0s autopkgtest [10:25:59]: starting date and time: 2025-03-13 10:25:59+0000 0s autopkgtest [10:25:59]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [10:25:59]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9va17ze5/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rdkit --apt-upgrade rdkit --timeout-short=1200 --timeout-copy=80000 --timeout-build=80000 --env=ADT_TEST_TRIGGERS=rdkit/202409.6-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-riscv64-16.secgroup --name adt-plucky-riscv64-rdkit-20250313-102559-juju-7f2275-prod-proposed-migration-environment-20-7d7cfbba-9e83-4c3f-9a3f-9457580d4d17 --image adt/ubuntu-plucky-riscv64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-riscv64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 255s autopkgtest [10:30:14]: testbed dpkg architecture: riscv64 256s autopkgtest [10:30:15]: testbed apt version: 2.9.32ubuntu1 259s autopkgtest [10:30:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 262s autopkgtest [10:30:19]: testbed release detected to be: None 266s autopkgtest [10:30:25]: updating testbed package index (apt update) 268s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 269s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 269s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 269s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 269s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [43.9 kB] 270s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [396 kB] 272s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [11.5 kB] 272s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main riscv64 Packages [58.5 kB] 272s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 Packages [330 kB] 272s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse riscv64 Packages [2516 B] 275s Fetched 953 kB in 5s (180 kB/s) 293s Reading package lists... 299s Reading package lists... 301s Building dependency tree... 301s Reading state information... 305s Calculating upgrade... 307s Calculating upgrade... 308s The following packages will be upgraded: 308s gir1.2-glib-2.0 htop libglib2.0-0t64 libglib2.0-data 309s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 309s Need to get 2083 kB of archives. 309s After this operation, 0 B of additional disk space will be used. 309s Get:1 http://ftpmaster.internal/ubuntu plucky/main riscv64 gir1.2-glib-2.0 riscv64 2.84.0-1 [185 kB] 309s Get:2 http://ftpmaster.internal/ubuntu plucky/main riscv64 libglib2.0-0t64 riscv64 2.84.0-1 [1680 kB] 309s Get:3 http://ftpmaster.internal/ubuntu plucky/main riscv64 libglib2.0-data all 2.84.0-1 [53.0 kB] 309s Get:4 http://ftpmaster.internal/ubuntu plucky/main riscv64 htop riscv64 3.4.0-2 [165 kB] 316s Fetched 2083 kB in 1s (1531 kB/s) 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75715 files and directories currently installed.) 317s Preparing to unpack .../gir1.2-glib-2.0_2.84.0-1_riscv64.deb ... 318s Unpacking gir1.2-glib-2.0:riscv64 (2.84.0-1) over (2.83.5-1) ... 318s Preparing to unpack .../libglib2.0-0t64_2.84.0-1_riscv64.deb ... 319s Unpacking libglib2.0-0t64:riscv64 (2.84.0-1) over (2.83.5-1) ... 324s Preparing to unpack .../libglib2.0-data_2.84.0-1_all.deb ... 324s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 324s Preparing to unpack .../htop_3.4.0-2_riscv64.deb ... 324s Unpacking htop (3.4.0-2) over (3.4.0-1) ... 324s Setting up htop (3.4.0-2) ... 324s Setting up libglib2.0-0t64:riscv64 (2.84.0-1) ... 324s No schema files found: doing nothing. 324s Setting up libglib2.0-data (2.84.0-1) ... 324s Setting up gir1.2-glib-2.0:riscv64 (2.84.0-1) ... 324s Processing triggers for man-db (2.13.0-1) ... 326s Processing triggers for libc-bin (2.41-1ubuntu1) ... 334s Reading package lists... 336s Building dependency tree... 336s Reading state information... 339s Solving dependencies... 340s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 341s autopkgtest [10:31:40]: upgrading testbed (apt dist-upgrade and autopurge) 343s Reading package lists... 345s Building dependency tree... 345s Reading state information... 347s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 348s Starting 2 pkgProblemResolver with broken count: 0 348s Done 351s Entering ResolveByKeep 353s 354s Calculating upgrade... 356s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 358s Reading package lists... 361s Building dependency tree... 361s Reading state information... 363s Starting pkgProblemResolver with broken count: 0 363s Starting 2 pkgProblemResolver with broken count: 0 363s Done 367s Solving dependencies... 368s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 387s autopkgtest [10:32:26]: testbed running kernel: Linux 6.11.0-8-generic #8.1-Ubuntu SMP PREEMPT_DYNAMIC Tue Oct 1 11:40:56 UTC 2024 389s autopkgtest [10:32:28]: @@@@@@@@@@@@@@@@@@@@ apt-source rdkit 441s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe rdkit 202409.6-2 (dsc) [3055 B] 441s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe rdkit 202409.6-2 (tar) [63.5 MB] 441s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe rdkit 202409.6-2 (diff) [40.0 kB] 444s gpgv: Signature made Sun Mar 9 10:04:40 2025 UTC 444s gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 444s gpgv: Can't check signature: No public key 444s dpkg-source: warning: cannot verify inline signature for ./rdkit_202409.6-2.dsc: no acceptable signature found 496s autopkgtest [10:34:15]: testing package rdkit version 202409.6-2 497s autopkgtest [10:34:16]: build not needed 560s autopkgtest [10:35:19]: test installcheck: preparing testbed 564s Reading package lists... 567s Building dependency tree... 567s Reading state information... 570s Starting pkgProblemResolver with broken count: 0 570s Starting 2 pkgProblemResolver with broken count: 0 570s Done 574s The following NEW packages will be installed: 574s fontconfig-config fonts-freefont-ttf libblas3 libboost-iostreams1.83.0 574s libboost-numpy1.83.0 libboost-python1.83.0 libboost-serialization1.83.0 574s libcairo2 libcoordgen3 libfontconfig1 libgfortran5 libinchi1.07 574s libio-pty-perl libipc-run-perl libjs-jquery libjs-underscore libjson-perl 574s liblapack3 libmaeparser1 libpixman-1-0 libpq5 librdkit-dev librdkit1t64 574s libxcb-render0 libxcb-shm0 libxrender1 libxslt1.1 postgresql-17 574s postgresql-17-rdkit postgresql-client-17 postgresql-client-common 574s postgresql-common postgresql-common-dev python3-numpy python3-numpy-dev 574s python3-rdkit rdkit-data rdkit-doc ssl-cert 575s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 575s Need to get 54.0 MB of archives. 575s After this operation, 277 MB of additional disk space will be used. 575s Get:1 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjson-perl all 4.10000-1 [81.9 kB] 576s Get:2 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-client-common all 274 [47.6 kB] 576s Get:3 http://ftpmaster.internal/ubuntu plucky/main riscv64 libio-pty-perl riscv64 1:1.20-1build3 [31.6 kB] 576s Get:4 http://ftpmaster.internal/ubuntu plucky/main riscv64 libipc-run-perl all 20231003.0-2 [91.5 kB] 576s Get:5 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-common-dev all 274 [73.0 kB] 576s Get:6 http://ftpmaster.internal/ubuntu plucky/main riscv64 ssl-cert all 1.1.3ubuntu1 [18.7 kB] 576s Get:7 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-common all 274 [101 kB] 576s Get:8 http://ftpmaster.internal/ubuntu plucky/main riscv64 python3-numpy-dev riscv64 1:2.2.3+ds-4 [197 kB] 576s Get:9 http://ftpmaster.internal/ubuntu plucky/main riscv64 libblas3 riscv64 3.12.1-2 [140 kB] 576s Get:10 http://ftpmaster.internal/ubuntu plucky/main riscv64 libgfortran5 riscv64 15-20250222-0ubuntu1 [499 kB] 576s Get:11 http://ftpmaster.internal/ubuntu plucky/main riscv64 liblapack3 riscv64 3.12.1-2 [2305 kB] 576s Get:12 http://ftpmaster.internal/ubuntu plucky/main riscv64 python3-numpy riscv64 1:2.2.3+ds-4 [3856 kB] 577s Get:13 http://ftpmaster.internal/ubuntu plucky/main riscv64 fonts-freefont-ttf all 20211204+svn4273-2 [5641 kB] 578s Get:14 http://ftpmaster.internal/ubuntu plucky/main riscv64 fontconfig-config riscv64 2.15.0-2ubuntu1 [37.5 kB] 578s Get:15 http://ftpmaster.internal/ubuntu plucky/main riscv64 libboost-iostreams1.83.0 riscv64 1.83.0-4.1ubuntu1 [261 kB] 578s Get:16 http://ftpmaster.internal/ubuntu plucky/main riscv64 libboost-python1.83.0 riscv64 1.83.0-4.1ubuntu1 [328 kB] 578s Get:17 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libboost-numpy1.83.0 riscv64 1.83.0-4.1ubuntu1 [243 kB] 578s Get:18 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libboost-serialization1.83.0 riscv64 1.83.0-4.1ubuntu1 [354 kB] 578s Get:19 http://ftpmaster.internal/ubuntu plucky/main riscv64 libfontconfig1 riscv64 2.15.0-2ubuntu1 [147 kB] 578s Get:20 http://ftpmaster.internal/ubuntu plucky/main riscv64 libpixman-1-0 riscv64 0.44.0-3 [206 kB] 578s Get:21 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxcb-render0 riscv64 1.17.0-2 [17.1 kB] 578s Get:22 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxcb-shm0 riscv64 1.17.0-2 [5950 B] 578s Get:23 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxrender1 riscv64 1:0.9.10-1.1build1 [20.1 kB] 578s Get:24 http://ftpmaster.internal/ubuntu plucky/main riscv64 libcairo2 riscv64 1.18.2-2 [612 kB] 578s Get:25 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libcoordgen3 riscv64 3.0.2-1 [215 kB] 578s Get:26 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libinchi1.07 riscv64 1.07.3+dfsg-1 [632 kB] 578s Get:27 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 578s Get:28 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 578s Get:29 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libmaeparser1 riscv64 1.3.1-1build1 [102 kB] 578s Get:30 http://ftpmaster.internal/ubuntu plucky/main riscv64 libpq5 riscv64 17.4-1 [148 kB] 578s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 librdkit1t64 riscv64 202409.6-2 [5717 kB] 580s Get:32 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 librdkit-dev riscv64 202409.6-2 [348 kB] 580s Get:33 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxslt1.1 riscv64 1.1.39-0exp1ubuntu2 [178 kB] 580s Get:34 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-client-17 riscv64 17.4-1 [1387 kB] 580s Get:35 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-17 riscv64 17.4-1 [5505 kB] 581s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 postgresql-17-rdkit riscv64 202409.6-2 [127 kB] 581s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 rdkit-data all 202409.6-2 [12.6 MB] 583s Get:38 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 python3-rdkit riscv64 202409.6-2 [4925 kB] 583s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 rdkit-doc all 202409.6-2 [6347 kB] 591s Preconfiguring packages ... 593s Fetched 54.0 MB in 10s (5623 kB/s) 594s Selecting previously unselected package libjson-perl. 594s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75715 files and directories currently installed.) 594s Preparing to unpack .../00-libjson-perl_4.10000-1_all.deb ... 594s Unpacking libjson-perl (4.10000-1) ... 595s Selecting previously unselected package postgresql-client-common. 595s Preparing to unpack .../01-postgresql-client-common_274_all.deb ... 596s Unpacking postgresql-client-common (274) ... 596s Selecting previously unselected package libio-pty-perl. 596s Preparing to unpack .../02-libio-pty-perl_1%3a1.20-1build3_riscv64.deb ... 596s Unpacking libio-pty-perl (1:1.20-1build3) ... 597s Selecting previously unselected package libipc-run-perl. 597s Preparing to unpack .../03-libipc-run-perl_20231003.0-2_all.deb ... 597s Unpacking libipc-run-perl (20231003.0-2) ... 597s Selecting previously unselected package postgresql-common-dev. 598s Preparing to unpack .../04-postgresql-common-dev_274_all.deb ... 598s Unpacking postgresql-common-dev (274) ... 598s Selecting previously unselected package ssl-cert. 598s Preparing to unpack .../05-ssl-cert_1.1.3ubuntu1_all.deb ... 598s Unpacking ssl-cert (1.1.3ubuntu1) ... 599s Selecting previously unselected package postgresql-common. 599s Preparing to unpack .../06-postgresql-common_274_all.deb ... 599s Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common' 600s Unpacking postgresql-common (274) ... 601s Selecting previously unselected package python3-numpy-dev:riscv64. 601s Preparing to unpack .../07-python3-numpy-dev_1%3a2.2.3+ds-4_riscv64.deb ... 601s Unpacking python3-numpy-dev:riscv64 (1:2.2.3+ds-4) ... 602s Selecting previously unselected package libblas3:riscv64. 602s Preparing to unpack .../08-libblas3_3.12.1-2_riscv64.deb ... 602s Unpacking libblas3:riscv64 (3.12.1-2) ... 602s Selecting previously unselected package libgfortran5:riscv64. 602s Preparing to unpack .../09-libgfortran5_15-20250222-0ubuntu1_riscv64.deb ... 602s Unpacking libgfortran5:riscv64 (15-20250222-0ubuntu1) ... 603s Selecting previously unselected package liblapack3:riscv64. 603s Preparing to unpack .../10-liblapack3_3.12.1-2_riscv64.deb ... 603s Unpacking liblapack3:riscv64 (3.12.1-2) ... 605s Selecting previously unselected package python3-numpy. 605s Preparing to unpack .../11-python3-numpy_1%3a2.2.3+ds-4_riscv64.deb ... 606s Unpacking python3-numpy (1:2.2.3+ds-4) ... 611s Selecting previously unselected package fonts-freefont-ttf. 611s Preparing to unpack .../12-fonts-freefont-ttf_20211204+svn4273-2_all.deb ... 611s Unpacking fonts-freefont-ttf (20211204+svn4273-2) ... 615s Selecting previously unselected package fontconfig-config. 615s Preparing to unpack .../13-fontconfig-config_2.15.0-2ubuntu1_riscv64.deb ... 626s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 627s Selecting previously unselected package libboost-iostreams1.83.0:riscv64. 627s Preparing to unpack .../14-libboost-iostreams1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 627s Unpacking libboost-iostreams1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 628s Selecting previously unselected package libboost-python1.83.0. 628s Preparing to unpack .../15-libboost-python1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 628s Unpacking libboost-python1.83.0 (1.83.0-4.1ubuntu1) ... 629s Selecting previously unselected package libboost-numpy1.83.0. 630s Preparing to unpack .../16-libboost-numpy1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 630s Unpacking libboost-numpy1.83.0 (1.83.0-4.1ubuntu1) ... 631s Selecting previously unselected package libboost-serialization1.83.0:riscv64. 631s Preparing to unpack .../17-libboost-serialization1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 631s Unpacking libboost-serialization1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 632s Selecting previously unselected package libfontconfig1:riscv64. 632s Preparing to unpack .../18-libfontconfig1_2.15.0-2ubuntu1_riscv64.deb ... 632s Unpacking libfontconfig1:riscv64 (2.15.0-2ubuntu1) ... 632s Selecting previously unselected package libpixman-1-0:riscv64. 632s Preparing to unpack .../19-libpixman-1-0_0.44.0-3_riscv64.deb ... 632s Unpacking libpixman-1-0:riscv64 (0.44.0-3) ... 633s Selecting previously unselected package libxcb-render0:riscv64. 633s Preparing to unpack .../20-libxcb-render0_1.17.0-2_riscv64.deb ... 633s Unpacking libxcb-render0:riscv64 (1.17.0-2) ... 634s Selecting previously unselected package libxcb-shm0:riscv64. 634s Preparing to unpack .../21-libxcb-shm0_1.17.0-2_riscv64.deb ... 634s Unpacking libxcb-shm0:riscv64 (1.17.0-2) ... 634s Selecting previously unselected package libxrender1:riscv64. 634s Preparing to unpack .../22-libxrender1_1%3a0.9.10-1.1build1_riscv64.deb ... 634s Unpacking libxrender1:riscv64 (1:0.9.10-1.1build1) ... 635s Selecting previously unselected package libcairo2:riscv64. 635s Preparing to unpack .../23-libcairo2_1.18.2-2_riscv64.deb ... 635s Unpacking libcairo2:riscv64 (1.18.2-2) ... 636s Selecting previously unselected package libcoordgen3:riscv64. 636s Preparing to unpack .../24-libcoordgen3_3.0.2-1_riscv64.deb ... 636s Unpacking libcoordgen3:riscv64 (3.0.2-1) ... 637s Selecting previously unselected package libinchi1.07. 637s Preparing to unpack .../25-libinchi1.07_1.07.3+dfsg-1_riscv64.deb ... 637s Unpacking libinchi1.07 (1.07.3+dfsg-1) ... 638s Selecting previously unselected package libjs-jquery. 638s Preparing to unpack .../26-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 638s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 639s Selecting previously unselected package libjs-underscore. 639s Preparing to unpack .../27-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 639s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 639s Selecting previously unselected package libmaeparser1:riscv64. 640s Preparing to unpack .../28-libmaeparser1_1.3.1-1build1_riscv64.deb ... 640s Unpacking libmaeparser1:riscv64 (1.3.1-1build1) ... 640s Selecting previously unselected package libpq5:riscv64. 640s Preparing to unpack .../29-libpq5_17.4-1_riscv64.deb ... 640s Unpacking libpq5:riscv64 (17.4-1) ... 641s Selecting previously unselected package librdkit1t64. 641s Preparing to unpack .../30-librdkit1t64_202409.6-2_riscv64.deb ... 641s Unpacking librdkit1t64 (202409.6-2) ... 646s Selecting previously unselected package librdkit-dev. 646s Preparing to unpack .../31-librdkit-dev_202409.6-2_riscv64.deb ... 646s Unpacking librdkit-dev (202409.6-2) ... 648s Selecting previously unselected package libxslt1.1:riscv64. 648s Preparing to unpack .../32-libxslt1.1_1.1.39-0exp1ubuntu2_riscv64.deb ... 648s Unpacking libxslt1.1:riscv64 (1.1.39-0exp1ubuntu2) ... 648s Selecting previously unselected package postgresql-client-17. 649s Preparing to unpack .../33-postgresql-client-17_17.4-1_riscv64.deb ... 649s Unpacking postgresql-client-17 (17.4-1) ... 650s Selecting previously unselected package postgresql-17. 650s Preparing to unpack .../34-postgresql-17_17.4-1_riscv64.deb ... 651s Unpacking postgresql-17 (17.4-1) ... 655s Selecting previously unselected package postgresql-17-rdkit. 655s Preparing to unpack .../35-postgresql-17-rdkit_202409.6-2_riscv64.deb ... 655s Unpacking postgresql-17-rdkit (202409.6-2) ... 656s Selecting previously unselected package rdkit-data. 656s Preparing to unpack .../36-rdkit-data_202409.6-2_all.deb ... 656s Unpacking rdkit-data (202409.6-2) ... 666s Selecting previously unselected package python3-rdkit. 666s Preparing to unpack .../37-python3-rdkit_202409.6-2_riscv64.deb ... 666s Unpacking python3-rdkit (202409.6-2) ... 672s Selecting previously unselected package rdkit-doc. 672s Preparing to unpack .../38-rdkit-doc_202409.6-2_all.deb ... 672s Unpacking rdkit-doc (202409.6-2) ... 694s Setting up postgresql-client-common (274) ... 694s Setting up libboost-python1.83.0 (1.83.0-4.1ubuntu1) ... 694s Setting up libpixman-1-0:riscv64 (0.44.0-3) ... 694s Setting up libxrender1:riscv64 (1:0.9.10-1.1build1) ... 694s Setting up libio-pty-perl (1:1.20-1build3) ... 694s Setting up libxcb-render0:riscv64 (1.17.0-2) ... 694s Setting up libpq5:riscv64 (17.4-1) ... 694s Setting up fonts-freefont-ttf (20211204+svn4273-2) ... 694s Setting up libxcb-shm0:riscv64 (1.17.0-2) ... 694s Setting up rdkit-data (202409.6-2) ... 694s Setting up libboost-serialization1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 694s Setting up libboost-numpy1.83.0 (1.83.0-4.1ubuntu1) ... 694s Setting up libblas3:riscv64 (3.12.1-2) ... 694s update-alternatives: using /usr/lib/riscv64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/riscv64-linux-gnu/libblas.so.3 (libblas.so.3-riscv64-linux-gnu) in auto mode 694s Setting up ssl-cert (1.1.3ubuntu1) ... 708s Created symlink '/etc/systemd/system/multi-user.target.wants/ssl-cert.service' → '/usr/lib/systemd/system/ssl-cert.service'. 717s Setting up libboost-iostreams1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 717s Setting up python3-numpy-dev:riscv64 (1:2.2.3+ds-4) ... 717s Setting up libipc-run-perl (20231003.0-2) ... 717s Setting up libgfortran5:riscv64 (15-20250222-0ubuntu1) ... 717s Setting up libjson-perl (4.10000-1) ... 717s Setting up libxslt1.1:riscv64 (1.1.39-0exp1ubuntu2) ... 717s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 717s Setting up libcoordgen3:riscv64 (3.0.2-1) ... 717s Setting up libinchi1.07 (1.07.3+dfsg-1) ... 717s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 717s Setting up postgresql-common-dev (274) ... 717s Setting up liblapack3:riscv64 (3.12.1-2) ... 718s update-alternatives: using /usr/lib/riscv64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/riscv64-linux-gnu/liblapack.so.3 (liblapack.so.3-riscv64-linux-gnu) in auto mode 718s Setting up postgresql-client-17 (17.4-1) ... 741s update-alternatives: using /usr/share/postgresql/17/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode 741s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 751s Setting up rdkit-doc (202409.6-2) ... 751s Setting up libmaeparser1:riscv64 (1.3.1-1build1) ... 751s Setting up postgresql-common (274) ... 765s Creating config file /etc/postgresql-common/createcluster.conf with new version 770s Building PostgreSQL dictionaries from installed myspell/hunspell packages... 770s Removing obsolete dictionary files: 788s Created symlink '/etc/systemd/system/multi-user.target.wants/postgresql.service' → '/usr/lib/systemd/system/postgresql.service'. 798s Setting up python3-numpy (1:2.2.3+ds-4) ... 839s Setting up libfontconfig1:riscv64 (2.15.0-2ubuntu1) ... 839s Setting up postgresql-17 (17.4-1) ... 873s Creating new PostgreSQL cluster 17/main ... 873s /usr/lib/postgresql/17/bin/initdb -D /var/lib/postgresql/17/main --auth-local peer --auth-host scram-sha-256 --no-instructions 873s The files belonging to this database system will be owned by user "postgres". 873s This user must also own the server process. 873s 873s The database cluster will be initialized with locale "C.UTF-8". 873s The default database encoding has accordingly been set to "UTF8". 873s The default text search configuration will be set to "english". 873s 873s Data page checksums are disabled. 873s 873s fixing permissions on existing directory /var/lib/postgresql/17/main ... ok 874s creating subdirectories ... ok 874s selecting dynamic shared memory implementation ... posix 874s selecting default "max_connections" ... 100 875s selecting default "shared_buffers" ... 128MB 876s selecting default time zone ... Etc/UTC 876s creating configuration files ... ok 879s running bootstrap script ... ok 890s performing post-bootstrap initialization ... ok 890s syncing data to disk ... ok 913s Setting up libcairo2:riscv64 (1.18.2-2) ... 913s Setting up librdkit1t64 (202409.6-2) ... 913s Setting up postgresql-17-rdkit (202409.6-2) ... 913s Setting up python3-rdkit (202409.6-2) ... 924s Setting up librdkit-dev (202409.6-2) ... 924s Processing triggers for man-db (2.13.0-1) ... 932s Processing triggers for libc-bin (2.41-1ubuntu1) ... 951s autopkgtest [10:41:50]: test installcheck: [----------------------- 955s ### PostgreSQL 17 installcheck ### 958s Creating new PostgreSQL cluster 17/regress ... 983s make: Entering directory '/tmp/autopkgtest.8Zz3Oj/build.Y4r/src/Code/PgSQL/rdkit' 985s echo "# +++ regress install-check in +++" && /usr/lib/postgresql/17/lib/pgxs/src/makefiles/../../src/test/regress/pg_regress --inputdir=/tmp/autopkgtest.8Zz3Oj/build.Y4r/src --bindir='/usr/lib/postgresql/17/bin' --dbname=contrib_regression rdkit-91 props btree molgist bfpgist-91 bfpgin sfpgist slfpgist fps reaction fmcs query xqm 985s # +++ regress install-check in +++ 985s # using postmaster on localhost, port 5433 1026s ok 1 - rdkit-91 37791 ms 1028s ok 2 - props 1941 ms 1037s ok 3 - btree 8289 ms 1062s ok 4 - molgist 24685 ms 1063s ok 5 - bfpgist-91 1869 ms 1067s ok 6 - bfpgin 3633 ms 1069s ok 7 - sfpgist 1848 ms 1071s ok 8 - slfpgist 1606 ms 1073s ok 9 - fps 2105 ms 1122s ok 10 - reaction 48719 ms 1130s ok 11 - fmcs 3837 ms 1130s ok 12 - query 1022 ms 1136s ok 13 - xqm 4209 ms 1136s 1..13 1136s # All 13 tests passed. 1136s make: Leaving directory '/tmp/autopkgtest.8Zz3Oj/build.Y4r/src/Code/PgSQL/rdkit' 1136s Dropping cluster 17/regress ... 1136s ### End 17 installcheck ### 1139s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1144s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1148s autopkgtest [10:45:07]: test installcheck: -----------------------] 1177s installcheck PASS 1177s autopkgtest [10:45:36]: test installcheck: - - - - - - - - - - results - - - - - - - - - - 1208s autopkgtest [10:46:07]: test importcheck: preparing testbed 1632s autopkgtest [10:53:11]: testbed dpkg architecture: riscv64 1634s autopkgtest [10:53:13]: testbed apt version: 2.9.32ubuntu1 1638s autopkgtest [10:53:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1639s autopkgtest [10:53:18]: testbed release detected to be: plucky 1646s autopkgtest [10:53:25]: updating testbed package index (apt update) 1649s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 1650s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 1650s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 1650s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 1650s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [396 kB] 1652s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [11.5 kB] 1652s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [43.9 kB] 1652s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main riscv64 Packages [58.5 kB] 1652s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 Packages [330 kB] 1652s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse riscv64 Packages [2516 B] 1657s Fetched 953 kB in 5s (177 kB/s) 1679s Reading package lists... 1686s Reading package lists... 1689s Building dependency tree... 1689s Reading state information... 1691s Calculating upgrade... 1693s Calculating upgrade... 1694s The following packages will be upgraded: 1694s gir1.2-glib-2.0 htop libglib2.0-0t64 libglib2.0-data 1695s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1695s Need to get 2083 kB of archives. 1695s After this operation, 0 B of additional disk space will be used. 1695s Get:1 http://ftpmaster.internal/ubuntu plucky/main riscv64 gir1.2-glib-2.0 riscv64 2.84.0-1 [185 kB] 1695s Get:2 http://ftpmaster.internal/ubuntu plucky/main riscv64 libglib2.0-0t64 riscv64 2.84.0-1 [1680 kB] 1696s Get:3 http://ftpmaster.internal/ubuntu plucky/main riscv64 libglib2.0-data all 2.84.0-1 [53.0 kB] 1696s Get:4 http://ftpmaster.internal/ubuntu plucky/main riscv64 htop riscv64 3.4.0-2 [165 kB] 1703s Fetched 2083 kB in 2s (1160 kB/s) 1705s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75715 files and directories currently installed.) 1705s Preparing to unpack .../gir1.2-glib-2.0_2.84.0-1_riscv64.deb ... 1705s Unpacking gir1.2-glib-2.0:riscv64 (2.84.0-1) over (2.83.5-1) ... 1706s Preparing to unpack .../libglib2.0-0t64_2.84.0-1_riscv64.deb ... 1707s Unpacking libglib2.0-0t64:riscv64 (2.84.0-1) over (2.83.5-1) ... 1708s Preparing to unpack .../libglib2.0-data_2.84.0-1_all.deb ... 1708s Unpacking libglib2.0-data (2.84.0-1) over (2.83.5-1) ... 1709s Preparing to unpack .../htop_3.4.0-2_riscv64.deb ... 1709s Unpacking htop (3.4.0-2) over (3.4.0-1) ... 1710s Setting up htop (3.4.0-2) ... 1710s Setting up libglib2.0-0t64:riscv64 (2.84.0-1) ... 1710s No schema files found: doing nothing. 1710s Setting up libglib2.0-data (2.84.0-1) ... 1710s Setting up gir1.2-glib-2.0:riscv64 (2.84.0-1) ... 1710s Processing triggers for man-db (2.13.0-1) ... 1715s Processing triggers for libc-bin (2.41-1ubuntu1) ... 1724s Reading package lists... 1726s Building dependency tree... 1726s Reading state information... 1728s Solving dependencies... 1730s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1731s autopkgtest [10:54:50]: upgrading testbed (apt dist-upgrade and autopurge) 1733s Reading package lists... 1736s Building dependency tree... 1736s Reading state information... 1739s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1739s Starting 2 pkgProblemResolver with broken count: 0 1739s Done 1746s Entering ResolveByKeep 1748s 1749s Calculating upgrade... 1750s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1753s Reading package lists... 1756s Building dependency tree... 1756s Reading state information... 1758s Starting pkgProblemResolver with broken count: 0 1759s Starting 2 pkgProblemResolver with broken count: 0 1759s Done 1761s Solving dependencies... 1763s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1792s Reading package lists... 1795s Building dependency tree... 1795s Reading state information... 1798s Starting pkgProblemResolver with broken count: 0 1798s Starting 2 pkgProblemResolver with broken count: 0 1798s Done 1802s The following NEW packages will be installed: 1802s fontconfig-config fonts-freefont-ttf libblas3 libboost-iostreams1.83.0 1802s libboost-numpy1.83.0 libboost-python1.83.0 libboost-serialization1.83.0 1802s libcairo2 libcoordgen3 libfontconfig1 libgfortran5 libinchi1.07 1802s libio-pty-perl libipc-run-perl libjs-jquery libjs-underscore libjson-perl 1802s liblapack3 libmaeparser1 libpixman-1-0 libpq5 librdkit-dev librdkit1t64 1802s libxcb-render0 libxcb-shm0 libxrender1 libxslt1.1 postgresql-17 1802s postgresql-17-rdkit postgresql-client-17 postgresql-client-common 1802s postgresql-common postgresql-common-dev python3-numpy python3-numpy-dev 1802s python3-rdkit rdkit-data rdkit-doc ssl-cert 1804s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 1804s Need to get 54.0 MB of archives. 1804s After this operation, 277 MB of additional disk space will be used. 1804s Get:1 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjson-perl all 4.10000-1 [81.9 kB] 1804s Get:2 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-client-common all 274 [47.6 kB] 1804s Get:3 http://ftpmaster.internal/ubuntu plucky/main riscv64 libio-pty-perl riscv64 1:1.20-1build3 [31.6 kB] 1804s Get:4 http://ftpmaster.internal/ubuntu plucky/main riscv64 libipc-run-perl all 20231003.0-2 [91.5 kB] 1804s Get:5 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-common-dev all 274 [73.0 kB] 1804s Get:6 http://ftpmaster.internal/ubuntu plucky/main riscv64 ssl-cert all 1.1.3ubuntu1 [18.7 kB] 1804s Get:7 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-common all 274 [101 kB] 1804s Get:8 http://ftpmaster.internal/ubuntu plucky/main riscv64 python3-numpy-dev riscv64 1:2.2.3+ds-4 [197 kB] 1804s Get:9 http://ftpmaster.internal/ubuntu plucky/main riscv64 libblas3 riscv64 3.12.1-2 [140 kB] 1804s Get:10 http://ftpmaster.internal/ubuntu plucky/main riscv64 libgfortran5 riscv64 15-20250222-0ubuntu1 [499 kB] 1805s Get:11 http://ftpmaster.internal/ubuntu plucky/main riscv64 liblapack3 riscv64 3.12.1-2 [2305 kB] 1805s Get:12 http://ftpmaster.internal/ubuntu plucky/main riscv64 python3-numpy riscv64 1:2.2.3+ds-4 [3856 kB] 1806s Get:13 http://ftpmaster.internal/ubuntu plucky/main riscv64 fonts-freefont-ttf all 20211204+svn4273-2 [5641 kB] 1807s Get:14 http://ftpmaster.internal/ubuntu plucky/main riscv64 fontconfig-config riscv64 2.15.0-2ubuntu1 [37.5 kB] 1807s Get:15 http://ftpmaster.internal/ubuntu plucky/main riscv64 libboost-iostreams1.83.0 riscv64 1.83.0-4.1ubuntu1 [261 kB] 1807s Get:16 http://ftpmaster.internal/ubuntu plucky/main riscv64 libboost-python1.83.0 riscv64 1.83.0-4.1ubuntu1 [328 kB] 1807s Get:17 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libboost-numpy1.83.0 riscv64 1.83.0-4.1ubuntu1 [243 kB] 1808s Get:18 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libboost-serialization1.83.0 riscv64 1.83.0-4.1ubuntu1 [354 kB] 1808s Get:19 http://ftpmaster.internal/ubuntu plucky/main riscv64 libfontconfig1 riscv64 2.15.0-2ubuntu1 [147 kB] 1808s Get:20 http://ftpmaster.internal/ubuntu plucky/main riscv64 libpixman-1-0 riscv64 0.44.0-3 [206 kB] 1808s Get:21 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxcb-render0 riscv64 1.17.0-2 [17.1 kB] 1808s Get:22 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxcb-shm0 riscv64 1.17.0-2 [5950 B] 1808s Get:23 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxrender1 riscv64 1:0.9.10-1.1build1 [20.1 kB] 1808s Get:24 http://ftpmaster.internal/ubuntu plucky/main riscv64 libcairo2 riscv64 1.18.2-2 [612 kB] 1808s Get:25 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libcoordgen3 riscv64 3.0.2-1 [215 kB] 1808s Get:26 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libinchi1.07 riscv64 1.07.3+dfsg-1 [632 kB] 1808s Get:27 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1808s Get:28 http://ftpmaster.internal/ubuntu plucky/main riscv64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 1808s Get:29 http://ftpmaster.internal/ubuntu plucky/universe riscv64 libmaeparser1 riscv64 1.3.1-1build1 [102 kB] 1808s Get:30 http://ftpmaster.internal/ubuntu plucky/main riscv64 libpq5 riscv64 17.4-1 [148 kB] 1808s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 librdkit1t64 riscv64 202409.6-2 [5717 kB] 1809s Get:32 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 librdkit-dev riscv64 202409.6-2 [348 kB] 1810s Get:33 http://ftpmaster.internal/ubuntu plucky/main riscv64 libxslt1.1 riscv64 1.1.39-0exp1ubuntu2 [178 kB] 1810s Get:34 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-client-17 riscv64 17.4-1 [1387 kB] 1810s Get:35 http://ftpmaster.internal/ubuntu plucky/main riscv64 postgresql-17 riscv64 17.4-1 [5505 kB] 1812s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 postgresql-17-rdkit riscv64 202409.6-2 [127 kB] 1812s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 rdkit-data all 202409.6-2 [12.6 MB] 1814s Get:38 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 python3-rdkit riscv64 202409.6-2 [4925 kB] 1815s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/universe riscv64 rdkit-doc all 202409.6-2 [6347 kB] 1826s Preconfiguring packages ... 1828s Fetched 54.0 MB in 14s (3945 kB/s) 1828s Selecting previously unselected package libjson-perl. 1829s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75715 files and directories currently installed.) 1829s Preparing to unpack .../00-libjson-perl_4.10000-1_all.deb ... 1829s Unpacking libjson-perl (4.10000-1) ... 1830s Selecting previously unselected package postgresql-client-common. 1830s Preparing to unpack .../01-postgresql-client-common_274_all.deb ... 1830s Unpacking postgresql-client-common (274) ... 1832s Selecting previously unselected package libio-pty-perl. 1832s Preparing to unpack .../02-libio-pty-perl_1%3a1.20-1build3_riscv64.deb ... 1832s Unpacking libio-pty-perl (1:1.20-1build3) ... 1833s Selecting previously unselected package libipc-run-perl. 1833s Preparing to unpack .../03-libipc-run-perl_20231003.0-2_all.deb ... 1833s Unpacking libipc-run-perl (20231003.0-2) ... 1834s Selecting previously unselected package postgresql-common-dev. 1834s Preparing to unpack .../04-postgresql-common-dev_274_all.deb ... 1834s Unpacking postgresql-common-dev (274) ... 1835s Selecting previously unselected package ssl-cert. 1835s Preparing to unpack .../05-ssl-cert_1.1.3ubuntu1_all.deb ... 1835s Unpacking ssl-cert (1.1.3ubuntu1) ... 1835s Selecting previously unselected package postgresql-common. 1835s Preparing to unpack .../06-postgresql-common_274_all.deb ... 1836s Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common' 1836s Unpacking postgresql-common (274) ... 1837s Selecting previously unselected package python3-numpy-dev:riscv64. 1837s Preparing to unpack .../07-python3-numpy-dev_1%3a2.2.3+ds-4_riscv64.deb ... 1837s Unpacking python3-numpy-dev:riscv64 (1:2.2.3+ds-4) ... 1838s Selecting previously unselected package libblas3:riscv64. 1838s Preparing to unpack .../08-libblas3_3.12.1-2_riscv64.deb ... 1838s Unpacking libblas3:riscv64 (3.12.1-2) ... 1839s Selecting previously unselected package libgfortran5:riscv64. 1839s Preparing to unpack .../09-libgfortran5_15-20250222-0ubuntu1_riscv64.deb ... 1839s Unpacking libgfortran5:riscv64 (15-20250222-0ubuntu1) ... 1840s Selecting previously unselected package liblapack3:riscv64. 1840s Preparing to unpack .../10-liblapack3_3.12.1-2_riscv64.deb ... 1840s Unpacking liblapack3:riscv64 (3.12.1-2) ... 1842s Selecting previously unselected package python3-numpy. 1842s Preparing to unpack .../11-python3-numpy_1%3a2.2.3+ds-4_riscv64.deb ... 1843s Unpacking python3-numpy (1:2.2.3+ds-4) ... 1849s Selecting previously unselected package fonts-freefont-ttf. 1849s Preparing to unpack .../12-fonts-freefont-ttf_20211204+svn4273-2_all.deb ... 1849s Unpacking fonts-freefont-ttf (20211204+svn4273-2) ... 1853s Selecting previously unselected package fontconfig-config. 1853s Preparing to unpack .../13-fontconfig-config_2.15.0-2ubuntu1_riscv64.deb ... 1863s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 1864s Selecting previously unselected package libboost-iostreams1.83.0:riscv64. 1864s Preparing to unpack .../14-libboost-iostreams1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 1864s Unpacking libboost-iostreams1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 1865s Selecting previously unselected package libboost-python1.83.0. 1865s Preparing to unpack .../15-libboost-python1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 1865s Unpacking libboost-python1.83.0 (1.83.0-4.1ubuntu1) ... 1866s Selecting previously unselected package libboost-numpy1.83.0. 1866s Preparing to unpack .../16-libboost-numpy1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 1866s Unpacking libboost-numpy1.83.0 (1.83.0-4.1ubuntu1) ... 1867s Selecting previously unselected package libboost-serialization1.83.0:riscv64. 1867s Preparing to unpack .../17-libboost-serialization1.83.0_1.83.0-4.1ubuntu1_riscv64.deb ... 1868s Unpacking libboost-serialization1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 1869s Selecting previously unselected package libfontconfig1:riscv64. 1869s Preparing to unpack .../18-libfontconfig1_2.15.0-2ubuntu1_riscv64.deb ... 1869s Unpacking libfontconfig1:riscv64 (2.15.0-2ubuntu1) ... 1870s Selecting previously unselected package libpixman-1-0:riscv64. 1870s Preparing to unpack .../19-libpixman-1-0_0.44.0-3_riscv64.deb ... 1870s Unpacking libpixman-1-0:riscv64 (0.44.0-3) ... 1870s Selecting previously unselected package libxcb-render0:riscv64. 1871s Preparing to unpack .../20-libxcb-render0_1.17.0-2_riscv64.deb ... 1871s Unpacking libxcb-render0:riscv64 (1.17.0-2) ... 1871s Selecting previously unselected package libxcb-shm0:riscv64. 1872s Preparing to unpack .../21-libxcb-shm0_1.17.0-2_riscv64.deb ... 1872s Unpacking libxcb-shm0:riscv64 (1.17.0-2) ... 1872s Selecting previously unselected package libxrender1:riscv64. 1872s Preparing to unpack .../22-libxrender1_1%3a0.9.10-1.1build1_riscv64.deb ... 1872s Unpacking libxrender1:riscv64 (1:0.9.10-1.1build1) ... 1873s Selecting previously unselected package libcairo2:riscv64. 1873s Preparing to unpack .../23-libcairo2_1.18.2-2_riscv64.deb ... 1873s Unpacking libcairo2:riscv64 (1.18.2-2) ... 1874s Selecting previously unselected package libcoordgen3:riscv64. 1875s Preparing to unpack .../24-libcoordgen3_3.0.2-1_riscv64.deb ... 1875s Unpacking libcoordgen3:riscv64 (3.0.2-1) ... 1875s Selecting previously unselected package libinchi1.07. 1875s Preparing to unpack .../25-libinchi1.07_1.07.3+dfsg-1_riscv64.deb ... 1875s Unpacking libinchi1.07 (1.07.3+dfsg-1) ... 1876s Selecting previously unselected package libjs-jquery. 1876s Preparing to unpack .../26-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1876s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1877s Selecting previously unselected package libjs-underscore. 1877s Preparing to unpack .../27-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 1877s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 1878s Selecting previously unselected package libmaeparser1:riscv64. 1878s Preparing to unpack .../28-libmaeparser1_1.3.1-1build1_riscv64.deb ... 1878s Unpacking libmaeparser1:riscv64 (1.3.1-1build1) ... 1879s Selecting previously unselected package libpq5:riscv64. 1879s Preparing to unpack .../29-libpq5_17.4-1_riscv64.deb ... 1879s Unpacking libpq5:riscv64 (17.4-1) ... 1880s Selecting previously unselected package librdkit1t64. 1880s Preparing to unpack .../30-librdkit1t64_202409.6-2_riscv64.deb ... 1880s Unpacking librdkit1t64 (202409.6-2) ... 1885s Selecting previously unselected package librdkit-dev. 1885s Preparing to unpack .../31-librdkit-dev_202409.6-2_riscv64.deb ... 1885s Unpacking librdkit-dev (202409.6-2) ... 1887s Selecting previously unselected package libxslt1.1:riscv64. 1887s Preparing to unpack .../32-libxslt1.1_1.1.39-0exp1ubuntu2_riscv64.deb ... 1887s Unpacking libxslt1.1:riscv64 (1.1.39-0exp1ubuntu2) ... 1888s Selecting previously unselected package postgresql-client-17. 1888s Preparing to unpack .../33-postgresql-client-17_17.4-1_riscv64.deb ... 1888s Unpacking postgresql-client-17 (17.4-1) ... 1890s Selecting previously unselected package postgresql-17. 1891s Preparing to unpack .../34-postgresql-17_17.4-1_riscv64.deb ... 1891s Unpacking postgresql-17 (17.4-1) ... 1896s Selecting previously unselected package postgresql-17-rdkit. 1896s Preparing to unpack .../35-postgresql-17-rdkit_202409.6-2_riscv64.deb ... 1896s Unpacking postgresql-17-rdkit (202409.6-2) ... 1897s Selecting previously unselected package rdkit-data. 1897s Preparing to unpack .../36-rdkit-data_202409.6-2_all.deb ... 1897s Unpacking rdkit-data (202409.6-2) ... 1907s Selecting previously unselected package python3-rdkit. 1907s Preparing to unpack .../37-python3-rdkit_202409.6-2_riscv64.deb ... 1907s Unpacking python3-rdkit (202409.6-2) ... 1913s Selecting previously unselected package rdkit-doc. 1913s Preparing to unpack .../38-rdkit-doc_202409.6-2_all.deb ... 1913s Unpacking rdkit-doc (202409.6-2) ... 1936s Setting up postgresql-client-common (274) ... 1936s Setting up libboost-python1.83.0 (1.83.0-4.1ubuntu1) ... 1937s Setting up libpixman-1-0:riscv64 (0.44.0-3) ... 1937s Setting up libxrender1:riscv64 (1:0.9.10-1.1build1) ... 1937s Setting up libio-pty-perl (1:1.20-1build3) ... 1937s Setting up libxcb-render0:riscv64 (1.17.0-2) ... 1937s Setting up libpq5:riscv64 (17.4-1) ... 1937s Setting up fonts-freefont-ttf (20211204+svn4273-2) ... 1937s Setting up libxcb-shm0:riscv64 (1.17.0-2) ... 1937s Setting up rdkit-data (202409.6-2) ... 1937s Setting up libboost-serialization1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 1937s Setting up libboost-numpy1.83.0 (1.83.0-4.1ubuntu1) ... 1937s Setting up libblas3:riscv64 (3.12.1-2) ... 1937s update-alternatives: using /usr/lib/riscv64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/riscv64-linux-gnu/libblas.so.3 (libblas.so.3-riscv64-linux-gnu) in auto mode 1937s Setting up ssl-cert (1.1.3ubuntu1) ... 1951s Created symlink '/etc/systemd/system/multi-user.target.wants/ssl-cert.service' → '/usr/lib/systemd/system/ssl-cert.service'. 1959s Setting up libboost-iostreams1.83.0:riscv64 (1.83.0-4.1ubuntu1) ... 1959s Setting up python3-numpy-dev:riscv64 (1:2.2.3+ds-4) ... 1959s Setting up libipc-run-perl (20231003.0-2) ... 1959s Setting up libgfortran5:riscv64 (15-20250222-0ubuntu1) ... 1959s Setting up libjson-perl (4.10000-1) ... 1959s Setting up libxslt1.1:riscv64 (1.1.39-0exp1ubuntu2) ... 1959s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1960s Setting up libcoordgen3:riscv64 (3.0.2-1) ... 1960s Setting up libinchi1.07 (1.07.3+dfsg-1) ... 1960s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 1960s Setting up postgresql-common-dev (274) ... 1960s Setting up liblapack3:riscv64 (3.12.1-2) ... 1960s update-alternatives: using /usr/lib/riscv64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/riscv64-linux-gnu/liblapack.so.3 (liblapack.so.3-riscv64-linux-gnu) in auto mode 1960s Setting up postgresql-client-17 (17.4-1) ... 1985s update-alternatives: using /usr/share/postgresql/17/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode 1985s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 1996s Setting up rdkit-doc (202409.6-2) ... 1996s Setting up libmaeparser1:riscv64 (1.3.1-1build1) ... 1996s Setting up postgresql-common (274) ... 2010s Creating config file /etc/postgresql-common/createcluster.conf with new version 2016s Building PostgreSQL dictionaries from installed myspell/hunspell packages... 2016s Removing obsolete dictionary files: 2036s Created symlink '/etc/systemd/system/multi-user.target.wants/postgresql.service' → '/usr/lib/systemd/system/postgresql.service'. 2049s Setting up python3-numpy (1:2.2.3+ds-4) ... 2097s Setting up libfontconfig1:riscv64 (2.15.0-2ubuntu1) ... 2097s Setting up postgresql-17 (17.4-1) ... 2134s Creating new PostgreSQL cluster 17/main ... 2134s /usr/lib/postgresql/17/bin/initdb -D /var/lib/postgresql/17/main --auth-local peer --auth-host scram-sha-256 --no-instructions 2135s The files belonging to this database system will be owned by user "postgres". 2135s This user must also own the server process. 2135s 2135s The database cluster will be initialized with locale "C.UTF-8". 2135s The default database encoding has accordingly been set to "UTF8". 2135s The default text search configuration will be set to "english". 2135s 2135s Data page checksums are disabled. 2135s 2135s fixing permissions on existing directory /var/lib/postgresql/17/main ... ok 2135s creating subdirectories ... ok 2135s selecting dynamic shared memory implementation ... posix 2135s selecting default "max_connections" ... 100 2136s selecting default "shared_buffers" ... 128MB 2136s selecting default time zone ... Etc/UTC 2136s creating configuration files ... ok 2141s running bootstrap script ... ok 2152s performing post-bootstrap initialization ... ok 2152s syncing data to disk ... ok 2179s Setting up libcairo2:riscv64 (1.18.2-2) ... 2179s Setting up librdkit1t64 (202409.6-2) ... 2179s Setting up postgresql-17-rdkit (202409.6-2) ... 2179s Setting up python3-rdkit (202409.6-2) ... 2191s Setting up librdkit-dev (202409.6-2) ... 2191s Processing triggers for man-db (2.13.0-1) ... 2199s Processing triggers for libc-bin (2.41-1ubuntu1) ... 2283s autopkgtest [11:04:02]: test importcheck: [----------------------- 2291s autopkgtest [11:04:10]: test importcheck: -----------------------] 2294s autopkgtest [11:04:13]: test importcheck: - - - - - - - - - - results - - - - - - - - - - 2294s importcheck PASS 2297s autopkgtest [11:04:16]: @@@@@@@@@@@@@@@@@@@@ summary 2297s installcheck PASS 2297s importcheck PASS 2331s nova [W] Using flock in prodstack6-riscv64 2331s Creating nova instance adt-plucky-riscv64-rdkit-20250313-102559-juju-7f2275-prod-proposed-migration-environment-20-7d7cfbba-9e83-4c3f-9a3f-9457580d4d17 from image adt/ubuntu-plucky-riscv64-server-20250313.img (UUID bf8f544d-d694-4f5e-94d8-e1965876c8bf)... 2331s nova [W] Timed out waiting for 2c9b09bb-f19b-4feb-8b7c-ab7ac6e07bb4 to get deleted. 2331s nova [W] Using flock in prodstack6-riscv64 2331s Creating nova instance adt-plucky-riscv64-rdkit-20250313-102559-juju-7f2275-prod-proposed-migration-environment-20-7d7cfbba-9e83-4c3f-9a3f-9457580d4d17 from image adt/ubuntu-plucky-riscv64-server-20250313.img (UUID bf8f544d-d694-4f5e-94d8-e1965876c8bf)... 2331s nova [W] Timed out waiting for eafb4b19-93a1-4162-97ef-e52d8af477e3 to get deleted.