0s autopkgtest [10:42:20]: starting date and time: 2024-11-13 10:42:20+0000 0s autopkgtest [10:42:20]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [10:42:20]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.d53u3ll9/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade custodian --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-5.secgroup --name adt-plucky-s390x-custodian-20241113-104219-juju-7f2275-prod-proposed-migration-environment-20-a1c31f9a-66af-4366-a003-49a64ee38f94 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 127s autopkgtest [10:44:27]: testbed dpkg architecture: s390x 127s autopkgtest [10:44:27]: testbed apt version: 2.9.8 127s autopkgtest [10:44:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 129s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 129s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 129s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.4 kB] 129s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [849 kB] 129s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB] 129s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [85.8 kB] 129s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [565 kB] 129s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [16.6 kB] 129s Fetched 1689 kB in 1s (2128 kB/s) 129s Reading package lists... 131s Reading package lists... 131s Building dependency tree... 131s Reading state information... 131s Calculating upgrade... 132s The following NEW packages will be installed: 132s python3.13-gdbm 132s The following packages will be upgraded: 132s libgpgme11t64 libpython3-stdlib python3 python3-gdbm python3-minimal 132s 5 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 132s Need to get 252 kB of archives. 132s After this operation, 98.3 kB of additional disk space will be used. 132s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-minimal s390x 3.12.7-1 [27.4 kB] 132s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3 s390x 3.12.7-1 [24.0 kB] 132s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libpython3-stdlib s390x 3.12.7-1 [10.0 kB] 132s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-gdbm s390x 3.13.0-2 [31.0 kB] 132s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-gdbm s390x 3.12.7-1 [8642 B] 132s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgme11t64 s390x 1.23.2-5ubuntu4 [151 kB] 132s Fetched 252 kB in 0s (541 kB/s) 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 132s Preparing to unpack .../python3-minimal_3.12.7-1_s390x.deb ... 132s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 132s Setting up python3-minimal (3.12.7-1) ... 133s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55510 files and directories currently installed.) 133s Preparing to unpack .../python3_3.12.7-1_s390x.deb ... 133s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 133s Preparing to unpack .../libpython3-stdlib_3.12.7-1_s390x.deb ... 133s Unpacking libpython3-stdlib:s390x (3.12.7-1) over (3.12.6-0ubuntu1) ... 133s Selecting previously unselected package python3.13-gdbm. 133s Preparing to unpack .../python3.13-gdbm_3.13.0-2_s390x.deb ... 133s Unpacking python3.13-gdbm (3.13.0-2) ... 133s Preparing to unpack .../python3-gdbm_3.12.7-1_s390x.deb ... 133s Unpacking python3-gdbm:s390x (3.12.7-1) over (3.12.6-1ubuntu1) ... 133s Preparing to unpack .../libgpgme11t64_1.23.2-5ubuntu4_s390x.deb ... 133s Unpacking libgpgme11t64:s390x (1.23.2-5ubuntu4) over (1.18.0-4.1ubuntu4) ... 133s Setting up libgpgme11t64:s390x (1.23.2-5ubuntu4) ... 133s Setting up python3.13-gdbm (3.13.0-2) ... 133s Setting up libpython3-stdlib:s390x (3.12.7-1) ... 133s Setting up python3 (3.12.7-1) ... 133s Setting up python3-gdbm:s390x (3.12.7-1) ... 133s Processing triggers for man-db (2.12.1-3) ... 133s Processing triggers for libc-bin (2.40-1ubuntu3) ... 133s Reading package lists... 134s Building dependency tree... 134s Reading state information... 134s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 134s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 134s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 134s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 134s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 135s Reading package lists... 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s Calculating upgrade... 135s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 135s Reading package lists... 136s Building dependency tree... 136s Reading state information... 136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s autopkgtest [10:44:39]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 139s autopkgtest [10:44:39]: @@@@@@@@@@@@@@@@@@@@ apt-source custodian 146s Get:1 http://ftpmaster.internal/ubuntu plucky/universe custodian 2024.6.24-1 (dsc) [2322 B] 146s Get:2 http://ftpmaster.internal/ubuntu plucky/universe custodian 2024.6.24-1 (tar) [46.6 MB] 146s Get:3 http://ftpmaster.internal/ubuntu plucky/universe custodian 2024.6.24-1 (diff) [8232 B] 146s gpgv: Signature made Mon Aug 5 23:32:47 2024 UTC 146s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 146s gpgv: Can't check signature: No public key 146s dpkg-source: warning: cannot verify inline signature for ./custodian_2024.6.24-1.dsc: no acceptable signature found 147s autopkgtest [10:44:47]: testing package custodian version 2024.6.24-1 148s autopkgtest [10:44:48]: build not needed 167s autopkgtest [10:45:07]: test test-custodian: preparing testbed 173s Reading package lists... 173s Building dependency tree... 173s Reading state information... 173s Starting pkgProblemResolver with broken count: 0 173s Starting 2 pkgProblemResolver with broken count: 0 173s Done 173s The following additional packages will be installed: 173s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libblas3 173s libdeflate0 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 173s libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 173s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 libopenjp2-7 173s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0 173s libsharpyuv0 libsymspg2 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 173s libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 python-matplotlib-data 173s python3-all python3-annotated-types python3-appdirs python3-brotli 173s python3-bson python3-contourpy python3-custodian python3-cycler 173s python3-dateutil python3-decorator python3-dnspython python3-email-validator 173s python3-fastjsonschema python3-fonttools python3-fs python3-iniconfig 173s python3-joblib python3-jupyter-core python3-kiwisolver python3-latexcodec 173s python3-lxml python3-lz4 python3-matplotlib python3-monty python3-mpmath 173s python3-nbformat python3-networkx python3-numpy python3-packaging 173s python3-palettable python3-pandas python3-pandas-lib python3-pil 173s python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy 173s python3-psutil python3-pybtex python3-pydantic python3-pydantic-core 173s python3-pymatgen python3-pytest python3-ruamel.yaml python3-ruamel.yaml.clib 173s python3-scipy python3-six python3-spglib python3-sympy python3-tabulate 173s python3-tenacity python3-tk python3-tqdm python3-traitlets python3-tz 173s python3-ufolib2 python3-uncertainties python3-unicodedata2 python3.12-tk 173s python3.13 python3.13-minimal python3.13-tk tk8.6-blt2.5 unicode-data 173s x11-common 173s Suggested packages: 173s blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 173s python-custodian-doc python-cycler-doc python3-trio python3-aioquic 173s python3-h2 python3-httpx python3-httpcore python-fastjsonschema-doc 173s python-joblib-doc python3-pip python-latexcodec-doc python-lxml-doc 173s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 173s inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi 173s python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado 173s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 173s python3-gdal python3-pydot python3-pygraphviz gcc gfortran python-numpy-doc 173s python3-dev python-pandas-doc python3-statsmodels python-pil-doc 173s python3-ipykernel python-pybtex-doc python-pymatgen-doc python3-mp-api 173s python-scipy-doc texlive-fonts-extra python-sympy-doc python-tenacity-doc 173s tix python3-tk-dbg python-traitlets-doc python-uncertainties-doc 173s python3.13-venv python3.13-doc binfmt-support 173s Recommended packages: 173s javascript-common python3-bson-ext python3-simplejson python3-bs4 173s python3-cssselect python3-html5lib python-monty-doc python3-torch 173s python3-bottleneck python3-numexpr python3-odf python3-openpyxl 173s python3-tables python3-olefile python3-openbabel python3-ase g++ 173s | c++-compiler isympy-common 173s The following NEW packages will be installed: 173s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 173s fonts-lyx libblas3 libdeflate0 libfontconfig1 libfreetype6 libgfortran5 173s libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 173s libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 173s libopenjp2-7 libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 173s libraqm0 libsharpyuv0 libsymspg2 libtcl8.6 libtiff6 libtk8.6 libwebp7 173s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 173s python-matplotlib-data python3-all python3-annotated-types python3-appdirs 173s python3-brotli python3-bson python3-contourpy python3-custodian 173s python3-cycler python3-dateutil python3-decorator python3-dnspython 173s python3-email-validator python3-fastjsonschema python3-fonttools python3-fs 173s python3-iniconfig python3-joblib python3-jupyter-core python3-kiwisolver 173s python3-latexcodec python3-lxml python3-lz4 python3-matplotlib python3-monty 173s python3-mpmath python3-nbformat python3-networkx python3-numpy 173s python3-packaging python3-palettable python3-pandas python3-pandas-lib 173s python3-pil python3-pil.imagetk python3-platformdirs python3-plotly 173s python3-pluggy python3-psutil python3-pybtex python3-pydantic 173s python3-pydantic-core python3-pymatgen python3-pytest python3-ruamel.yaml 173s python3-ruamel.yaml.clib python3-scipy python3-six python3-spglib 173s python3-sympy python3-tabulate python3-tenacity python3-tk python3-tqdm 173s python3-traitlets python3-tz python3-ufolib2 python3-uncertainties 173s python3-unicodedata2 python3.12-tk python3.13 python3.13-minimal 173s python3.13-tk tk8.6-blt2.5 unicode-data x11-common 173s 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded. 173s Need to get 94.0 MB/94.0 MB of archives. 173s After this operation, 467 MB of additional disk space will be used. 173s Get:1 /tmp/autopkgtest.XmTSfM/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B] 173s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-minimal s390x 3.13.0-2 [877 kB] 174s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-minimal s390x 3.13.0-2 [2172 kB] 174s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.15+dfsg-2 [1034 kB] 174s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 174s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 174s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 174s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 174s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 174s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 174s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 174s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 174s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 174s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.15-1 [828 kB] 175s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-7build1 [662 kB] 175s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x blt s390x 2.5.3+dfsg-7build1 [4840 B] 175s Get:17 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lyx all 2.4.2.1-1 [171 kB] 175s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 175s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.22-1 [46.1 kB] 175s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-8ubuntu1 [587 kB] 175s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-8ubuntu1 [151 kB] 175s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 175s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.0.1-1 [536 kB] 175s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 175s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB] 175s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 175s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 175s Get:28 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 175s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 175s Get:30 http://ftpmaster.internal/ubuntu plucky/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1build1 [32.4 kB] 175s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 175s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libpython3.13-stdlib s390x 3.13.0-2 [2086 kB] 175s Get:33 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 175s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libraqm0 s390x 0.10.1-1build1 [16.2 kB] 175s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 175s Get:36 http://ftpmaster.internal/ubuntu plucky/universe s390x libsymspg2 s390x 2.4.0-1ubuntu1 [215 kB] 175s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 175s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 175s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 175s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpdemux2 s390x 1.4.0-0.1 [12.2 kB] 175s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libwebpmux3 s390x 1.4.0-0.1 [25.3 kB] 175s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libxslt1.1 s390x 1.1.39-0exp1ubuntu1 [169 kB] 175s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x python-matplotlib-data all 3.8.3-3 [2928 kB] 175s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13 s390x 3.13.0-2 [719 kB] 175s Get:45 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-all s390x 3.12.7-1 [890 B] 175s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-annotated-types all 0.7.0-1 [19.4 kB] 175s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x python3-appdirs all 1.4.4-4 [10.9 kB] 175s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-brotli s390x 1.1.0-2build2 [376 kB] 175s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x python3-bson all 4.7.3-2ubuntu1 [41.1 kB] 175s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x python3-numpy s390x 1:1.26.4+ds-11build1 [4113 kB] 176s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-contourpy s390x 1.3.0-2 [195 kB] 176s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x python3-six all 1.16.0-7 [13.1 kB] 176s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dateutil all 2.9.0-2 [80.3 kB] 176s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tz all 2024.1-2 [31.4 kB] 176s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas-lib s390x 2.2.3+dfsg-5 [4938 kB] 176s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pandas all 2.2.3+dfsg-5 [3112 kB] 176s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pydantic-core s390x 2.23.4-2 [2016 kB] 176s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x python3-dnspython all 2.6.1-1ubuntu1 [163 kB] 176s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-email-validator all 2.2.0-1 [28.5 kB] 176s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pydantic s390x 2.9.1-1 [290 kB] 176s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-tqdm all 4.67.0-1 [91.6 kB] 176s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-monty all 2024.7.29-1 [38.0 kB] 176s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x python3-psutil s390x 5.9.8-2build2 [195 kB] 176s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ruamel.yaml.clib s390x 0.2.8+ds-2 [143 kB] 176s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ruamel.yaml all 0.18.6+ds-3 [126 kB] 176s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-custodian all 2024.6.24-1 [90.2 kB] 176s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-cycler all 0.12.1-1 [9716 B] 176s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 176s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fastjsonschema all 2.20.0-1 [20.1 kB] 176s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-scipy s390x 1.13.1-5 [17.5 MB] 177s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 177s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 177s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-sympy all 1.13.3-1 [4228 kB] 177s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fs all 2.4.16-4 [91.3 kB] 177s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lxml s390x 5.3.0-1 [1314 kB] 177s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-lz4 s390x 4.0.2+dfsg-1build4 [26.4 kB] 177s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-unicodedata2 s390x 15.1.0+ds-1build1 [367 kB] 177s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x unicode-data all 15.1.0-1 [8878 kB] 177s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-fonttools s390x 4.46.0-1build2 [1453 kB] 177s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 177s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-joblib all 1.3.2-5 [206 kB] 177s Get:82 http://ftpmaster.internal/ubuntu plucky/main s390x python3-platformdirs all 4.3.6-1 [16.8 kB] 177s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 177s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-jupyter-core all 5.7.2-4 [28.0 kB] 177s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-kiwisolver s390x 1.4.7-2 [54.9 kB] 177s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-latexcodec all 3.0.0-1 [16.6 kB] 177s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu1 [208 kB] 177s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x python3-pil s390x 10.4.0-1ubuntu1 [492 kB] 177s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x python3.12-tk s390x 3.12.7-3 [117 kB] 177s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x python3.13-tk s390x 3.13.0-2 [107 kB] 177s Get:91 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x python3-tk s390x 3.12.7-1 [9750 B] 177s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pil.imagetk s390x 10.4.0-1ubuntu1 [9314 B] 177s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x python3-packaging all 24.1-1 [41.4 kB] 177s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-matplotlib s390x 3.8.3-3 [4554 kB] 177s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-nbformat all 5.9.1-1 [41.2 kB] 177s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 178s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-palettable all 3.3.3-1 [81.3 kB] 178s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB] 178s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-plotly all 5.20.0+dfsg-1 [2766 kB] 178s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pluggy all 1.5.0-1 [21.0 kB] 178s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pybtex all 0.24.0-4 [70.0 kB] 178s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-spglib s390x 2.4.0-1ubuntu1 [29.8 kB] 178s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x python3-tabulate all 0.9.0-1 [45.3 kB] 178s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-uncertainties all 3.2.2-1 [51.4 kB] 178s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pymatgen s390x 2024.6.10+dfsg1-8 [2506 kB] 179s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x python3-pytest all 8.3.3-1 [251 kB] 180s Fetched 94.0 MB in 6s (15.9 MB/s) 180s Selecting previously unselected package libpython3.13-minimal:s390x. 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55517 files and directories currently installed.) 180s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_s390x.deb ... 180s Unpacking libpython3.13-minimal:s390x (3.13.0-2) ... 180s Selecting previously unselected package python3.13-minimal. 180s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_s390x.deb ... 180s Unpacking python3.13-minimal (3.13.0-2) ... 180s Selecting previously unselected package libtcl8.6:s390x. 180s Preparing to unpack .../002-libtcl8.6_8.6.15+dfsg-2_s390x.deb ... 180s Unpacking libtcl8.6:s390x (8.6.15+dfsg-2) ... 180s Selecting previously unselected package libfreetype6:s390x. 180s Preparing to unpack .../003-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 180s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 180s Selecting previously unselected package fonts-dejavu-mono. 180s Preparing to unpack .../004-fonts-dejavu-mono_2.37-8_all.deb ... 180s Unpacking fonts-dejavu-mono (2.37-8) ... 180s Selecting previously unselected package fonts-dejavu-core. 180s Preparing to unpack .../005-fonts-dejavu-core_2.37-8_all.deb ... 180s Unpacking fonts-dejavu-core (2.37-8) ... 180s Selecting previously unselected package fontconfig-config. 180s Preparing to unpack .../006-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 180s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 180s Selecting previously unselected package libfontconfig1:s390x. 180s Preparing to unpack .../007-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 180s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 180s Selecting previously unselected package libxrender1:s390x. 180s Preparing to unpack .../008-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 180s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 180s Selecting previously unselected package libxft2:s390x. 180s Preparing to unpack .../009-libxft2_2.3.6-1build1_s390x.deb ... 180s Unpacking libxft2:s390x (2.3.6-1build1) ... 180s Selecting previously unselected package x11-common. 180s Preparing to unpack .../010-x11-common_1%3a7.7+23ubuntu3_all.deb ... 180s Unpacking x11-common (1:7.7+23ubuntu3) ... 180s Selecting previously unselected package libxss1:s390x. 180s Preparing to unpack .../011-libxss1_1%3a1.2.3-1build3_s390x.deb ... 180s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 180s Selecting previously unselected package libtk8.6:s390x. 180s Preparing to unpack .../012-libtk8.6_8.6.15-1_s390x.deb ... 180s Unpacking libtk8.6:s390x (8.6.15-1) ... 180s Selecting previously unselected package tk8.6-blt2.5. 180s Preparing to unpack .../013-tk8.6-blt2.5_2.5.3+dfsg-7build1_s390x.deb ... 180s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 181s Selecting previously unselected package blt. 181s Preparing to unpack .../014-blt_2.5.3+dfsg-7build1_s390x.deb ... 181s Unpacking blt (2.5.3+dfsg-7build1) ... 181s Selecting previously unselected package fonts-lyx. 181s Preparing to unpack .../015-fonts-lyx_2.4.2.1-1_all.deb ... 181s Unpacking fonts-lyx (2.4.2.1-1) ... 181s Selecting previously unselected package libblas3:s390x. 181s Preparing to unpack .../016-libblas3_3.12.0-3build2_s390x.deb ... 181s Unpacking libblas3:s390x (3.12.0-3build2) ... 181s Selecting previously unselected package libdeflate0:s390x. 181s Preparing to unpack .../017-libdeflate0_1.22-1_s390x.deb ... 181s Unpacking libdeflate0:s390x (1.22-1) ... 181s Selecting previously unselected package libgfortran5:s390x. 181s Preparing to unpack .../018-libgfortran5_14.2.0-8ubuntu1_s390x.deb ... 181s Unpacking libgfortran5:s390x (14.2.0-8ubuntu1) ... 181s Selecting previously unselected package libgomp1:s390x. 181s Preparing to unpack .../019-libgomp1_14.2.0-8ubuntu1_s390x.deb ... 181s Unpacking libgomp1:s390x (14.2.0-8ubuntu1) ... 181s Selecting previously unselected package libgraphite2-3:s390x. 181s Preparing to unpack .../020-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 181s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 181s Selecting previously unselected package libharfbuzz0b:s390x. 181s Preparing to unpack .../021-libharfbuzz0b_10.0.1-1_s390x.deb ... 181s Unpacking libharfbuzz0b:s390x (10.0.1-1) ... 181s Selecting previously unselected package libimagequant0:s390x. 181s Preparing to unpack .../022-libimagequant0_2.18.0-1build1_s390x.deb ... 181s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 181s Selecting previously unselected package libjpeg-turbo8:s390x. 181s Preparing to unpack .../023-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ... 181s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 181s Selecting previously unselected package libjpeg8:s390x. 181s Preparing to unpack .../024-libjpeg8_8c-2ubuntu11_s390x.deb ... 181s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 181s Selecting previously unselected package libjs-jquery. 181s Preparing to unpack .../025-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 181s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 181s Selecting previously unselected package libjs-jquery-ui. 181s Preparing to unpack .../026-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 181s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 181s Selecting previously unselected package liblapack3:s390x. 181s Preparing to unpack .../027-liblapack3_3.12.0-3build2_s390x.deb ... 181s Unpacking liblapack3:s390x (3.12.0-3build2) ... 181s Selecting previously unselected package liblbfgsb0:s390x. 181s Preparing to unpack .../028-liblbfgsb0_3.0+dfsg.4-1build1_s390x.deb ... 181s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1build1) ... 181s Selecting previously unselected package liblcms2-2:s390x. 181s Preparing to unpack .../029-liblcms2-2_2.16-2_s390x.deb ... 181s Unpacking liblcms2-2:s390x (2.16-2) ... 181s Selecting previously unselected package libpython3.13-stdlib:s390x. 181s Preparing to unpack .../030-libpython3.13-stdlib_3.13.0-2_s390x.deb ... 181s Unpacking libpython3.13-stdlib:s390x (3.13.0-2) ... 181s Selecting previously unselected package libqhull-r8.0:s390x. 181s Preparing to unpack .../031-libqhull-r8.0_2020.2-6build1_s390x.deb ... 181s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 181s Selecting previously unselected package libraqm0:s390x. 181s Preparing to unpack .../032-libraqm0_0.10.1-1build1_s390x.deb ... 181s Unpacking libraqm0:s390x (0.10.1-1build1) ... 181s Selecting previously unselected package libsharpyuv0:s390x. 181s Preparing to unpack .../033-libsharpyuv0_1.4.0-0.1_s390x.deb ... 181s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 181s Selecting previously unselected package libsymspg2:s390x. 181s Preparing to unpack .../034-libsymspg2_2.4.0-1ubuntu1_s390x.deb ... 181s Unpacking libsymspg2:s390x (2.4.0-1ubuntu1) ... 181s Selecting previously unselected package libjbig0:s390x. 181s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 181s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 181s Selecting previously unselected package libwebp7:s390x. 181s Preparing to unpack .../036-libwebp7_1.4.0-0.1_s390x.deb ... 181s Unpacking libwebp7:s390x (1.4.0-0.1) ... 181s Selecting previously unselected package libtiff6:s390x. 181s Preparing to unpack .../037-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 181s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 181s Selecting previously unselected package libwebpdemux2:s390x. 181s Preparing to unpack .../038-libwebpdemux2_1.4.0-0.1_s390x.deb ... 181s Unpacking libwebpdemux2:s390x (1.4.0-0.1) ... 181s Selecting previously unselected package libwebpmux3:s390x. 181s Preparing to unpack .../039-libwebpmux3_1.4.0-0.1_s390x.deb ... 181s Unpacking libwebpmux3:s390x (1.4.0-0.1) ... 181s Selecting previously unselected package libxslt1.1:s390x. 181s Preparing to unpack .../040-libxslt1.1_1.1.39-0exp1ubuntu1_s390x.deb ... 181s Unpacking libxslt1.1:s390x (1.1.39-0exp1ubuntu1) ... 181s Selecting previously unselected package python-matplotlib-data. 181s Preparing to unpack .../041-python-matplotlib-data_3.8.3-3_all.deb ... 181s Unpacking python-matplotlib-data (3.8.3-3) ... 181s Selecting previously unselected package python3.13. 181s Preparing to unpack .../042-python3.13_3.13.0-2_s390x.deb ... 181s Unpacking python3.13 (3.13.0-2) ... 181s Selecting previously unselected package python3-all. 181s Preparing to unpack .../043-python3-all_3.12.7-1_s390x.deb ... 181s Unpacking python3-all (3.12.7-1) ... 181s Selecting previously unselected package python3-annotated-types. 181s Preparing to unpack .../044-python3-annotated-types_0.7.0-1_all.deb ... 181s Unpacking python3-annotated-types (0.7.0-1) ... 181s Selecting previously unselected package python3-appdirs. 181s Preparing to unpack .../045-python3-appdirs_1.4.4-4_all.deb ... 181s Unpacking python3-appdirs (1.4.4-4) ... 181s Selecting previously unselected package python3-brotli. 181s Preparing to unpack .../046-python3-brotli_1.1.0-2build2_s390x.deb ... 181s Unpacking python3-brotli (1.1.0-2build2) ... 181s Selecting previously unselected package python3-bson. 181s Preparing to unpack .../047-python3-bson_4.7.3-2ubuntu1_all.deb ... 181s Unpacking python3-bson (4.7.3-2ubuntu1) ... 181s Selecting previously unselected package python3-numpy. 181s Preparing to unpack .../048-python3-numpy_1%3a1.26.4+ds-11build1_s390x.deb ... 181s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 181s Selecting previously unselected package python3-contourpy. 181s Preparing to unpack .../049-python3-contourpy_1.3.0-2_s390x.deb ... 181s Unpacking python3-contourpy (1.3.0-2) ... 181s Selecting previously unselected package python3-six. 181s Preparing to unpack .../050-python3-six_1.16.0-7_all.deb ... 181s Unpacking python3-six (1.16.0-7) ... 181s Selecting previously unselected package python3-dateutil. 181s Preparing to unpack .../051-python3-dateutil_2.9.0-2_all.deb ... 181s Unpacking python3-dateutil (2.9.0-2) ... 181s Selecting previously unselected package python3-tz. 181s Preparing to unpack .../052-python3-tz_2024.1-2_all.deb ... 181s Unpacking python3-tz (2024.1-2) ... 181s Selecting previously unselected package python3-pandas-lib:s390x. 181s Preparing to unpack .../053-python3-pandas-lib_2.2.3+dfsg-5_s390x.deb ... 181s Unpacking python3-pandas-lib:s390x (2.2.3+dfsg-5) ... 181s Selecting previously unselected package python3-pandas. 181s Preparing to unpack .../054-python3-pandas_2.2.3+dfsg-5_all.deb ... 181s Unpacking python3-pandas (2.2.3+dfsg-5) ... 181s Selecting previously unselected package python3-pydantic-core. 181s Preparing to unpack .../055-python3-pydantic-core_2.23.4-2_s390x.deb ... 181s Unpacking python3-pydantic-core (2.23.4-2) ... 182s Selecting previously unselected package python3-dnspython. 182s Preparing to unpack .../056-python3-dnspython_2.6.1-1ubuntu1_all.deb ... 182s Unpacking python3-dnspython (2.6.1-1ubuntu1) ... 182s Selecting previously unselected package python3-email-validator. 182s Preparing to unpack .../057-python3-email-validator_2.2.0-1_all.deb ... 182s Unpacking python3-email-validator (2.2.0-1) ... 182s Selecting previously unselected package python3-pydantic. 182s Preparing to unpack .../058-python3-pydantic_2.9.1-1_s390x.deb ... 182s Unpacking python3-pydantic (2.9.1-1) ... 182s Selecting previously unselected package python3-tqdm. 182s Preparing to unpack .../059-python3-tqdm_4.67.0-1_all.deb ... 182s Unpacking python3-tqdm (4.67.0-1) ... 182s Selecting previously unselected package python3-monty. 182s Preparing to unpack .../060-python3-monty_2024.7.29-1_all.deb ... 182s Unpacking python3-monty (2024.7.29-1) ... 182s Selecting previously unselected package python3-psutil. 182s Preparing to unpack .../061-python3-psutil_5.9.8-2build2_s390x.deb ... 182s Unpacking python3-psutil (5.9.8-2build2) ... 182s Selecting previously unselected package python3-ruamel.yaml.clib:s390x. 182s Preparing to unpack .../062-python3-ruamel.yaml.clib_0.2.8+ds-2_s390x.deb ... 182s Unpacking python3-ruamel.yaml.clib:s390x (0.2.8+ds-2) ... 182s Selecting previously unselected package python3-ruamel.yaml. 182s Preparing to unpack .../063-python3-ruamel.yaml_0.18.6+ds-3_all.deb ... 182s Unpacking python3-ruamel.yaml (0.18.6+ds-3) ... 182s Selecting previously unselected package python3-custodian. 182s Preparing to unpack .../064-python3-custodian_2024.6.24-1_all.deb ... 182s Unpacking python3-custodian (2024.6.24-1) ... 182s Selecting previously unselected package python3-cycler. 182s Preparing to unpack .../065-python3-cycler_0.12.1-1_all.deb ... 182s Unpacking python3-cycler (0.12.1-1) ... 182s Selecting previously unselected package python3-decorator. 182s Preparing to unpack .../066-python3-decorator_5.1.1-5_all.deb ... 182s Unpacking python3-decorator (5.1.1-5) ... 182s Selecting previously unselected package python3-fastjsonschema. 182s Preparing to unpack .../067-python3-fastjsonschema_2.20.0-1_all.deb ... 182s Unpacking python3-fastjsonschema (2.20.0-1) ... 182s Selecting previously unselected package python3-scipy. 182s Preparing to unpack .../068-python3-scipy_1.13.1-5_s390x.deb ... 182s Unpacking python3-scipy (1.13.1-5) ... 182s Selecting previously unselected package python3-ufolib2. 182s Preparing to unpack .../069-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 182s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 182s Selecting previously unselected package python3-mpmath. 182s Preparing to unpack .../070-python3-mpmath_1.3.0-1_all.deb ... 182s Unpacking python3-mpmath (1.3.0-1) ... 182s Selecting previously unselected package python3-sympy. 182s Preparing to unpack .../071-python3-sympy_1.13.3-1_all.deb ... 182s Unpacking python3-sympy (1.13.3-1) ... 182s Selecting previously unselected package python3-fs. 182s Preparing to unpack .../072-python3-fs_2.4.16-4_all.deb ... 182s Unpacking python3-fs (2.4.16-4) ... 182s Selecting previously unselected package python3-lxml:s390x. 182s Preparing to unpack .../073-python3-lxml_5.3.0-1_s390x.deb ... 182s Unpacking python3-lxml:s390x (5.3.0-1) ... 182s Selecting previously unselected package python3-lz4. 182s Preparing to unpack .../074-python3-lz4_4.0.2+dfsg-1build4_s390x.deb ... 182s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 182s Selecting previously unselected package python3-unicodedata2. 182s Preparing to unpack .../075-python3-unicodedata2_15.1.0+ds-1build1_s390x.deb ... 182s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 182s Selecting previously unselected package unicode-data. 182s Preparing to unpack .../076-unicode-data_15.1.0-1_all.deb ... 182s Unpacking unicode-data (15.1.0-1) ... 183s Selecting previously unselected package python3-fonttools. 183s Preparing to unpack .../077-python3-fonttools_4.46.0-1build2_s390x.deb ... 183s Unpacking python3-fonttools (4.46.0-1build2) ... 183s Selecting previously unselected package python3-iniconfig. 183s Preparing to unpack .../078-python3-iniconfig_1.1.1-2_all.deb ... 183s Unpacking python3-iniconfig (1.1.1-2) ... 183s Selecting previously unselected package python3-joblib. 183s Preparing to unpack .../079-python3-joblib_1.3.2-5_all.deb ... 183s Unpacking python3-joblib (1.3.2-5) ... 183s Selecting previously unselected package python3-platformdirs. 183s Preparing to unpack .../080-python3-platformdirs_4.3.6-1_all.deb ... 183s Unpacking python3-platformdirs (4.3.6-1) ... 183s Selecting previously unselected package python3-traitlets. 183s Preparing to unpack .../081-python3-traitlets_5.14.3+really5.14.3-1_all.deb ... 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... 256s Setting up python3-tk:s390x (3.12.7-1) ... 256s Setting up python3-pil.imagetk:s390x (10.4.0-1ubuntu1) ... 256s Setting up python3-fonttools (4.46.0-1build2) ... 258s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 258s Setting up python3-matplotlib (3.8.3-3) ... 262s Setting up python3-pymatgen (2024.6.10+dfsg1-8) ... 263s /usr/lib/python3/dist-packages/pymatgen/io/lammps/outputs.py:115: SyntaxWarning: invalid escape sequence '\+' 263s pattern = file_pattern.replace("+","\+").replace("*", "([0-9]+)").replace("\\", "\\\\") 264s /usr/lib/python3/dist-packages/pymatgen/io/lammps/outputs.py:115: SyntaxWarning: invalid escape sequence '\+' 264s pattern = file_pattern.replace("+","\+").replace("*", "([0-9]+)").replace("\\", "\\\\") 264s Setting up autopkgtest-satdep (0) ... 264s Processing triggers for libc-bin (2.40-1ubuntu3) ... 264s Processing triggers for systemd (256.5-2ubuntu4) ... 265s Processing triggers for man-db (2.12.1-3) ... 270s (Reading database ... 83776 files and directories currently installed.) 270s Removing autopkgtest-satdep (0) ... 270s autopkgtest [10:46:50]: test test-custodian: [----------------------- 271s ============================= test session starts ============================== 271s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 271s cachedir: .pytest_cache 271s rootdir: /tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests 271s plugins: typeguard-4.4.1 272s collecting ... collected 18 items / 13 errors / 3 skipped 272s 272s ==================================== ERRORS ==================================== 272s _________________ ERROR collecting tests/cp2k/test_handlers.py _________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/cp2k/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/cp2k/test_handlers.py:11: in 272s from pymatgen.io.cp2k.inputs import Keyword, KeywordList 272s /usr/lib/python3/dist-packages/pymatgen/io/cp2k/inputs.py:41: in 272s from pymatgen.core import Element 272s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:12: in 272s from pymatgen.core.composition import Composition 272s /usr/lib/python3/dist-packages/pymatgen/core/composition.py:22: in 272s from pymatgen.core.periodic_table import DummySpecies, Element, ElementType, Species, get_el_sp 272s /usr/lib/python3/dist-packages/pymatgen/core/periodic_table.py:17: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ___________________ ERROR collecting tests/cp2k/test_jobs.py ___________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/cp2k/test_jobs.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/cp2k/test_jobs.py:11: in 272s from custodian.cp2k.jobs import Cp2kJob 272s /usr/lib/python3/dist-packages/custodian/cp2k/jobs.py:10: in 272s from pymatgen.io.cp2k.inputs import Cp2kInput, Keyword 272s /usr/lib/python3/dist-packages/pymatgen/io/cp2k/inputs.py:41: in 272s from pymatgen.core import Element 272s /usr/lib/python3/dist-packages/pymatgen/core/__init__.py:12: in 272s from pymatgen.core.composition import Composition 272s /usr/lib/python3/dist-packages/pymatgen/core/composition.py:22: in 272s from pymatgen.core.periodic_table import DummySpecies, Element, ElementType, Species, get_el_sp 272s /usr/lib/python3/dist-packages/pymatgen/core/periodic_table.py:17: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s _________________ ERROR collecting tests/feff/test_handlers.py _________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/feff/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/feff/test_handlers.py:6: in 272s from custodian.feff.handlers import UnconvergedErrorHandler 272s /usr/lib/python3/dist-packages/custodian/feff/handlers.py:9: in 272s from pymatgen.io.feff.sets import FEFFDictSet 272s /usr/lib/python3/dist-packages/pymatgen/io/feff/__init__.py:9: in 272s from .inputs import ( 272s /usr/lib/python3/dist-packages/pymatgen/io/feff/inputs.py:15: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ___________________ ERROR collecting tests/feff/test_jobs.py ___________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/feff/test_jobs.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/feff/test_jobs.py:5: in 272s from pymatgen.io.feff.inputs import Atoms, Tags 272s /usr/lib/python3/dist-packages/pymatgen/io/feff/__init__.py:9: in 272s from .inputs import ( 272s /usr/lib/python3/dist-packages/pymatgen/io/feff/inputs.py:15: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s _______________ ERROR collecting tests/gaussian/test_handlers.py _______________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/gaussian/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/gaussian/test_handlers.py:8: in 272s from custodian.gaussian.handlers import GaussianErrorHandler, WallTimeErrorHandler 272s /usr/lib/python3/dist-packages/custodian/gaussian/handlers.py:14: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s _________________ ERROR collecting tests/gaussian/test_jobs.py _________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/gaussian/test_jobs.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/gaussian/test_jobs.py:7: in 272s from custodian.gaussian.jobs import GaussianJob 272s /usr/lib/python3/dist-packages/custodian/gaussian/jobs.py:12: in 272s from pymatgen.io.gaussian import GaussianInput, GaussianOutput 272s /usr/lib/python3/dist-packages/pymatgen/io/gaussian.py:9: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s _______________ ERROR collecting tests/lobster/test_handlers.py ________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/lobster/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/lobster/test_handlers.py:3: in 272s from custodian.lobster.handlers import ChargeSpillingValidator, EnoughBandsValidator, LobsterFilesValidator 272s /usr/lib/python3/dist-packages/custodian/lobster/handlers.py:5: in 272s from pymatgen.io.lobster import Lobsterout 272s /usr/lib/python3/dist-packages/pymatgen/io/lobster/__init__.py:10: in 272s from .inputs import Lobsterin 272s /usr/lib/python3/dist-packages/pymatgen/io/lobster/inputs.py:20: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ________________ ERROR collecting tests/nwchem/test_handlers.py ________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/nwchem/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/nwchem/test_handlers.py:5: in 272s from custodian.nwchem.handlers import NwchemErrorHandler 272s /usr/lib/python3/dist-packages/custodian/nwchem/handlers.py:8: in 272s from pymatgen.io.nwchem import NwInput, NwOutput 272s /usr/lib/python3/dist-packages/pymatgen/io/nwchem.py:29: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s _________________ ERROR collecting tests/vasp/test_handlers.py _________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/vasp/test_handlers.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/vasp/test_handlers.py:10: in 272s from pymatgen.io.vasp.inputs import Incar, Kpoints, Structure, VaspInput 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 272s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:27: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ____________________ ERROR collecting tests/vasp/test_io.py ____________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/vasp/test_io.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/vasp/test_io.py:5: in 272s from custodian.vasp.io import load_outcar, load_vasprun 272s /usr/lib/python3/dist-packages/custodian/vasp/io.py:3: in 272s from pymatgen.io.vasp.outputs import Outcar, Vasprun 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 272s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:27: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ___________________ ERROR collecting tests/vasp/test_jobs.py ___________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/vasp/test_jobs.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/vasp/test_jobs.py:10: in 272s from pymatgen.io.vasp import Incar, Kpoints, Poscar 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 272s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:27: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s __________________ ERROR collecting tests/vasp/test_utils.py ___________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/vasp/test_utils.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/vasp/test_utils.py:5: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s ________________ ERROR collecting tests/vasp/test_validators.py ________________ 272s ImportError while importing test module '/tmp/autopkgtest.XmTSfM/autopkgtest_tmp/runtests/tests/vasp/test_validators.py'. 272s Hint: make sure your test modules/packages have valid Python names. 272s Traceback: 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 272s from . import multiarray 272s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 272s from . import overrides 272s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 272s from numpy.core._multiarray_umath import ( 272s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 272s 272s During handling of the above exception, another exception occurred: 272s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 272s from numpy.__config__ import show as show_config 272s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 272s from numpy.core._multiarray_umath import ( 272s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 272s raise ImportError(msg) 272s E ImportError: 272s E 272s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 272s E 272s E Importing the numpy C-extensions failed. This error can happen for 272s E many reasons, often due to issues with your setup or how NumPy was 272s E installed. 272s E 272s E We have compiled some common reasons and troubleshooting tips at: 272s E 272s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 272s E 272s E Please note and check the following: 272s E 272s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 272s E * The NumPy version is: "1.26.4" 272s E 272s E and make sure that they are the versions you expect. 272s E Please carefully study the documentation linked above for further help. 272s E 272s E Original error was: No module named 'numpy.core._multiarray_umath' 272s 272s The above exception was the direct cause of the following exception: 272s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 272s return _bootstrap._gcd_import(name[level:], package, level) 272s tests/vasp/test_validators.py:6: in 272s from custodian.vasp.validators import VaspAECCARValidator, VaspFilesValidator, VaspNpTMDValidator, VasprunXMLValidator 272s /usr/lib/python3/dist-packages/custodian/vasp/validators.py:9: in 272s from pymatgen.io.vasp import Chgcar, Incar 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/__init__.py:10: in 272s from .inputs import Incar, Kpoints, Poscar, Potcar, PotcarSingle, VaspInput 272s /usr/lib/python3/dist-packages/pymatgen/io/vasp/inputs.py:27: in 272s import numpy as np 272s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 272s raise ImportError(msg) from e 272s E ImportError: Error importing numpy: you should not try to import numpy from 272s E its source directory; please exit the numpy source tree, and relaunch 272s E your python interpreter from there. 272s =========================== short test summary info ============================ 272s ERROR tests/cp2k/test_handlers.py 272s ERROR tests/cp2k/test_jobs.py 272s ERROR tests/feff/test_handlers.py 272s ERROR tests/feff/test_jobs.py 272s ERROR tests/gaussian/test_handlers.py 272s ERROR tests/gaussian/test_jobs.py 272s ERROR tests/lobster/test_handlers.py 272s ERROR tests/nwchem/test_handlers.py 272s ERROR tests/vasp/test_handlers.py 272s ERROR tests/vasp/test_io.py 272s ERROR tests/vasp/test_jobs.py 272s ERROR tests/vasp/test_utils.py 272s ERROR tests/vasp/test_validators.py 272s !!!!!!!!!!!!!!!!!!! Interrupted: 13 errors during collection !!!!!!!!!!!!!!!!!!! 272s ======================== 3 skipped, 13 errors in 1.15s ========================= 273s autopkgtest [10:46:53]: test test-custodian: -----------------------] 273s test-custodian FAIL non-zero exit status 2 273s autopkgtest [10:46:53]: test test-custodian: - - - - - - - - - - results - - - - - - - - - - 274s autopkgtest [10:46:54]: @@@@@@@@@@@@@@@@@@@@ summary 274s test-custodian FAIL non-zero exit status 2 284s nova [W] Using flock in prodstack6-s390x 284s Creating nova instance adt-plucky-s390x-custodian-20241113-104219-juju-7f2275-prod-proposed-migration-environment-20-a1c31f9a-66af-4366-a003-49a64ee38f94 from image adt/ubuntu-plucky-s390x-server-20241113.img (UUID e740277e-1f72-40ae-bfbe-46030537c71c)...