gdbm.
116s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ...
116s Unpacking python3.13-gdbm (3.13.0-2) ...
116s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ...
116s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ...
116s Preparing to unpack .../libgpgme11t64_1.23.2-5ubuntu4_s390x.deb ...
116s Unpacking libgpgme11t64:s390x (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ...
116s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ...
116s Setting up python3.13-gdbm (3.13.0-2) ...
116s Setting up libpython3-stdlib:s390x (3.12.7-1) ...
116s Setting up python3 (3.12.7-1) ...
117s Setting up python3-gdbm:s390x (3.12.7-1) ...
117s Processing triggers for man-db (2.12.1-3) ...
117s Processing triggers for libc-bin (2.40-1ubuntu3) ...
117s Reading package lists...
117s Building dependency tree...
117s Reading state information...
118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
118s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
118s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
118s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
119s Reading package lists...
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
119s Calculating upgrade...
119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
122s autopkgtest [11:54:01]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024
122s autopkgtest [11:54:01]: @@@@@@@@@@@@@@@@@@@@ apt-source mdanalysis
126s Get:1 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.7.0-5 (dsc) [2889 B]
126s Get:2 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.7.0-5 (tar) [47.0 MB]
126s Get:3 http://ftpmaster.internal/ubuntu plucky/universe mdanalysis 2.7.0-5 (diff) [10.9 kB]
126s gpgv: Signature made Sat Aug 10 17:37:57 2024 UTC
126s gpgv:                using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA
126s gpgv:                issuer "dparsons@debian.org"
126s gpgv: Can't check signature: No public key
126s dpkg-source: warning: cannot verify inline signature for ./mdanalysis_2.7.0-5.dsc: no acceptable signature found
128s autopkgtest [11:54:07]: testing package mdanalysis version 2.7.0-5
128s autopkgtest [11:54:07]: build not needed
133s autopkgtest [11:54:12]: test test-mdanalysis: preparing testbed
135s Reading package lists...
135s Building dependency tree...
135s Reading state information...
135s Starting pkgProblemResolver with broken count: 0
135s Starting 2 pkgProblemResolver with broken count: 0
135s Done
135s The following additional packages will be installed:
135s   autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14
135s   cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu cython3 debhelper debugedit
135s   dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz
135s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome
135s   fonts-lato fonts-lyx fonts-mathjax fonts-urw-base35 g++ g++-14
135s   g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu
135s   gcc-s390x-linux-gnu gettext intltool-debian libaec0 libarchive-zip-perl
135s   libasan8 libblas3 libcairo2 libcc1-0 libdebhelper-perl libdeflate0
135s   libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfontenc1
135s   libfreetype6 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3
135s   libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libisl23
135s   libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui
135s   libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl liblapack3
135s   liblbfgsb0 liblcms2-2 liblzf1 libmpc3 libnetcdf19t64 libopenjp2-7
135s   libpixman-1-0 libpython3-all-dev libpython3-dev libpython3.12-dev
135s   libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib
135s   libqhull-r8.0 libraqm0 libsharpyuv0 libstdc++-14-dev libsz2 libtcl8.6
135s   libtiff6 libtk8.6 libtool libubsan1 libwebp7 libwebpdemux2 libwebpmux3
135s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 m4
135s   po-debconf pybuild-plugin-pyproject python-matplotlib-data
135s   python-mdanalysis-doc python3-alabaster python3-all python3-all-dev
135s   python3-appdirs python3-biopython python3-brotli python3-build python3-cairo
135s   python3-cftime python3-citeproc python3-contourpy python3-cycler
135s   python3-dateutil python3-decorator python3-defusedxml python3-dev
135s   python3-docutils python3-duecredit python3-fasteners python3-fonttools
135s   python3-freetype python3-fs python3-griddataformats python3-h5py
135s   python3-h5py-serial python3-hypothesis python3-imagesize python3-iniconfig
135s   python3-installer python3-joblib python3-kiwisolver python3-latexcodec
135s   python3-looseversion python3-lxml python3-lz4 python3-matplotlib
135s   python3-mda-xdrlib python3-mdanalysis python3-mmtf python3-monotonic
135s   python3-mpmath python3-mrcfile python3-msgpack python3-msmb-theme
135s   python3-netcdf4 python3-networkx python3-numpy python3-packaging
135s   python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk
135s   python3-pluggy python3-pybtex python3-pybtex-docutils
135s   python3-pyproject-hooks python3-pytest python3-reportlab python3-rlpycairo
135s   python3-roman python3-scipy python3-seaborn python3-six python3-sklearn
135s   python3-sklearn-lib python3-snowballstemmer python3-sortedcontainers
135s   python3-sphinx python3-sphinx-rtd-theme python3-sphinx-sitemap
135s   python3-sphinxcontrib.bibtex python3-sphinxcontrib.jquery python3-sympy
135s   python3-threadpoolctl python3-tk python3-toml python3-tqdm python3-tz
135s   python3-ufolib2 python3-unicodedata2 python3-wheel python3.12-dev
135s   python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk
135s   sgml-base sphinx-common sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data
135s   w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev
135s Suggested packages:
135s   autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales
135s   cpp-14-doc cython-doc dh-make flit fonts-freefont-otf | fonts-freefont-ttf
135s   fonts-texgyre gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
135s   gdb-s390x-linux-gnu gettext-doc libasprintf-dev libgettextpo-dev
135s   libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc
135s   liblcms2-utils libstdc++-14-doc tcl8.6 tk8.6 libtool-doc gfortran
135s   | fortran95-compiler gcj-jdk m4-doc libmail-box-perl bwa clustalo clustalw
135s   dialign dssp emboss fasttree mafft muscle3 phylip phyml prank probcons
135s   python3-mysqldb python3-rdflib python3-psycopg2 raxml samtools t-coffee wise
135s   python3-pip python3-venv python-build-doc python-cycler-doc docutils-doc
135s   fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
135s   texlive-latex-base texlive-latex-recommended python-h5py-doc
135s   python-hypothesis-doc python-installer-doc python-joblib-doc
135s   python-latexcodec-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
135s   fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common
135s   python-matplotlib-doc python3-cairocffi python3-gi-cairo python3-gobject
135s   python3-pyqt5 python3-sip python3-tornado texlive-extra-utils
135s   texlive-latex-extra python-mpmath-doc python3-gmpy2 jupyter python3-gdal
135s   python3-pydot python3-pygraphviz gfortran python-numpy-doc python-pandas-doc
135s   python3-statsmodels python-pil-doc python-pybtex-doc
135s   python-pybtex-docutils-doc pdf-viewer python3-egenix-mxtexttools
135s   python-reportlab-doc rl-accel rl-renderpm python-scipy-doc python3-dap
135s   python-sklearn-doc python3-stemmer python-sortedcontainers-doc dvisvgm
135s   fonts-freefont-otf imagemagick-6.q16 latexmk sphinx-doc tex-gyre
135s   texlive-fonts-extra texlive-fonts-recommended texlive-plain-generic
135s   python-sphinxcontrib.bibtex-doc python-sympy-doc tix python3-tk-dbg
135s   python3.13-venv python3.13-doc binfmt-support sgml-base-doc
135s Recommended packages:
135s   libarchive-cpio-perl javascript-common libjson-xs-perl libltdl-dev
135s   libmail-sendmail-perl python-biopython-doc ncbi-blast+ libpaper-utils
135s   python3-click python3-simplejson python3-psutil python3-bs4
135s   python3-cssselect python3-html5lib python3-bottleneck python3-numexpr
135s   python3-odf python3-openpyxl python3-tables python3-olefile
135s   fonts-dejavu-extra isympy-common
135s The following NEW packages will be installed:
135s   autoconf automake autopkgtest-satdep autopoint autotools-dev blt
135s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
135s   cython3 debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism
135s   docutils-common dwz fontconfig-config fonts-dejavu-core fonts-dejavu-mono
135s   fonts-font-awesome fonts-lato fonts-lyx fonts-mathjax fonts-urw-base35 g++
135s   g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
135s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gettext intltool-debian libaec0
135s   libarchive-zip-perl libasan8 libblas3 libcairo2 libcc1-0 libdebhelper-perl
135s   libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
135s   libfontenc1 libfreetype6 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3
135s   libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libisl23
135s   libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui
135s   libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl liblapack3
135s   liblbfgsb0 liblcms2-2 liblzf1 libmpc3 libnetcdf19t64 libopenjp2-7
135s   libpixman-1-0 libpython3-all-dev libpython3-dev libpython3.12-dev
135s   libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib
135s   libqhull-r8.0 libraqm0 libsharpyuv0 libstdc++-14-dev libsz2 libtcl8.6
135s   libtiff6 libtk8.6 libtool libubsan1 libwebp7 libwebpdemux2 libwebpmux3
135s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 m4
135s   po-debconf pybuild-plugin-pyproject python-matplotlib-data
135s   python-mdanalysis-doc python3-alabaster python3-all python3-all-dev
135s   python3-appdirs python3-biopython python3-brotli python3-build python3-cairo
135s   python3-cftime python3-citeproc python3-contourpy python3-cycler
135s   python3-dateutil python3-decorator python3-defusedxml python3-dev
135s   python3-docutils python3-duecredit python3-fasteners python3-fonttools
135s   python3-freetype python3-fs python3-griddataformats python3-h5py
135s   python3-h5py-serial python3-hypothesis python3-imagesize python3-iniconfig
135s   python3-installer python3-joblib python3-kiwisolver python3-latexcodec
135s   python3-looseversion python3-lxml python3-lz4 python3-matplotlib
135s   python3-mda-xdrlib python3-mdanalysis python3-mmtf python3-monotonic
135s   python3-mpmath python3-mrcfile python3-msgpack python3-msmb-theme
135s   python3-netcdf4 python3-networkx python3-numpy python3-packaging
135s   python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk
135s   python3-pluggy python3-pybtex python3-pybtex-docutils
135s   python3-pyproject-hooks python3-pytest python3-reportlab python3-rlpycairo
135s   python3-roman python3-scipy python3-seaborn python3-six python3-sklearn
135s   python3-sklearn-lib python3-snowballstemmer python3-sortedcontainers
135s   python3-sphinx python3-sphinx-rtd-theme python3-sphinx-sitemap
135s   python3-sphinxcontrib.bibtex python3-sphinxcontrib.jquery python3-sympy
135s   python3-threadpoolctl python3-tk python3-toml python3-tqdm python3-tz
135s   python3-ufolib2 python3-unicodedata2 python3-wheel python3.12-dev
135s   python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk
135s   sgml-base sphinx-common sphinx-rtd-theme-common tk8.6-blt2.5 unicode-data
135s   w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core zlib1g-dev
135s 0 upgraded, 206 newly installed, 0 to remove and 0 not upgraded.
135s Need to get 205 MB/205 MB of archives.
135s After this operation, 848 MB of additional disk space will be used.
135s Get:1 /tmp/autopkgtest.oSsbzq/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [1004 B]
136s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-lato all 2.015-1 [2781 kB]
136s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB]
136s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB]
136s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x sgml-base all 1.31 [11.4 kB]
136s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x m4 s390x 1.4.19-4build1 [256 kB]
136s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x autoconf all 2.72-3 [382 kB]
136s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x autotools-dev all 20220109.1 [44.9 kB]
136s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x automake all 1:1.16.5-1.3ubuntu1 [558 kB]
136s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x autopoint all 0.22.5-2 [616 kB]
136s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.15+dfsg-2 [1034 kB]
136s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
136s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
136s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
136s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB]
136s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
136s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB]
136s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x xfonts-utils s390x 1:7.7+7 [101 kB]
136s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB]
137s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB]
137s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB]
137s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
137s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
137s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
137s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.15-1 [828 kB]
137s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-7build1 [662 kB]
137s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x blt s390x 2.5.3+dfsg-7build1 [4840 B]
137s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
137s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
137s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [9570 kB]
137s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-8ubuntu1 [1026 B]
137s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B]
137s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB]
137s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-8ubuntu1 [50.6 kB]
137s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-8ubuntu1 [151 kB]
137s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-8ubuntu1 [30.9 kB]
137s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-8ubuntu1 [2963 kB]
137s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-8ubuntu1 [1184 kB]
137s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-8ubuntu1 [1037 kB]
137s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [18.7 MB]
137s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-8ubuntu1 [518 kB]
137s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B]
137s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B]
137s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-8ubuntu1 [2608 kB]
138s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-8ubuntu1 [11.0 MB]
138s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-8ubuntu1 [19.9 kB]
138s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B]
138s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B]
138s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
138s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x cython3 s390x 3.0.11+dfsg-1ubuntu1 [2524 kB]
138s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
138s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libtool all 2.4.7-7build1 [166 kB]
138s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x dh-autoreconf all 20 [16.1 kB]
138s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB]
138s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
138s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x dh-strip-nondeterminism all 1.14.0-1 [5058 B]
138s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x debugedit s390x 1:5.1-1 [49.9 kB]
138s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x dwz s390x 0.15-1build6 [122 kB]
138s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x gettext s390x 0.22.5-2 [996 kB]
138s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB]
138s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x po-debconf all 1.0.21+nmu1 [233 kB]
138s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x debhelper all 13.20ubuntu1 [893 kB]
138s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x dh-python all 6.20241024 [112 kB]
138s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x xml-core all 0.19 [20.3 kB]
138s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x docutils-common all 0.21.2+dfsg-2 [131 kB]
138s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
138s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lyx all 2.4.2.1-1 [171 kB]
138s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
138s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB]
138s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB]
138s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
138s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
138s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
138s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
138s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB]
138s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x libexpat1-dev s390x 2.6.2-2 [146 kB]
138s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB]
138s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
138s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.0.1-1 [536 kB]
138s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B]
138s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-4ubuntu3 [1426 kB]
138s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-100t64 s390x 1.10.10+repack-4ubuntu3 [58.0 kB]
138s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB]
138s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB]
138s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
138s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
138s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
138s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB]
138s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-sphinxdoc all 7.4.7-4 [158 kB]
138s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libjson-perl all 4.10000-1 [81.9 kB]
138s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB]
138s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB]
138s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB]
138s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x liblzf1 s390x 3.6-4 [7020 B]
138s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x libnetcdf19t64 s390x 1:4.9.2-6ubuntu1 [496 kB]
138s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
138s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.12-dev s390x 3.12.7-3 [5838 kB]
139s Get:98 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-dev s390x 3.12.7-1 [10.3 kB]
139s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB]
139s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13 s390x 3.13.0-2 [2477 kB]
139s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-dev s390x 3.13.0-2 [5586 kB]
139s Get:102 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-all-dev s390x 3.12.7-1 [918 B]
139s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB]
139s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.1-1build1 [16.2 kB]
139s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB]
139s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
139s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB]
139s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
139s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB]
139s Get:110 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB]
139s Get:111 http://ftpmaster.internal/ubuntu plucky/main s390x libxslt1.1 s390x 1.1.39-0exp1ubuntu1 [169 kB]
139s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB]
139s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
139s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-toml all 0.10.2-1 [16.5 kB]
139s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-wheel all 0.44.0-1 [54.2 kB]
139s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-build all 1.2.2-1 [31.0 kB]
139s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
139s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x pybuild-plugin-pyproject all 6.20241024 [1728 B]
139s Get:119 http://ftpmaster.internal/ubuntu plucky/universe s390x python-matplotlib-data all 3.8.3-3 [2928 kB]
139s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
140s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x python-mdanalysis-doc all 2.7.0-5 [2323 kB]
140s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB]
140s Get:123 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B]
140s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-dev s390x 3.12.7-3 [505 kB]
140s Get:125 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-dev s390x 3.12.7-1 [26.7 kB]
140s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-dev s390x 3.13.0-2 [507 kB]
140s Get:127 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all-dev s390x 3.12.7-1 [914 B]
140s Get:128 http://ftpmaster.internal/ubuntu plucky/main s390x python3-appdirs all 1.4.4-4 [10.9 kB]
140s Get:129 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB]
140s Get:130 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-tk s390x 3.12.7-3 [117 kB]
140s Get:131 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-tk s390x 3.13.0-2 [107 kB]
140s Get:132 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-tk s390x 3.12.7-1 [9750 B]
140s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pil.imagetk s390x 10.4.0-1ubuntu1 [9314 B]
140s Get:134 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu1 [208 kB]
140s Get:135 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu1 [492 kB]
140s Get:136 http://ftpmaster.internal/ubuntu plucky/main s390x python3-cairo s390x 1.26.1-2 [119 kB]
140s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-freetype all 2.5.1-1 [92.3 kB]
140s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B]
140s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-reportlab all 4.2.5-1 [1107 kB]
140s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x w3c-sgml-lib all 1.3-3 [280 kB]
140s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-biopython s390x 1.84+dfsg-4 [1721 kB]
140s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-brotli s390x 1.1.0-2build2 [376 kB]
140s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cftime s390x 1.6.4-1 [215 kB]
140s Get:144 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lxml s390x 5.3.0-1 [1314 kB]
140s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-citeproc all 0.6.0-3 [98.4 kB]
140s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-contourpy s390x 1.3.0-2 [195 kB]
140s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cycler all 0.12.1-1 [9716 B]
140s Get:148 http://ftpmaster.internal/ubuntu plucky/main s390x python3-six all 1.16.0-7 [13.1 kB]
140s Get:149 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-2 [80.3 kB]
140s Get:150 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB]
140s Get:151 http://ftpmaster.internal/ubuntu plucky/main s390x python3-defusedxml all 0.7.1-2 [42.0 kB]
140s Get:152 http://ftpmaster.internal/ubuntu plucky/main s390x python3-roman all 4.2-1 [10.0 kB]
140s Get:153 http://ftpmaster.internal/ubuntu plucky/main s390x python3-docutils all 0.21.2+dfsg-2 [409 kB]
140s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-looseversion all 1.3.0-3 [8354 B]
140s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-duecredit all 0.10.2-2 [66.0 kB]
140s Get:156 http://ftpmaster.internal/ubuntu plucky/main s390x python3-monotonic all 1.6-2 [5732 B]
140s Get:157 http://ftpmaster.internal/ubuntu plucky/main s390x python3-fasteners all 0.18-2 [12.5 kB]
140s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5 [17.5 MB]
141s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB]
141s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mpmath all 1.3.0-1 [425 kB]
141s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sympy all 1.13.3-1 [4228 kB]
141s Get:162 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2024.1-2 [31.4 kB]
141s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fs all 2.4.16-4 [91.3 kB]
141s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-lz4 s390x 4.0.2+dfsg-1build4 [26.4 kB]
141s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-unicodedata2 s390x 15.1.0+ds-1build1 [367 kB]
141s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x unicode-data all 15.1.0-1 [8878 kB]
141s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fonttools s390x 4.46.0-1build2 [1453 kB]
141s Get:168 http://ftpmaster.internal/ubuntu plucky/main s390x sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB]
141s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mrcfile all 1.5.3-3 [114 kB]
141s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-griddataformats all 1.0.2-2 [2107 kB]
141s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-h5py-serial s390x 3.11.0-5ubuntu1 [1151 kB]
141s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-h5py all 3.11.0-5ubuntu1 [7974 B]
141s Get:173 http://ftpmaster.internal/ubuntu plucky/main s390x python3-sortedcontainers all 2.4.0-2 [27.6 kB]
141s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-hypothesis all 6.116.0-1 [326 kB]
141s Get:175 http://ftpmaster.internal/ubuntu plucky/main s390x python3-imagesize all 1.4.1-1 [6844 B]
141s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B]
141s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.3.2-5 [206 kB]
141s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-kiwisolver s390x 1.4.7-2 [54.9 kB]
141s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-latexcodec all 3.0.0-1 [16.6 kB]
141s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib s390x 3.8.3-3 [4554 kB]
141s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mda-xdrlib all 0.2.0-3 [11.4 kB]
141s Get:182 http://ftpmaster.internal/ubuntu plucky/main s390x python3-msgpack s390x 1.0.3-3build2 [85.0 kB]
141s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mmtf all 1.1.3-1 [16.2 kB]
141s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-threadpoolctl all 3.1.0-1 [21.3 kB]
141s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-tqdm all 4.67.0-1 [91.6 kB]
141s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mdanalysis s390x 2.7.0-5 [1911 kB]
141s Get:187 http://ftpmaster.internal/ubuntu plucky/main s390x sphinx-common all 7.4.7-4 [775 kB]
141s Get:188 http://ftpmaster.internal/ubuntu plucky/main s390x python3-alabaster all 0.7.16-0.1 [18.5 kB]
141s Get:189 http://ftpmaster.internal/ubuntu plucky/main s390x python3-snowballstemmer all 2.2.0-4build1 [59.8 kB]
141s Get:190 http://ftpmaster.internal/ubuntu plucky/main s390x python3-sphinx all 7.4.7-4 [593 kB]
141s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinxcontrib.jquery all 4.1-5 [6678 B]
141s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [23.5 kB]
141s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-msmb-theme all 1.2.0-4 [35.4 kB]
141s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-netcdf4 s390x 1.7.2-1 [628 kB]
142s Get:195 http://ftpmaster.internal/ubuntu plucky/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB]
142s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas-lib s390x 2.2.3+dfsg-5 [4938 kB]
142s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas all 2.2.3+dfsg-5 [3112 kB]
142s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB]
142s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybtex all 0.24.0-4 [70.0 kB]
142s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybtex-docutils all 1.0.2-1 [7176 B]
142s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB]
142s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-seaborn all 0.13.2-4 [225 kB]
142s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn-lib s390x 1.4.2+dfsg-6 [4036 kB]
142s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn all 1.4.2+dfsg-6 [2257 kB]
143s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinx-sitemap all 2.6.0-1 [6674 B]
143s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sphinxcontrib.bibtex all 2.6.2-1 [25.2 kB]
143s Fetched 205 MB in 8s (27.3 MB/s)
143s Selecting previously unselected package fonts-lato.
144s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55517 files and directories currently installed.)
144s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ...
144s Unpacking fonts-lato (2.015-1) ...
144s Selecting previously unselected package libpython3.13-minimal:s390x.
144s Preparing to unpack .../001-libpython3.13-minimal_3.13.0-2_s390x.deb ...
144s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ...
144s Selecting previously unselected package python3.13-minimal.
144s Preparing to unpack .../002-python3.13-minimal_3.13.0-2_s390x.deb ...
144s Unpacking python3.13-minimal (3.13.0-2) ...
144s Selecting previously unselected package sgml-base.
144s Preparing to unpack .../003-sgml-base_1.31_all.deb ...
144s Unpacking sgml-base (1.31) ...
144s Selecting previously unselected package m4.
144s Preparing to unpack .../004-m4_1.4.19-4build1_s390x.deb ...
144s Unpacking m4 (1.4.19-4build1) ...
144s Selecting previously unselected package autoconf.
144s Preparing to unpack .../005-autoconf_2.72-3_all.deb ...
144s Unpacking autoconf (2.72-3) ...
144s Selecting previously unselected package autotools-dev.
144s Preparing to unpack .../006-autotools-dev_20220109.1_all.deb ...
144s Unpacking autotools-dev (20220109.1) ...
144s Selecting previously unselected package automake.
144s Preparing to unpack .../007-automake_1%3a1.16.5-1.3ubuntu1_all.deb ...
144s Unpacking automake (1:1.16.5-1.3ubuntu1) ...
144s Selecting previously unselected package autopoint.
144s Preparing to unpack .../008-autopoint_0.22.5-2_all.deb ...
144s Unpacking autopoint (0.22.5-2) ...
144s Selecting previously unselected package libtcl8.6:s390x.
144s Preparing to unpack .../009-libtcl8.6_8.6.15+dfsg-2_s390x.deb ...
144s Unpacking libtcl8.6:s390x (8.6.15+dfsg-2) ...
144s Selecting previously unselected package libfreetype6:s390x.
144s Preparing to unpack .../010-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
144s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
144s Selecting previously unselected package fonts-dejavu-mono.
144s Preparing to unpack .../011-fonts-dejavu-mono_2.37-8_all.deb ...
144s Unpacking fonts-dejavu-mono (2.37-8) ...
144s Selecting previously unselected package fonts-dejavu-core.
144s Preparing to unpack .../012-fonts-dejavu-core_2.37-8_all.deb ...
144s Unpacking fonts-dejavu-core (2.37-8) ...
144s Selecting previously unselected package libfontenc1:s390x.
144s Preparing to unpack .../013-libfontenc1_1%3a1.1.8-1build1_s390x.deb ...
144s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ...
144s Selecting previously unselected package x11-common.
144s Preparing to unpack .../014-x11-common_1%3a7.7+23ubuntu3_all.deb ...
144s Unpacking x11-common (1:7.7+23ubuntu3) ...
144s Selecting previously unselected package xfonts-encodings.
144s Preparing to unpack .../015-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ...
144s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ...
144s Selecting previously unselected package xfonts-utils.
144s Preparing to unpack .../016-xfonts-utils_1%3a7.7+7_s390x.deb ...
144s Unpacking xfonts-utils (1:7.7+7) ...
144s Selecting previously unselected package fonts-urw-base35.
144s Preparing to unpack .../017-fonts-urw-base35_20200910-8_all.deb ...
144s Unpacking fonts-urw-base35 (20200910-8) ...
144s Selecting previously unselected package fontconfig-config.
144s Preparing to unpack .../018-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ...
144s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
144s Selecting previously unselected package libfontconfig1:s390x.
144s Preparing to unpack .../019-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ...
144s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ...
144s Selecting previously unselected package libxrender1:s390x.
144s Preparing to unpack .../020-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
144s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
144s Selecting previously unselected package libxft2:s390x.
144s Preparing to unpack .../021-libxft2_2.3.6-1build1_s390x.deb ...
144s Unpacking libxft2:s390x (2.3.6-1build1) ...
144s Selecting previously unselected package libxss1:s390x.
144s Preparing to unpack .../022-libxss1_1%3a1.2.3-1build3_s390x.deb ...
144s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
144s Selecting previously unselected package libtk8.6:s390x.
144s Preparing to unpack .../023-libtk8.6_8.6.15-1_s390x.deb ...
144s Unpacking libtk8.6:s390x (8.6.15-1) ...
144s Selecting previously unselected package tk8.6-blt2.5.
144s Preparing to unpack .../024-tk8.6-blt2.5_2.5.3+dfsg-7build1_s390x.deb ...
144s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ...
144s Selecting previously unselected package blt.
144s Preparing to unpack .../025-blt_2.5.3+dfsg-7build1_s390x.deb ...
144s Unpacking blt (2.5.3+dfsg-7build1) ...
144s Selecting previously unselected package libisl23:s390x.
144s Preparing to unpack .../026-libisl23_0.27-1_s390x.deb ...
144s Unpacking libisl23:s390x (0.27-1) ...
144s Selecting previously unselected package libmpc3:s390x.
144s Preparing to unpack .../027-libmpc3_1.3.1-1build2_s390x.deb ...
144s Unpacking libmpc3:s390x (1.3.1-1build2) ...
144s Selecting previously unselected package cpp-14-s390x-linux-gnu.
144s Preparing to unpack .../028-cpp-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ...
144s Unpacking cpp-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package cpp-14.
145s Preparing to unpack .../029-cpp-14_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking cpp-14 (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package cpp-s390x-linux-gnu.
145s Preparing to unpack .../030-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package cpp.
145s Preparing to unpack .../031-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking cpp (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package libcc1-0:s390x.
145s Preparing to unpack .../032-libcc1-0_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libcc1-0:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package libgomp1:s390x.
145s Preparing to unpack .../033-libgomp1_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libgomp1:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package libitm1:s390x.
145s Preparing to unpack .../034-libitm1_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libitm1:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package libasan8:s390x.
145s Preparing to unpack .../035-libasan8_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libasan8:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package libubsan1:s390x.
145s Preparing to unpack .../036-libubsan1_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libubsan1:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package libgcc-14-dev:s390x.
145s Preparing to unpack .../037-libgcc-14-dev_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libgcc-14-dev:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package gcc-14-s390x-linux-gnu.
145s Preparing to unpack .../038-gcc-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking gcc-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package gcc-14.
145s Preparing to unpack .../039-gcc-14_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking gcc-14 (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package gcc-s390x-linux-gnu.
145s Preparing to unpack .../040-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package gcc.
145s Preparing to unpack .../041-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking gcc (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package libstdc++-14-dev:s390x.
145s Preparing to unpack .../042-libstdc++-14-dev_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking libstdc++-14-dev:s390x (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package g++-14-s390x-linux-gnu.
145s Preparing to unpack .../043-g++-14-s390x-linux-gnu_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking g++-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package g++-14.
145s Preparing to unpack .../044-g++-14_14.2.0-8ubuntu1_s390x.deb ...
145s Unpacking g++-14 (14.2.0-8ubuntu1) ...
145s Selecting previously unselected package g++-s390x-linux-gnu.
145s Preparing to unpack .../045-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package g++.
145s Preparing to unpack .../046-g++_4%3a14.1.0-2ubuntu1_s390x.deb ...
145s Unpacking g++ (4:14.1.0-2ubuntu1) ...
145s Selecting previously unselected package build-essential.
145s Preparing to unpack .../047-build-essential_12.10ubuntu1_s390x.deb ...
145s Unpacking build-essential (12.10ubuntu1) ...
145s Selecting previously unselected package cython3.
145s Preparing to unpack .../048-cython3_3.0.11+dfsg-1ubuntu1_s390x.deb ...
145s Unpacking cython3 (3.0.11+dfsg-1ubuntu1) ...
145s Selecting previously unselected package libdebhelper-perl.
145s Preparing to unpack .../049-libdebhelper-perl_13.20ubuntu1_all.deb ...
145s Unpacking libdebhelper-perl (13.20ubuntu1) ...
145s Selecting previously unselected package libtool.
145s Preparing to unpack .../050-libtool_2.4.7-7build1_all.deb ...
145s Unpacking libtool (2.4.7-7build1) ...
145s Selecting previously unselected package dh-autoreconf.
145s Preparing to unpack .../051-dh-autoreconf_20_all.deb ...
145s Unpacking dh-autoreconf (20) ...
145s Selecting previously unselected package libarchive-zip-perl.
145s Preparing to unpack .../052-libarchive-zip-perl_1.68-1_all.deb ...
145s Unpacking libarchive-zip-perl (1.68-1) ...
145s Selecting previously unselected package libfile-stripnondeterminism-perl.
146s Preparing to unpack .../053-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ...
146s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ...
146s Selecting previously unselected package dh-strip-nondeterminism.
146s Preparing to unpack .../054-dh-strip-nondeterminism_1.14.0-1_all.deb ...
146s Unpacking dh-strip-nondeterminism (1.14.0-1) ...
146s Selecting previously unselected package debugedit.
146s Preparing to unpack .../055-debugedit_1%3a5.1-1_s390x.deb ...
146s Unpacking debugedit (1:5.1-1) ...
146s Selecting previously unselected package dwz.
146s Preparing to unpack .../056-dwz_0.15-1build6_s390x.deb ...
146s Unpacking dwz (0.15-1build6) ...
146s Selecting previously unselected package gettext.
146s Preparing to unpack .../057-gettext_0.22.5-2_s390x.deb ...
146s Unpacking gettext (0.22.5-2) ...
146s Selecting previously unselected package intltool-debian.
146s Preparing to unpack .../058-intltool-debian_0.35.0+20060710.6_all.deb ...
146s Unpacking intltool-debian (0.35.0+20060710.6) ...
146s Selecting previously unselected package po-debconf.
146s Preparing to unpack .../059-po-debconf_1.0.21+nmu1_all.deb ...
146s Unpacking po-debconf (1.0.21+nmu1) ...
146s Selecting previously unselected package debhelper.
146s Preparing to unpack .../060-debhelper_13.20ubuntu1_all.deb ...
146s Unpacking debhelper (13.20ubuntu1) ...
146s Selecting previously unselected package dh-python.
146s Preparing to unpack .../061-dh-python_6.20241024_all.deb ...
146s Unpacking dh-python (6.20241024) ...
146s Selecting previously unselected package xml-core.
146s Preparing to unpack .../062-xml-core_0.19_all.deb ...
146s Unpacking xml-core (0.19) ...
146s Selecting previously unselected package docutils-common.
146s Preparing to unpack .../063-docutils-common_0.21.2+dfsg-2_all.deb ...
146s Unpacking docutils-common (0.21.2+dfsg-2) ...
146s Selecting previously unselected package fonts-font-awesome.
146s Preparing to unpack .../064-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
146s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
146s Selecting previously unselected package fonts-lyx.
146s Preparing to unpack .../065-fonts-lyx_2.4.2.1-1_all.deb ...
146s Unpacking fonts-lyx (2.4.2.1-1) ...
146s Selecting previously unselected package fonts-mathjax.
146s Preparing to unpack .../066-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
146s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
146s Selecting previously unselected package libaec0:s390x.
146s Preparing to unpack .../067-libaec0_1.1.3-1_s390x.deb ...
146s Unpacking libaec0:s390x (1.1.3-1) ...
146s Selecting previously unselected package libblas3:s390x.
146s Preparing to unpack .../068-libblas3_3.12.0-3build2_s390x.deb ...
146s Unpacking libblas3:s390x (3.12.0-3build2) ...
146s Selecting previously unselected package libpixman-1-0:s390x.
146s Preparing to unpack .../069-libpixman-1-0_0.44.0-3_s390x.deb ...
146s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
146s Selecting previously unselected package libxcb-render0:s390x.
146s Preparing to unpack .../070-libxcb-render0_1.17.0-2_s390x.deb ...
146s Unpacking libxcb-render0:s390x (1.17.0-2) ...
146s Selecting previously unselected package libxcb-shm0:s390x.
146s Preparing to unpack .../071-libxcb-shm0_1.17.0-2_s390x.deb ...
146s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
146s Selecting previously unselected package libcairo2:s390x.
146s Preparing to unpack .../072-libcairo2_1.18.2-2_s390x.deb ...
146s Unpacking libcairo2:s390x (1.18.2-2) ...
146s Selecting previously unselected package libdeflate0:s390x.
146s Preparing to unpack .../073-libdeflate0_1.22-1_s390x.deb ...
146s Unpacking libdeflate0:s390x (1.22-1) ...
146s Selecting previously unselected package libexpat1-dev:s390x.
146s Preparing to unpack .../074-libexpat1-dev_2.6.2-2_s390x.deb ...
146s Unpacking libexpat1-dev:s390x (2.6.2-2) ...
146s Selecting previously unselected package libgfortran5:s390x.
146s Preparing to unpack .../075-libgfortran5_14.2.0-8ubuntu1_s390x.deb ...
146s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ...
146s Selecting previously unselected package libgraphite2-3:s390x.
146s Preparing to unpack .../076-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
146s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
146s Selecting previously unselected package libharfbuzz0b:s390x.
146s Preparing to unpack .../077-libharfbuzz0b_10.0.1-1_s390x.deb ...
146s Unpacking libharfbuzz0b:s390x (10.0.1-1) ...
146s Selecting previously unselected package libsz2:s390x.
146s Preparing to unpack .../078-libsz2_1.1.3-1_s390x.deb ...
146s Unpacking libsz2:s390x (1.1.3-1) ...
146s Selecting previously unselected package libhdf5-103-1t64:s390x.
146s Preparing to unpack .../079-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_s390x.deb ...
146s Unpacking libhdf5-103-1t64:s390x (1.10.10+repack-4ubuntu3) ...
146s Selecting previously unselected package libhdf5-hl-100t64:s390x.
146s Preparing to unpack .../080-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_s390x.deb ...
146s Unpacking libhdf5-hl-100t64:s390x (1.10.10+repack-4ubuntu3) ...
146s Selecting previously unselected package libimagequant0:s390x.
146s Preparing to unpack .../081-libimagequant0_2.18.0-1build1_s390x.deb ...
146s Unpacking libimagequant0:s390x (2.18.0-1build1) ...
146s Selecting previously unselected package libjpeg-turbo8:s390x.
146s Preparing to unpack .../082-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ...
146s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ...
146s Selecting previously unselected package libjpeg8:s390x.
146s Preparing to unpack .../083-libjpeg8_8c-2ubuntu11_s390x.deb ...
146s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
146s Selecting previously unselected package libjs-jquery.
146s Preparing to unpack .../084-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
146s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
146s Selecting previously unselected package libjs-jquery-ui.
146s Preparing to unpack .../085-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
146s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
146s Selecting previously unselected package libjs-underscore.
146s Preparing to unpack .../086-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
146s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
146s Selecting previously unselected package libjs-sphinxdoc.
146s Preparing to unpack .../087-libjs-sphinxdoc_7.4.7-4_all.deb ...
146s Unpacking libjs-sphinxdoc (7.4.7-4) ...
146s Selecting previously unselected package libjson-perl.
146s Preparing to unpack .../088-libjson-perl_4.10000-1_all.deb ...
146s Unpacking libjson-perl (4.10000-1) ...
146s Selecting previously unselected package liblapack3:s390x.
146s Preparing to unpack .../089-liblapack3_3.12.0-3build2_s390x.deb ...
146s Unpacking liblapack3:s390x (3.12.0-3build2) ...
146s Selecting previously unselected package liblbfgsb0:s390x.
146s Preparing to unpack .../090-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ...
146s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ...
146s Selecting previously unselected package liblcms2-2:s390x.
146s Preparing to unpack .../091-liblcms2-2_2.16-2_s390x.deb ...
146s Unpacking liblcms2-2:s390x (2.16-2) ...
146s Selecting previously unselected package liblzf1:s390x.
146s Preparing to unpack .../092-liblzf1_3.6-4_s390x.deb ...
146s Unpacking liblzf1:s390x (3.6-4) ...
146s Selecting previously unselected package libnetcdf19t64:s390x.
146s Preparing to unpack .../093-libnetcdf19t64_1%3a4.9.2-6ubuntu1_s390x.deb ...
146s Unpacking libnetcdf19t64:s390x (1:4.9.2-6ubuntu1) ...
146s Selecting previously unselected package zlib1g-dev:s390x.
146s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
146s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
146s Selecting previously unselected package libpython3.12-dev:s390x.
146s Preparing to unpack .../095-libpython3.12-dev_3.12.7-3_s390x.deb ...
146s Unpacking libpython3.12-dev:s390x (3.12.7-3) ...
146s Selecting previously unselected package libpython3-dev:s390x.
146s Preparing to unpack .../096-libpython3-dev_3.12.7-1_s390x.deb ...
146s Unpacking libpython3-dev:s390x (3.12.7-1) ...
147s Selecting previously unselected package libpython3.13-stdlib:s390x.
147s Preparing to unpack .../097-libpython3.13-stdlib_3.13.0-2_s390x.deb ...
147s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ...
147s Selecting previously unselected package libpython3.13:s390x.
147s Preparing to unpack .../098-libpython3.13_3.13.0-2_s390x.deb ...
147s Unpacking libpython3.13:s390x (3.13.0-2) ...
147s Selecting previously unselected package libpython3.13-dev:s390x.
147s Preparing to unpack .../099-libpython3.13-dev_3.13.0-2_s390x.deb ...
147s Unpacking libpython3.13-dev:s390x (3.13.0-2) ...
147s Selecting previously unselected package libpython3-all-dev:s390x.
147s Preparing to unpack .../100-libpython3-all-dev_3.12.7-1_s390x.deb ...
147s Unpacking libpython3-all-dev:s390x (3.12.7-1) ...
147s Selecting previously unselected package libqhull-r8.0:s390x.
147s Preparing to unpack .../101-libqhull-r8.0_2020.2-6build1_s390x.deb ...
147s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ...
147s Selecting previously unselected package libraqm0:s390x.
147s Preparing to unpack .../102-libraqm0_0.10.1-1build1_s390x.deb ...
147s Unpacking libraqm0:s390x (0.10.1-1build1) ...
147s Selecting previously unselected package libsharpyuv0:s390x.
147s Preparing to unpack .../103-libsharpyuv0_1.4.0-0.1_s390x.deb ...
147s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ...
147s Selecting previously unselected package libjbig0:s390x.
147s Preparing to unpack .../104-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
147s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
147s Selecting previously unselected package libwebp7:s390x.
147s Preparing to unpack .../105-libwebp7_1.4.0-0.1_s390x.deb ...
147s Unpacking libwebp7:s390x (1.4.0-0.1) ...
147s Selecting previously unselected package libtiff6:s390x.
147s Preparing to unpack .../106-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
147s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
147s Selecting previously unselected package libwebpdemux2:s390x.
147s Preparing to unpack .../107-libwebpdemux2_1.4.0-0.1_s390x.deb ...
147s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ...
147s Selecting previously unselected package libwebpmux3:s390x.
147s Preparing to unpack .../108-libwebpmux3_1.4.0-0.1_s390x.deb ...
147s Unpacking libwebpmux3:s390x (1.4.0-0.1) ...
147s Selecting previously unselected package libxslt1.1:s390x.
147s Preparing to unpack .../109-libxslt1.1_1.1.39-0exp1ubuntu1_s390x.deb ...
147s Unpacking libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ...
147s Selecting previously unselected package python3-packaging.
147s Preparing to unpack .../110-python3-packaging_24.1-1_all.deb ...
147s Unpacking python3-packaging (24.1-1) ...
147s Selecting previously unselected package python3-pyproject-hooks.
147s Preparing to unpack .../111-python3-pyproject-hooks_1.2.0-1_all.deb ...
147s Unpacking python3-pyproject-hooks (1.2.0-1) ...
147s Selecting previously unselected package python3-toml.
147s Preparing to unpack .../112-python3-toml_0.10.2-1_all.deb ...
147s Unpacking python3-toml (0.10.2-1) ...
147s Selecting previously unselected package python3-wheel.
147s Preparing to unpack .../113-python3-wheel_0.44.0-1_all.deb ...
147s Unpacking python3-wheel (0.44.0-1) ...
147s Selecting previously unselected package python3-build.
147s Preparing to unpack .../114-python3-build_1.2.2-1_all.deb ...
147s Unpacking python3-build (1.2.2-1) ...
147s Selecting previously unselected package python3-installer.
147s Preparing to unpack .../115-python3-installer_0.7.0+dfsg1-3_all.deb ...
147s Unpacking python3-installer (0.7.0+dfsg1-3) ...
147s Selecting previously unselected package pybuild-plugin-pyproject.
147s Preparing to unpack .../116-pybuild-plugin-pyproject_6.20241024_all.deb ...
147s Unpacking pybuild-plugin-pyproject (6.20241024) ...
147s Selecting previously unselected package python-matplotlib-data.
147s Preparing to unpack .../117-python-matplotlib-data_3.8.3-3_all.deb ...
147s Unpacking python-matplotlib-data (3.8.3-3) ...
147s Selecting previously unselected package libjs-mathjax.
147s Preparing to unpack .../118-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
147s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
147s Selecting previously unselected package python-mdanalysis-doc.
147s Preparing to unpack .../119-python-mdanalysis-doc_2.7.0-5_all.deb ...
147s Unpacking python-mdanalysis-doc (2.7.0-5) ...
148s Selecting previously unselected package python3.13.
148s Preparing to unpack .../120-python3.13_3.13.0-2_s390x.deb ...
148s Unpacking python3.13 (3.13.0-2) ...
148s Selecting previously unselected package python3-all.
148s Preparing to unpack .../121-python3-all_3.12.7-1_s390x.deb ...
148s Unpacking python3-all (3.12.7-1) ...
148s Selecting previously unselected package python3.12-dev.
148s Preparing to unpack .../122-python3.12-dev_3.12.7-3_s390x.deb ...
148s Unpacking python3.12-dev (3.12.7-3) ...
148s Selecting previously unselected package python3-dev.
148s Preparing to unpack .../123-python3-dev_3.12.7-1_s390x.deb ...
148s Unpacking python3-dev (3.12.7-1) ...
148s Selecting previously unselected package python3.13-dev.
148s Preparing to unpack .../124-python3.13-dev_3.13.0-2_s390x.deb ...
148s Unpacking python3.13-dev (3.13.0-2) ...
148s Selecting previously unselected package python3-all-dev.
148s Preparing to unpack .../125-python3-all-dev_3.12.7-1_s390x.deb ...
148s Unpacking python3-all-dev (3.12.7-1) ...
148s Selecting previously unselected package python3-appdirs.
148s Preparing to unpack .../126-python3-appdirs_1.4.4-4_all.deb ...
148s Unpacking python3-appdirs (1.4.4-4) ...
148s Selecting previously unselected package python3-numpy.
148s Preparing to unpack .../127-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ...
148s Unpacking python3-numpy (1:1.26.4+ds-11build1) ...
148s Selecting previously unselected package python3.12-tk.
148s Preparing to unpack .../128-python3.12-tk_3.12.7-3_s390x.deb ...
148s Unpacking python3.12-tk (3.12.7-3) ...
148s Selecting previously unselected package python3.13-tk.
148s Preparing to unpack .../129-python3.13-tk_3.13.0-2_s390x.deb ...
148s Unpacking python3.13-tk (3.13.0-2) ...
148s Selecting previously unselected package python3-tk:s390x.
148s Preparing to unpack .../130-python3-tk_3.12.7-1_s390x.deb ...
148s Unpacking python3-tk:s390x (3.12.7-1) ...
148s Selecting previously unselected package python3-pil.imagetk:s390x.
148s Preparing to unpack .../131-python3-pil.imagetk_10.4.0-1ubuntu1_s390x.deb ...
148s Unpacking python3-pil.imagetk:s390x (10.4.0-1ubuntu1) ...
148s Selecting previously unselected package libopenjp2-7:s390x.
148s Preparing to unpack .../132-libopenjp2-7_2.5.0-2ubuntu1_s390x.deb ...
148s Unpacking libopenjp2-7:s390x (2.5.0-2ubuntu1) ...
148s Selecting previously unselected package python3-pil:s390x.
148s Preparing to unpack .../133-python3-pil_10.4.0-1ubuntu1_s390x.deb ...
148s Unpacking python3-pil:s390x (10.4.0-1ubuntu1) ...
148s Selecting previously unselected package python3-cairo.
148s Preparing to unpack .../134-python3-cairo_1.26.1-2_s390x.deb ...
148s Unpacking python3-cairo (1.26.1-2) ...
148s Selecting previously unselected package python3-freetype.
148s Preparing to unpack .../135-python3-freetype_2.5.1-1_all.deb ...
148s Unpacking python3-freetype (2.5.1-1) ...
148s Selecting previously unselected package python3-rlpycairo.
148s Preparing to unpack .../136-python3-rlpycairo_0.3.0-3_all.deb ...
148s Unpacking python3-rlpycairo (0.3.0-3) ...
148s Selecting previously unselected package python3-reportlab.
148s Preparing to unpack .../137-python3-reportlab_4.2.5-1_all.deb ...
148s Unpacking python3-reportlab (4.2.5-1) ...
148s Selecting previously unselected package w3c-sgml-lib.
148s Preparing to unpack .../138-w3c-sgml-lib_1.3-3_all.deb ...
148s Unpacking w3c-sgml-lib (1.3-3) ...
148s Selecting previously unselected package python3-biopython.
148s Preparing to unpack .../139-python3-biopython_1.84+dfsg-4_s390x.deb ...
148s Unpacking python3-biopython (1.84+dfsg-4) ...
148s Selecting previously unselected package python3-brotli.
148s Preparing to unpack .../140-python3-brotli_1.1.0-2build2_s390x.deb ...
148s Unpacking python3-brotli (1.1.0-2build2) ...
148s Selecting previously unselected package python3-cftime.
148s Preparing to unpack .../141-python3-cftime_1.6.4-1_s390x.deb ...
148s Unpacking python3-cftime (1.6.4-1) ...
148s Selecting previously unselected package python3-lxml:s390x.
148s Preparing to unpack .../142-python3-lxml_5.3.0-1_s390x.deb ...
148s Unpacking python3-lxml:s390x (5.3.0-1) ...
148s Selecting previously unselected package python3-citeproc.
148s Preparing to unpack .../143-python3-citeproc_0.6.0-3_all.deb ...
148s Unpacking python3-citeproc (0.6.0-3) ...
148s Selecting previously unselected package python3-contourpy.
148s Preparing to unpack .../144-python3-contourpy_1.3.0-2_s390x.deb ...
148s Unpacking python3-contourpy (1.3.0-2) ...
148s Selecting previously unselected package python3-cycler.
148s Preparing to unpack .../145-python3-cycler_0.12.1-1_all.deb ...
148s Unpacking python3-cycler (0.12.1-1) ...
148s Selecting previously unselected package python3-six.
148s Preparing to unpack .../146-python3-six_1.16.0-7_all.deb ...
148s Unpacking python3-six (1.16.0-7) ...
148s Selecting previously unselected package python3-dateutil.
148s Preparing to unpack .../147-python3-dateutil_2.9.0-2_all.deb ...
148s Unpacking python3-dateutil (2.9.0-2) ...
148s Selecting previously unselected package python3-decorator.
148s Preparing to unpack .../148-python3-decorator_5.1.1-5_all.deb ...
148s Unpacking python3-decorator (5.1.1-5) ...
148s Selecting previously unselected package python3-defusedxml.
148s Preparing to unpack .../149-python3-defusedxml_0.7.1-2_all.deb ...
148s Unpacking python3-defusedxml (0.7.1-2) ...
148s Selecting previously unselected package python3-roman.
148s Preparing to unpack .../150-python3-roman_4.2-1_all.deb ...
148s Unpacking python3-roman (4.2-1) ...
148s Selecting previously unselected package python3-docutils.
148s Preparing to unpack .../151-python3-docutils_0.21.2+dfsg-2_all.deb ...
148s Unpacking python3-docutils (0.21.2+dfsg-2) ...
148s Selecting previously unselected package python3-looseversion.
148s Preparing to unpack .../152-python3-looseversion_1.3.0-3_all.deb ...
148s Unpacking python3-looseversion (1.3.0-3) ...
148s Selecting previously unselected package python3-duecredit.
148s Preparing to unpack .../153-python3-duecredit_0.10.2-2_all.deb ...
148s Unpacking python3-duecredit (0.10.2-2) ...
148s Selecting previously unselected package python3-monotonic.
148s Preparing to unpack .../154-python3-monotonic_1.6-2_all.deb ...
148s Unpacking python3-monotonic (1.6-2) ...
148s Selecting previously unselected package python3-fasteners.
148s Preparing to unpack .../155-python3-fasteners_0.18-2_all.deb ...
148s Unpacking python3-fasteners (0.18-2) ...
148s Selecting previously unselected package python3-scipy.
148s Preparing to unpack .../156-python3-scipy_1.13.1-5_s390x.deb ...
148s Unpacking python3-scipy (1.13.1-5) ...
149s Selecting previously unselected package python3-ufolib2.
149s Preparing to unpack .../157-python3-ufolib2_0.16.1+dfsg1-1_all.deb ...
149s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ...
149s Selecting previously unselected package python3-mpmath.
149s Preparing to unpack .../158-python3-mpmath_1.3.0-1_all.deb ...
149s Unpacking python3-mpmath (1.3.0-1) ...
149s Selecting previously unselected package python3-sympy.
149s Preparing to unpack .../159-python3-sympy_1.13.3-1_all.deb ...
149s Unpacking python3-sympy (1.13.3-1) ...
149s Selecting previously unselected package python3-tz.
149s Preparing to unpack .../160-python3-tz_2024.1-2_all.deb ...
149s Unpacking python3-tz (2024.1-2) ...
149s Selecting previously unselected package python3-fs.
149s Preparing to unpack .../161-python3-fs_2.4.16-4_all.deb ...
149s Unpacking python3-fs (2.4.16-4) ...
149s Selecting previously unselected package python3-lz4.
149s Preparing to unpack .../162-python3-lz4_4.0.2+dfsg-1build4_s390x.deb ...
149s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ...
149s Selecting previously unselected package python3-unicodedata2.
149s Preparing to unpack .../163-python3-unicodedata2_15.1.0+ds-1build1_s390x.deb ...
149s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ...
149s Selecting previously unselected package unicode-data.
149s Preparing to unpack .../164-unicode-data_15.1.0-1_all.deb ...
149s Unpacking unicode-data (15.1.0-1) ...
149s Selecting previously unselected package python3-fonttools.
149s Preparing to unpack .../165-python3-fonttools_4.46.0-1build2_s390x.deb ...
149s Unpacking python3-fonttools (4.46.0-1build2) ...
149s Selecting previously unselected package sphinx-rtd-theme-common.
149s Preparing to unpack .../166-sphinx-rtd-theme-common_3.0.1+dfsg-1_all.deb ...
149s Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ...
149s Selecting previously unselected package python3-mrcfile.
149s Preparing to unpack .../167-python3-mrcfile_1.5.3-3_all.deb ...
149s Unpacking python3-mrcfile (1.5.3-3) ...
149s Selecting previously unselected package python3-griddataformats.
149s Preparing to unpack .../168-python3-griddataformats_1.0.2-2_all.deb ...
149s Unpacking python3-griddataformats (1.0.2-2) ...
149s Selecting previously unselected package python3-h5py-serial.
149s Preparing to unpack .../169-python3-h5py-serial_3.11.0-5ubuntu1_s390x.deb ...
149s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ...
149s Selecting previously unselected package python3-h5py.
149s Preparing to unpack .../170-python3-h5py_3.11.0-5ubuntu1_all.deb ...
149s Unpacking python3-h5py (3.11.0-5ubuntu1) ...
149s Selecting previously unselected package python3-sortedcontainers.
149s Preparing to unpack .../171-python3-sortedcontainers_2.4.0-2_all.deb ...
149s Unpacking python3-sortedcontainers (2.4.0-2) ...
149s Selecting previously unselected package python3-hypothesis.
149s Preparing to unpack .../172-python3-hypothesis_6.116.0-1_all.deb ...
149s Unpacking python3-hypothesis (6.116.0-1) ...
149s Selecting previously unselected package python3-imagesize.
149s Preparing to unpack .../173-python3-imagesize_1.4.1-1_all.deb ...
149s Unpacking python3-imagesize (1.4.1-1) ...
149s Selecting previously unselected package python3-iniconfig.
149s Preparing to unpack .../174-python3-iniconfig_1.1.1-2_all.deb ...
149s Unpacking python3-iniconfig (1.1.1-2) ...
149s Selecting previously unselected package python3-joblib.
149s Preparing to unpack .../175-python3-joblib_1.3.2-5_all.deb ...
149s Unpacking python3-joblib (1.3.2-5) ...
149s Selecting previously unselected package python3-kiwisolver.
149s Preparing to unpack .../176-python3-kiwisolver_1.4.7-2_s390x.deb ...
149s Unpacking python3-kiwisolver (1.4.7-2) ...
149s Selecting previously unselected package python3-latexcodec.
149s Preparing to unpack .../177-python3-latexcodec_3.0.0-1_all.deb ...
149s Unpacking python3-latexcodec (3.0.0-1) ...
149s Selecting previously unselected package python3-matplotlib.
149s Preparing to unpack .../178-python3-matplotlib_3.8.3-3_s390x.deb ...
149s Unpacking python3-matplotlib (3.8.3-3) ...
150s Selecting previously unselected package python3-mda-xdrlib.
150s Preparing to unpack .../179-python3-mda-xdrlib_0.2.0-3_all.deb ...
150s Unpacking python3-mda-xdrlib (0.2.0-3) ...
150s Selecting previously unselected package python3-msgpack.
150s Preparing to unpack .../180-python3-msgpack_1.0.3-3build2_s390x.deb ...
150s Unpacking python3-msgpack (1.0.3-3build2) ...
150s Selecting previously unselected package python3-mmtf.
150s Preparing to unpack .../181-python3-mmtf_1.1.3-1_all.deb ...
150s Unpacking python3-mmtf (1.1.3-1) ...
150s Selecting previously unselected package python3-threadpoolctl.
150s Preparing to unpack .../182-python3-threadpoolctl_3.1.0-1_all.deb ...
150s Unpacking python3-threadpoolctl (3.1.0-1) ...
150s Selecting previously unselected package python3-tqdm.
150s Preparing to unpack .../183-python3-tqdm_4.67.0-1_all.deb ...
150s Unpacking python3-tqdm (4.67.0-1) ...
150s Selecting previously unselected package python3-mdanalysis.
150s Preparing to unpack .../184-python3-mdanalysis_2.7.0-5_s390x.deb ...
150s Unpacking python3-mdanalysis (2.7.0-5) ...
150s Selecting previously unselected package sphinx-common.
150s Preparing to unpack .../185-sphinx-common_7.4.7-4_all.deb ...
150s Unpacking sphinx-common (7.4.7-4) ...
151s Selecting previously unselected package python3-alabaster.
151s Preparing to unpack .../186-python3-alabaster_0.7.16-0.1_all.deb ...
151s Unpacking python3-alabaster (0.7.16-0.1) ...
151s Selecting previously unselected package python3-snowballstemmer.
151s Preparing to unpack .../187-python3-snowballstemmer_2.2.0-4build1_all.deb ...
151s Unpacking python3-snowballstemmer (2.2.0-4build1) ...
151s Selecting previously unselected package python3-sphinx.
151s Preparing to unpack .../188-python3-sphinx_7.4.7-4_all.deb ...
151s Unpacking python3-sphinx (7.4.7-4) ...
151s Selecting previously unselected package python3-sphinxcontrib.jquery.
151s Preparing to unpack .../189-python3-sphinxcontrib.jquery_4.1-5_all.deb ...
151s Unpacking python3-sphinxcontrib.jquery (4.1-5) ...
151s Selecting previously unselected package python3-sphinx-rtd-theme.
151s Preparing to unpack .../190-python3-sphinx-rtd-theme_3.0.1+dfsg-1_all.deb ...
151s Unpacking python3-sphinx-rtd-theme (3.0.1+dfsg-1) ...
151s Selecting previously unselected package python3-msmb-theme.
151s Preparing to unpack .../191-python3-msmb-theme_1.2.0-4_all.deb ...
151s Unpacking python3-msmb-theme (1.2.0-4) ...
151s Selecting previously unselected package python3-netcdf4.
151s Preparing to unpack .../192-python3-netcdf4_1.7.2-1_s390x.deb ...
151s Unpacking python3-netcdf4 (1.7.2-1) ...
151s Selecting previously unselected package python3-networkx.
151s Preparing to unpack .../193-python3-networkx_3.2.1-4ubuntu1_all.deb ...
151s Unpacking python3-networkx (3.2.1-4ubuntu1) ...
151s Selecting previously unselected package python3-pandas-lib:s390x.
151s Preparing to unpack .../194-python3-pandas-lib_2.2.3+dfsg-5_s390x.deb ...
151s Unpacking python3-pandas-lib:s390x (2.2.3+dfsg-5) ...
151s Selecting previously unselected package python3-pandas.
151s Preparing to unpack .../195-python3-pandas_2.2.3+dfsg-5_all.deb ...
151s Unpacking python3-pandas (2.2.3+dfsg-5) ...
151s Selecting previously unselected package python3-pluggy.
151s Preparing to unpack .../196-python3-pluggy_1.5.0-1_all.deb ...
151s Unpacking python3-pluggy (1.5.0-1) ...
151s Selecting previously unselected package python3-pybtex.
151s Preparing to unpack .../197-python3-pybtex_0.24.0-4_all.deb ...
151s Unpacking python3-pybtex (0.24.0-4) ...
151s Selecting previously unselected package python3-pybtex-docutils.
151s Preparing to unpack .../198-python3-pybtex-docutils_1.0.2-1_all.deb ...
151s Unpacking python3-pybtex-docutils (1.0.2-1) ...
151s Selecting previously unselected package python3-pytest.
151s Preparing to unpack .../199-python3-pytest_8.3.3-1_all.deb ...
151s Unpacking python3-pytest (8.3.3-1) ...
151s Selecting previously unselected package python3-seaborn.
151s Preparing to unpack .../200-python3-seaborn_0.13.2-4_all.deb ...
151s Unpacking python3-seaborn (0.13.2-4) ...
151s Selecting previously unselected package python3-sklearn-lib:s390x.
151s Preparing to unpack .../201-python3-sklearn-lib_1.4.2+dfsg-6_s390x.deb ...
151s Unpacking python3-sklearn-lib:s390x (1.4.2+dfsg-6) ...
151s Selecting previously unselected package python3-sklearn.
151s Preparing to unpack .../202-python3-sklearn_1.4.2+dfsg-6_all.deb ...
151s Unpacking python3-sklearn (1.4.2+dfsg-6) ...
151s Selecting previously unselected package python3-sphinx-sitemap.
151s Preparing to unpack .../203-python3-sphinx-sitemap_2.6.0-1_all.deb ...
151s Unpacking python3-sphinx-sitemap (2.6.0-1) ...
151s Selecting previously unselected package python3-sphinxcontrib.bibtex.
151s Preparing to unpack .../204-python3-sphinxcontrib.bibtex_2.6.2-1_all.deb ...
151s Unpacking python3-sphinxcontrib.bibtex (2.6.2-1) ...
151s Selecting previously unselected package autopkgtest-satdep.
151s Preparing to unpack .../205-1-autopkgtest-satdep.deb ...
151s Unpacking autopkgtest-satdep (0) ...
151s Setting up dh-python (6.20241024) ...
151s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
151s Setting up liblcms2-2:s390x (2.16-2) ...
151s Setting up python3-iniconfig (1.1.1-2) ...
151s Setting up libpixman-1-0:s390x (0.44.0-3) ...
151s Setting up libsharpyuv0:s390x (1.4.0-0.1) ...
151s Setting up fonts-lato (2.015-1) ...
151s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
151s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
151s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
151s Setting up python3-joblib (1.3.2-5) ...
152s Setting up python3-lz4 (4.0.2+dfsg-1build4) ...
152s Setting up libxcb-render0:s390x (1.17.0-2) ...
152s Setting up python3-defusedxml (0.7.1-2) ...
152s Setting up libarchive-zip-perl (1.68-1) ...
152s Setting up python3-alabaster (0.7.16-0.1) ...
152s Setting up python3-unicodedata2 (15.1.0+ds-1build1) ...
152s Setting up fonts-lyx (2.4.2.1-1) ...
152s Setting up libdebhelper-perl (13.20ubuntu1) ...
152s Setting up python3-tqdm (4.67.0-1) ...
152s Setting up python3-threadpoolctl (3.1.0-1) ...
152s Setting up x11-common (1:7.7+23ubuntu3) ...
153s Setting up libdeflate0:s390x (1.22-1) ...
153s Setting up m4 (1.4.19-4build1) ...
153s Setting up python3-latexcodec (3.0.0-1) ...
153s Setting up libqhull-r8.0:s390x (2020.2-6build1) ...
153s Setting up libxcb-shm0:s390x (1.17.0-2) ...
153s Setting up python3-sortedcontainers (2.4.0-2) ...
153s Setting up libgomp1:s390x (14.2.0-8ubuntu1) ...
153s Setting up python3-networkx (3.2.1-4ubuntu1) ...
156s Setting up python3-wheel (0.44.0-1) ...
156s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
156s Setting up python3-mda-xdrlib (0.2.0-3) ...
156s Setting up libaec0:s390x (1.1.3-1) ...
156s Setting up python3-tz (2024.1-2) ...
156s Setting up python3-monotonic (1.6-2) ...
156s Setting up unicode-data (15.1.0-1) ...
156s Setting up python3-six (1.16.0-7) ...
156s Setting up libpython3.13-minimal:s390x (3.13.0-2) ...
156s Setting up python3-roman (4.2-1) ...
157s Setting up python3-decorator (5.1.1-5) ...
157s Setting up libfontenc1:s390x (1:1.1.8-1build1) ...
157s Setting up autotools-dev (20220109.1) ...
157s Setting up libblas3:s390x (3.12.0-3build2) ...
157s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
157s Setting up python3-packaging (24.1-1) ...
157s Setting up libexpat1-dev:s390x (2.6.2-2) ...
157s Setting up python3-pyproject-hooks (1.2.0-1) ...
157s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
157s Setting up python3-snowballstemmer (2.2.0-4build1) ...
157s Setting up python3-brotli (1.1.0-2build2) ...
157s Setting up liblzf1:s390x (3.6-4) ...
157s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ...
157s Setting up python3-cycler (0.12.1-1) ...
157s Setting up libimagequant0:s390x (2.18.0-1build1) ...
157s Setting up fonts-dejavu-mono (2.37-8) ...
157s Setting up python3-kiwisolver (1.4.7-2) ...
158s Setting up libmpc3:s390x (1.3.1-1build2) ...
158s Setting up cython3 (3.0.11+dfsg-1ubuntu1) ...
159s Setting up libtcl8.6:s390x (8.6.15+dfsg-2) ...
159s Setting up autopoint (0.22.5-2) ...
159s Setting up fonts-dejavu-core (2.37-8) ...
159s Setting up python3-fasteners (0.18-2) ...
159s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ...
159s Setting up python3-toml (0.10.2-1) ...
159s Setting up python3-installer (0.7.0+dfsg1-3) ...
159s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ...
159s Setting up autoconf (2.72-3) ...
159s Setting up python3-pluggy (1.5.0-1) ...
160s Setting up libwebp7:s390x (1.4.0-0.1) ...
160s Setting up python3-pybtex (0.24.0-4) ...
160s Setting up libubsan1:s390x (14.2.0-8ubuntu1) ...
160s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
160s Setting up dwz (0.15-1build6) ...
160s Setting up python3-looseversion (1.3.0-3) ...
160s Setting up libasan8:s390x (14.2.0-8ubuntu1) ...
160s Setting up libjson-perl (4.10000-1) ...
160s Setting up libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ...
160s Setting up debugedit (1:5.1-1) ...
160s Setting up libopenjp2-7:s390x (2.5.0-2ubuntu1) ...
160s Setting up python3.13-minimal (3.13.0-2) ...
161s Setting up libharfbuzz0b:s390x (10.0.1-1) ...
161s Setting up python3-dateutil (2.9.0-2) ...
161s Setting up sgml-base (1.31) ...
161s Setting up python3-msgpack (1.0.3-3build2) ...
161s Setting up libxss1:s390x (1:1.2.3-1build3) ...
161s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
161s Setting up python3-mpmath (1.3.0-1) ...
162s Setting up libisl23:s390x (0.27-1) ...
162s Setting up python3-build (1.2.2-1) ...
162s Setting up python-matplotlib-data (3.8.3-3) ...
162s Setting up libwebpmux3:s390x (1.4.0-0.1) ...
162s Setting up python3-appdirs (1.4.4-4) ...
162s Setting up libpython3.13-stdlib:s390x (3.13.0-2) ...
162s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
162s Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ...
162s Setting up libcc1-0:s390x (14.2.0-8ubuntu1) ...
162s Setting up libsz2:s390x (1.1.3-1) ...
162s Setting up libitm1:s390x (14.2.0-8ubuntu1) ...
162s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
162s Setting up python3-imagesize (1.4.1-1) ...
163s Setting up libpython3.13:s390x (3.13.0-2) ...
163s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
163s Setting up automake (1:1.16.5-1.3ubuntu1) ...
163s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
163s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ...
163s Setting up python3-sympy (1.13.3-1) ...
179s Setting up liblapack3:s390x (3.12.0-3build2) ...
179s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
179s Setting up gettext (0.22.5-2) ...
179s Setting up python3.13 (3.13.0-2) ...
180s Setting up pybuild-plugin-pyproject (6.20241024) ...
180s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
180s Setting up python3-pytest (8.3.3-1) ...
180s Setting up libwebpdemux2:s390x (1.4.0-0.1) ...
180s Setting up python3-hypothesis (6.116.0-1) ...
181s Setting up python3-all (3.12.7-1) ...
181s Setting up libpython3.12-dev:s390x (3.12.7-3) ...
181s Setting up python3-freetype (2.5.1-1) ...
181s Setting up xfonts-utils (1:7.7+7) ...
181s Setting up intltool-debian (0.35.0+20060710.6) ...
181s Setting up python3-fs (2.4.16-4) ...
182s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
182s Setting up libraqm0:s390x (0.10.1-1build1) ...
182s Setting up libpython3.13-dev:s390x (3.13.0-2) ...
182s Setting up python3.12-dev (3.12.7-3) ...
182s Setting up python3-numpy (1:1.26.4+ds-11build1) ...
186s Setting up libjs-sphinxdoc (7.4.7-4) ...
186s Setting up cpp-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
186s Setting up cpp-14 (14.2.0-8ubuntu1) ...
186s Setting up dh-strip-nondeterminism (1.14.0-1) ...
186s Setting up python3-lxml:s390x (5.3.0-1) ...
186s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
186s Setting up xml-core (0.19) ...
186s Setting up python3-contourpy (1.3.0-2) ...
186s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ...
186s Setting up libgcc-14-dev:s390x (14.2.0-8ubuntu1) ...
186s Setting up libhdf5-103-1t64:s390x (1.10.10+repack-4ubuntu3) ...
186s Setting up libstdc++-14-dev:s390x (14.2.0-8ubuntu1) ...
186s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ...
186s Setting up python3-mrcfile (1.5.3-3) ...
187s Setting up libhdf5-hl-100t64:s390x (1.10.10+repack-4ubuntu3) ...
187s Setting up libnetcdf19t64:s390x (1:4.9.2-6ubuntu1) ...
187s Setting up libxft2:s390x (2.3.6-1build1) ...
187s Setting up python3-scipy (1.13.1-5) ...
194s Setting up libpython3-dev:s390x (3.12.7-1) ...
194s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
194s Setting up python3-citeproc (0.6.0-3) ...
194s Setting up python3.13-dev (3.13.0-2) ...
194s Setting up po-debconf (1.0.21+nmu1) ...
194s Setting up libtk8.6:s390x (8.6.15-1) ...
194s Setting up python3-pandas-lib:s390x (2.2.3+dfsg-5) ...
194s Setting up python3.12-tk (3.12.7-3) ...
195s Setting up python3-sklearn-lib:s390x (1.4.2+dfsg-6) ...
195s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ...
195s Setting up python3-mmtf (1.1.3-1) ...
195s Setting up fonts-urw-base35 (20200910-8) ...
195s Setting up libcairo2:s390x (1.18.2-2) ...
195s Setting up python3.13-tk (3.13.0-2) ...
195s Setting up python-mdanalysis-doc (2.7.0-5) ...
195s Setting up python3-pil:s390x (10.4.0-1ubuntu1) ...
196s Setting up gcc-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
196s Setting up python3-griddataformats (1.0.2-2) ...
196s Setting up python3-pandas (2.2.3+dfsg-5) ...
208s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
208s Setting up libpython3-all-dev:s390x (3.12.7-1) ...
208s Setting up sphinx-common (7.4.7-4) ...
208s Setting up python3-dev (3.12.7-1) ...
208s Setting up python3-h5py (3.11.0-5ubuntu1) ...
208s Setting up g++-14-s390x-linux-gnu (14.2.0-8ubuntu1) ...
208s Setting up python3-sklearn (1.4.2+dfsg-6) ...
213s Setting up python3-cftime (1.6.4-1) ...
213s Setting up cpp (4:14.1.0-2ubuntu1) ...
213s Setting up python3-netcdf4 (1.7.2-1) ...
213s Setting up python3-all-dev (3.12.7-1) ...
213s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ...
213s Setting up python3-cairo (1.26.1-2) ...
213s Setting up python3-duecredit (0.10.2-2) ...
213s Setting up blt (2.5.3+dfsg-7build1) ...
213s Setting up python3-tk:s390x (3.12.7-1) ...
213s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
213s Setting up gcc-14 (14.2.0-8ubuntu1) ...
213s Setting up python3-pil.imagetk:s390x (10.4.0-1ubuntu1) ...
213s Setting up python3-rlpycairo (0.3.0-3) ...
213s Setting up python3-reportlab (4.2.5-1) ...
215s Setting up g++-14 (14.2.0-8ubuntu1) ...
215s Setting up libtool (2.4.7-7build1) ...
215s Setting up gcc (4:14.1.0-2ubuntu1) ...
215s Setting up dh-autoreconf (20) ...
215s Setting up g++ (4:14.1.0-2ubuntu1) ...
215s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
215s Setting up build-essential (12.10ubuntu1) ...
215s Setting up debhelper (13.20ubuntu1) ...
215s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ...
215s Setting up python3-fonttools (4.46.0-1build2) ...
217s Setting up python3-matplotlib (3.8.3-3) ...
220s Setting up python3-mdanalysis (2.7.0-5) ...
221s Setting up python3-seaborn (0.13.2-4) ...
221s Processing triggers for systemd (256.5-2ubuntu4) ...
221s Processing triggers for man-db (2.12.1-3) ...
222s Processing triggers for install-info (7.1.1-1) ...
222s Processing triggers for libc-bin (2.40-1ubuntu3) ...
222s Processing triggers for sgml-base (1.31) ...
222s Setting up docutils-common (0.21.2+dfsg-2) ...
222s Setting up w3c-sgml-lib (1.3-3) ...
243s Setting up python3-biopython (1.84+dfsg-4) ...
245s Processing triggers for sgml-base (1.31) ...
245s Setting up python3-docutils (0.21.2+dfsg-2) ...
246s Setting up python3-pybtex-docutils (1.0.2-1) ...
246s Setting up python3-sphinx (7.4.7-4) ...
247s Setting up python3-sphinxcontrib.bibtex (2.6.2-1) ...
248s Setting up python3-sphinx-sitemap (2.6.0-1) ...
248s Setting up python3-sphinxcontrib.jquery (4.1-5) ...
248s Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ...
248s Setting up python3-msmb-theme (1.2.0-4) ...
248s Setting up autopkgtest-satdep (0) ...
252s (Reading database ... 82215 files and directories currently installed.)
252s Removing autopkgtest-satdep (0) ...
253s autopkgtest [11:56:12]: test test-mdanalysis: [-----------------------
253s skipping tests with SKIP_TEST_LIST=test_start_stop_step test_count_by_time test_rmsd test_mass_weighted test_custom_weighted test_ref_mobile_mass_mismapped test_time test_dt test_total_time test_iter test_last_frame test_frame_jump test_next_gives_second_frame test_set_time test_write_istart test_write_trajectory_atomgroup test_write_trajectory_universe test_Timestep_time test_rename_aux test_namdbin ref_reader25 ref_reader_extra_args25
254s ============================= test session starts ==============================
254s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13
254s cachedir: .pytest_cache
254s hypothesis profile 'default' -> database=DirectoryBasedExampleDatabase(PosixPath('/tmp/autopkgtest.oSsbzq/build.b5q/src/.hypothesis/examples'))
254s rootdir: /tmp/autopkgtest.oSsbzq/build.b5q/src
254s plugins: typeguard-4.4.1, hypothesis-6.116.0
257s collecting ... collected 0 items / 163 errors
257s 
257s ==================================== ERRORS ====================================
257s ______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_align.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_align.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/analysis/test_atomicdistances.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_atomicdistances.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_base.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_base.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_bat.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_bat.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_contacts.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_contacts.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_data.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_data.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_density.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_density.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_dielectric.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_dielectric.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ___ ERROR collecting testsuite/MDAnalysisTests/analysis/test_diffusionmap.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_diffusionmap.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_dihedrals.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_dihedrals.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_distances.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_distances.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_encore.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_encore.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_gnm.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_gnm.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/analysis/test_helix_analysis.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_helix_analysis.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_hole2.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_hole2.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py _
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py _
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py _
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_leaflet.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_leaflet.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/analysis/test_lineardensity.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_lineardensity.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_msd.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_msd.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ___ ERROR collecting testsuite/MDAnalysisTests/analysis/test_nucleicacids.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_nucleicacids.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_nuclinfo.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_nuclinfo.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_pca.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_pca.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/analysis/test_persistencelength.py _
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_persistencelength.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_psa.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_psa.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_rdf.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_rdf.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_rdf_s.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_rdf_s.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/analysis/test_rms.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_rms.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/analysis/test_waterdynamics.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_waterdynamics.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/analysis/test_wbridge.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/analysis/test_wbridge.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/auxiliary/test_core.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/auxiliary/test_core.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/auxiliary/test_edr.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/auxiliary/test_edr.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/auxiliary/test_xvg.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/auxiliary/test_xvg.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/converters/test_base.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_base.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/converters/test_openmm.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_openmm.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/converters/test_openmm_parser.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_openmm_parser.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/converters/test_parmed.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_parmed.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/converters/test_parmed_parser.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_parmed_parser.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/converters/test_rdkit.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_rdkit.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/converters/test_rdkit_parser.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/converters/test_rdkit_parser.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_chainreader.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_chainreader.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ___ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_chemfiles.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_chemfiles.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_copying.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_copying.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_crd.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_crd.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_dcd.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_dcd.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_dlpoly.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_dlpoly.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_dms.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_dms.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_fhiaims.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_fhiaims.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_gms.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_gms.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_gro.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_gro.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_gsd.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_gsd.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_h5md.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_h5md.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_lammps.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_lammps.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_memory.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_memory.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_mmtf.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_mmtf.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_mol2.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_mol2.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_namdbin.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_namdbin.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_netcdf.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_netcdf.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_null.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_null.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_pdb.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_pdb.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_pdbqt.py _____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_pdbqt.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_pqr.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_pqr.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_reader_api.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_reader_api.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_timestep_api.py __
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_timestep_api.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_tng.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_tng.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_trc.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_trc.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_trj.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_trj.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_trz.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_trz.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_txyz.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_txyz.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_windows.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_windows.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_writer_api.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_writer_api.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_writer_registration.py _
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_writer_registration.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_xdr.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_xdr.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/coordinates/test_xyz.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/coordinates/test_xyz.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/core/test_accessors.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_accessors.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/core/test_accumulate.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_accumulate.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _________ ERROR collecting testsuite/MDAnalysisTests/core/test_atom.py _________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_atom.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/core/test_atomgroup.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_atomgroup.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ____ ERROR collecting testsuite/MDAnalysisTests/core/test_atomselections.py ____
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_atomselections.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_copying.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_copying.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ______ ERROR collecting testsuite/MDAnalysisTests/core/test_fragments.py _______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_fragments.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s __ ERROR collecting testsuite/MDAnalysisTests/core/test_group_traj_access.py ___
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_group_traj_access.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s ________ ERROR collecting testsuite/MDAnalysisTests/core/test_groups.py ________
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_groups.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
257s testsuite/MDAnalysisTests/util.py:41: in <module>
257s     from numpy.testing import assert_warns
257s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
257s     raise ImportError(msg) from e
257s E   ImportError: Error importing numpy: you should not try to import numpy from
257s E           its source directory; please exit the numpy source tree, and relaunch
257s E           your python interpreter from there.
257s _____ ERROR collecting testsuite/MDAnalysisTests/core/test_index_dtype.py ______
257s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_index_dtype.py'.
257s Hint: make sure your test modules/packages have valid Python names.
257s Traceback:
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
257s     from . import multiarray
257s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
257s     from . import overrides
257s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
257s     from numpy.core._multiarray_umath import (
257s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
257s 
257s During handling of the above exception, another exception occurred:
257s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
257s     from numpy.__config__ import show as show_config
257s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
257s     from numpy.core._multiarray_umath import (
257s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
257s     raise ImportError(msg)
257s E   ImportError: 
257s E   
257s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
257s E   
257s E   Importing the numpy C-extensions failed. This error can happen for
257s E   many reasons, often due to issues with your setup or how NumPy was
257s E   installed.
257s E   
257s E   We have compiled some common reasons and troubleshooting tips at:
257s E   
257s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
257s E   
257s E   Please note and check the following:
257s E   
257s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
257s E     * The NumPy version is: "1.26.4"
257s E   
257s E   and make sure that they are the versions you expect.
257s E   Please carefully study the documentation linked above for further help.
257s E   
257s E   Original error was: No module named 'numpy.core._multiarray_umath'
257s 
257s The above exception was the direct cause of the following exception:
257s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
257s     return _bootstrap._gcd_import(name[level:], package, level)
257s testsuite/MDAnalysisTests/__init__.py:125: in <module>
257s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_requires.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_requires.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_residue.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_residue.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/core/test_residuegroup.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_residuegroup.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_segment.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_segment.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/core/test_segmentgroup.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_segmentgroup.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_topology.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_topology.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____ ERROR collecting testsuite/MDAnalysisTests/core/test_topologyattrs.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_topologyattrs.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ___ ERROR collecting testsuite/MDAnalysisTests/core/test_topologyobjects.py ____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_topologyobjects.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/core/test_universe.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_universe.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/core/test_unwrap.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_unwrap.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s __ ERROR collecting testsuite/MDAnalysisTests/core/test_updating_atomgroup.py __
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_updating_atomgroup.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _________ ERROR collecting testsuite/MDAnalysisTests/core/test_wrap.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/core/test_wrap.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/formats/test_libdcd.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/formats/test_libdcd.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/formats/test_libmdaxdr.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/formats/test_libmdaxdr.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/import/test_import.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/import/test_import.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/lib/test_augment.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_augment.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _________ ERROR collecting testsuite/MDAnalysisTests/lib/test_cutil.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_cutil.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/lib/test_distances.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_distances.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s __________ ERROR collecting testsuite/MDAnalysisTests/lib/test_log.py __________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_log.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____ ERROR collecting testsuite/MDAnalysisTests/lib/test_neighborsearch.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_neighborsearch.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/lib/test_nsgrid.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_nsgrid.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/lib/test_pkdtree.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_pkdtree.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/lib/test_qcprot.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_qcprot.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _________ ERROR collecting testsuite/MDAnalysisTests/lib/test_util.py __________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/lib/test_util.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py:25: in <module>
258s     import numpy as np
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py:25: in <module>
258s     from numpy.testing import assert_almost_equal
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____________ ERROR collecting testsuite/MDAnalysisTests/test_api.py ____________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/test_api.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/topology/test_altloc.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_altloc.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_crd.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_crd.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/topology/test_dlpoly.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_dlpoly.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_dms.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_dms.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/topology/test_fhiaims.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_fhiaims.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_gms.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_gms.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_gro.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_gro.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_gsd.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_gsd.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/topology/test_guessers.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_guessers.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/topology/test_hoomdxml.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_hoomdxml.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_itp.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_itp.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____ ERROR collecting testsuite/MDAnalysisTests/topology/test_lammpsdata.py ____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_lammpsdata.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/topology/test_minimal.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_minimal.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_mmtf.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_mmtf.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_mol2.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_mol2.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_pdb.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_pdb.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/topology/test_pdbqt.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_pdbqt.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_pqr.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_pqr.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_psf.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_psf.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_top.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_top.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s __ ERROR collecting testsuite/MDAnalysisTests/topology/test_topology_base.py ___
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_topology_base.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/topology/test_topology_str_types.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_topology_str_types.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____ ERROR collecting testsuite/MDAnalysisTests/topology/test_tprparser.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_tprparser.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_txyz.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_txyz.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_xpdb.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_xpdb.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/topology/test_xyz.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/topology/test_xyz.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ___ ERROR collecting testsuite/MDAnalysisTests/transformations/test_base.py ____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_base.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/transformations/test_boxdimensions.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_boxdimensions.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ____ ERROR collecting testsuite/MDAnalysisTests/transformations/test_fit.py ____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_fit.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s __ ERROR collecting testsuite/MDAnalysisTests/transformations/test_nojump.py ___
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_nojump.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/transformations/test_positionaveraging.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_positionaveraging.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s __ ERROR collecting testsuite/MDAnalysisTests/transformations/test_rotate.py ___
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_rotate.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/transformations/test_translate.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_translate.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ___ ERROR collecting testsuite/MDAnalysisTests/transformations/test_wrap.py ____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/transformations/test_wrap.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/utils/test_authors.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_authors.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/utils/test_datafiles.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_datafiles.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/utils/test_duecredit.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_duecredit.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/utils/test_failure.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_failure.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/utils/test_imports.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_imports.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _________ ERROR collecting testsuite/MDAnalysisTests/utils/test_log.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_log.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/utils/test_meta.py _________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_meta.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/utils/test_modelling.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_modelling.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/utils/test_persistence.py _____
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_persistence.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/utils/test_pickleio.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_pickleio.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _______ ERROR collecting testsuite/MDAnalysisTests/utils/test_qcprot.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_qcprot.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _____ ERROR collecting testsuite/MDAnalysisTests/utils/test_selections.py ______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_selections.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ______ ERROR collecting testsuite/MDAnalysisTests/utils/test_streamio.py _______
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_streamio.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ___ ERROR collecting testsuite/MDAnalysisTests/utils/test_transformations.py ___
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_transformations.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s ________ ERROR collecting testsuite/MDAnalysisTests/utils/test_units.py ________
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/utils/test_units.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s _ ERROR collecting testsuite/MDAnalysisTests/visualization/test_streamlines.py _
258s ImportError while importing test module '/tmp/autopkgtest.oSsbzq/build.b5q/src/testsuite/MDAnalysisTests/visualization/test_streamlines.py'.
258s Hint: make sure your test modules/packages have valid Python names.
258s Traceback:
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in <module>
258s     from . import multiarray
258s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in <module>
258s     from . import overrides
258s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in <module>
258s     from numpy.core._multiarray_umath import (
258s E   ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
258s 
258s During handling of the above exception, another exception occurred:
258s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in <module>
258s     from numpy.__config__ import show as show_config
258s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in <module>
258s     from numpy.core._multiarray_umath import (
258s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in <module>
258s     raise ImportError(msg)
258s E   ImportError: 
258s E   
258s E   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
258s E   
258s E   Importing the numpy C-extensions failed. This error can happen for
258s E   many reasons, often due to issues with your setup or how NumPy was
258s E   installed.
258s E   
258s E   We have compiled some common reasons and troubleshooting tips at:
258s E   
258s E       https://numpy.org/devdocs/user/troubleshooting-importerror.html
258s E   
258s E   Please note and check the following:
258s E   
258s E     * The Python version is: Python3.13 from "/usr/bin/python3.13"
258s E     * The NumPy version is: "1.26.4"
258s E   
258s E   and make sure that they are the versions you expect.
258s E   Please carefully study the documentation linked above for further help.
258s E   
258s E   Original error was: No module named 'numpy.core._multiarray_umath'
258s 
258s The above exception was the direct cause of the following exception:
258s /usr/lib/python3.13/importlib/__init__.py:88: in import_module
258s     return _bootstrap._gcd_import(name[level:], package, level)
258s testsuite/MDAnalysisTests/__init__.py:125: in <module>
258s     from MDAnalysisTests.util import (
258s testsuite/MDAnalysisTests/util.py:41: in <module>
258s     from numpy.testing import assert_warns
258s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in <module>
258s     raise ImportError(msg) from e
258s E   ImportError: Error importing numpy: you should not try to import numpy from
258s E           its source directory; please exit the numpy source tree, and relaunch
258s E           your python interpreter from there.
258s =========================== short test summary info ============================
258s ERROR testsuite/MDAnalysisTests/analysis/test_align.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_atomicdistances.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_base.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_bat.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_contacts.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_data.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_density.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_dielectric.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_diffusionmap.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_dihedrals.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_distances.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_encore.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_gnm.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_helix_analysis.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_hole2.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_leaflet.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_lineardensity.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_msd.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_nucleicacids.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_nuclinfo.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_pca.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_persistencelength.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_psa.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_rdf.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_rdf_s.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_rms.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_waterdynamics.py
258s ERROR testsuite/MDAnalysisTests/analysis/test_wbridge.py
258s ERROR testsuite/MDAnalysisTests/auxiliary/test_core.py
258s ERROR testsuite/MDAnalysisTests/auxiliary/test_edr.py
258s ERROR testsuite/MDAnalysisTests/auxiliary/test_xvg.py
258s ERROR testsuite/MDAnalysisTests/converters/test_base.py
258s ERROR testsuite/MDAnalysisTests/converters/test_openmm.py
258s ERROR testsuite/MDAnalysisTests/converters/test_openmm_parser.py
258s ERROR testsuite/MDAnalysisTests/converters/test_parmed.py
258s ERROR testsuite/MDAnalysisTests/converters/test_parmed_parser.py
258s ERROR testsuite/MDAnalysisTests/converters/test_rdkit.py
258s ERROR testsuite/MDAnalysisTests/converters/test_rdkit_parser.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_amber_inpcrd.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_chainreader.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_chemfiles.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_copying.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_crd.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_dcd.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_dlpoly.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_dms.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_fhiaims.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_gms.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_gro.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_gsd.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_h5md.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_lammps.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_memory.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_mmtf.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_mol2.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_namdbin.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_netcdf.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_null.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_pdb.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_pdbqt.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_pqr.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_reader_api.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_timestep_api.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_tng.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_trc.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_trj.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_trz.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_txyz.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_windows.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_writer_api.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_writer_registration.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_xdr.py
258s ERROR testsuite/MDAnalysisTests/coordinates/test_xyz.py
258s ERROR testsuite/MDAnalysisTests/core/test_accessors.py
258s ERROR testsuite/MDAnalysisTests/core/test_accumulate.py
258s ERROR testsuite/MDAnalysisTests/core/test_atom.py
258s ERROR testsuite/MDAnalysisTests/core/test_atomgroup.py
258s ERROR testsuite/MDAnalysisTests/core/test_atomselections.py
258s ERROR testsuite/MDAnalysisTests/core/test_copying.py
258s ERROR testsuite/MDAnalysisTests/core/test_fragments.py
258s ERROR testsuite/MDAnalysisTests/core/test_group_traj_access.py
258s ERROR testsuite/MDAnalysisTests/core/test_groups.py
258s ERROR testsuite/MDAnalysisTests/core/test_index_dtype.py
258s ERROR testsuite/MDAnalysisTests/core/test_requires.py
258s ERROR testsuite/MDAnalysisTests/core/test_residue.py
258s ERROR testsuite/MDAnalysisTests/core/test_residuegroup.py
258s ERROR testsuite/MDAnalysisTests/core/test_segment.py
258s ERROR testsuite/MDAnalysisTests/core/test_segmentgroup.py
258s ERROR testsuite/MDAnalysisTests/core/test_topology.py
258s ERROR testsuite/MDAnalysisTests/core/test_topologyattrs.py
258s ERROR testsuite/MDAnalysisTests/core/test_topologyobjects.py
258s ERROR testsuite/MDAnalysisTests/core/test_universe.py
258s ERROR testsuite/MDAnalysisTests/core/test_unwrap.py
258s ERROR testsuite/MDAnalysisTests/core/test_updating_atomgroup.py
258s ERROR testsuite/MDAnalysisTests/core/test_wrap.py
258s ERROR testsuite/MDAnalysisTests/formats/test_libdcd.py
258s ERROR testsuite/MDAnalysisTests/formats/test_libmdaxdr.py
258s ERROR testsuite/MDAnalysisTests/import/test_import.py
258s ERROR testsuite/MDAnalysisTests/lib/test_augment.py
258s ERROR testsuite/MDAnalysisTests/lib/test_cutil.py
258s ERROR testsuite/MDAnalysisTests/lib/test_distances.py
258s ERROR testsuite/MDAnalysisTests/lib/test_log.py
258s ERROR testsuite/MDAnalysisTests/lib/test_neighborsearch.py
258s ERROR testsuite/MDAnalysisTests/lib/test_nsgrid.py
258s ERROR testsuite/MDAnalysisTests/lib/test_pkdtree.py
258s ERROR testsuite/MDAnalysisTests/lib/test_qcprot.py
258s ERROR testsuite/MDAnalysisTests/lib/test_util.py
258s ERROR testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py
258s ERROR testsuite/MDAnalysisTests/parallelism/test_pickle_transformation.py
258s ERROR testsuite/MDAnalysisTests/test_api.py
258s ERROR testsuite/MDAnalysisTests/topology/test_altloc.py
258s ERROR testsuite/MDAnalysisTests/topology/test_crd.py
258s ERROR testsuite/MDAnalysisTests/topology/test_dlpoly.py
258s ERROR testsuite/MDAnalysisTests/topology/test_dms.py
258s ERROR testsuite/MDAnalysisTests/topology/test_fhiaims.py
258s ERROR testsuite/MDAnalysisTests/topology/test_gms.py
258s ERROR testsuite/MDAnalysisTests/topology/test_gro.py
258s ERROR testsuite/MDAnalysisTests/topology/test_gsd.py
258s ERROR testsuite/MDAnalysisTests/topology/test_guessers.py
258s ERROR testsuite/MDAnalysisTests/topology/test_hoomdxml.py
258s ERROR testsuite/MDAnalysisTests/topology/test_itp.py
258s ERROR testsuite/MDAnalysisTests/topology/test_lammpsdata.py
258s ERROR testsuite/MDAnalysisTests/topology/test_minimal.py
258s ERROR testsuite/MDAnalysisTests/topology/test_mmtf.py
258s ERROR testsuite/MDAnalysisTests/topology/test_mol2.py
258s ERROR testsuite/MDAnalysisTests/topology/test_pdb.py
258s ERROR testsuite/MDAnalysisTests/topology/test_pdbqt.py
258s ERROR testsuite/MDAnalysisTests/topology/test_pqr.py
258s ERROR testsuite/MDAnalysisTests/topology/test_psf.py
258s ERROR testsuite/MDAnalysisTests/topology/test_top.py
258s ERROR testsuite/MDAnalysisTests/topology/test_topology_base.py
258s ERROR testsuite/MDAnalysisTests/topology/test_topology_str_types.py
258s ERROR testsuite/MDAnalysisTests/topology/test_tprparser.py
258s ERROR testsuite/MDAnalysisTests/topology/test_txyz.py
258s ERROR testsuite/MDAnalysisTests/topology/test_xpdb.py
258s ERROR testsuite/MDAnalysisTests/topology/test_xyz.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_base.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_boxdimensions.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_fit.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_nojump.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_positionaveraging.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_rotate.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_translate.py
258s ERROR testsuite/MDAnalysisTests/transformations/test_wrap.py
258s ERROR testsuite/MDAnalysisTests/utils/test_authors.py
258s ERROR testsuite/MDAnalysisTests/utils/test_datafiles.py
258s ERROR testsuite/MDAnalysisTests/utils/test_duecredit.py
258s ERROR testsuite/MDAnalysisTests/utils/test_failure.py
258s ERROR testsuite/MDAnalysisTests/utils/test_imports.py
258s ERROR testsuite/MDAnalysisTests/utils/test_log.py
258s ERROR testsuite/MDAnalysisTests/utils/test_meta.py
258s ERROR testsuite/MDAnalysisTests/utils/test_modelling.py
258s ERROR testsuite/MDAnalysisTests/utils/test_persistence.py
258s ERROR testsuite/MDAnalysisTests/utils/test_pickleio.py
258s ERROR testsuite/MDAnalysisTests/utils/test_qcprot.py
258s ERROR testsuite/MDAnalysisTests/utils/test_selections.py
258s ERROR testsuite/MDAnalysisTests/utils/test_streamio.py
258s ERROR testsuite/MDAnalysisTests/utils/test_transformations.py
258s ERROR testsuite/MDAnalysisTests/utils/test_units.py
258s ERROR testsuite/MDAnalysisTests/visualization/test_streamlines.py
258s !!!!!!!!!!!!!!!!!! Interrupted: 163 errors during collection !!!!!!!!!!!!!!!!!!!
258s ============================= 163 errors in 3.54s ==============================
258s autopkgtest [11:56:17]: test test-mdanalysis: -----------------------]
259s test-mdanalysis      FAIL non-zero exit status 2
259s autopkgtest [11:56:18]: test test-mdanalysis:  - - - - - - - - - - results - - - - - - - - - -
260s autopkgtest [11:56:19]: @@@@@@@@@@@@@@@@@@@@ summary
260s test-mdanalysis      FAIL non-zero exit status 2
271s nova [W] Using flock in prodstack6-s390x
271s Creating nova instance adt-plucky-s390x-mdanalysis-20241113-115159-juju-7f2275-prod-proposed-migration-environment-15-8c1f2c22-846a-42b9-b0ad-02689db11426 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)...