0s autopkgtest [09:34:50]: starting date and time: 2024-12-03 09:34:50+0000 0s autopkgtest [09:34:50]: git checkout: be626eda Fix armhf LXD image generation for plucky 0s autopkgtest [09:34:50]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8nxiolsp/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:astropy --apt-upgrade imexam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=astropy/7.0.0-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-16.secgroup --name adt-plucky-s390x-imexam-20241203-093449-juju-7f2275-prod-proposed-migration-environment-2-18ecdafa-691d-4295-96b9-7d32ceba2baa --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 140s autopkgtest [09:37:10]: testbed dpkg architecture: s390x 140s autopkgtest [09:37:10]: testbed apt version: 2.9.14ubuntu1 141s autopkgtest [09:37:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 141s autopkgtest [09:37:11]: testbed release detected to be: None 142s autopkgtest [09:37:12]: updating testbed package index (apt update) 142s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 143s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 143s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 143s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 143s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 143s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 143s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [781 kB] 143s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [65.3 kB] 143s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [125 kB] 143s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [928 B] 143s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [627 kB] 143s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [7964 B] 143s Fetched 1705 kB in 1s (1425 kB/s) 144s Reading package lists... 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s Calculating upgrade... 146s The following packages will be upgraded: 146s gcc-14-base libatomic1 libgcc-s1 libstdc++6 146s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 146s Need to get 994 kB of archives. 146s After this operation, 1024 B of additional disk space will be used. 146s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libatomic1 s390x 14.2.0-9ubuntu1 [9424 B] 146s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-base s390x 14.2.0-9ubuntu1 [51.9 kB] 146s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++6 s390x 14.2.0-9ubuntu1 [897 kB] 146s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-s1 s390x 14.2.0-9ubuntu1 [35.9 kB] 147s Fetched 994 kB in 1s (1555 kB/s) 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55869 files and directories currently installed.) 148s Preparing to unpack .../libatomic1_14.2.0-9ubuntu1_s390x.deb ... 148s Unpacking libatomic1:s390x (14.2.0-9ubuntu1) over (14.2.0-8ubuntu1) ... 148s Preparing to unpack .../gcc-14-base_14.2.0-9ubuntu1_s390x.deb ... 148s Unpacking gcc-14-base:s390x (14.2.0-9ubuntu1) over (14.2.0-8ubuntu1) ... 148s Setting up gcc-14-base:s390x (14.2.0-9ubuntu1) ... 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55869 files and directories currently installed.) 148s Preparing to unpack .../libstdc++6_14.2.0-9ubuntu1_s390x.deb ... 149s Unpacking libstdc++6:s390x (14.2.0-9ubuntu1) over (14.2.0-8ubuntu1) ... 149s Setting up libstdc++6:s390x (14.2.0-9ubuntu1) ... 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55869 files and directories currently installed.) 149s Preparing to unpack .../libgcc-s1_14.2.0-9ubuntu1_s390x.deb ... 149s Unpacking libgcc-s1:s390x (14.2.0-9ubuntu1) over (14.2.0-8ubuntu1) ... 149s Setting up libgcc-s1:s390x (14.2.0-9ubuntu1) ... 149s Setting up libatomic1:s390x (14.2.0-9ubuntu1) ... 149s Processing triggers for libc-bin (2.40-1ubuntu3) ... 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 150s autopkgtest [09:37:20]: upgrading testbed (apt dist-upgrade and autopurge) 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 151s Starting 2 pkgProblemResolver with broken count: 0 151s Done 151s Entering ResolveByKeep 152s 152s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 152s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s Starting pkgProblemResolver with broken count: 0 153s Starting 2 pkgProblemResolver with broken count: 0 153s Done 153s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 155s autopkgtest [09:37:25]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 156s autopkgtest [09:37:26]: @@@@@@@@@@@@@@@@@@@@ apt-source imexam 160s Get:1 http://ftpmaster.internal/ubuntu plucky/universe imexam 0.9.1-6 (dsc) [2361 B] 160s Get:2 http://ftpmaster.internal/ubuntu plucky/universe imexam 0.9.1-6 (tar) [21.4 MB] 160s Get:3 http://ftpmaster.internal/ubuntu plucky/universe imexam 0.9.1-6 (diff) [7756 B] 160s gpgv: Signature made Tue Nov 28 09:16:30 2023 UTC 160s gpgv: using RSA key BAFC6C85F7CB143FEEB6FB157115AFD07710DCF7 160s gpgv: Can't check signature: No public key 160s dpkg-source: warning: cannot verify inline signature for ./imexam_0.9.1-6.dsc: no acceptable signature found 160s autopkgtest [09:37:30]: testing package imexam version 0.9.1-6 161s autopkgtest [09:37:31]: build not needed 174s autopkgtest [09:37:44]: test command1: preparing testbed 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Starting pkgProblemResolver with broken count: 0 175s Starting 2 pkgProblemResolver with broken count: 0 175s Done 175s The following NEW packages will be installed: 175s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx ipython3 175s libblas3 libdeflate0 liberfa1 libfontconfig1 libfreetype6 libgfortran5 175s libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 175s libjpeg8 libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen 175s libjs-jquery-metadata libjs-jquery-tablesorter 175s libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc 175s libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libopenjp2-7 175s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0 175s libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwcs8 libwebp7 libwebpdemux2 175s libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 python-matplotlib-data 175s python3-appdirs python3-astropy python3-astropy-iers-data python3-asttokens 175s python3-brotli python3-contourpy python3-coverage python3-cycler 175s python3-dateutil python3-decorator python3-erfa python3-executing 175s python3-fonttools python3-fs python3-hypothesis python3-imexam 175s python3-iniconfig python3-ipython python3-jedi python3-kiwisolver 175s python3-lxml python3-lz4 python3-matplotlib python3-matplotlib-inline 175s python3-mpmath python3-numpy python3-packaging python3-parso python3-pexpect 175s python3-pil python3-pil.imagetk python3-pluggy python3-ply 175s python3-prompt-toolkit python3-ptyprocess python3-pure-eval python3-pytest 175s python3-pytest-arraydiff python3-pytest-astropy 175s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 175s python3-pytest-filter-subpackage python3-pytest-mock 175s python3-pytest-remotedata python3-scipy python3-sortedcontainers 175s python3-stack-data python3-sympy python3-tk python3-traitlets 175s python3-typeshed python3-tz python3-ufolib2 python3-unicodedata2 175s python3-wcwidth python3.12-tk python3.13 python3.13-minimal python3.13-tk 175s tk8.6-blt2.5 unicode-data x11-common 175s 0 upgraded, 112 newly installed, 0 to remove and 0 not upgraded. 175s Need to get 80.0 MB of archives. 175s After this operation, 392 MB of additional disk space will be used. 175s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 176s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 176s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 176s Get:4 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 176s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.15+dfsg-2 [1034 kB] 176s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 176s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 176s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 176s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 176s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 176s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 176s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 176s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 176s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 176s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.15-1 [828 kB] 176s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-7build1 [662 kB] 176s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x blt s390x 2.5.3+dfsg-7build1 [4840 B] 176s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lyx all 2.4.2.1-1 [171 kB] 176s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 176s Get:20 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-parso all 0.8.4-1 [67.6 kB] 176s Get:21 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-typeshed all 0.0~git20231111.6764465-3 [1274 kB] 176s Get:22 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-jedi all 0.19.1+ds1-1 [693 kB] 176s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 176s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib-inline all 0.1.6-2 [8784 B] 176s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x python3-wcwidth all 0.2.13+dfsg1-1 [26.3 kB] 176s Get:26 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-prompt-toolkit all 3.0.48-1 [256 kB] 176s Get:27 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-asttokens all 3.0.0-1 [20.4 kB] 176s Get:28 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-executing all 2.1.0-0.1 [24.4 kB] 176s Get:29 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pure-eval all 0.2.3-1 [11.4 kB] 176s Get:30 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-stack-data all 0.6.3-1 [22.0 kB] 176s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x python3-ptyprocess all 0.7.0-6 [14.8 kB] 176s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pexpect all 4.9-3 [48.1 kB] 176s Get:33 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ipython all 8.29.0-1 [569 kB] 176s Get:34 http://ftpmaster.internal/ubuntu plucky/universe s390x ipython3 all 8.29.0-1 [4938 B] 176s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB] 176s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 176s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-9ubuntu1 [587 kB] 176s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-9ubuntu1 [151 kB] 176s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 176s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.0.1-1 [536 kB] 176s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 177s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 177s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 177s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-metadata all 12-4 [6582 B] 177s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 177s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 177s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 177s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 177s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-sphinxdoc all 7.4.7-4 [158 kB] 177s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB] 177s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 177s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 177s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 177s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 177s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.1-1build1 [16.2 kB] 177s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 177s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 177s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 177s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 177s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x libwcs8 s390x 8.4+ds-1 [293 kB] 177s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB] 177s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB] 177s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libxslt1.1 s390x 1.1.39-0exp1ubuntu1 [169 kB] 177s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x python-matplotlib-data all 3.8.3-3ubuntu1 [2928 kB] 177s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x python3-appdirs all 1.4.4-4 [10.9 kB] 177s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 177s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.2-1 [51.5 kB] 177s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 177s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 177s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-3 [80.2 kB] 177s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x python3-sortedcontainers all 2.4.0-2 [27.6 kB] 177s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-hypothesis all 6.119.3-1 [329 kB] 177s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11ubuntu1 [4602 kB] 177s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-arraydiff all 0.6.1-3 [10.2 kB] 177s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-astropy-header all 0.2.2-2 [8620 B] 177s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 177s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-coverage s390x 7.4.4+dfsg1-0ubuntu3 [150 kB] 177s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 177s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-cov all 5.0.0-1 [21.3 kB] 177s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-doctestplus all 1.3.0-1 [23.7 kB] 177s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-filter-subpackage all 0.2.0-1 [6094 B] 177s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-mock all 3.14.0-2 [11.7 kB] 177s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-remotedata all 0.4.1-1 [8650 B] 177s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest-astropy all 0.11.0-1 [5902 B] 177s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x python3-ply all 3.11-7 [45.4 kB] 177s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-astropy-iers-data all 0.2024.07.22.00.34.13-1 [1198 kB] 177s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x liberfa1 s390x 2.0.1-1build1 [137 kB] 177s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-erfa s390x 2.0.1.5+ds-1 [315 kB] 177s Get:89 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x python3-astropy s390x 7.0.0-1 [4086 kB] 178s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-brotli s390x 1.1.0-2build3 [381 kB] 178s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-contourpy s390x 1.3.0-2build1 [235 kB] 178s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cycler all 0.12.1-1 [9716 B] 178s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2024.1-2 [31.4 kB] 178s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fs all 2.4.16-5 [90.7 kB] 178s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lxml s390x 5.3.0-1build1 [1751 kB] 178s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-lz4 s390x 4.0.2+dfsg-1build5 [27.1 kB] 178s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5ubuntu1 [20.7 MB] 179s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 179s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sympy all 1.13.3-1 [4228 kB] 179s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 179s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-unicodedata2 s390x 15.1.0+ds-1build2 [362 kB] 179s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x unicode-data all 15.1.0-1 [8878 kB] 180s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fonttools s390x 4.55.0-3 [1719 kB] 180s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu1 [208 kB] 180s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu2 [515 kB] 180s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-tk s390x 3.12.7-3 [117 kB] 180s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-tk s390x 3.13.0-2 [107 kB] 180s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tk s390x 3.12.7-1 [9750 B] 180s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pil.imagetk s390x 10.4.0-1ubuntu2 [9444 B] 180s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-kiwisolver s390x 1.4.7-2build1 [65.5 kB] 180s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib s390x 3.8.3-3ubuntu1 [4657 kB] 181s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-imexam s390x 0.9.1-6 [50.5 kB] 182s Fetched 80.0 MB in 6s (14.1 MB/s) 182s Selecting previously unselected package libpython3.13-minimal:s390x. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55869 files and directories currently installed.) 182s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_s390x.deb ... 182s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 182s Selecting previously unselected package python3.13-minimal. 182s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_s390x.deb ... 182s Unpacking python3.13-minimal (3.13.0-2) ... 182s Selecting previously unselected package libjs-jquery. 182s Preparing to unpack .../002-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 182s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 182s Selecting previously unselected package libjs-jquery-hotkeys. 182s Preparing to unpack .../003-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 182s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 182s Selecting previously unselected package libtcl8.6:s390x. 182s Preparing to unpack .../004-libtcl8.6_8.6.15+dfsg-2_s390x.deb ... 182s Unpacking libtcl8.6:s390x (8.6.15+dfsg-2) ... 183s Selecting previously unselected package libfreetype6:s390x. 183s Preparing to unpack .../005-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 183s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 183s Selecting previously unselected package fonts-dejavu-mono. 183s Preparing to unpack .../006-fonts-dejavu-mono_2.37-8_all.deb ... 183s Unpacking fonts-dejavu-mono (2.37-8) ... 183s Selecting previously unselected package fonts-dejavu-core. 183s Preparing to unpack .../007-fonts-dejavu-core_2.37-8_all.deb ... 183s Unpacking fonts-dejavu-core (2.37-8) ... 183s Selecting previously unselected package fontconfig-config. 183s Preparing to unpack .../008-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 183s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 183s Selecting previously unselected package libfontconfig1:s390x. 183s Preparing to unpack .../009-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 183s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 183s Selecting previously unselected package libxrender1:s390x. 183s Preparing to unpack .../010-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 183s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 183s Selecting previously unselected package libxft2:s390x. 183s Preparing to unpack .../011-libxft2_2.3.6-1build1_s390x.deb ... 183s Unpacking libxft2:s390x (2.3.6-1build1) ... 183s Selecting previously unselected package x11-common. 183s Preparing to unpack .../012-x11-common_1%3a7.7+23ubuntu3_all.deb ... 183s Unpacking x11-common (1:7.7+23ubuntu3) ... 183s Selecting previously unselected package libxss1:s390x. 183s Preparing to unpack .../013-libxss1_1%3a1.2.3-1build3_s390x.deb ... 183s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 183s Selecting previously unselected package libtk8.6:s390x. 183s Preparing to unpack .../014-libtk8.6_8.6.15-1_s390x.deb ... 183s Unpacking libtk8.6:s390x (8.6.15-1) ... 183s Selecting previously unselected package tk8.6-blt2.5. 183s Preparing to unpack .../015-tk8.6-blt2.5_2.5.3+dfsg-7build1_s390x.deb ... 183s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 183s Selecting previously unselected package blt. 183s Preparing to unpack .../016-blt_2.5.3+dfsg-7build1_s390x.deb ... 183s Unpacking blt (2.5.3+dfsg-7build1) ... 183s Selecting previously unselected package fonts-lyx. 183s Preparing to unpack .../017-fonts-lyx_2.4.2.1-1_all.deb ... 183s Unpacking fonts-lyx (2.4.2.1-1) ... 183s Selecting previously unselected package python3-decorator. 183s Preparing to unpack .../018-python3-decorator_5.1.1-5_all.deb ... 183s Unpacking python3-decorator (5.1.1-5) ... 183s Selecting previously unselected package python3-parso. 183s Preparing to unpack .../019-python3-parso_0.8.4-1_all.deb ... 183s Unpacking python3-parso (0.8.4-1) ... 183s Selecting previously unselected package python3-typeshed. 183s Preparing to unpack .../020-python3-typeshed_0.0~git20231111.6764465-3_all.deb ... 183s Unpacking python3-typeshed (0.0~git20231111.6764465-3) ... 184s Selecting previously unselected package python3-jedi. 184s Preparing to unpack .../021-python3-jedi_0.19.1+ds1-1_all.deb ... 184s Unpacking python3-jedi (0.19.1+ds1-1) ... 184s Selecting previously unselected package python3-traitlets. 184s Preparing to unpack .../022-python3-traitlets_5.14.3+really5.14.3-1_all.deb ... 184s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ... 184s Selecting previously unselected package python3-matplotlib-inline. 184s Preparing to unpack .../023-python3-matplotlib-inline_0.1.6-2_all.deb ... 184s Unpacking python3-matplotlib-inline (0.1.6-2) ... 184s Selecting previously unselected package python3-wcwidth. 184s Preparing to unpack .../024-python3-wcwidth_0.2.13+dfsg1-1_all.deb ... 184s Unpacking python3-wcwidth (0.2.13+dfsg1-1) ... 184s Selecting previously unselected package python3-prompt-toolkit. 184s Preparing to unpack .../025-python3-prompt-toolkit_3.0.48-1_all.deb ... 184s Unpacking python3-prompt-toolkit (3.0.48-1) ... 185s Selecting previously unselected package python3-asttokens. 185s Preparing to unpack .../026-python3-asttokens_3.0.0-1_all.deb ... 185s Unpacking python3-asttokens (3.0.0-1) ... 185s Selecting previously unselected package python3-executing. 185s Preparing to unpack .../027-python3-executing_2.1.0-0.1_all.deb ... 185s Unpacking python3-executing (2.1.0-0.1) ... 185s Selecting previously unselected package python3-pure-eval. 185s Preparing to unpack .../028-python3-pure-eval_0.2.3-1_all.deb ... 185s Unpacking python3-pure-eval (0.2.3-1) ... 185s Selecting previously unselected package python3-stack-data. 185s Preparing to unpack .../029-python3-stack-data_0.6.3-1_all.deb ... 185s Unpacking python3-stack-data (0.6.3-1) ... 185s Selecting previously unselected package python3-ptyprocess. 185s Preparing to unpack .../030-python3-ptyprocess_0.7.0-6_all.deb ... 185s Unpacking python3-ptyprocess (0.7.0-6) ... 185s Selecting previously unselected package python3-pexpect. 185s Preparing to unpack .../031-python3-pexpect_4.9-3_all.deb ... 185s Unpacking python3-pexpect (4.9-3) ... 185s Selecting previously unselected package python3-ipython. 185s Preparing to unpack .../032-python3-ipython_8.29.0-1_all.deb ... 185s Unpacking python3-ipython (8.29.0-1) ... 185s Selecting previously unselected package ipython3. 185s Preparing to unpack .../033-ipython3_8.29.0-1_all.deb ... 185s Unpacking ipython3 (8.29.0-1) ... 185s Selecting previously unselected package libblas3:s390x. 185s Preparing to unpack .../034-libblas3_3.12.0-4_s390x.deb ... 185s Unpacking libblas3:s390x (3.12.0-4) ... 185s Selecting previously unselected package libdeflate0:s390x. 185s Preparing to unpack .../035-libdeflate0_1.22-1_s390x.deb ... 185s Unpacking libdeflate0:s390x (1.22-1) ... 185s Selecting previously unselected package libgfortran5:s390x. 185s Preparing to unpack .../036-libgfortran5_14.2.0-9ubuntu1_s390x.deb ... 185s Unpacking libgfortran5:s390x (14.2.0-9ubuntu1) ... 185s Selecting previously unselected package libgomp1:s390x. 185s Preparing to unpack .../037-libgomp1_14.2.0-9ubuntu1_s390x.deb ... 185s Unpacking libgomp1:s390x (14.2.0-9ubuntu1) ... 185s Selecting previously unselected package libgraphite2-3:s390x. 185s Preparing to unpack .../038-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 185s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 185s Selecting previously unselected package libharfbuzz0b:s390x. 185s Preparing to unpack .../039-libharfbuzz0b_10.0.1-1_s390x.deb ... 185s Unpacking libharfbuzz0b:s390x (10.0.1-1) ... 185s Selecting previously unselected package libimagequant0:s390x. 185s Preparing to unpack .../040-libimagequant0_2.18.0-1build1_s390x.deb ... 185s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 185s Selecting previously unselected package libjpeg-turbo8:s390x. 185s Preparing to unpack .../041-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 185s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 185s Selecting previously unselected package libjpeg8:s390x. 185s Preparing to unpack .../042-libjpeg8_8c-2ubuntu11_s390x.deb ... 185s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 185s Selecting previously unselected package libjs-jquery-metadata. 185s Preparing to unpack .../043-libjs-jquery-metadata_12-4_all.deb ... 185s Unpacking libjs-jquery-metadata (12-4) ... 185s Selecting previously unselected package libjs-jquery-tablesorter. 185s Preparing to unpack .../044-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 185s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 185s Selecting previously unselected package libjs-jquery-throttle-debounce. 185s Preparing to unpack .../045-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 185s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 185s Selecting previously unselected package libjs-jquery-ui. 185s Preparing to unpack .../046-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 185s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 186s Selecting previously unselected package libjs-underscore. 186s Preparing to unpack .../047-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 186s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 186s Selecting previously unselected package libjs-sphinxdoc. 186s Preparing to unpack .../048-libjs-sphinxdoc_7.4.7-4_all.deb ... 186s Unpacking libjs-sphinxdoc (7.4.7-4) ... 186s Selecting previously unselected package liblapack3:s390x. 186s Preparing to unpack .../049-liblapack3_3.12.0-4_s390x.deb ... 186s Unpacking liblapack3:s390x (3.12.0-4) ... 186s Selecting previously unselected package liblbfgsb0:s390x. 186s Preparing to unpack .../050-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 186s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 186s Selecting previously unselected package liblcms2-2:s390x. 186s Preparing to unpack .../051-liblcms2-2_2.16-2_s390x.deb ... 186s Unpacking liblcms2-2:s390x (2.16-2) ... 186s Selecting previously unselected package libpython3.13-stdlib:s390x. 186s Preparing to unpack .../052-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 186s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 186s Selecting previously unselected package libqhull-r8.0:s390x. 186s Preparing to unpack .../053-libqhull-r8.0_2020.2-6build1_s390x.deb ... 186s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 186s Selecting previously unselected package libraqm0:s390x. 186s Preparing to unpack .../054-libraqm0_0.10.1-1build1_s390x.deb ... 186s Unpacking libraqm0:s390x (0.10.1-1build1) ... 186s Selecting previously unselected package libsharpyuv0:s390x. 186s Preparing to unpack .../055-libsharpyuv0_1.4.0-0.1_s390x.deb ... 186s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 186s Selecting previously unselected package libjbig0:s390x. 186s Preparing to unpack .../056-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 186s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 186s Selecting previously unselected package libwebp7:s390x. 186s Preparing to unpack .../057-libwebp7_1.4.0-0.1_s390x.deb ... 186s Unpacking libwebp7:s390x (1.4.0-0.1) ... 186s Selecting previously unselected package libtiff6:s390x. 186s Preparing to unpack .../058-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 186s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 186s Selecting previously unselected package libwcs8:s390x. 186s Preparing to unpack .../059-libwcs8_8.4+ds-1_s390x.deb ... 186s Unpacking libwcs8:s390x (8.4+ds-1) ... 186s Selecting previously unselected package libwebpdemux2:s390x. 186s Preparing to unpack .../060-libwebpdemux2_1.4.0-0.1_s390x.deb ... 186s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ... 186s Selecting previously unselected package libwebpmux3:s390x. 186s Preparing to unpack .../061-libwebpmux3_1.4.0-0.1_s390x.deb ... 186s Unpacking libwebpmux3:s390x (1.4.0-0.1) ... 187s Selecting previously unselected package libxslt1.1:s390x. 187s Preparing to unpack .../062-libxslt1.1_1.1.39-0exp1ubuntu1_s390x.deb ... 187s Unpacking libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ... 187s Selecting previously unselected package python-matplotlib-data. 187s Preparing to unpack .../063-python-matplotlib-data_3.8.3-3ubuntu1_all.deb ... 187s Unpacking python-matplotlib-data (3.8.3-3ubuntu1) ... 187s Selecting previously unselected package python3-appdirs. 187s Preparing to unpack .../064-python3-appdirs_1.4.4-4_all.deb ... 187s Unpacking python3-appdirs (1.4.4-4) ... 187s Selecting previously unselected package python3-iniconfig. 187s Preparing to unpack .../065-python3-iniconfig_1.1.1-2_all.deb ... 187s Unpacking python3-iniconfig (1.1.1-2) ... 187s Selecting previously unselected package python3-packaging. 187s Preparing to unpack .../066-python3-packaging_24.2-1_all.deb ... 187s Unpacking python3-packaging (24.2-1) ... 187s Selecting previously unselected package python3-pluggy. 187s Preparing to unpack .../067-python3-pluggy_1.5.0-1_all.deb ... 187s Unpacking python3-pluggy (1.5.0-1) ... 187s Selecting previously unselected package python3-pytest. 187s Preparing to unpack .../068-python3-pytest_8.3.3-1_all.deb ... 187s Unpacking python3-pytest (8.3.3-1) ... 187s Selecting previously unselected package python3-dateutil. 187s Preparing to unpack .../069-python3-dateutil_2.9.0-3_all.deb ... 187s Unpacking python3-dateutil (2.9.0-3) ... 187s Selecting previously unselected package python3-sortedcontainers. 187s Preparing to unpack .../070-python3-sortedcontainers_2.4.0-2_all.deb ... 187s Unpacking python3-sortedcontainers (2.4.0-2) ... 187s Selecting previously unselected package python3-hypothesis. 187s Preparing to unpack .../071-python3-hypothesis_6.119.3-1_all.deb ... 187s Unpacking python3-hypothesis (6.119.3-1) ... 187s Selecting previously unselected package python3-numpy. 187s Preparing to unpack .../072-python3-numpy_1%3a1.26.4+ds-11ubuntu1_s390x.deb ... 187s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 187s Selecting previously unselected package python3-pytest-arraydiff. 187s Preparing to unpack .../073-python3-pytest-arraydiff_0.6.1-3_all.deb ... 187s Unpacking python3-pytest-arraydiff (0.6.1-3) ... 187s Selecting previously unselected package python3-pytest-astropy-header. 187s Preparing to unpack .../074-python3-pytest-astropy-header_0.2.2-2_all.deb ... 187s Unpacking python3-pytest-astropy-header (0.2.2-2) ... 187s Selecting previously unselected package python3.13. 187s Preparing to unpack .../075-python3.13_3.13.0-2_s390x.deb ... 187s Unpacking python3.13 (3.13.0-2) ... 188s Selecting previously unselected package python3-coverage. 188s Preparing to unpack .../076-python3-coverage_7.4.4+dfsg1-0ubuntu3_s390x.deb ... 188s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu3) ... 188s Selecting previously unselected package libjs-jquery-isonscreen. 188s Preparing to unpack .../077-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 188s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 188s Selecting previously unselected package python3-pytest-cov. 188s Preparing to unpack .../078-python3-pytest-cov_5.0.0-1_all.deb ... 188s Unpacking python3-pytest-cov (5.0.0-1) ... 188s Selecting previously unselected package python3-pytest-doctestplus. 188s Preparing to unpack .../079-python3-pytest-doctestplus_1.3.0-1_all.deb ... 188s Unpacking python3-pytest-doctestplus (1.3.0-1) ... 188s Selecting previously unselected package python3-pytest-filter-subpackage. 188s Preparing to unpack .../080-python3-pytest-filter-subpackage_0.2.0-1_all.deb ... 188s Unpacking python3-pytest-filter-subpackage (0.2.0-1) ... 188s Selecting previously unselected package python3-pytest-mock. 188s Preparing to unpack .../081-python3-pytest-mock_3.14.0-2_all.deb ... 188s Unpacking python3-pytest-mock (3.14.0-2) ... 188s Selecting previously unselected package python3-pytest-remotedata. 188s Preparing to unpack .../082-python3-pytest-remotedata_0.4.1-1_all.deb ... 188s Unpacking python3-pytest-remotedata (0.4.1-1) ... 188s Selecting previously unselected package python3-pytest-astropy. 188s Preparing to unpack .../083-python3-pytest-astropy_0.11.0-1_all.deb ... 188s Unpacking python3-pytest-astropy (0.11.0-1) ... 188s Selecting previously unselected package python3-ply. 188s Preparing to unpack .../084-python3-ply_3.11-7_all.deb ... 188s Unpacking python3-ply (3.11-7) ... 188s Selecting previously unselected package python3-astropy-iers-data. 188s Preparing to unpack .../085-python3-astropy-iers-data_0.2024.07.22.00.34.13-1_all.deb ... 188s Unpacking python3-astropy-iers-data (0.2024.07.22.00.34.13-1) ... 188s Selecting previously unselected package liberfa1:s390x. 188s Preparing to unpack .../086-liberfa1_2.0.1-1build1_s390x.deb ... 188s Unpacking liberfa1:s390x (2.0.1-1build1) ... 188s Selecting previously unselected package python3-erfa. 188s Preparing to unpack .../087-python3-erfa_2.0.1.5+ds-1_s390x.deb ... 188s Unpacking python3-erfa (2.0.1.5+ds-1) ... 188s Selecting previously unselected package python3-astropy. 188s Preparing to unpack .../088-python3-astropy_7.0.0-1_s390x.deb ... 188s Unpacking python3-astropy (7.0.0-1) ... 189s Selecting previously unselected package python3-brotli. 189s Preparing to unpack .../089-python3-brotli_1.1.0-2build3_s390x.deb ... 189s Unpacking python3-brotli (1.1.0-2build3) ... 189s Selecting previously unselected package python3-contourpy. 189s Preparing to unpack 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(256.5-2ubuntu4) ... 232s Processing triggers for man-db (2.13.0-1) ... 234s Setting up python3.13-tk (3.13.0-2) ... 234s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 234s Setting up blt (2.5.3+dfsg-7build1) ... 234s Setting up python3-tk:s390x (3.12.7-1) ... 234s Setting up python3-pil.imagetk:s390x (10.4.0-1ubuntu2) ... 234s Setting up python3-matplotlib (3.8.3-3ubuntu1) ... 236s Setting up python3-imexam (0.9.1-6) ... 236s Processing triggers for libc-bin (2.40-1ubuntu3) ... 237s autopkgtest [09:38:47]: test command1: cd $AUTOPKGTEST_TMP && MPLBACKEND=Agg python3 -m pytest --pyargs imexam 237s autopkgtest [09:38:47]: test command1: [----------------------- 239s ============================= test session starts ============================== 239s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 239s rootdir: /tmp/autopkgtest.t71lB5/autopkgtest_tmp 239s plugins: cov-5.0.0, astropy-header-0.2.2, filter-subpackage-0.2.0, mock-3.14.0, typeguard-4.4.1, astropy-0.11.0, arraydiff-0.6.1, remotedata-0.4.1, doctestplus-1.3.0, hypothesis-6.119.3 239s collected 21 items 239s 240s tests/test_imexamine.py ..sFFxFFs [ 42%] 240s tests/test_util.py ............ [100%] 240s 240s =================================== FAILURES =================================== 240s ________________________________ test_line_fit _________________________________ 240s 240s def test_line_fit(): 240s """Fit a Gaussian1D line to the data.""" 240s plots = Imexamine() 240s in_amp = 3. 240s in_mean = 50. 240s in_stddev = 2. 240s in_const = 20. 240s 240s # Set all the lines to be Gaussians 240s line_gauss = in_const + in_amp * np.exp(-0.5 * ((xx - in_mean) / in_stddev)**2) 240s plots.set_data(line_gauss) 240s > fit = plots.line_fit(50, 50, form='Gaussian1D', genplot=False) 240s 240s /usr/lib/python3/dist-packages/imexam/tests/test_imexamine.py:86: 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:765: in line_fit 240s amp, xout, yout, sigma, sigmay = self.gauss_center(xx, 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1007: in gauss_center 240s fit = math_helper.fit_gaussian_2d(chunk, sigma_factor=sigma_factor) 240s /usr/lib/python3/dist-packages/imexam/math_helper.py:254: in fit_gaussian_2d 240s results = fit(model, xx, yy, data) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:303: in wrapper 240s return func(self, model, x, y, z=z, **kwargs) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1434: in __call__ 240s init_values, fitparams, cov_x = self._run_fitter( 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1509: in _run_fitter 240s fitparams, cov_x, dinfo, mess, ierr = optimize.leastsq( 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:437: in leastsq 240s _check_func('leastsq', 'Dfun', Dfun, x0, args, n, (n, m)) 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:29: in _check_func 240s res = atleast_1d(thefunc(*((x0[:numinputs],) + args))) 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s 240s params = array([ 3., 15., 15., 3., 3., 0., 20.]) 240s model = 240s weights = 1.0 240s x = array([[ 0., 1., 2., 3., 4., 5., 6., 7., 8., 9., 10., 11., 12., 240s 13., 14., 15., 16., 17., 18., 19., 20..., 10., 11., 12., 240s 13., 14., 15., 16., 17., 18., 19., 20., 21., 22., 23., 24., 25., 240s 26., 27., 28., 29.]]) 240s y = array([[ 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 240s 0., 0., 0., 0., 0., 0., 0., 0..., 29., 29., 29., 240s 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 240s 29., 29., 29., 29.]]) 240s z = array([[20. , 20. , 20. , 20.00000005, 20.00000081, 240s 20.00001118, 20.0001202 , 20.00100639...2699, 20.00656247, 20.00100639, 20.0001202 , 240s 20.00001118, 20.00000081, 20.00000005, 20. , 20. ]]) 240s fit_param_indices = None 240s 240s @staticmethod 240s def _wrap_deriv(params, model, weights, x, y, z=None, fit_param_indices=None): 240s """ 240s Wraps the method calculating the Jacobian of the function to account 240s for model constraints. 240s `scipy.optimize.leastsq` expects the function derivative to have the 240s above signature (parlist, (argtuple)). In order to accommodate model 240s constraints, instead of using p directly, we set the parameter list in 240s this function. 240s """ 240s if weights is None: 240s weights = 1.0 240s 240s if model.has_fixed or model.has_tied: 240s # update the parameters with the current values from the fitter 240s fitter_to_model_params(model, params) 240s if z is None: 240s full = np.array(model.fit_deriv(x, *model.parameters)) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s else: 240s full = np.array( 240s [np.ravel(_) for _ in model.fit_deriv(x, y, *model.parameters)] 240s ) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s 240s pars = [getattr(model, name) for name in model.param_names] 240s fixed = [par.fixed for par in pars] 240s tied = [par.tied for par in pars] 240s tied = list(np.where([par.tied is not False for par in pars], True, tied)) 240s fix_and_tie = np.logical_or(fixed, tied) 240s ind = np.logical_not(fix_and_tie) 240s 240s if not model.col_fit_deriv: 240s residues = np.asarray(full_deriv[np.nonzero(ind)]).T 240s else: 240s residues = full_deriv[np.nonzero(ind)] 240s 240s return [np.ravel(_) for _ in residues] 240s else: 240s if z is None: 240s fit_deriv = np.array(model.fit_deriv(x, *params)) 240s try: 240s output = np.array( 240s [np.ravel(_) for _ in np.array(weights) * fit_deriv] 240s ) 240s if output.shape != fit_deriv.shape: 240s output = np.array( 240s [np.ravel(_) for _ in np.atleast_2d(weights).T * fit_deriv] 240s ) 240s return output 240s except ValueError: 240s return np.array( 240s [ 240s np.ravel(_) 240s for _ in np.array(weights) * np.moveaxis(fit_deriv, -1, 0) 240s ] 240s ).transpose() 240s else: 240s if not model.col_fit_deriv: 240s return [ 240s np.ravel(_) 240s for _ in ( 240s np.ravel(weights) 240s * np.array(model.fit_deriv(x, y, *params)).T 240s ).T 240s ] 240s return [ 240s np.ravel(_) 240s > for _ in weights * np.array(model.fit_deriv(x, y, *params)) 240s ] 240s E ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (7,) + inhomogeneous part. 240s 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1287: ValueError 240s ----------------------------- Captured stdout call ----------------------------- 240s using model: 240s Name: Gaussian1D 240s N_inputs: 1 240s N_outputs: 1 240s Fittable parameters: ('amplitude', 'mean', 'stddev') 240s ------------------------------ Captured log call ------------------------------- 240s INFO imexam.util:imexamine.py:749 using model: 240s Name: Gaussian1D 240s N_inputs: 1 240s N_outputs: 1 240s Fittable parameters: ('amplitude', 'mean', 'stddev') 240s _______________________________ test_column_fit ________________________________ 240s 240s def test_column_fit(): 240s """Fit a Gaussian1D column to the data.""" 240s plots = Imexamine() 240s in_amp = 3. 240s in_mean = 50. 240s in_stddev = 2. 240s in_const = 20. 240s # Set all the columns to be Gaussians 240s col_gauss = in_const + in_amp * np.exp(-0.5 * ((yy - in_mean) / in_stddev)**2) 240s plots.set_data(col_gauss) 240s > fit = plots.column_fit(50, 50, form='Gaussian1D', genplot=False) 240s 240s /usr/lib/python3/dist-packages/imexam/tests/test_imexamine.py:104: 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:917: in column_fit 240s result = self.line_fit(x, y, data=data, form=form, 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:765: in line_fit 240s amp, xout, yout, sigma, sigmay = self.gauss_center(xx, 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1007: in gauss_center 240s fit = math_helper.fit_gaussian_2d(chunk, sigma_factor=sigma_factor) 240s /usr/lib/python3/dist-packages/imexam/math_helper.py:254: in fit_gaussian_2d 240s results = fit(model, xx, yy, data) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:303: in wrapper 240s return func(self, model, x, y, z=z, **kwargs) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1434: in __call__ 240s init_values, fitparams, cov_x = self._run_fitter( 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1509: in _run_fitter 240s fitparams, cov_x, dinfo, mess, ierr = optimize.leastsq( 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:437: in leastsq 240s _check_func('leastsq', 'Dfun', Dfun, x0, args, n, (n, m)) 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:29: in _check_func 240s res = atleast_1d(thefunc(*((x0[:numinputs],) + args))) 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s 240s params = array([ 3., 15., 15., 3., 3., 0., 20.]) 240s model = 240s weights = 1.0 240s x = array([[ 0., 1., 2., 3., 4., 5., 6., 7., 8., 9., 10., 11., 12., 240s 13., 14., 15., 16., 17., 18., 19., 20..., 10., 11., 12., 240s 13., 14., 15., 16., 17., 18., 19., 20., 21., 22., 23., 24., 25., 240s 26., 27., 28., 29.]]) 240s y = array([[ 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 240s 0., 0., 0., 0., 0., 0., 0., 0..., 29., 29., 29., 240s 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 29., 240s 29., 29., 29., 29.]]) 240s z = array([[20. , 20. , 20. , 20. , 20. , 240s 20. , 20. , 20. ... , 20. , 20. , 20. , 240s 20. , 20. , 20. , 20. , 20. ]]) 240s fit_param_indices = None 240s 240s @staticmethod 240s def _wrap_deriv(params, model, weights, x, y, z=None, fit_param_indices=None): 240s """ 240s Wraps the method calculating the Jacobian of the function to account 240s for model constraints. 240s `scipy.optimize.leastsq` expects the function derivative to have the 240s above signature (parlist, (argtuple)). In order to accommodate model 240s constraints, instead of using p directly, we set the parameter list in 240s this function. 240s """ 240s if weights is None: 240s weights = 1.0 240s 240s if model.has_fixed or model.has_tied: 240s # update the parameters with the current values from the fitter 240s fitter_to_model_params(model, params) 240s if z is None: 240s full = np.array(model.fit_deriv(x, *model.parameters)) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s else: 240s full = np.array( 240s [np.ravel(_) for _ in model.fit_deriv(x, y, *model.parameters)] 240s ) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s 240s pars = [getattr(model, name) for name in model.param_names] 240s fixed = [par.fixed for par in pars] 240s tied = [par.tied for par in pars] 240s tied = list(np.where([par.tied is not False for par in pars], True, tied)) 240s fix_and_tie = np.logical_or(fixed, tied) 240s ind = np.logical_not(fix_and_tie) 240s 240s if not model.col_fit_deriv: 240s residues = np.asarray(full_deriv[np.nonzero(ind)]).T 240s else: 240s residues = full_deriv[np.nonzero(ind)] 240s 240s return [np.ravel(_) for _ in residues] 240s else: 240s if z is None: 240s fit_deriv = np.array(model.fit_deriv(x, *params)) 240s try: 240s output = np.array( 240s [np.ravel(_) for _ in np.array(weights) * fit_deriv] 240s ) 240s if output.shape != fit_deriv.shape: 240s output = np.array( 240s [np.ravel(_) for _ in np.atleast_2d(weights).T * fit_deriv] 240s ) 240s return output 240s except ValueError: 240s return np.array( 240s [ 240s np.ravel(_) 240s for _ in np.array(weights) * np.moveaxis(fit_deriv, -1, 0) 240s ] 240s ).transpose() 240s else: 240s if not model.col_fit_deriv: 240s return [ 240s np.ravel(_) 240s for _ in ( 240s np.ravel(weights) 240s * np.array(model.fit_deriv(x, y, *params)).T 240s ).T 240s ] 240s return [ 240s np.ravel(_) 240s > for _ in weights * np.array(model.fit_deriv(x, y, *params)) 240s ] 240s E ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (7,) + inhomogeneous part. 240s 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1287: ValueError 240s ----------------------------- Captured stdout call ----------------------------- 240s using model: 240s Name: Gaussian1D 240s N_inputs: 1 240s N_outputs: 1 240s Fittable parameters: ('amplitude', 'mean', 'stddev') 240s ------------------------------ Captured log call ------------------------------- 240s INFO imexam.util:imexamine.py:749 using model: 240s Name: Gaussian1D 240s N_inputs: 1 240s N_outputs: 1 240s Fittable parameters: ('amplitude', 'mean', 'stddev') 240s _____________________________ test_radial_profile ______________________________ 240s 240s def test_radial_profile(): 240s """Test the radial profile function 240s No background subtraction 240s individual pixel results used 240s """ 240s from astropy.convolution import Gaussian2DKernel 240s data = Gaussian2DKernel(1.5, x_size=25, y_size=25) 240s xx, yy = np.meshgrid(np.arange(25), np.arange(25)) 240s x0, y0 = np.where(data.array == data.array.max()) 240s 240s rad_in = np.sqrt((xx - x0)**2 + (yy - y0)**2) 240s rad_in = rad_in.ravel() 240s flux_in = data.array.ravel() 240s 240s order = np.argsort(rad_in) 240s rad_in = rad_in[order] 240s flux_in = flux_in[order] 240s 240s plots = Imexamine() 240s plots.set_data(data.array) 240s 240s plots.radial_profile_pars['pixels'][0] = True 240s plots.radial_profile_pars['background'][0] = False 240s plots.radial_profile_pars['clip'][0] = False 240s > rad_out, flux_out = plots.radial_profile(x0, y0, genplot=False) 240s 240s /usr/lib/python3/dist-packages/imexam/tests/test_imexamine.py:160: 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1102: in radial_profile 240s amp, centerx, centery, sigmax, sigmay = self.gauss_center(xx, yy, data, delta=datasize) 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1007: in gauss_center 240s fit = math_helper.fit_gaussian_2d(chunk, sigma_factor=sigma_factor) 240s /usr/lib/python3/dist-packages/imexam/math_helper.py:254: in fit_gaussian_2d 240s results = fit(model, xx, yy, data) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:303: in wrapper 240s return func(self, model, x, y, z=z, **kwargs) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1434: in __call__ 240s init_values, fitparams, cov_x = self._run_fitter( 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1509: in _run_fitter 240s fitparams, cov_x, dinfo, mess, ierr = optimize.leastsq( 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:437: in leastsq 240s _check_func('leastsq', 'Dfun', Dfun, x0, args, n, (n, m)) 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:29: in _check_func 240s res = atleast_1d(thefunc(*((x0[:numinputs],) + args))) 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s 240s params = array([7.06778109e-02, 4.00000000e+00, 4.00000000e+00, 3.00000000e+00, 240s 3.00000000e+00, 0.00000000e+00, 5.77193322e-05]) 240s model = 240s weights = 1.0 240s x = array([[0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., ... [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.]]) 240s y = array([[0., 0., 0., 0., 0., 0., 0., 0.], 240s [1., 1., 1., 1., 1., 1., 1., 1.], 240s [2., 2., 2., 2., 2., 2., 2., ... [5., 5., 5., 5., 5., 5., 5., 5.], 240s [6., 6., 6., 6., 6., 6., 6., 6.], 240s [7., 7., 7., 7., 7., 7., 7., 7.]]) 240s z = array([[5.77193322e-05, 2.73457911e-04, 8.30691786e-04, 1.61796667e-03, 240s 2.02059585e-03, 1.61796667e-03, 8.3069...29556643e-03, 3.93558331e-03, 7.66546959e-03, 240s 9.57301302e-03, 7.66546959e-03, 3.93558331e-03, 1.29556643e-03]]) 240s fit_param_indices = None 240s 240s @staticmethod 240s def _wrap_deriv(params, model, weights, x, y, z=None, fit_param_indices=None): 240s """ 240s Wraps the method calculating the Jacobian of the function to account 240s for model constraints. 240s `scipy.optimize.leastsq` expects the function derivative to have the 240s above signature (parlist, (argtuple)). In order to accommodate model 240s constraints, instead of using p directly, we set the parameter list in 240s this function. 240s """ 240s if weights is None: 240s weights = 1.0 240s 240s if model.has_fixed or model.has_tied: 240s # update the parameters with the current values from the fitter 240s fitter_to_model_params(model, params) 240s if z is None: 240s full = np.array(model.fit_deriv(x, *model.parameters)) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s else: 240s full = np.array( 240s [np.ravel(_) for _ in model.fit_deriv(x, y, *model.parameters)] 240s ) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s 240s pars = [getattr(model, name) for name in model.param_names] 240s fixed = [par.fixed for par in pars] 240s tied = [par.tied for par in pars] 240s tied = list(np.where([par.tied is not False for par in pars], True, tied)) 240s fix_and_tie = np.logical_or(fixed, tied) 240s ind = np.logical_not(fix_and_tie) 240s 240s if not model.col_fit_deriv: 240s residues = np.asarray(full_deriv[np.nonzero(ind)]).T 240s else: 240s residues = full_deriv[np.nonzero(ind)] 240s 240s return [np.ravel(_) for _ in residues] 240s else: 240s if z is None: 240s fit_deriv = np.array(model.fit_deriv(x, *params)) 240s try: 240s output = np.array( 240s [np.ravel(_) for _ in np.array(weights) * fit_deriv] 240s ) 240s if output.shape != fit_deriv.shape: 240s output = np.array( 240s [np.ravel(_) for _ in np.atleast_2d(weights).T * fit_deriv] 240s ) 240s return output 240s except ValueError: 240s return np.array( 240s [ 240s np.ravel(_) 240s for _ in np.array(weights) * np.moveaxis(fit_deriv, -1, 0) 240s ] 240s ).transpose() 240s else: 240s if not model.col_fit_deriv: 240s return [ 240s np.ravel(_) 240s for _ in ( 240s np.ravel(weights) 240s * np.array(model.fit_deriv(x, y, *params)).T 240s ).T 240s ] 240s return [ 240s np.ravel(_) 240s > for _ in weights * np.array(model.fit_deriv(x, y, *params)) 240s ] 240s E ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (7,) + inhomogeneous part. 240s 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1287: ValueError 240s ________________________ test_radial_profile_cumulative ________________________ 240s 240s def test_radial_profile_cumulative(): 240s """Test the radial profile function 240s without background subtraction 240s with each pixel integer binned 240s """ 240s from astropy.convolution import Gaussian2DKernel 240s ksize = 25 240s data = Gaussian2DKernel(1.5, x_size=ksize, y_size=ksize) 240s xx, yy = np.meshgrid(np.arange(ksize), np.arange(ksize)) 240s x0, y0 = np.where(data.array == data.array.max()) 240s rad_in = np.sqrt((xx - x0)**2 + (yy - y0)**2) 240s 240s rad_in = rad_in.ravel() 240s flux_in = data.array.ravel() 240s 240s indices = np.argsort(rad_in) 240s rad_in = rad_in[indices] 240s flux_in = flux_in[indices] 240s 240s # now bin the radflux like we expect 240s rad_in = rad_in.astype(int) 240s flux_in = np.bincount(rad_in, flux_in) / np.bincount(rad_in) 240s rad_in = np.arange(len(flux_in)) 240s assert (data.array[x0, y0] == flux_in[0]) 240s 240s # check the binned results 240s plots = Imexamine() 240s plots.set_data(data.array) 240s plots.radial_profile_pars['pixels'][0] = False 240s plots.radial_profile_pars['background'][0] = False 240s plots.radial_profile_pars['clip'][0] = False 240s > rad_out, flux_out = plots.radial_profile(x0, y0, genplot=False) 240s 240s /usr/lib/python3/dist-packages/imexam/tests/test_imexamine.py:206: 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1102: in radial_profile 240s amp, centerx, centery, sigmax, sigmay = self.gauss_center(xx, yy, data, delta=datasize) 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1007: in gauss_center 240s fit = math_helper.fit_gaussian_2d(chunk, sigma_factor=sigma_factor) 240s /usr/lib/python3/dist-packages/imexam/math_helper.py:254: in fit_gaussian_2d 240s results = fit(model, xx, yy, data) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:303: in wrapper 240s return func(self, model, x, y, z=z, **kwargs) 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1434: in __call__ 240s init_values, fitparams, cov_x = self._run_fitter( 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1509: in _run_fitter 240s fitparams, cov_x, dinfo, mess, ierr = optimize.leastsq( 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:437: in leastsq 240s _check_func('leastsq', 'Dfun', Dfun, x0, args, n, (n, m)) 240s /usr/lib/python3/dist-packages/scipy/optimize/_minpack_py.py:29: in _check_func 240s res = atleast_1d(thefunc(*((x0[:numinputs],) + args))) 240s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 240s 240s params = array([7.06778109e-02, 4.00000000e+00, 4.00000000e+00, 3.00000000e+00, 240s 3.00000000e+00, 0.00000000e+00, 5.77193322e-05]) 240s model = 240s weights = 1.0 240s x = array([[0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., ... [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.], 240s [0., 1., 2., 3., 4., 5., 6., 7.]]) 240s y = array([[0., 0., 0., 0., 0., 0., 0., 0.], 240s [1., 1., 1., 1., 1., 1., 1., 1.], 240s [2., 2., 2., 2., 2., 2., 2., ... [5., 5., 5., 5., 5., 5., 5., 5.], 240s [6., 6., 6., 6., 6., 6., 6., 6.], 240s [7., 7., 7., 7., 7., 7., 7., 7.]]) 240s z = array([[5.77193322e-05, 2.73457911e-04, 8.30691786e-04, 1.61796667e-03, 240s 2.02059585e-03, 1.61796667e-03, 8.3069...29556643e-03, 3.93558331e-03, 7.66546959e-03, 240s 9.57301302e-03, 7.66546959e-03, 3.93558331e-03, 1.29556643e-03]]) 240s fit_param_indices = None 240s 240s @staticmethod 240s def _wrap_deriv(params, model, weights, x, y, z=None, fit_param_indices=None): 240s """ 240s Wraps the method calculating the Jacobian of the function to account 240s for model constraints. 240s `scipy.optimize.leastsq` expects the function derivative to have the 240s above signature (parlist, (argtuple)). In order to accommodate model 240s constraints, instead of using p directly, we set the parameter list in 240s this function. 240s """ 240s if weights is None: 240s weights = 1.0 240s 240s if model.has_fixed or model.has_tied: 240s # update the parameters with the current values from the fitter 240s fitter_to_model_params(model, params) 240s if z is None: 240s full = np.array(model.fit_deriv(x, *model.parameters)) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s else: 240s full = np.array( 240s [np.ravel(_) for _ in model.fit_deriv(x, y, *model.parameters)] 240s ) 240s if not model.col_fit_deriv: 240s full_deriv = np.ravel(weights) * full.T 240s else: 240s full_deriv = np.ravel(weights) * full 240s 240s pars = [getattr(model, name) for name in model.param_names] 240s fixed = [par.fixed for par in pars] 240s tied = [par.tied for par in pars] 240s tied = list(np.where([par.tied is not False for par in pars], True, tied)) 240s fix_and_tie = np.logical_or(fixed, tied) 240s ind = np.logical_not(fix_and_tie) 240s 240s if not model.col_fit_deriv: 240s residues = np.asarray(full_deriv[np.nonzero(ind)]).T 240s else: 240s residues = full_deriv[np.nonzero(ind)] 240s 240s return [np.ravel(_) for _ in residues] 240s else: 240s if z is None: 240s fit_deriv = np.array(model.fit_deriv(x, *params)) 240s try: 240s output = np.array( 240s [np.ravel(_) for _ in np.array(weights) * fit_deriv] 240s ) 240s if output.shape != fit_deriv.shape: 240s output = np.array( 240s [np.ravel(_) for _ in np.atleast_2d(weights).T * fit_deriv] 240s ) 240s return output 240s except ValueError: 240s return np.array( 240s [ 240s np.ravel(_) 240s for _ in np.array(weights) * np.moveaxis(fit_deriv, -1, 0) 240s ] 240s ).transpose() 240s else: 240s if not model.col_fit_deriv: 240s return [ 240s np.ravel(_) 240s for _ in ( 240s np.ravel(weights) 240s * np.array(model.fit_deriv(x, y, *params)).T 240s ).T 240s ] 240s return [ 240s np.ravel(_) 240s > for _ in weights * np.array(model.fit_deriv(x, y, *params)) 240s ] 240s E ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 1 dimensions. The detected shape was (7,) + inhomogeneous part. 240s 240s /usr/lib/python3/dist-packages/astropy/modeling/fitting.py:1287: ValueError 240s =============================== warnings summary =============================== 240s ../../../usr/lib/python3/dist-packages/imexam/__init__.py:12 240s /usr/lib/python3/dist-packages/imexam/__init__.py:12: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 240s from pkg_resources import get_distribution, DistributionNotFound 240s 240s tests/test_imexamine.py::test_radial_profile 240s tests/test_imexamine.py::test_radial_profile_cumulative 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1097: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 240s xx = int(x) 240s 240s tests/test_imexamine.py::test_radial_profile 240s tests/test_imexamine.py::test_radial_profile_cumulative 240s /usr/lib/python3/dist-packages/imexam/imexamine.py:1098: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 240s yy = int(y) 240s 240s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 240s =========================== short test summary info ============================ 240s FAILED tests/test_imexamine.py::test_line_fit - ValueError: setting an array ... 240s FAILED tests/test_imexamine.py::test_column_fit - ValueError: setting an arra... 240s FAILED tests/test_imexamine.py::test_radial_profile - ValueError: setting an ... 240s FAILED tests/test_imexamine.py::test_radial_profile_cumulative - ValueError: ... 240s ======== 4 failed, 14 passed, 2 skipped, 1 xfailed, 5 warnings in 2.40s ======== 241s autopkgtest [09:38:51]: test command1: -----------------------] 241s autopkgtest [09:38:51]: test command1: - - - - - - - - - - results - - - - - - - - - - 241s command1 FAIL non-zero exit status 1 242s autopkgtest [09:38:52]: @@@@@@@@@@@@@@@@@@@@ summary 242s command1 FAIL non-zero exit status 1 256s nova [W] Using flock in prodstack6-s390x 256s flock: timeout while waiting to get lock 256s Creating nova instance adt-plucky-s390x-imexam-20241203-093449-juju-7f2275-prod-proposed-migration-environment-2-18ecdafa-691d-4295-96b9-7d32ceba2baa from image adt/ubuntu-plucky-s390x-server-20241203.img (UUID 1a991c1c-46bc-40f7-9cba-4c8bff864ded)...