0s autopkgtest [11:25:47]: starting date and time: 2024-11-13 11:25:47+0000 0s autopkgtest [11:25:47]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [11:25:47]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wlj0i9b7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade gudhi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-14.secgroup --name adt-plucky-s390x-gudhi-20241113-112547-juju-7f2275-prod-proposed-migration-environment-15-e74f2eab-0b8a-4e12-a436-af5df901d9e8 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 107s autopkgtest [11:27:34]: testbed dpkg architecture: s390x 108s autopkgtest [11:27:34]: testbed apt version: 2.9.8 108s autopkgtest [11:27:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 108s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 109s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 109s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 109s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [85.8 kB] 109s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [565 kB] 109s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [16.6 kB] 109s Fetched 1689 kB in 1s (2311 kB/s) 109s Reading package lists... 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 112s Calculating upgrade... 112s The following NEW packages will be installed: 112s python3.13-gdbm 112s The following packages will be upgraded: 112s libgpgme11t64 libpython3-stdlib python3 python3-gdbm python3-minimal 112s 5 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 112s Need to get 252 kB of archives. 112s After this operation, 98.3 kB of additional disk space will be used. 112s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB] 112s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB] 112s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB] 112s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 112s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 112s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB] 112s Fetched 252 kB in 0s (630 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 112s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ... 112s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 113s Setting up python3-minimal (3.12.7-1) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 113s Preparing to unpack .../python3_3.12.7-1_s390x.deb ... 113s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 113s Preparing to unpack .../libpython3-stdlib_3.12.7-1_s390x.deb ... 113s Unpacking libpython3-stdlib:s390x (3.12.7-1) over (3.12.6-0ubuntu1) ... 113s Selecting previously unselected package python3.13-gdbm. 113s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ... 113s Unpacking python3.13-gdbm (3.13.0-2) ... 113s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ... 113s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 113s Preparing to unpack .../libgpgme11t64_1.23.2-5ubuntu4_s390x.deb ... 113s Unpacking libgpgme11t64:s390x (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 113s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ... 113s Setting up python3.13-gdbm (3.13.0-2) ... 113s Setting up libpython3-stdlib:s390x (3.12.7-1) ... 113s Setting up python3 (3.12.7-1) ... 113s Setting up python3-gdbm:s390x (3.12.7-1) ... 113s Processing triggers for man-db (2.12.1-3) ... 113s Processing triggers for libc-bin (2.40-1ubuntu3) ... 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 114s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 114s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 114s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 115s Reading package lists... 115s Reading package lists... 115s Building dependency tree... 116s Reading state information... 116s Calculating upgrade... 116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s autopkgtest [11:27:46]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 119s autopkgtest [11:27:46]: @@@@@@@@@@@@@@@@@@@@ apt-source gudhi 124s Get:1 http://ftpmaster.internal/ubuntu plucky/universe gudhi 3.10.1+dfsg-1 (dsc) [3273 B] 124s Get:2 http://ftpmaster.internal/ubuntu plucky/universe gudhi 3.10.1+dfsg-1 (tar) [17.8 MB] 124s Get:3 http://ftpmaster.internal/ubuntu plucky/universe gudhi 3.10.1+dfsg-1 (diff) [11.5 kB] 125s gpgv: Signature made Thu Jul 4 13:27:51 2024 UTC 125s gpgv: using RSA key CFC5EF8510851E7355B55E809D11582AFD548CFA 125s gpgv: issuer "gspr@nonempty.org" 125s gpgv: Can't check signature: No public key 125s dpkg-source: warning: cannot verify inline signature for ./gudhi_3.10.1+dfsg-1.dsc: no acceptable signature found 126s autopkgtest [11:27:53]: testing package gudhi version 3.10.1+dfsg-1 127s autopkgtest [11:27:54]: build not needed 130s autopkgtest [11:27:57]: test python-upstream.sh: preparing testbed 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s Starting pkgProblemResolver with broken count: 0 135s Starting 2 pkgProblemResolver with broken count: 0 135s Done 136s The following additional packages will be installed: 136s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libblas3 136s libdeflate0 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 136s libharfbuzz0b libhwloc15 libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 136s libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 libopenjp2-7 136s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0 136s libsharpyuv0 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtiff6 136s libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 136s libxss1 python-matplotlib-data python3-all python3-appdirs python3-brotli 136s python3-contourpy python3-cycler python3-dateutil python3-decorator 136s python3-eagerpy python3-fonttools python3-fs python3-gudhi python3-iniconfig 136s python3-joblib python3-kiwisolver python3-lxml python3-lz4 136s python3-matplotlib python3-mpmath python3-numpy python3-packaging 136s python3-pil python3-pil.imagetk python3-pluggy python3-pot python3-pytest 136s python3-scipy python3-six python3-sklearn python3-sklearn-lib python3-sympy 136s python3-threadpoolctl python3-tk python3-tz python3-ufolib2 python3.12-tk 136s python3.13 python3.13-minimal python3.13-tk tk8.6-blt2.5 unicode-data 136s x11-common 136s Suggested packages: 136s blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc 136s python3-torch python-joblib-doc python-lxml-doc cm-super-minimal dvipng 136s ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 136s librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi-cairo 136s python3-gobject python3-pyqt5 python3-sip python3-tornado 136s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc 136s gfortran python-numpy-doc python3-dev python-pil-doc python-scipy-doc 136s python3-dap python-sklearn-doc texlive-fonts-extra python-sympy-doc tix 136s python3-tk-dbg python3.13-venv python3.13-doc binfmt-support 136s Recommended packages: 136s libhwloc-plugins javascript-common python3-simplejson python3-psutil 136s python3-bs4 python3-cssselect python3-html5lib python3-olefile g++ 136s | c++-compiler isympy-common 136s The following NEW packages will be installed: 136s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 136s fonts-lyx libblas3 libdeflate0 libfontconfig1 libfreetype6 libgfortran5 136s libgomp1 libgraphite2-3 libharfbuzz0b libhwloc15 libimagequant0 libjbig0 136s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 136s liblcms2-2 libopenjp2-7 libpython3.13-minimal libpython3.13-stdlib 136s libqhull-r8.0 libraqm0 libsharpyuv0 libtbb12 libtbbbind-2-5 libtbbmalloc2 136s libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 136s libxrender1 libxslt1.1 libxss1 python-matplotlib-data python3-all 136s python3-appdirs python3-brotli python3-contourpy python3-cycler 136s python3-dateutil python3-decorator python3-eagerpy python3-fonttools 136s python3-fs python3-gudhi python3-iniconfig python3-joblib python3-kiwisolver 136s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 136s python3-packaging python3-pil python3-pil.imagetk python3-pluggy python3-pot 136s python3-pytest python3-scipy python3-six python3-sklearn python3-sklearn-lib 136s python3-sympy python3-threadpoolctl python3-tk python3-tz python3-ufolib2 136s python3.12-tk python3.13 python3.13-minimal python3.13-tk tk8.6-blt2.5 136s unicode-data x11-common 136s 0 upgraded, 85 newly installed, 0 to remove and 0 not upgraded. 136s Need to get 73.6 MB/73.6 MB of archives. 136s After this operation, 309 MB of additional disk space will be used. 136s Get:1 /tmp/autopkgtest.0jMDrr/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [756 B] 136s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 136s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 136s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.15+dfsg-2 [1034 kB] 136s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 136s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 136s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 136s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 136s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 136s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 136s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 136s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 136s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 137s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.15-1 [828 kB] 137s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-7build1 [662 kB] 137s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x blt s390x 2.5.3+dfsg-7build1 [4840 B] 137s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lyx all 2.4.2.1-1 [171 kB] 137s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 137s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 137s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 137s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-8ubuntu1 [151 kB] 137s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 137s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.0.1-1 [536 kB] 137s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.11.2-1 [176 kB] 137s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 137s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB] 137s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 137s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 137s Get:29 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 137s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 137s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 137s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 137s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 137s Get:34 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 137s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.1-1build1 [16.2 kB] 137s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 137s Get:37 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbbmalloc2 s390x 2021.12.0-1ubuntu2 [57.2 kB] 137s Get:38 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbbbind-2-5 s390x 2021.12.0-1ubuntu2 [15.4 kB] 137s Get:39 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbb12 s390x 2021.12.0-1ubuntu2 [96.2 kB] 137s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 137s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 137s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 137s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB] 137s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB] 137s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libxslt1.1 s390x 1.1.39-0exp1ubuntu1 [169 kB] 137s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x python-matplotlib-data all 3.8.3-3 [2928 kB] 137s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 137s Get:48 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B] 137s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x python3-appdirs all 1.4.4-4 [10.9 kB] 137s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-brotli s390x 1.1.0-2build2 [376 kB] 137s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 137s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-contourpy s390x 1.3.0-2 [195 kB] 137s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cycler all 0.12.1-1 [9716 B] 137s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x python3-six all 1.16.0-7 [13.1 kB] 137s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-2 [80.3 kB] 137s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 137s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-eagerpy all 0.30.0-3 [19.0 kB] 137s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5 [17.5 MB] 138s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 138s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 138s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sympy all 1.13.3-1 [4228 kB] 138s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2024.1-2 [31.4 kB] 138s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fs all 2.4.16-4 [91.3 kB] 138s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lxml s390x 5.3.0-1 [1314 kB] 138s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-lz4 s390x 4.0.2+dfsg-1build4 [26.4 kB] 138s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x unicode-data all 15.1.0-1 [8878 kB] 138s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fonttools s390x 4.46.0-1build2 [1453 kB] 138s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-gudhi s390x 3.10.1+dfsg-1 [1737 kB] 138s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 138s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.3.2-5 [206 kB] 138s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-kiwisolver s390x 1.4.7-2 [54.9 kB] 138s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu1 [208 kB] 138s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu1 [492 kB] 139s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-tk s390x 3.12.7-3 [117 kB] 139s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-tk s390x 3.13.0-2 [107 kB] 139s Get:76 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-tk s390x 3.12.7-1 [9750 B] 139s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pil.imagetk s390x 10.4.0-1ubuntu1 [9314 B] 139s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB] 139s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib s390x 3.8.3-3 [4554 kB] 139s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 139s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pot s390x 0.9.4+dfsg-1 [234 kB] 139s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 139s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-threadpoolctl all 3.1.0-1 [21.3 kB] 139s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn-lib s390x 1.4.2+dfsg-6 [4036 kB] 139s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sklearn all 1.4.2+dfsg-6 [2257 kB] 139s Fetched 73.6 MB in 3s (22.7 MB/s) 139s Selecting previously unselected package libpython3.13-minimal:s390x. 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 139s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_s390x.deb ... 139s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 139s Selecting previously unselected package python3.13-minimal. 139s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_s390x.deb ... 139s Unpacking python3.13-minimal (3.13.0-2) ... 139s Selecting previously unselected package libtcl8.6:s390x. 139s Preparing to unpack .../02-libtcl8.6_8.6.15+dfsg-2_s390x.deb ... 139s Unpacking libtcl8.6:s390x (8.6.15+dfsg-2) ... 139s Selecting previously unselected package libfreetype6:s390x. 139s Preparing to unpack .../03-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 139s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 139s Selecting previously unselected package fonts-dejavu-mono. 139s Preparing to unpack .../04-fonts-dejavu-mono_2.37-8_all.deb ... 139s Unpacking fonts-dejavu-mono (2.37-8) ... 139s Selecting previously unselected package fonts-dejavu-core. 139s Preparing to unpack .../05-fonts-dejavu-core_2.37-8_all.deb ... 140s Unpacking fonts-dejavu-core (2.37-8) ... 140s Selecting previously unselected package fontconfig-config. 140s Preparing to unpack .../06-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 140s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 140s Selecting previously unselected package libfontconfig1:s390x. 140s Preparing to unpack .../07-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 140s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 140s Selecting previously unselected package libxrender1:s390x. 140s Preparing to unpack .../08-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 140s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 140s Selecting previously unselected package libxft2:s390x. 140s Preparing to unpack .../09-libxft2_2.3.6-1build1_s390x.deb ... 140s Unpacking libxft2:s390x (2.3.6-1build1) ... 140s Selecting previously unselected package x11-common. 140s Preparing to unpack .../10-x11-common_1%3a7.7+23ubuntu3_all.deb ... 140s Unpacking x11-common (1:7.7+23ubuntu3) ... 140s Selecting previously unselected package libxss1:s390x. 140s Preparing to unpack .../11-libxss1_1%3a1.2.3-1build3_s390x.deb ... 140s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 140s Selecting previously unselected package libtk8.6:s390x. 140s Preparing to unpack .../12-libtk8.6_8.6.15-1_s390x.deb ... 140s Unpacking libtk8.6:s390x (8.6.15-1) ... 140s Selecting previously unselected package tk8.6-blt2.5. 140s Preparing to unpack .../13-tk8.6-blt2.5_2.5.3+dfsg-7build1_s390x.deb ... 140s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 140s Selecting previously unselected package blt. 140s Preparing to unpack .../14-blt_2.5.3+dfsg-7build1_s390x.deb ... 140s Unpacking blt (2.5.3+dfsg-7build1) ... 140s Selecting previously unselected package fonts-lyx. 140s Preparing to unpack .../15-fonts-lyx_2.4.2.1-1_all.deb ... 140s Unpacking fonts-lyx (2.4.2.1-1) ... 140s Selecting previously unselected package libblas3:s390x. 140s Preparing to unpack .../16-libblas3_3.12.0-3build2_s390x.deb ... 140s Unpacking libblas3:s390x (3.12.0-3build2) ... 140s Selecting previously unselected package libdeflate0:s390x. 140s Preparing to unpack .../17-libdeflate0_1.22-1_s390x.deb ... 140s Unpacking libdeflate0:s390x (1.22-1) ... 140s Selecting previously unselected package libgfortran5:s390x. 140s Preparing to unpack .../18-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 140s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 140s Selecting previously unselected package libgomp1:s390x. 140s Preparing to unpack .../19-libgomp1_14.2.0-8ubuntu1_s390x.deb ... 140s Unpacking libgomp1:s390x (14.2.0-8ubuntu1) ... 140s Selecting previously unselected package libgraphite2-3:s390x. 140s Preparing to unpack .../20-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 140s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 140s Selecting previously unselected package libharfbuzz0b:s390x. 140s Preparing to unpack .../21-libharfbuzz0b_10.0.1-1_s390x.deb ... 140s Unpacking libharfbuzz0b:s390x (10.0.1-1) ... 140s Selecting previously unselected package libhwloc15:s390x. 140s Preparing to unpack .../22-libhwloc15_2.11.2-1_s390x.deb ... 140s Unpacking libhwloc15:s390x (2.11.2-1) ... 140s Selecting previously unselected package libimagequant0:s390x. 140s Preparing to unpack .../23-libimagequant0_2.18.0-1build1_s390x.deb ... 140s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 140s Selecting previously unselected package libjpeg-turbo8:s390x. 140s Preparing to unpack .../24-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ... 140s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 140s Selecting previously unselected package libjpeg8:s390x. 140s Preparing to unpack .../25-libjpeg8_8c-2ubuntu11_s390x.deb ... 140s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 140s Selecting previously unselected package libjs-jquery. 140s Preparing to unpack .../26-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 140s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 140s Selecting previously unselected package libjs-jquery-ui. 140s Preparing to unpack .../27-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 140s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 140s Selecting previously unselected package liblapack3:s390x. 140s Preparing to unpack .../28-liblapack3_3.12.0-3build2_s390x.deb ... 140s Unpacking liblapack3:s390x (3.12.0-3build2) ... 140s Selecting previously unselected package liblbfgsb0:s390x. 140s Preparing to unpack .../29-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 140s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 140s Selecting previously unselected package liblcms2-2:s390x. 140s Preparing to unpack .../30-liblcms2-2_2.16-2_s390x.deb ... 140s Unpacking liblcms2-2:s390x (2.16-2) ... 140s Selecting previously unselected package libpython3.13-stdlib:s390x. 140s Preparing to unpack .../31-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 140s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 140s Selecting previously unselected package libqhull-r8.0:s390x. 140s Preparing to unpack .../32-libqhull-r8.0_2020.2-6build1_s390x.deb ... 140s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 140s Selecting previously unselected package libraqm0:s390x. 140s Preparing to unpack .../33-libraqm0_0.10.1-1build1_s390x.deb ... 140s Unpacking libraqm0:s390x (0.10.1-1build1) ... 140s Selecting previously unselected package libsharpyuv0:s390x. 140s Preparing to unpack .../34-libsharpyuv0_1.4.0-0.1_s390x.deb ... 140s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 140s Selecting previously unselected package libtbbmalloc2:s390x. 140s Preparing to unpack .../35-libtbbmalloc2_2021.12.0-1ubuntu2_s390x.deb ... 140s Unpacking libtbbmalloc2:s390x (2021.12.0-1ubuntu2) ... 140s Selecting previously unselected package libtbbbind-2-5:s390x. 140s Preparing to unpack .../36-libtbbbind-2-5_2021.12.0-1ubuntu2_s390x.deb ... 140s Unpacking libtbbbind-2-5:s390x (2021.12.0-1ubuntu2) ... 140s Selecting previously unselected package libtbb12:s390x. 140s Preparing to unpack .../37-libtbb12_2021.12.0-1ubuntu2_s390x.deb ... 140s Unpacking libtbb12:s390x (2021.12.0-1ubuntu2) ... 140s Selecting previously unselected package libjbig0:s390x. 140s Preparing to unpack .../38-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 140s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 140s Selecting previously unselected package libwebp7:s390x. 140s Preparing to unpack .../39-libwebp7_1.4.0-0.1_s390x.deb ... 140s Unpacking libwebp7:s390x (1.4.0-0.1) ... 140s Selecting previously unselected package libtiff6:s390x. 140s Preparing to unpack .../40-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 140s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 140s Selecting previously unselected package libwebpdemux2:s390x. 140s Preparing to unpack .../41-libwebpdemux2_1.4.0-0.1_s390x.deb ... 140s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ... 140s Selecting previously unselected package libwebpmux3:s390x. 140s Preparing to unpack .../42-libwebpmux3_1.4.0-0.1_s390x.deb ... 140s Unpacking libwebpmux3:s390x (1.4.0-0.1) ... 140s Selecting previously unselected package libxslt1.1:s390x. 140s Preparing to unpack .../43-libxslt1.1_1.1.39-0exp1ubuntu1_s390x.deb ... 140s Unpacking libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ... 140s Selecting previously unselected package python-matplotlib-data. 140s Preparing to unpack .../44-python-matplotlib-data_3.8.3-3_all.deb ... 140s Unpacking python-matplotlib-data (3.8.3-3) ... 140s Selecting previously unselected package python3.13. 140s Preparing to unpack .../45-python3.13_3.13.0-2_s390x.deb ... 140s Unpacking python3.13 (3.13.0-2) ... 140s Selecting previously unselected package python3-all. 140s Preparing to unpack .../46-python3-all_3.12.7-1_s390x.deb ... 140s Unpacking python3-all (3.12.7-1) ... 140s Selecting previously unselected package python3-appdirs. 140s Preparing to unpack .../47-python3-appdirs_1.4.4-4_all.deb ... 140s Unpacking python3-appdirs (1.4.4-4) ... 140s Selecting previously unselected package python3-brotli. 140s Preparing to unpack .../48-python3-brotli_1.1.0-2build2_s390x.deb ... 140s Unpacking python3-brotli (1.1.0-2build2) ... 140s Selecting previously unselected package python3-numpy. 140s Preparing to unpack .../49-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 140s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 140s Selecting previously unselected package python3-contourpy. 140s Preparing to unpack .../50-python3-contourpy_1.3.0-2_s390x.deb ... 140s Unpacking python3-contourpy (1.3.0-2) ... 140s Selecting previously unselected package python3-cycler. 140s Preparing to unpack .../51-python3-cycler_0.12.1-1_all.deb ... 140s Unpacking python3-cycler (0.12.1-1) ... 140s Selecting previously unselected package python3-six. 140s Preparing to unpack .../52-python3-six_1.16.0-7_all.deb ... 140s Unpacking python3-six (1.16.0-7) ... 140s Selecting previously unselected package python3-dateutil. 140s Preparing to unpack .../53-python3-dateutil_2.9.0-2_all.deb ... 140s Unpacking python3-dateutil (2.9.0-2) ... 140s Selecting previously unselected package python3-decorator. 140s Preparing to unpack .../54-python3-decorator_5.1.1-5_all.deb ... 140s Unpacking python3-decorator (5.1.1-5) ... 140s Selecting previously unselected package python3-eagerpy. 140s Preparing to unpack .../55-python3-eagerpy_0.30.0-3_all.deb ... 140s Unpacking python3-eagerpy (0.30.0-3) ... 140s Selecting previously unselected package python3-scipy. 140s Preparing to unpack .../56-python3-scipy_1.13.1-5_s390x.deb ... 140s Unpacking python3-scipy (1.13.1-5) ... 141s Selecting previously unselected package python3-ufolib2. 141s Preparing to unpack .../57-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 141s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 141s Selecting previously unselected package python3-mpmath. 141s Preparing to unpack .../58-python3-mpmath_1.3.0-1_all.deb ... 141s Unpacking python3-mpmath (1.3.0-1) ... 141s Selecting previously unselected package python3-sympy. 141s Preparing to unpack .../59-python3-sympy_1.13.3-1_all.deb ... 141s Unpacking python3-sympy (1.13.3-1) ... 141s Selecting previously unselected package python3-tz. 141s Preparing to unpack .../60-python3-tz_2024.1-2_all.deb ... 141s Unpacking python3-tz (2024.1-2) ... 141s Selecting previously unselected package python3-fs. 141s Preparing to unpack .../61-python3-fs_2.4.16-4_all.deb ... 141s Unpacking python3-fs (2.4.16-4) ... 141s Selecting previously unselected package python3-lxml:s390x. 141s Preparing to unpack .../62-python3-lxml_5.3.0-1_s390x.deb ... 141s Unpacking python3-lxml:s390x (5.3.0-1) ... 141s Selecting previously unselected package python3-lz4. 141s Preparing to unpack .../63-python3-lz4_4.0.2+dfsg-1build4_s390x.deb ... 141s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 141s Selecting previously unselected package unicode-data. 141s Preparing to unpack .../64-unicode-data_15.1.0-1_all.deb ... 141s Unpacking unicode-data (15.1.0-1) ... 141s Selecting previously unselected package python3-fonttools. 141s Preparing to unpack .../65-python3-fonttools_4.46.0-1build2_s390x.deb ... 141s Unpacking python3-fonttools (4.46.0-1build2) ... 141s Selecting previously unselected package python3-gudhi. 141s Preparing to unpack .../66-python3-gudhi_3.10.1+dfsg-1_s390x.deb ... 141s Unpacking python3-gudhi (3.10.1+dfsg-1) ... 141s Selecting previously unselected package python3-iniconfig. 141s Preparing to unpack .../67-python3-iniconfig_1.1.1-2_all.deb ... 141s Unpacking python3-iniconfig (1.1.1-2) ... 141s Selecting previously unselected package python3-joblib. 141s Preparing to unpack .../68-python3-joblib_1.3.2-5_all.deb ... 141s Unpacking python3-joblib (1.3.2-5) ... 141s Selecting previously unselected package python3-kiwisolver. 141s Preparing to unpack .../69-python3-kiwisolver_1.4.7-2_s390x.deb ... 141s Unpacking python3-kiwisolver (1.4.7-2) ... 141s Selecting previously unselected package libopenjp2-7:s390x. 141s Preparing to unpack .../70-libopenjp2-7_2.5.0-2ubuntu1_s390x.deb ... 141s Unpacking libopenjp2-7:s390x (2.5.0-2ubuntu1) ... 141s Selecting previously unselected package python3-pil:s390x. 141s Preparing to unpack .../71-python3-pil_10.4.0-1ubuntu1_s390x.deb ... 141s Unpacking python3-pil:s390x (10.4.0-1ubuntu1) ... 141s Selecting previously unselected package python3.12-tk. 141s Preparing to unpack .../72-python3.12-tk_3.12.7-3_s390x.deb ... 141s Unpacking python3.12-tk (3.12.7-3) ... 141s Selecting previously unselected package python3.13-tk. 141s Preparing to unpack .../73-python3.13-tk_3.13.0-2_s390x.deb ... 141s Unpacking python3.13-tk (3.13.0-2) ... 141s Selecting previously unselected package python3-tk:s390x. 141s Preparing to unpack .../74-python3-tk_3.12.7-1_s390x.deb ... 141s Unpacking python3-tk:s390x (3.12.7-1) ... 141s Selecting previously unselected package python3-pil.imagetk:s390x. 142s Preparing to unpack .../75-python3-pil.imagetk_10.4.0-1ubuntu1_s390x.deb ... 142s Unpacking python3-pil.imagetk:s390x (10.4.0-1ubuntu1) ... 142s Selecting previously unselected package python3-packaging. 142s Preparing to unpack .../76-python3-packaging_24.1-1_all.deb ... 142s Unpacking python3-packaging (24.1-1) ... 142s Selecting previously unselected package python3-matplotlib. 142s Preparing to unpack .../77-python3-matplotlib_3.8.3-3_s390x.deb ... 142s Unpacking python3-matplotlib (3.8.3-3) ... 142s Selecting previously unselected package python3-pluggy. 142s Preparing to unpack .../78-python3-pluggy_1.5.0-1_all.deb ... 142s Unpacking python3-pluggy (1.5.0-1) ... 142s Selecting previously unselected package python3-pot. 142s Preparing to unpack .../79-python3-pot_0.9.4+dfsg-1_s390x.deb ... 142s Unpacking python3-pot (0.9.4+dfsg-1) ... 142s Selecting previously unselected package python3-pytest. 142s Preparing to unpack .../80-python3-pytest_8.3.3-1_all.deb ... 142s Unpacking python3-pytest (8.3.3-1) ... 142s Selecting previously unselected package python3-threadpoolctl. 142s Preparing to unpack .../81-python3-threadpoolctl_3.1.0-1_all.deb ... 142s Unpacking python3-threadpoolctl (3.1.0-1) ... 142s Selecting previously unselected package python3-sklearn-lib:s390x. 142s Preparing to unpack .../82-python3-sklearn-lib_1.4.2+dfsg-6_s390x.deb ... 142s Unpacking python3-sklearn-lib:s390x (1.4.2+dfsg-6) ... 142s Selecting previously unselected package python3-sklearn. 142s Preparing to unpack .../83-python3-sklearn_1.4.2+dfsg-6_all.deb ... 142s Unpacking python3-sklearn (1.4.2+dfsg-6) ... 142s Selecting previously unselected package autopkgtest-satdep. 142s Preparing to unpack .../84-1-autopkgtest-satdep.deb ... 142s Unpacking autopkgtest-satdep (0) ... 142s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 142s Setting up liblcms2-2:s390x (2.16-2) ... 142s Setting up python3-iniconfig (1.1.1-2) ... 142s Setting up libtbbmalloc2:s390x (2021.12.0-1ubuntu2) ... 142s Setting up libsharpyuv0:s390x (1.4.0-0.1) ... 142s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 142s Setting up python3-joblib (1.3.2-5) ... 143s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 143s Setting up fonts-lyx (2.4.2.1-1) ... 143s Setting up python3-threadpoolctl (3.1.0-1) ... 143s Setting up x11-common (1:7.7+23ubuntu3) ... 143s Setting up libdeflate0:s390x (1.22-1) ... 143s Setting up libqhull-r8.0:s390x (2020.2-6build1) ... 143s Setting up libgomp1:s390x (14.2.0-8ubuntu1) ... 143s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 143s Setting up python3-tz (2024.1-2) ... 143s Setting up unicode-data (15.1.0-1) ... 143s Setting up python3-six (1.16.0-7) ... 143s Setting up libpython3.13-minimal:s390x (3.13.0-2) ... 143s Setting up python3-decorator (5.1.1-5) ... 144s Setting up libblas3:s390x (3.12.0-3build2) ... 144s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 144s Setting up python3-packaging (24.1-1) ... 144s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 144s Setting up python3-brotli (1.1.0-2build2) ... 144s Setting up python3-cycler (0.12.1-1) ... 144s Setting up libimagequant0:s390x (2.18.0-1build1) ... 144s Setting up fonts-dejavu-mono (2.37-8) ... 144s Setting up python3-kiwisolver (1.4.7-2) ... 144s Setting up libhwloc15:s390x (2.11.2-1) ... 144s Setting up libtcl8.6:s390x (8.6.15+dfsg-2) ... 144s Setting up fonts-dejavu-core (2.37-8) ... 144s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 144s Setting up libgfortran5:s390x (14.2.0-8ubuntu1) ... 144s Setting up python3-pluggy (1.5.0-1) ... 144s Setting up libwebp7:s390x (1.4.0-0.1) ... 144s Setting up libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ... 144s Setting up libopenjp2-7:s390x (2.5.0-2ubuntu1) ... 144s Setting up python3.13-minimal (3.13.0-2) ... 145s Setting up libharfbuzz0b:s390x (10.0.1-1) ... 145s Setting up python3-dateutil (2.9.0-2) ... 146s Setting up libxss1:s390x (1:1.2.3-1build3) ... 146s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 146s Setting up python3-mpmath (1.3.0-1) ... 147s Setting up python-matplotlib-data (3.8.3-3) ... 147s Setting up libwebpmux3:s390x (1.4.0-0.1) ... 147s Setting up python3-appdirs (1.4.4-4) ... 147s Setting up libpython3.13-stdlib:s390x (3.13.0-2) ... 147s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 147s Setting up python3-sympy (1.13.3-1) ... 162s Setting up liblapack3:s390x (3.12.0-3build2) ... 162s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 162s Setting up python3.13 (3.13.0-2) ... 163s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 163s Setting up python3-pytest (8.3.3-1) ... 164s Setting up libwebpdemux2:s390x (1.4.0-0.1) ... 164s Setting up python3-all (3.12.7-1) ... 164s Setting up libtbbbind-2-5:s390x (2021.12.0-1ubuntu2) ... 164s Setting up python3-fs (2.4.16-4) ... 164s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 164s Setting up libraqm0:s390x (0.10.1-1build1) ... 165s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 169s Setting up python3-lxml:s390x (5.3.0-1) ... 169s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 169s Setting up python3-contourpy (1.3.0-2) ... 170s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 170s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 170s Setting up libxft2:s390x (2.3.6-1build1) ... 170s Setting up python3-scipy (1.13.1-5) ... 178s Setting up python3-pot (0.9.4+dfsg-1) ... 178s Setting up libtk8.6:s390x (8.6.15-1) ... 178s Setting up python3.12-tk (3.12.7-3) ... 178s Setting up python3-sklearn-lib:s390x (1.4.2+dfsg-6) ... 178s Setting up libtbb12:s390x (2021.12.0-1ubuntu2) ... 178s Setting up python3.13-tk (3.13.0-2) ... 179s Setting up python3-pil:s390x (10.4.0-1ubuntu1) ... 179s Setting up python3-eagerpy (0.30.0-3) ... 179s Setting up python3-sklearn (1.4.2+dfsg-6) ... 185s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 185s Setting up blt (2.5.3+dfsg-7build1) ... 185s Setting up python3-tk:s390x (3.12.7-1) ... 185s Setting up python3-gudhi (3.10.1+dfsg-1) ... 185s Setting up python3-pil.imagetk:s390x (10.4.0-1ubuntu1) ... 185s Setting up python3-fonttools (4.46.0-1build2) ... 187s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 187s Setting up python3-matplotlib (3.8.3-3) ... 191s Setting up autopkgtest-satdep (0) ... 191s Processing triggers for libc-bin (2.40-1ubuntu3) ... 191s Processing triggers for systemd (256.5-2ubuntu4) ... 191s Processing triggers for man-db (2.12.1-3) ... 195s (Reading database ... 64609 files and directories currently installed.) 195s Removing autopkgtest-satdep (0) ... 196s autopkgtest [11:29:03]: test python-upstream.sh: [----------------------- 196s Running tests with Python 3.13. 197s Blacklist: ['test_knn.py', 'test_representations.py', 'test_wasserstein_distance.py::test_wasserstein_distance_grad', 'test_remote_datasets.py'] 197s Ignorelist: ['test_diff.py', 'test_dtm.py', 'test_perslay.py', 'test_wasserstein_with_tensors.py'] 197s ============================= test session starts ============================== 197s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 197s rootdir: /tmp/autopkgtest.0jMDrr/autopkgtest_tmp 197s plugins: typeguard-4.4.1 197s collected 4 items / 29 errors 197s 197s ==================================== ERRORS ==================================== 197s _________________ ERROR collecting test/test_alpha_complex.py __________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_alpha_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_alpha_complex.py:11: in 197s from gudhi import AlphaComplex 197s E ImportError: cannot import name 'AlphaComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s __________ ERROR collecting test/test_betti_curve_representations.py ___________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_betti_curve_representations.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_betti_curve_representations.py:1: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ______________ ERROR collecting test/test_bottleneck_distance.py _______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_bottleneck_distance.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_bottleneck_distance.py:12: in 197s import gudhi.hera 197s /usr/lib/python3/dist-packages/gudhi/hera/__init__.py:1: in 197s from .wasserstein import wasserstein_distance 197s E ModuleNotFoundError: No module named 'gudhi.hera.wasserstein' 197s _________________ ERROR collecting test/test_collapse_edges.py _________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_collapse_edges.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_collapse_edges.py:11: in 197s from gudhi.flag_filtration.edge_collapse import reduce_graph as collapse_edges 197s /usr/lib/python3/dist-packages/gudhi/flag_filtration/edge_collapse.py:10: in 197s from .._edge_collapse import _collapse_edges 197s E ModuleNotFoundError: No module named 'gudhi._edge_collapse' 197s _________________ ERROR collecting test/test_cover_complex.py __________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_cover_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_cover_complex.py:11: in 197s from gudhi import CoverComplex 197s E ImportError: cannot import name 'CoverComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ________________ ERROR collecting test/test_cubical_complex.py _________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_cubical_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_cubical_complex.py:11: in 197s from gudhi import CubicalComplex, PeriodicCubicalComplex 197s E ImportError: cannot import name 'CubicalComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ______________ ERROR collecting test/test_datasets_generators.py _______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_datasets_generators.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_datasets_generators.py:11: in 197s from gudhi.datasets.generators import points 197s /usr/lib/python3/dist-packages/gudhi/datasets/generators/points.py:10: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ________________ ERROR collecting test/test_dtm_rips_complex.py ________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_dtm_rips_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_dtm_rips_complex.py:11: in 197s from gudhi.dtm_rips_complex import DTMRipsComplex 197s /usr/lib/python3/dist-packages/gudhi/dtm_rips_complex.py:11: in 197s from gudhi.weighted_rips_complex import WeightedRipsComplex 197s /usr/lib/python3/dist-packages/gudhi/weighted_rips_complex.py:10: in 197s from gudhi import SimplexTree 197s E ImportError: cannot import name 'SimplexTree' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ______________________ ERROR collecting test/test_knn.py _______________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_knn.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_knn.py:11: in 197s from gudhi.point_cloud.knn import KNearestNeighbors 197s /usr/lib/python3/dist-packages/gudhi/point_cloud/knn.py:10: in 197s import numpy 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ______________________ ERROR collecting test/test_off.py _______________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_off.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_off.py:12: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s __________ ERROR collecting test/test_persistence_graphical_tools.py ___________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_persistence_graphical_tools.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_persistence_graphical_tools.py:12: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s __________________ ERROR collecting test/test_reader_utils.py __________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_reader_utils.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_reader_utils.py:12: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ________________ ERROR collecting test/test_remote_datasets.py _________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_remote_datasets.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_remote_datasets.py:12: in 197s from gudhi.datasets import remote 197s /usr/lib/python3/dist-packages/gudhi/datasets/remote.py:20: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ________________ ERROR collecting test/test_representations.py _________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_representations.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_representations.py:3: in 197s import matplotlib.pyplot as plt 197s /usr/lib/python3/dist-packages/matplotlib/__init__.py:156: in 197s import numpy 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s _________ ERROR collecting test/test_representations_preprocessing.py __________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_representations_preprocessing.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_representations_preprocessing.py:11: in 197s from gudhi.representations.preprocessing import DimensionSelector 197s /usr/lib/python3/dist-packages/gudhi/representations/__init__.py:1: in 197s from .kernel_methods import * 197s /usr/lib/python3/dist-packages/gudhi/representations/kernel_methods.py:10: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s __________________ ERROR collecting test/test_rips_complex.py __________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_rips_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_rips_complex.py:11: in 197s from gudhi import RipsComplex 197s E ImportError: cannot import name 'RipsComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s _______________ ERROR collecting test/test_simplex_generators.py _______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_simplex_generators.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_simplex_generators.py:12: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s __________________ ERROR collecting test/test_simplex_tree.py __________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_simplex_tree.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_simplex_tree.py:11: in 197s from gudhi import SimplexTree 197s E ImportError: cannot import name 'SimplexTree' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ___________ ERROR collecting test/test_simplex_tree_serialization.py ___________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_simplex_tree_serialization.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_simplex_tree_serialization.py:11: in 197s from gudhi import SimplexTree 197s E ImportError: cannot import name 'SimplexTree' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s __________ ERROR collecting test/test_sklearn_cubical_persistence.py ___________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_sklearn_cubical_persistence.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_sklearn_cubical_persistence.py:11: in 197s from gudhi.sklearn.cubical_persistence import CubicalPersistence 197s /usr/lib/python3/dist-packages/gudhi/sklearn/cubical_persistence.py:10: in 197s from .. import CubicalComplex 197s E ImportError: cannot import name 'CubicalComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ____________ ERROR collecting test/test_sklearn_rips_persistence.py ____________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_sklearn_rips_persistence.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_sklearn_rips_persistence.py:11: in 197s from gudhi.datasets.generators import points 197s /usr/lib/python3/dist-packages/gudhi/datasets/generators/points.py:10: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s __________________ ERROR collecting test/test_subsampling.py ___________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_subsampling.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_subsampling.py:13: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s _______________ ERROR collecting test/test_tangential_complex.py _______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_tangential_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_tangential_complex.py:11: in 197s from gudhi import TangentialComplex, SimplexTree 197s E ImportError: cannot import name 'TangentialComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ___________________ ERROR collecting test/test_time_delay.py ___________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_time_delay.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_time_delay.py:1: in 197s from gudhi.point_cloud.timedelay import TimeDelayEmbedding 197s /usr/lib/python3/dist-packages/gudhi/point_cloud/timedelay.py:9: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s _____________________ ERROR collecting test/test_tomato.py _____________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_tomato.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_tomato.py:11: in 197s from gudhi.clustering.tomato import Tomato 197s /usr/lib/python3/dist-packages/gudhi/clustering/tomato.py:10: in 197s import numpy 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s _____________ ERROR collecting test/test_wasserstein_barycenter.py _____________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_wasserstein_barycenter.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_wasserstein_barycenter.py:1: in 197s from gudhi.wasserstein.barycenter import lagrangian_barycenter 197s /usr/lib/python3/dist-packages/gudhi/wasserstein/__init__.py:1: in 197s from .wasserstein import wasserstein_distance 197s /usr/lib/python3/dist-packages/gudhi/wasserstein/wasserstein.py:10: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s ______________ ERROR collecting test/test_wasserstein_distance.py ______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_wasserstein_distance.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 197s from . import multiarray 197s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 197s from . import overrides 197s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 197s from numpy.core._multiarray_umath import ( 197s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 197s 197s During handling of the above exception, another exception occurred: 197s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 197s from numpy.__config__ import show as show_config 197s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 197s from numpy.core._multiarray_umath import ( 197s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 197s raise ImportError(msg) 197s E ImportError: 197s E 197s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 197s E 197s E Importing the numpy C-extensions failed. This error can happen for 197s E many reasons, often due to issues with your setup or how NumPy was 197s E installed. 197s E 197s E We have compiled some common reasons and troubleshooting tips at: 197s E 197s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 197s E 197s E Please note and check the following: 197s E 197s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 197s E * The NumPy version is: "1.26.4" 197s E 197s E and make sure that they are the versions you expect. 197s E Please carefully study the documentation linked above for further help. 197s E 197s E Original error was: No module named 'numpy.core._multiarray_umath' 197s 197s The above exception was the direct cause of the following exception: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_wasserstein_distance.py:12: in 197s from gudhi.wasserstein.wasserstein import _proj_on_diag, _finite_part, _handle_essential_parts, _get_essential_parts 197s /usr/lib/python3/dist-packages/gudhi/wasserstein/__init__.py:1: in 197s from .wasserstein import wasserstein_distance 197s /usr/lib/python3/dist-packages/gudhi/wasserstein/wasserstein.py:10: in 197s import numpy as np 197s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 197s raise ImportError(msg) from e 197s E ImportError: Error importing numpy: you should not try to import numpy from 197s E its source directory; please exit the numpy source tree, and relaunch 197s E your python interpreter from there. 197s _____________ ERROR collecting test/test_weighted_rips_complex.py ______________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_weighted_rips_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_weighted_rips_complex.py:11: in 197s from gudhi.weighted_rips_complex import WeightedRipsComplex 197s /usr/lib/python3/dist-packages/gudhi/weighted_rips_complex.py:10: in 197s from gudhi import SimplexTree 197s E ImportError: cannot import name 'SimplexTree' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s ________________ ERROR collecting test/test_witness_complex.py _________________ 197s ImportError while importing test module '/tmp/autopkgtest.0jMDrr/autopkgtest_tmp/test/test_witness_complex.py'. 197s Hint: make sure your test modules/packages have valid Python names. 197s Traceback: 197s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 197s return _bootstrap._gcd_import(name[level:], package, level) 197s test/test_witness_complex.py:11: in 197s from gudhi import WitnessComplex, StrongWitnessComplex, SimplexTree 197s E ImportError: cannot import name 'WitnessComplex' from 'gudhi' (/usr/lib/python3/dist-packages/gudhi/__init__.py) 197s =========================== short test summary info ============================ 197s ERROR test/test_alpha_complex.py 197s ERROR test/test_betti_curve_representations.py 197s ERROR test/test_bottleneck_distance.py 197s ERROR test/test_collapse_edges.py 197s ERROR test/test_cover_complex.py 197s ERROR test/test_cubical_complex.py 197s ERROR test/test_datasets_generators.py 197s ERROR test/test_dtm_rips_complex.py 197s ERROR test/test_knn.py 197s ERROR test/test_off.py 197s ERROR test/test_persistence_graphical_tools.py 197s ERROR test/test_reader_utils.py 197s ERROR test/test_remote_datasets.py 197s ERROR test/test_representations.py 197s ERROR test/test_representations_preprocessing.py 197s ERROR test/test_rips_complex.py 197s ERROR test/test_simplex_generators.py 197s ERROR test/test_simplex_tree.py 197s ERROR test/test_simplex_tree_serialization.py 197s ERROR test/test_sklearn_cubical_persistence.py 197s ERROR test/test_sklearn_rips_persistence.py 197s ERROR test/test_subsampling.py 197s ERROR test/test_tangential_complex.py 197s ERROR test/test_time_delay.py 197s ERROR test/test_tomato.py 197s ERROR test/test_wasserstein_barycenter.py 197s ERROR test/test_wasserstein_distance.py 197s ERROR test/test_weighted_rips_complex.py 197s ERROR test/test_witness_complex.py 197s !!!!!!!!!!!!!!!!!!! Interrupted: 29 errors during collection !!!!!!!!!!!!!!!!!!! 197s ============================== 29 errors in 1.04s ============================== 198s autopkgtest [11:29:05]: test python-upstream.sh: -----------------------] 198s autopkgtest [11:29:05]: test python-upstream.sh: - - - - - - - - - - results - - - - - - - - - - 198s python-upstream.sh FAIL non-zero exit status 2 199s autopkgtest [11:29:06]: @@@@@@@@@@@@@@@@@@@@ summary 199s python-upstream.sh FAIL non-zero exit status 2 210s nova [W] Using flock in prodstack6-s390x 210s flock: timeout while waiting to get lock 210s Creating nova instance adt-plucky-s390x-gudhi-20241113-112547-juju-7f2275-prod-proposed-migration-environment-15-e74f2eab-0b8a-4e12-a436-af5df901d9e8 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)...