0s autopkgtest [23:00:25]: starting date and time: 2024-11-23 23:00:25+0000 0s autopkgtest [23:00:25]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [23:00:25]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.u6_22la0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numcodecs,src:python3-defaults --apt-upgrade zarr --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=numcodecs/0.14.1+ds-1 python3-defaults/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-ppc64el-27.secgroup --name adt-plucky-ppc64el-zarr-20241123-220731-juju-7f2275-prod-proposed-migration-environment-20-c2ce08ef-bd07-4f18-85f9-d80f11e93e11 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 74s autopkgtest [23:01:39]: testbed dpkg architecture: ppc64el 74s autopkgtest [23:01:39]: testbed apt version: 2.9.8 74s autopkgtest [23:01:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 75s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 75s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9704 B] 75s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [908 kB] 75s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.6 kB] 75s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [50.6 kB] 75s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [62.6 kB] 75s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted ppc64el Packages [756 B] 75s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [765 kB] 75s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [9468 B] 76s Fetched 1893 kB in 1s (1994 kB/s) 76s Reading package lists... 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 78s Calculating upgrade... 78s The following package was automatically installed and is no longer required: 78s libsgutils2-1.46-2 78s Use 'sudo apt autoremove' to remove it. 79s The following NEW packages will be installed: 79s libsgutils2-1.48 79s The following packages will be upgraded: 79s bash bpftrace curl debconf debconf-i18n distro-info dracut-install 79s gir1.2-girepository-2.0 gir1.2-glib-2.0 hostname init init-system-helpers 79s libaudit-common libaudit1 libcurl3t64-gnutls libcurl4t64 79s libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data liblzma5 79s libpam-modules libpam-modules-bin libpam-runtime libpam0g libplymouth5 79s libpython3-stdlib libselinux1 libsemanage-common libsemanage2 linux-base 79s lsvpd lxd-installer openssh-client openssh-server openssh-sftp-server 79s pinentry-curses plymouth plymouth-theme-ubuntu-text python3 python3-blinker 79s python3-dbus python3-debconf python3-gi python3-jsonschema-specifications 79s python3-minimal python3-rpds-py python3-yaml sg3-utils sg3-utils-udev 79s vim-common vim-tiny xxd xz-utils 79s 53 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 14.1 MB of archives. 79s After this operation, 3675 kB of additional disk space will be used. 79s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el bash ppc64el 5.2.32-1ubuntu2 [979 kB] 79s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el hostname ppc64el 3.25 [11.3 kB] 79s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el init-system-helpers all 1.67ubuntu1 [39.1 kB] 79s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libaudit-common all 1:4.0.2-2ubuntu1 [6578 B] 79s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el libaudit1 ppc64el 1:4.0.2-2ubuntu1 [59.6 kB] 79s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el debconf-i18n all 1.5.87ubuntu1 [204 kB] 79s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-minimal ppc64el 3.12.7-1 [27.4 kB] 79s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3 ppc64el 3.12.7-1 [24.0 kB] 79s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-stdlib ppc64el 3.12.7-1 [10.0 kB] 79s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-debconf all 1.5.87ubuntu1 [4156 B] 79s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el debconf all 1.5.87ubuntu1 [124 kB] 79s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpam0g ppc64el 1.5.3-7ubuntu4 [76.2 kB] 79s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el libselinux1 ppc64el 3.7-3ubuntu1 [100 kB] 79s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpam-modules-bin ppc64el 1.5.3-7ubuntu4 [57.6 kB] 79s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpam-modules ppc64el 1.5.3-7ubuntu4 [325 kB] 79s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el init ppc64el 1.67ubuntu1 [6432 B] 79s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el openssh-sftp-server ppc64el 1:9.9p1-3ubuntu2 [43.4 kB] 79s Get:18 http://ftpmaster.internal/ubuntu plucky/main ppc64el openssh-server ppc64el 1:9.9p1-3ubuntu2 [680 kB] 79s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el openssh-client ppc64el 1:9.9p1-3ubuntu2 [1169 kB] 79s Get:20 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB] 79s Get:21 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblzma5 ppc64el 5.6.3-1 [172 kB] 79s Get:22 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsemanage-common all 3.7-2build1 [7186 B] 79s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsemanage2 ppc64el 3.7-2build1 [115 kB] 79s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el distro-info ppc64el 1.12 [20.0 kB] 79s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el gir1.2-girepository-2.0 ppc64el 1.82.0-2 [25.3 kB] 79s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el gir1.2-glib-2.0 ppc64el 2.82.2-3 [182 kB] 79s Get:27 http://ftpmaster.internal/ubuntu plucky/main ppc64el libglib2.0-0t64 ppc64el 2.82.2-3 [1787 kB] 79s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgirepository-1.0-1 ppc64el 1.82.0-2 [95.5 kB] 79s Get:29 http://ftpmaster.internal/ubuntu plucky/main ppc64el libglib2.0-data all 2.82.2-3 [51.7 kB] 79s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-dbus ppc64el 1.3.2-5build4 [117 kB] 79s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-gi ppc64el 3.50.0-3build1 [308 kB] 79s Get:32 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-yaml ppc64el 6.0.2-1build1 [180 kB] 79s Get:33 http://ftpmaster.internal/ubuntu plucky/main ppc64el vim-tiny ppc64el 2:9.1.0861-1ubuntu1 [1078 kB] 80s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el vim-common all 2:9.1.0861-1ubuntu1 [395 kB] 80s Get:35 http://ftpmaster.internal/ubuntu plucky/main ppc64el xxd ppc64el 2:9.1.0861-1ubuntu1 [67.9 kB] 80s Get:36 http://ftpmaster.internal/ubuntu plucky/main ppc64el libplymouth5 ppc64el 24.004.60-2ubuntu3 [169 kB] 80s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsgutils2-1.48 ppc64el 1.48-0ubuntu1 [133 kB] 80s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el lsvpd ppc64el 1.7.14-1ubuntu3 [162 kB] 80s Get:39 http://ftpmaster.internal/ubuntu plucky/main ppc64el plymouth-theme-ubuntu-text ppc64el 24.004.60-2ubuntu3 [11.1 kB] 80s Get:40 http://ftpmaster.internal/ubuntu plucky/main ppc64el plymouth ppc64el 24.004.60-2ubuntu3 [152 kB] 80s Get:41 http://ftpmaster.internal/ubuntu plucky/main ppc64el xz-utils ppc64el 5.6.3-1 [280 kB] 80s Get:42 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpftrace ppc64el 0.21.2-2ubuntu3 [1898 kB] 80s Get:43 http://ftpmaster.internal/ubuntu plucky/main ppc64el curl ppc64el 8.9.1-2ubuntu3 [247 kB] 80s Get:44 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcurl4t64 ppc64el 8.9.1-2ubuntu3 [464 kB] 80s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el dracut-install ppc64el 105-2ubuntu2 [38.5 kB] 80s Get:46 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcurl3t64-gnutls ppc64el 8.9.1-2ubuntu3 [461 kB] 80s Get:47 http://ftpmaster.internal/ubuntu plucky/main ppc64el linux-base all 4.10.1ubuntu1 [34.8 kB] 80s Get:48 http://ftpmaster.internal/ubuntu plucky/main ppc64el lxd-installer all 10 [5264 B] 80s Get:49 http://ftpmaster.internal/ubuntu plucky/main ppc64el pinentry-curses ppc64el 1.3.1-0ubuntu2 [43.5 kB] 80s Get:50 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-blinker all 1.9.0-1 [10.7 kB] 80s Get:51 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-rpds-py ppc64el 0.21.0-2ubuntu1 [338 kB] 80s Get:52 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-jsonschema-specifications all 2023.12.1-2 [9116 B] 80s Get:53 http://ftpmaster.internal/ubuntu plucky/main ppc64el sg3-utils ppc64el 1.48-0ubuntu1 [1070 kB] 80s Get:54 http://ftpmaster.internal/ubuntu plucky/main ppc64el sg3-utils-udev all 1.48-0ubuntu1 [6608 B] 80s Preconfiguring packages ... 80s Fetched 14.1 MB in 1s (10.4 MB/s) 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../bash_5.2.32-1ubuntu2_ppc64el.deb ... 81s Unpacking bash (5.2.32-1ubuntu2) over (5.2.32-1ubuntu1) ... 81s Setting up bash (5.2.32-1ubuntu2) ... 81s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../hostname_3.25_ppc64el.deb ... 81s Unpacking hostname (3.25) over (3.23+nmu2ubuntu2) ... 81s Setting up hostname (3.25) ... 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../init-system-helpers_1.67ubuntu1_all.deb ... 81s Unpacking init-system-helpers (1.67ubuntu1) over (1.66ubuntu1) ... 81s Setting up init-system-helpers (1.67ubuntu1) ... 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../libaudit-common_1%3a4.0.2-2ubuntu1_all.deb ... 81s Unpacking libaudit-common (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 81s Setting up libaudit-common (1:4.0.2-2ubuntu1) ... 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../libaudit1_1%3a4.0.2-2ubuntu1_ppc64el.deb ... 81s Unpacking libaudit1:ppc64el (1:4.0.2-2ubuntu1) over (1:4.0.1-1ubuntu2) ... 81s Setting up libaudit1:ppc64el (1:4.0.2-2ubuntu1) ... 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../debconf-i18n_1.5.87ubuntu1_all.deb ... 81s Unpacking debconf-i18n (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 81s Preparing to unpack .../python3-minimal_3.12.7-1_ppc64el.deb ... 81s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 81s Setting up python3-minimal (3.12.7-1) ... 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 81s Preparing to unpack .../python3_3.12.7-1_ppc64el.deb ... 81s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 81s Preparing to unpack .../libpython3-stdlib_3.12.7-1_ppc64el.deb ... 81s Unpacking libpython3-stdlib:ppc64el (3.12.7-1) over (3.12.6-0ubuntu1) ... 81s Preparing to unpack .../python3-debconf_1.5.87ubuntu1_all.deb ... 81s Unpacking python3-debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 81s Preparing to unpack .../debconf_1.5.87ubuntu1_all.deb ... 81s Unpacking debconf (1.5.87ubuntu1) over (1.5.86ubuntu1) ... 81s Setting up debconf (1.5.87ubuntu1) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 82s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_ppc64el.deb ... 82s Unpacking libpam0g:ppc64el (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 82s Setting up libpam0g:ppc64el (1.5.3-7ubuntu4) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 82s Preparing to unpack .../libselinux1_3.7-3ubuntu1_ppc64el.deb ... 82s Unpacking libselinux1:ppc64el (3.7-3ubuntu1) over (3.5-2ubuntu5) ... 82s Setting up libselinux1:ppc64el (3.7-3ubuntu1) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 82s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_ppc64el.deb ... 82s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 82s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ... 82s pam_namespace.service is a disabled or a static unit not running, not starting it. 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 82s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_ppc64el.deb ... 83s Unpacking libpam-modules:ppc64el (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 83s Setting up libpam-modules:ppc64el (1.5.3-7ubuntu4) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73847 files and directories currently installed.) 83s Preparing to unpack .../init_1.67ubuntu1_ppc64el.deb ... 83s Unpacking init (1.67ubuntu1) over (1.66ubuntu1) ... 83s Preparing to unpack .../openssh-sftp-server_1%3a9.9p1-3ubuntu2_ppc64el.deb ... 83s Unpacking openssh-sftp-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 83s Preparing to unpack .../openssh-server_1%3a9.9p1-3ubuntu2_ppc64el.deb ... 83s Unpacking openssh-server (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 83s Preparing to unpack .../openssh-client_1%3a9.9p1-3ubuntu2_ppc64el.deb ... 83s Unpacking openssh-client (1:9.9p1-3ubuntu2) over (1:9.7p1-7ubuntu5) ... 83s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ... 83s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ... 83s Setting up libpam-runtime (1.5.3-7ubuntu4) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73849 files and directories currently installed.) 83s Preparing to unpack .../liblzma5_5.6.3-1_ppc64el.deb ... 83s Unpacking liblzma5:ppc64el (5.6.3-1) over (5.6.2-2) ... 83s Setting up liblzma5:ppc64el (5.6.3-1) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73849 files and directories currently installed.) 83s Preparing to unpack .../libsemanage-common_3.7-2build1_all.deb ... 83s Unpacking libsemanage-common (3.7-2build1) over (3.5-1build6) ... 83s Setting up libsemanage-common (3.7-2build1) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73848 files and directories currently installed.) 83s Preparing to unpack .../libsemanage2_3.7-2build1_ppc64el.deb ... 83s Unpacking libsemanage2:ppc64el (3.7-2build1) over (3.5-1build6) ... 83s Setting up libsemanage2:ppc64el (3.7-2build1) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73848 files and directories currently installed.) 83s Preparing to unpack .../00-distro-info_1.12_ppc64el.deb ... 83s Unpacking distro-info (1.12) over (1.9) ... 83s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_ppc64el.deb ... 83s Unpacking gir1.2-girepository-2.0:ppc64el (1.82.0-2) over (1.80.1-4) ... 83s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_ppc64el.deb ... 83s Unpacking gir1.2-glib-2.0:ppc64el (2.82.2-3) over (2.82.1-0ubuntu1) ... 83s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_ppc64el.deb ... 83s Unpacking libglib2.0-0t64:ppc64el (2.82.2-3) over (2.82.1-0ubuntu1) ... 83s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_ppc64el.deb ... 83s Unpacking libgirepository-1.0-1:ppc64el (1.82.0-2) over (1.80.1-4) ... 83s Preparing to unpack .../05-libglib2.0-data_2.82.2-3_all.deb ... 83s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ... 83s Preparing to unpack .../06-python3-dbus_1.3.2-5build4_ppc64el.deb ... 83s Unpacking python3-dbus (1.3.2-5build4) over (1.3.2-5build3) ... 83s Preparing to unpack .../07-python3-gi_3.50.0-3build1_ppc64el.deb ... 84s Unpacking python3-gi (3.50.0-3build1) over (3.50.0-3) ... 84s Preparing to unpack .../08-python3-yaml_6.0.2-1build1_ppc64el.deb ... 84s Unpacking python3-yaml (6.0.2-1build1) over (6.0.2-1) ... 84s Preparing to unpack .../09-vim-tiny_2%3a9.1.0861-1ubuntu1_ppc64el.deb ... 84s Unpacking vim-tiny (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 84s Preparing to unpack .../10-vim-common_2%3a9.1.0861-1ubuntu1_all.deb ... 84s Unpacking vim-common (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 84s Preparing to unpack .../11-xxd_2%3a9.1.0861-1ubuntu1_ppc64el.deb ... 84s Unpacking xxd (2:9.1.0861-1ubuntu1) over (2:9.1.0777-1ubuntu1) ... 84s Preparing to unpack .../12-libplymouth5_24.004.60-2ubuntu3_ppc64el.deb ... 84s Unpacking libplymouth5:ppc64el (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 84s Selecting previously unselected package libsgutils2-1.48:ppc64el. 84s Preparing to unpack .../13-libsgutils2-1.48_1.48-0ubuntu1_ppc64el.deb ... 84s Unpacking libsgutils2-1.48:ppc64el (1.48-0ubuntu1) ... 84s Preparing to unpack .../14-lsvpd_1.7.14-1ubuntu3_ppc64el.deb ... 84s Unpacking lsvpd (1.7.14-1ubuntu3) over (1.7.14-1ubuntu2) ... 84s Preparing to unpack .../15-plymouth-theme-ubuntu-text_24.004.60-2ubuntu3_ppc64el.deb ... 84s Unpacking plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 84s Preparing to unpack .../16-plymouth_24.004.60-2ubuntu3_ppc64el.deb ... 84s Unpacking plymouth (24.004.60-2ubuntu3) over (24.004.60-1ubuntu11) ... 84s Preparing to unpack .../17-xz-utils_5.6.3-1_ppc64el.deb ... 84s Unpacking xz-utils (5.6.3-1) over (5.6.2-2) ... 84s Preparing to unpack .../18-bpftrace_0.21.2-2ubuntu3_ppc64el.deb ... 84s Unpacking bpftrace (0.21.2-2ubuntu3) over (0.21.2-2ubuntu2) ... 84s Preparing to unpack .../19-curl_8.9.1-2ubuntu3_ppc64el.deb ... 84s Unpacking curl (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 84s Preparing to unpack .../20-libcurl4t64_8.9.1-2ubuntu3_ppc64el.deb ... 84s Unpacking libcurl4t64:ppc64el (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 84s Preparing to unpack .../21-dracut-install_105-2ubuntu2_ppc64el.deb ... 84s Unpacking dracut-install (105-2ubuntu2) over (105-1ubuntu1) ... 84s Preparing to unpack .../22-libcurl3t64-gnutls_8.9.1-2ubuntu3_ppc64el.deb ... 84s Unpacking libcurl3t64-gnutls:ppc64el (8.9.1-2ubuntu3) over (8.9.1-2ubuntu2) ... 84s Preparing to unpack .../23-linux-base_4.10.1ubuntu1_all.deb ... 84s Unpacking linux-base (4.10.1ubuntu1) over (4.5ubuntu9) ... 84s Preparing to unpack .../24-lxd-installer_10_all.deb ... 84s Unpacking lxd-installer (10) over (9) ... 84s Preparing to unpack .../25-pinentry-curses_1.3.1-0ubuntu2_ppc64el.deb ... 84s Unpacking pinentry-curses (1.3.1-0ubuntu2) over (1.2.1-3ubuntu5) ... 84s Preparing to unpack .../26-python3-blinker_1.9.0-1_all.deb ... 84s Unpacking python3-blinker (1.9.0-1) over (1.8.2-1) ... 84s Preparing to unpack .../27-python3-rpds-py_0.21.0-2ubuntu1_ppc64el.deb ... 84s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ... 84s Preparing to unpack .../28-python3-jsonschema-specifications_2023.12.1-2_all.deb ... 84s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ... 84s Preparing to unpack .../29-sg3-utils_1.48-0ubuntu1_ppc64el.deb ... 84s Unpacking sg3-utils (1.48-0ubuntu1) over (1.46-3ubuntu5) ... 85s Preparing to unpack .../30-sg3-utils-udev_1.48-0ubuntu1_all.deb ... 85s Unpacking sg3-utils-udev (1.48-0ubuntu1) over (1.46-3ubuntu5) ... 85s Setting up pinentry-curses (1.3.1-0ubuntu2) ... 85s Setting up distro-info (1.12) ... 85s Setting up linux-base (4.10.1ubuntu1) ... 85s Setting up init (1.67ubuntu1) ... 85s Setting up libcurl4t64:ppc64el (8.9.1-2ubuntu3) ... 85s Setting up bpftrace (0.21.2-2ubuntu3) ... 85s Setting up openssh-client (1:9.9p1-3ubuntu2) ... 85s Setting up libcurl3t64-gnutls:ppc64el (8.9.1-2ubuntu3) ... 85s Setting up libsgutils2-1.48:ppc64el (1.48-0ubuntu1) ... 85s Setting up debconf-i18n (1.5.87ubuntu1) ... 85s Setting up xxd (2:9.1.0861-1ubuntu1) ... 85s Setting up libglib2.0-0t64:ppc64el (2.82.2-3) ... 85s No schema files found: doing nothing. 85s Setting up libglib2.0-data (2.82.2-3) ... 85s Setting up vim-common (2:9.1.0861-1ubuntu1) ... 85s Setting up xz-utils (5.6.3-1) ... 85s Setting up gir1.2-glib-2.0:ppc64el (2.82.2-3) ... 85s Setting up lxd-installer (10) ... 85s Setting up dracut-install (105-2ubuntu2) ... 85s Setting up libplymouth5:ppc64el (24.004.60-2ubuntu3) ... 85s Setting up libgirepository-1.0-1:ppc64el (1.82.0-2) ... 85s Setting up curl (8.9.1-2ubuntu3) ... 85s Setting up libpython3-stdlib:ppc64el (3.12.7-1) ... 85s Setting up sg3-utils (1.48-0ubuntu1) ... 85s Setting up openssh-sftp-server (1:9.9p1-3ubuntu2) ... 85s Setting up openssh-server (1:9.9p1-3ubuntu2) ... 85s Installing new version of config file /etc/ssh/moduli ... 85s Replacing config file /etc/ssh/sshd_config with new version 86s Setting up plymouth (24.004.60-2ubuntu3) ... 86s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 86s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 94s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 94s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 94s Setting up lsvpd (1.7.14-1ubuntu3) ... 94s Setting up python3 (3.12.7-1) ... 95s Setting up vim-tiny (2:9.1.0861-1ubuntu1) ... 95s Setting up sg3-utils-udev (1.48-0ubuntu1) ... 95s update-initramfs: deferring update (trigger activated) 95s Setting up plymouth-theme-ubuntu-text (24.004.60-2ubuntu3) ... 95s update-initramfs: deferring update (trigger activated) 95s Setting up gir1.2-girepository-2.0:ppc64el (1.82.0-2) ... 95s Setting up python3-gi (3.50.0-3build1) ... 95s Setting up python3-rpds-py (0.21.0-2ubuntu1) ... 95s Setting up python3-jsonschema-specifications (2023.12.1-2) ... 95s Setting up python3-blinker (1.9.0-1) ... 95s Setting up python3-dbus (1.3.2-5build4) ... 95s Setting up python3-debconf (1.5.87ubuntu1) ... 95s Setting up python3-yaml (6.0.2-1build1) ... 96s Processing triggers for man-db (2.13.0-1) ... 98s Processing triggers for debianutils (5.21) ... 98s Processing triggers for install-info (7.1.1-1) ... 98s Processing triggers for initramfs-tools (0.142ubuntu35) ... 98s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 98s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 105s Processing triggers for libc-bin (2.40-1ubuntu3) ... 105s Processing triggers for ufw (0.36.2-8) ... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s The following packages will be REMOVED: 105s libsgutils2-1.46-2* 105s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 105s After this operation, 380 kB disk space will be freed. 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73882 files and directories currently installed.) 105s Removing libsgutils2-1.46-2:ppc64el (1.46-3ubuntu5) ... 105s Processing triggers for libc-bin (2.40-1ubuntu3) ... 106s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 106s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [213 kB] 106s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 106s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 106s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [906 kB] 107s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [756 kB] 107s Get:7 http://ftpmaster.internal/ubuntu plucky/universe Sources [20.7 MB] 107s Get:8 http://ftpmaster.internal/ubuntu plucky/universe ppc64el Packages [15.1 MB] 112s Fetched 37.7 MB in 6s (5986 kB/s) 113s Reading package lists... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 113s Calculating upgrade... 113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s autopkgtest [23:02:19]: rebooting testbed after setup commands that affected boot 118s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 145s autopkgtest [23:02:50]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 148s autopkgtest [23:02:53]: @@@@@@@@@@@@@@@@@@@@ apt-source zarr 150s Get:1 http://ftpmaster.internal/ubuntu plucky/universe zarr 2.18.3+ds-1 (dsc) [2647 B] 150s Get:2 http://ftpmaster.internal/ubuntu plucky/universe zarr 2.18.3+ds-1 (tar) [984 kB] 150s Get:3 http://ftpmaster.internal/ubuntu plucky/universe zarr 2.18.3+ds-1 (diff) [5696 B] 150s gpgv: Signature made Sat Sep 7 10:28:17 2024 UTC 150s gpgv: using RSA key 3B70F209A5FFD68903C472C5EBF48AB2578F9812 150s gpgv: issuer "antonio.valentino@tiscali.it" 150s gpgv: Can't check signature: No public key 150s dpkg-source: warning: cannot verify inline signature for ./zarr_2.18.3+ds-1.dsc: no acceptable signature found 150s autopkgtest [23:02:55]: testing package zarr version 2.18.3+ds-1 151s autopkgtest [23:02:56]: build not needed 151s autopkgtest [23:02:56]: test pybuild-autopkgtest: preparing testbed 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s Starting pkgProblemResolver with broken count: 0 153s Starting 2 pkgProblemResolver with broken count: 0 153s Done 153s The following additional packages will be installed: 153s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 153s cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu debhelper debugedit 153s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz g++ 153s g++-14 g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-14 153s gcc-14-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gettext 153s intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 libblosc1 153s libcc1-0 libdebhelper-perl libfile-stripnondeterminism-perl libgcc-14-dev 153s libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libisl23 libitm1 153s libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 153s liblsan0 liblzf1 libmpc3 libpython3.13-minimal libpython3.13-stdlib 153s libquadmath0 libsnappy1v5 libstdc++-14-dev libsz2 libtool libtsan2 libubsan1 153s m4 po-debconf pybuild-plugin-autopkgtest pybuild-plugin-pyproject 153s python3-alabaster python3-all python3-asciitree python3-bs4 python3-build 153s python3-defusedxml python3-docutils python3-fasteners python3-fsspec 153s python3-h5py python3-h5py-serial python3-imagesize python3-iniconfig 153s python3-installer python3-monotonic python3-msgpack python3-numcodecs 153s python3-numpy python3-numpydoc python3-packaging python3-pluggy 153s python3-pydata-sphinx-theme python3-pyproject-hooks python3-pytest 153s python3-pytest-doctestplus python3-pytest-timeout python3-roman 153s python3-setuptools-scm python3-snowballstemmer python3-soupsieve 153s python3-sphinx python3-sphinx-automodapi python3-sphinx-copybutton 153s python3-sphinx-design python3-sphinx-issues python3-tabulate python3-toml 153s python3-wheel python3-zarr python3.13 python3.13-minimal sgml-base 153s sphinx-common xml-core 153s Suggested packages: 153s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 153s cpp-14-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex bison gdb 153s gcc-doc gdb-powerpc64le-linux-gnu gettext-doc libasprintf-dev 153s libgettextpo-dev libstdc++-14-doc libtool-doc gfortran | fortran95-compiler 153s gcj-jdk m4-doc libmail-box-perl python3-pip python3-venv python-build-doc 153s docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french 153s texlive-latex-base texlive-latex-recommended python-fsspec-doc 153s python-h5py-doc python-installer-doc www-browser gfortran python-numpy-doc 153s python3-dev python3-stemmer dvipng dvisvgm fonts-freefont-otf 153s imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc 153s tex-gyre texlive-fonts-extra texlive-fonts-recommended texlive-latex-extra 153s texlive-plain-generic python-sphinx-copybutton-doc jupyter-notebook 153s python3.13-venv python3.13-doc binfmt-support sgml-base-doc 153s Recommended packages: 153s libarchive-cpio-perl javascript-common libjson-xs-perl libltdl-dev 153s libmail-sendmail-perl python3-lxml libpaper-utils python3-pil git 153s python3-dask python3-distributed python3-dropbox python3-fusepy 153s python3-libarchive-c python3-paramiko python3-pygit2 python3-zfpy 153s python3-accessible-pygments python3-pytest-remotedata graphviz 153s The following NEW packages will be installed: 153s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 153s cpp cpp-14 cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu debhelper 153s debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common 153s dwz g++ g++-14 g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc 153s gcc-14 gcc-14-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gettext 153s intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 libblosc1 153s libcc1-0 libdebhelper-perl libfile-stripnondeterminism-perl libgcc-14-dev 153s libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libisl23 libitm1 153s libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 153s liblsan0 liblzf1 libmpc3 libpython3.13-minimal libpython3.13-stdlib 153s libquadmath0 libsnappy1v5 libstdc++-14-dev libsz2 libtool libtsan2 libubsan1 153s m4 po-debconf pybuild-plugin-autopkgtest pybuild-plugin-pyproject 153s python3-alabaster python3-all python3-asciitree python3-bs4 python3-build 153s python3-defusedxml python3-docutils python3-fasteners python3-fsspec 153s python3-h5py python3-h5py-serial python3-imagesize python3-iniconfig 153s python3-installer python3-monotonic python3-msgpack python3-numcodecs 153s python3-numpy python3-numpydoc python3-packaging python3-pluggy 153s python3-pydata-sphinx-theme python3-pyproject-hooks python3-pytest 153s python3-pytest-doctestplus python3-pytest-timeout python3-roman 153s python3-setuptools-scm python3-snowballstemmer python3-soupsieve 153s python3-sphinx python3-sphinx-automodapi python3-sphinx-copybutton 153s python3-sphinx-design python3-sphinx-issues python3-tabulate python3-toml 153s python3-wheel python3-zarr python3.13 python3.13-minimal sgml-base 153s sphinx-common xml-core 153s 0 upgraded, 107 newly installed, 0 to remove and 0 not upgraded. 153s Need to get 85.6 MB/85.7 MB of archives. 153s After this operation, 355 MB of additional disk space will be used. 153s Get:1 /tmp/autopkgtest.4E3yqh/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [928 B] 154s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-minimal ppc64el 3.13.0-2 [881 kB] 154s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-minimal ppc64el 3.13.0-2 [2302 kB] 154s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el sgml-base all 1.31 [11.4 kB] 154s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el m4 ppc64el 1.4.19-4build1 [278 kB] 154s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el autoconf all 2.72-3 [382 kB] 154s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el autotools-dev all 20220109.1 [44.9 kB] 154s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el automake all 1:1.16.5-1.3ubuntu1 [558 kB] 154s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el autopoint all 0.22.5-2 [616 kB] 154s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libisl23 ppc64el 0.27-1 [882 kB] 154s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el libmpc3 ppc64el 1.3.1-1build2 [62.1 kB] 154s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [10.5 MB] 154s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14 ppc64el 14.2.0-8ubuntu1 [1034 B] 154s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [5456 B] 154s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp ppc64el 4:14.1.0-2ubuntu1 [22.5 kB] 154s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcc1-0 ppc64el 14.2.0-8ubuntu1 [48.1 kB] 154s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-8ubuntu1 [161 kB] 154s Get:18 http://ftpmaster.internal/ubuntu plucky/main ppc64el libitm1 ppc64el 14.2.0-8ubuntu1 [31.9 kB] 154s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el libasan8 ppc64el 14.2.0-8ubuntu1 [2945 kB] 154s Get:20 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblsan0 ppc64el 14.2.0-8ubuntu1 [1322 kB] 155s Get:21 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtsan2 ppc64el 14.2.0-8ubuntu1 [2695 kB] 155s Get:22 http://ftpmaster.internal/ubuntu plucky/main ppc64el libubsan1 ppc64el 14.2.0-8ubuntu1 [1191 kB] 155s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el libquadmath0 ppc64el 14.2.0-8ubuntu1 [158 kB] 155s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgcc-14-dev ppc64el 14.2.0-8ubuntu1 [1619 kB] 155s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [20.6 MB] 155s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14 ppc64el 14.2.0-8ubuntu1 [528 kB] 155s Get:27 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [1222 B] 155s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc ppc64el 4:14.1.0-2ubuntu1 [5006 B] 155s Get:29 http://ftpmaster.internal/ubuntu plucky/main ppc64el libstdc++-14-dev ppc64el 14.2.0-8ubuntu1 [2673 kB] 155s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [12.0 MB] 155s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14 ppc64el 14.2.0-8ubuntu1 [19.9 kB] 155s Get:32 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [968 B] 155s Get:33 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++ ppc64el 4:14.1.0-2ubuntu1 [1090 B] 155s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 155s Get:35 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 155s Get:36 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtool all 2.4.7-8 [166 kB] 155s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el dh-autoreconf all 20 [16.1 kB] 155s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] 155s Get:39 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 156s Get:40 http://ftpmaster.internal/ubuntu plucky/main ppc64el dh-strip-nondeterminism all 1.14.0-1 [5058 B] 156s Get:41 http://ftpmaster.internal/ubuntu plucky/main ppc64el debugedit ppc64el 1:5.1-1 [52.1 kB] 156s Get:42 http://ftpmaster.internal/ubuntu plucky/main ppc64el dwz ppc64el 0.15-1build6 [142 kB] 156s Get:43 http://ftpmaster.internal/ubuntu plucky/main ppc64el gettext ppc64el 0.22.5-2 [1082 kB] 156s Get:44 http://ftpmaster.internal/ubuntu plucky/main ppc64el intltool-debian all 0.35.0+20060710.6 [23.2 kB] 156s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el po-debconf all 1.0.21+nmu1 [233 kB] 156s Get:46 http://ftpmaster.internal/ubuntu plucky/main ppc64el debhelper all 13.20ubuntu1 [893 kB] 156s Get:47 http://ftpmaster.internal/ubuntu plucky/universe ppc64el dh-python all 6.20241024 [112 kB] 156s Get:48 http://ftpmaster.internal/ubuntu plucky/main ppc64el xml-core all 0.19 [20.3 kB] 156s Get:49 http://ftpmaster.internal/ubuntu plucky/main ppc64el docutils-common all 0.21.2+dfsg-2 [131 kB] 156s Get:50 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 156s Get:51 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-4 [222 kB] 156s Get:52 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsnappy1v5 ppc64el 1.2.1-1 [33.4 kB] 156s Get:53 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libblosc1 ppc64el 1.21.5+ds-1build1 [38.5 kB] 156s Get:54 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-8ubuntu1 [571 kB] 156s Get:55 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 156s Get:56 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4ubuntu3 [1387 kB] 156s Get:57 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4ubuntu3 [71.2 kB] 156s Get:58 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 156s Get:59 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 156s Get:60 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-sphinxdoc all 7.4.7-4 [158 kB] 156s Get:61 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-perl all 4.10000-1 [81.9 kB] 156s Get:62 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-4 [2814 kB] 156s Get:63 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 156s Get:64 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-stdlib ppc64el 3.13.0-2 [2148 kB] 156s Get:65 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 156s Get:66 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-packaging all 24.2-1 [51.5 kB] 156s Get:67 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 156s Get:68 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-toml all 0.10.2-1 [16.5 kB] 156s Get:69 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-wheel all 0.45.0-1 [57.7 kB] 156s Get:70 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-build all 1.2.2-1 [31.0 kB] 156s Get:71 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 156s Get:72 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pybuild-plugin-pyproject all 6.20241024 [1728 B] 156s Get:73 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13 ppc64el 3.13.0-2 [719 kB] 156s Get:74 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-all ppc64el 3.12.7-1 [888 B] 156s Get:75 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-asciitree all 0.3.3-4 [5644 B] 156s Get:76 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-soupsieve all 2.6-1 [33.0 kB] 156s Get:77 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-bs4 all 4.12.3-3 [109 kB] 156s Get:78 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-defusedxml all 0.7.1-2 [42.0 kB] 156s Get:79 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-roman all 4.2-1 [10.0 kB] 156s Get:80 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-docutils all 0.21.2+dfsg-2 [409 kB] 156s Get:81 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-monotonic all 1.6-2 [5732 B] 156s Get:82 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-fasteners all 0.18-2 [12.5 kB] 156s Get:83 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-fsspec all 2024.9.0-1 [207 kB] 156s Get:84 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11ubuntu1 [5148 kB] 156s Get:85 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py-serial ppc64el 3.11.0-5ubuntu1 [1159 kB] 156s Get:86 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py all 3.11.0-5ubuntu1 [7974 B] 156s Get:87 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-imagesize all 1.4.1-1 [6844 B] 156s Get:88 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 156s Get:89 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-msgpack ppc64el 1.0.3-3build3 [110 kB] 156s Get:90 http://ftpmaster.internal/ubuntu plucky/main ppc64el sphinx-common all 7.4.7-4 [775 kB] 156s Get:91 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-alabaster all 0.7.16-0.1 [18.5 kB] 156s Get:92 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 156s Get:93 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-sphinx all 7.4.7-4 [593 kB] 156s Get:94 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pydata-sphinx-theme all 0.15.4+dfsg-2 [41.5 kB] 156s Get:95 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el python3-numcodecs ppc64el 0.14.1+ds-1 [559 kB] 156s Get:96 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-tabulate all 0.9.0-1 [45.3 kB] 156s Get:97 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-numpydoc all 1.6.0-2 [50.5 kB] 156s Get:98 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 156s Get:99 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pytest all 8.3.3-1 [251 kB] 156s Get:100 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pytest-doctestplus all 1.2.1-2 [23.5 kB] 156s Get:101 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pytest-timeout all 2.3.1-1 [22.1 kB] 156s Get:102 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-setuptools-scm all 8.1.0-1 [32.2 kB] 156s Get:103 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-automodapi all 0.18.0-1 [37.6 kB] 157s Get:104 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-copybutton all 0.5.2-2 [16.6 kB] 157s Get:105 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-design all 0.6.1-1 [894 kB] 157s Get:106 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-issues all 5.0.0-1 [10.2 kB] 157s Get:107 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-zarr all 2.18.3+ds-1 [410 kB] 157s Fetched 85.6 MB in 3s (24.6 MB/s) 157s Selecting previously unselected package libpython3.13-minimal:ppc64el. 158s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73877 files and directories currently installed.) 158s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_ppc64el.deb ... 158s Unpacking libpython3.13-minimal:ppc64el (3.13.0-2) ... 158s Selecting previously unselected package python3.13-minimal. 158s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_ppc64el.deb ... 158s Unpacking python3.13-minimal (3.13.0-2) ... 158s Selecting previously unselected package sgml-base. 158s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 158s Unpacking sgml-base (1.31) ... 158s Selecting previously unselected package m4. 158s Preparing to unpack .../003-m4_1.4.19-4build1_ppc64el.deb ... 158s Unpacking m4 (1.4.19-4build1) ... 158s Selecting previously unselected package autoconf. 158s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 158s Unpacking autoconf (2.72-3) ... 158s Selecting previously unselected package autotools-dev. 158s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 158s Unpacking autotools-dev (20220109.1) ... 158s Selecting previously unselected package automake. 158s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 158s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 158s Selecting previously unselected package autopoint. 158s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 158s Unpacking autopoint (0.22.5-2) ... 158s Selecting previously unselected package libisl23:ppc64el. 158s Preparing to unpack .../008-libisl23_0.27-1_ppc64el.deb ... 158s Unpacking libisl23:ppc64el (0.27-1) ... 158s Selecting previously unselected package libmpc3:ppc64el. 158s Preparing to unpack .../009-libmpc3_1.3.1-1build2_ppc64el.deb ... 158s Unpacking libmpc3:ppc64el (1.3.1-1build2) ... 158s Selecting previously unselected package cpp-14-powerpc64le-linux-gnu. 158s Preparing to unpack .../010-cpp-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking cpp-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package cpp-14. 158s Preparing to unpack .../011-cpp-14_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 158s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 158s Unpacking cpp-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 158s Selecting previously unselected package cpp. 158s Preparing to unpack .../013-cpp_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 158s Unpacking cpp (4:14.1.0-2ubuntu1) ... 158s Selecting previously unselected package libcc1-0:ppc64el. 158s Preparing to unpack .../014-libcc1-0_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libcc1-0:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libgomp1:ppc64el. 158s Preparing to unpack .../015-libgomp1_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libgomp1:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libitm1:ppc64el. 158s Preparing to unpack .../016-libitm1_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libitm1:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libasan8:ppc64el. 158s Preparing to unpack .../017-libasan8_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libasan8:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package liblsan0:ppc64el. 158s Preparing to unpack .../018-liblsan0_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking liblsan0:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libtsan2:ppc64el. 158s Preparing to unpack .../019-libtsan2_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libtsan2:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libubsan1:ppc64el. 158s Preparing to unpack .../020-libubsan1_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libubsan1:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libquadmath0:ppc64el. 158s Preparing to unpack .../021-libquadmath0_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libquadmath0:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package libgcc-14-dev:ppc64el. 158s Preparing to unpack .../022-libgcc-14-dev_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking libgcc-14-dev:ppc64el (14.2.0-8ubuntu1) ... 158s Selecting previously unselected package gcc-14-powerpc64le-linux-gnu. 158s Preparing to unpack .../023-gcc-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 158s Unpacking gcc-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 159s Selecting previously unselected package gcc-14. 159s Preparing to unpack .../024-gcc-14_14.2.0-8ubuntu1_ppc64el.deb ... 159s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 159s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 159s Preparing to unpack .../025-gcc-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 159s Unpacking gcc-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 159s Selecting previously unselected package gcc. 159s Preparing to unpack .../026-gcc_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 159s Unpacking gcc (4:14.1.0-2ubuntu1) ... 159s Selecting previously unselected package libstdc++-14-dev:ppc64el. 159s Preparing to unpack .../027-libstdc++-14-dev_14.2.0-8ubuntu1_ppc64el.deb ... 159s Unpacking libstdc++-14-dev:ppc64el (14.2.0-8ubuntu1) ... 159s Selecting previously unselected package g++-14-powerpc64le-linux-gnu. 159s Preparing to unpack .../028-g++-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 159s Unpacking g++-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 159s Selecting previously unselected package g++-14. 159s Preparing to unpack .../029-g++-14_14.2.0-8ubuntu1_ppc64el.deb ... 159s Unpacking g++-14 (14.2.0-8ubuntu1) ... 159s Selecting previously unselected package g++-powerpc64le-linux-gnu. 159s Preparing to unpack .../030-g++-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 159s Unpacking g++-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 159s Selecting previously unselected package g++. 159s Preparing to unpack .../031-g++_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 159s Unpacking g++ (4:14.1.0-2ubuntu1) ... 159s Selecting previously unselected package build-essential. 159s Preparing to unpack .../032-build-essential_12.10ubuntu1_ppc64el.deb ... 159s Unpacking build-essential (12.10ubuntu1) ... 159s Selecting previously unselected package libdebhelper-perl. 159s Preparing to unpack .../033-libdebhelper-perl_13.20ubuntu1_all.deb ... 159s Unpacking libdebhelper-perl (13.20ubuntu1) ... 159s Selecting previously unselected package libtool. 159s Preparing to unpack .../034-libtool_2.4.7-8_all.deb ... 159s Unpacking libtool (2.4.7-8) ... 159s Selecting previously unselected package dh-autoreconf. 159s Preparing to unpack .../035-dh-autoreconf_20_all.deb ... 159s Unpacking dh-autoreconf (20) ... 159s Selecting previously unselected package libarchive-zip-perl. 159s Preparing to unpack .../036-libarchive-zip-perl_1.68-1_all.deb ... 159s Unpacking libarchive-zip-perl (1.68-1) ... 159s Selecting previously unselected package libfile-stripnondeterminism-perl. 159s Preparing to unpack .../037-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 159s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 159s Selecting previously unselected package dh-strip-nondeterminism. 159s Preparing to unpack .../038-dh-strip-nondeterminism_1.14.0-1_all.deb ... 159s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 159s Selecting previously unselected package debugedit. 159s Preparing to unpack .../039-debugedit_1%3a5.1-1_ppc64el.deb ... 159s Unpacking debugedit (1:5.1-1) ... 159s Selecting previously unselected package dwz. 159s Preparing to unpack .../040-dwz_0.15-1build6_ppc64el.deb ... 159s Unpacking dwz (0.15-1build6) ... 159s Selecting previously unselected package gettext. 159s Preparing to unpack .../041-gettext_0.22.5-2_ppc64el.deb ... 159s Unpacking gettext (0.22.5-2) ... 159s Selecting previously unselected package intltool-debian. 159s Preparing to unpack .../042-intltool-debian_0.35.0+20060710.6_all.deb ... 159s Unpacking intltool-debian (0.35.0+20060710.6) ... 159s Selecting previously unselected package po-debconf. 159s Preparing to unpack .../043-po-debconf_1.0.21+nmu1_all.deb ... 159s Unpacking po-debconf (1.0.21+nmu1) ... 159s Selecting previously unselected package debhelper. 159s Preparing to unpack .../044-debhelper_13.20ubuntu1_all.deb ... 159s Unpacking debhelper (13.20ubuntu1) ... 159s Selecting previously unselected package dh-python. 159s Preparing to unpack .../045-dh-python_6.20241024_all.deb ... 159s Unpacking dh-python (6.20241024) ... 159s Selecting previously unselected package xml-core. 159s Preparing to unpack .../046-xml-core_0.19_all.deb ... 159s Unpacking xml-core (0.19) ... 159s Selecting previously unselected package docutils-common. 159s Preparing to unpack .../047-docutils-common_0.21.2+dfsg-2_all.deb ... 159s Unpacking docutils-common (0.21.2+dfsg-2) ... 159s Selecting previously unselected package libaec0:ppc64el. 159s Preparing to unpack .../048-libaec0_1.1.3-1_ppc64el.deb ... 159s Unpacking libaec0:ppc64el (1.1.3-1) ... 159s Selecting previously unselected package libblas3:ppc64el. 159s Preparing to unpack .../049-libblas3_3.12.0-4_ppc64el.deb ... 159s Unpacking libblas3:ppc64el (3.12.0-4) ... 160s Selecting previously unselected package libsnappy1v5:ppc64el. 160s Preparing to unpack .../050-libsnappy1v5_1.2.1-1_ppc64el.deb ... 160s Unpacking libsnappy1v5:ppc64el (1.2.1-1) ... 160s Selecting previously unselected package libblosc1:ppc64el. 160s Preparing to unpack .../051-libblosc1_1.21.5+ds-1build1_ppc64el.deb ... 160s Unpacking libblosc1:ppc64el (1.21.5+ds-1build1) ... 160s Selecting previously unselected package libgfortran5:ppc64el. 160s Preparing to unpack .../052-libgfortran5_14.2.0-8ubuntu1_ppc64el.deb ... 160s Unpacking libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 160s Selecting previously unselected package libsz2:ppc64el. 160s Preparing to unpack .../053-libsz2_1.1.3-1_ppc64el.deb ... 160s Unpacking libsz2:ppc64el (1.1.3-1) ... 160s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 160s Preparing to unpack .../054-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 160s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 160s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 160s Preparing to unpack .../055-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 160s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 160s Selecting previously unselected package libjs-jquery. 160s Preparing to unpack .../056-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 160s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 160s Selecting previously unselected package libjs-underscore. 160s Preparing to unpack .../057-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 160s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 160s Selecting previously unselected package libjs-sphinxdoc. 160s Preparing to unpack .../058-libjs-sphinxdoc_7.4.7-4_all.deb ... 160s Unpacking libjs-sphinxdoc (7.4.7-4) ... 160s Selecting previously unselected package libjson-perl. 160s Preparing to unpack .../059-libjson-perl_4.10000-1_all.deb ... 160s Unpacking libjson-perl (4.10000-1) ... 160s Selecting previously unselected package liblapack3:ppc64el. 160s Preparing to unpack .../060-liblapack3_3.12.0-4_ppc64el.deb ... 160s Unpacking liblapack3:ppc64el (3.12.0-4) ... 160s Selecting previously unselected package liblzf1:ppc64el. 160s Preparing to unpack .../061-liblzf1_3.6-4_ppc64el.deb ... 160s Unpacking liblzf1:ppc64el (3.6-4) ... 160s Selecting previously unselected package libpython3.13-stdlib:ppc64el. 160s Preparing to unpack .../062-libpython3.13-stdlib_3.13.0-2_ppc64el.deb ... 160s Unpacking libpython3.13-stdlib:ppc64el (3.13.0-2) ... 160s Selecting previously unselected package pybuild-plugin-autopkgtest. 160s Preparing to unpack .../063-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 160s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 160s Selecting previously unselected package python3-packaging. 160s Preparing to unpack .../064-python3-packaging_24.2-1_all.deb ... 160s Unpacking python3-packaging (24.2-1) ... 160s Selecting previously unselected package python3-pyproject-hooks. 160s Preparing to unpack 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pybuild-plugin-pyproject (6.20241024) ... 160s Selecting previously unselected package python3.13. 160s Preparing to unpack .../071-python3.13_3.13.0-2_ppc64el.deb ... 160s Unpacking python3.13 (3.13.0-2) ... 160s Selecting previously unselected package python3-all. 160s Preparing to unpack .../072-python3-all_3.12.7-1_ppc64el.deb ... 160s Unpacking python3-all (3.12.7-1) ... 160s Selecting previously unselected package python3-asciitree. 160s Preparing to unpack .../073-python3-asciitree_0.3.3-4_all.deb ... 160s Unpacking python3-asciitree (0.3.3-4) ... 160s Selecting previously unselected package python3-soupsieve. 160s Preparing to unpack .../074-python3-soupsieve_2.6-1_all.deb ... 160s Unpacking python3-soupsieve (2.6-1) ... 160s Selecting previously unselected package python3-bs4. 160s Preparing to unpack .../075-python3-bs4_4.12.3-3_all.deb ... 160s Unpacking python3-bs4 (4.12.3-3) ... 160s Selecting previously unselected package python3-defusedxml. 160s Preparing to unpack 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python3-msgpack. 161s Preparing to unpack .../087-python3-msgpack_1.0.3-3build3_ppc64el.deb ... 161s Unpacking python3-msgpack (1.0.3-3build3) ... 161s Selecting previously unselected package sphinx-common. 161s Preparing to unpack .../088-sphinx-common_7.4.7-4_all.deb ... 161s Unpacking sphinx-common (7.4.7-4) ... 161s Selecting previously unselected package python3-alabaster. 161s Preparing to unpack .../089-python3-alabaster_0.7.16-0.1_all.deb ... 161s Unpacking python3-alabaster (0.7.16-0.1) ... 161s Selecting previously unselected package python3-snowballstemmer. 161s Preparing to unpack .../090-python3-snowballstemmer_2.2.0-4build1_all.deb ... 161s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 161s Selecting previously unselected package python3-sphinx. 161s Preparing to unpack .../091-python3-sphinx_7.4.7-4_all.deb ... 161s Unpacking python3-sphinx (7.4.7-4) ... 161s Selecting previously unselected package python3-pydata-sphinx-theme. 161s Preparing to unpack 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python3-pytest (8.3.3-1) ... 161s Selecting previously unselected package python3-pytest-doctestplus. 161s Preparing to unpack .../098-python3-pytest-doctestplus_1.2.1-2_all.deb ... 161s Unpacking python3-pytest-doctestplus (1.2.1-2) ... 161s Selecting previously unselected package python3-pytest-timeout. 161s Preparing to unpack .../099-python3-pytest-timeout_2.3.1-1_all.deb ... 161s Unpacking python3-pytest-timeout (2.3.1-1) ... 161s Selecting previously unselected package python3-setuptools-scm. 161s Preparing to unpack .../100-python3-setuptools-scm_8.1.0-1_all.deb ... 161s Unpacking python3-setuptools-scm (8.1.0-1) ... 161s Selecting previously unselected package python3-sphinx-automodapi. 161s Preparing to unpack .../101-python3-sphinx-automodapi_0.18.0-1_all.deb ... 161s Unpacking python3-sphinx-automodapi (0.18.0-1) ... 161s Selecting previously unselected package python3-sphinx-copybutton. 161s Preparing to unpack .../102-python3-sphinx-copybutton_0.5.2-2_all.deb ... 161s 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python3-alabaster (0.7.16-0.1) ... 162s Setting up libdebhelper-perl (13.20ubuntu1) ... 162s Setting up python3-fsspec (2024.9.0-1) ... 163s Setting up python3-tabulate (0.9.0-1) ... 163s Setting up m4 (1.4.19-4build1) ... 163s Setting up libgomp1:ppc64el (14.2.0-8ubuntu1) ... 163s Setting up python3-wheel (0.45.0-1) ... 163s Setting up libaec0:ppc64el (1.1.3-1) ... 163s Setting up libsnappy1v5:ppc64el (1.2.1-1) ... 163s Setting up python3-monotonic (1.6-2) ... 163s Setting up libpython3.13-minimal:ppc64el (3.13.0-2) ... 163s Setting up python3-roman (4.2-1) ... 164s Setting up autotools-dev (20220109.1) ... 164s Setting up libblas3:ppc64el (3.12.0-4) ... 164s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 164s Setting up python3-packaging (24.2-1) ... 164s Setting up python3-pyproject-hooks (1.2.0-1) ... 164s Setting up python3-snowballstemmer 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libtsan2:ppc64el (14.2.0-8ubuntu1) ... 166s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 166s Setting up libisl23:ppc64el (0.27-1) ... 166s Setting up python3-build (1.2.2-1) ... 167s Setting up libpython3.13-stdlib:ppc64el (3.13.0-2) ... 167s Setting up python3-soupsieve (2.6-1) ... 167s Setting up libcc1-0:ppc64el (14.2.0-8ubuntu1) ... 167s Setting up liblsan0:ppc64el (14.2.0-8ubuntu1) ... 167s Setting up libsz2:ppc64el (1.1.3-1) ... 167s Setting up libitm1:ppc64el (14.2.0-8ubuntu1) ... 167s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 167s Setting up python3-imagesize (1.4.1-1) ... 167s Setting up automake (1:1.16.5-1.3ubuntu1) ... 167s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 167s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 167s Setting up liblapack3:ppc64el (3.12.0-4) ... 167s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 167s Setting up gettext (0.22.5-2) ... 167s Setting up python3.13 (3.13.0-2) ... 168s Setting up pybuild-plugin-pyproject (6.20241024) ... 168s Setting up python3-pytest (8.3.3-1) ... 169s Setting up python3-all (3.12.7-1) ... 169s Setting up python3-setuptools-scm (8.1.0-1) ... 169s Setting up python3-bs4 (4.12.3-3) ... 170s Setting up intltool-debian (0.35.0+20060710.6) ... 170s Setting up cpp-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 170s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 174s Setting up libjs-sphinxdoc (7.4.7-4) ... 174s Setting up cpp-14 (14.2.0-8ubuntu1) ... 174s Setting up python3-pytest-doctestplus (1.2.1-2) ... 174s Setting up dh-strip-nondeterminism (1.14.0-1) ... 174s Setting up xml-core (0.19) ... 174s Setting up libgcc-14-dev:ppc64el (14.2.0-8ubuntu1) ... 174s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 174s Setting up libstdc++-14-dev:ppc64el (14.2.0-8ubuntu1) ... 174s Setting up cpp-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 174s Setting up gcc-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 174s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 174s Setting up g++-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 174s Setting up python3-pytest-timeout (2.3.1-1) ... 174s Setting up po-debconf (1.0.21+nmu1) ... 174s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 175s Setting up gcc-14 (14.2.0-8ubuntu1) ... 175s Setting up gcc-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 175s Setting up sphinx-common (7.4.7-4) ... 175s Setting up python3-h5py (3.11.0-5ubuntu1) ... 175s Setting up cpp (4:14.1.0-2ubuntu1) ... 175s Setting up g++-14 (14.2.0-8ubuntu1) ... 175s Setting up g++-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 175s Setting up libtool (2.4.7-8) ... 175s Setting up gcc (4:14.1.0-2ubuntu1) ... 175s Setting up dh-autoreconf (20) ... 175s Setting up g++ (4:14.1.0-2ubuntu1) ... 175s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 175s Setting up build-essential (12.10ubuntu1) ... 175s Setting up debhelper (13.20ubuntu1) ... 175s Setting up pybuild-plugin-autopkgtest (6.20241024) ... 175s Processing triggers for libc-bin (2.40-1ubuntu3) ... 175s Processing triggers for systemd (256.5-2ubuntu4) ... 175s Processing triggers for man-db (2.13.0-1) ... 177s Processing triggers for install-info (7.1.1-1) ... 177s Processing triggers for sgml-base (1.31) ... 177s Setting up docutils-common (0.21.2+dfsg-2) ... 177s Processing triggers for sgml-base (1.31) ... 177s Setting up python3-docutils (0.21.2+dfsg-2) ... 178s Setting up python3-sphinx (7.4.7-4) ... 180s Setting up python3-sphinx-copybutton (0.5.2-2) ... 180s Setting up python3-sphinx-issues (5.0.0-1) ... 180s Setting up python3-sphinx-design (0.6.1-1) ... 180s Setting up python3-numpydoc (1.6.0-2) ... 181s Setting up python3-pydata-sphinx-theme (0.15.4+dfsg-2) ... 181s Setting up python3-sphinx-automodapi (0.18.0-1) ... 181s Setting up python3-numcodecs (0.14.1+ds-1) ... 181s Setting up python3-zarr (2.18.3+ds-1) ... 182s Setting up autopkgtest-satdep (0) ... 186s (Reading database ... 80729 files and directories currently installed.) 186s Removing autopkgtest-satdep (0) ... 186s autopkgtest [23:03:31]: test pybuild-autopkgtest: pybuild-autopkgtest 186s autopkgtest [23:03:31]: test pybuild-autopkgtest: [----------------------- 187s pybuild-autopkgtest 189s I: pybuild base:311: cd /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build; python3.13 -m pytest -k "not test_hierarchy and not test_utf8_encoding and not [static_flat] and not [static_nested] and not [static_flat_legacy] and not [static_nested_legacy] and not test_meta_prefix_6853 and not test_complex and not test_encode_decode_array_dtype_shape_v3" --pyargs zarr 192s ============================= test session starts ============================== 192s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 192s rootdir: /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build 192s configfile: pyproject.toml 192s plugins: doctestplus-1.2.1, timeout-2.3.1, typeguard-4.4.1 192s collected 5174 items / 768 deselected / 4406 selected 192s 192s tests/test_attrs.py .................. 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[100%] 280s 280s ==================================== ERRORS ==================================== 280s ____________ ERROR at setup of TestCopy.test_copy_array[zarr-hdf5] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_zarr_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ____________ ERROR at setup of TestCopy.test_copy_array[hdf5-zarr] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_hdf5_zarr_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ____________ ERROR at setup of TestCopy.test_copy_array[hdf5-hdf5] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_hdf5_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ___________ ERROR at setup of TestCopy.test_copy_bad_dest[zarr-hdf5] ___________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_bad_dest_zarr_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ___________ ERROR at setup of TestCopy.test_copy_bad_dest[hdf5-zarr] ___________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_bad_dest_hdf5_zarr_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ___________ ERROR at setup of TestCopy.test_copy_bad_dest[hdf5-hdf5] ___________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_bad_dest_hdf5_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s __________ ERROR at setup of TestCopy.test_copy_array_name[zarr-hdf5] __________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_name_zarr_hdf50') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s __________ ERROR at setup of TestCopy.test_copy_array_name[hdf5-zarr] __________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_name_hdf5_zarr0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s __________ ERROR at setup of TestCopy.test_copy_array_name[hdf5-hdf5] __________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_name_hdf5_hdf50') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s _____ ERROR at setup of TestCopy.test_copy_array_create_options[zarr-hdf5] _____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_create_options1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s _____ ERROR at setup of TestCopy.test_copy_array_create_options[hdf5-zarr] _____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_create_options2') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s _____ ERROR at setup of TestCopy.test_copy_array_create_options[hdf5-hdf5] _____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_create_options3') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_array[zarr-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_array_z1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_array[hdf5-zarr] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_array_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_array[hdf5-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_array_h1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_group[zarr-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_group_z1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_group[hdf5-zarr] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_group_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_array_exists_group[hdf5-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_exists_group_h1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ____ ERROR at setup of TestCopy.test_copy_array_skip_initialized[zarr-hdf5] ____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_skip_initializ1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ____ ERROR at setup of TestCopy.test_copy_array_skip_initialized[hdf5-zarr] ____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_skip_initializ2') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ____ ERROR at setup of TestCopy.test_copy_array_skip_initialized[hdf5-hdf5] ____ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_array_skip_initializ3') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ____________ ERROR at setup of TestCopy.test_copy_group[zarr-hdf5] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_zarr_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ____________ ERROR at setup of TestCopy.test_copy_group[hdf5-zarr] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_hdf5_zarr_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ____________ ERROR at setup of TestCopy.test_copy_group[hdf5-hdf5] _____________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_hdf5_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_no_name[zarr-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_no_name_zarr_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_no_name[hdf5-zarr] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_no_name_hdf5_z0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_no_name[hdf5-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_no_name_hdf5_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_options[zarr-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_options_zarr_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_options[hdf5-zarr] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_options_hdf5_z0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_options[hdf5-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_options_hdf5_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_shallow[zarr-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_shallow_zarr_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_shallow[hdf5-zarr] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_shallow_hdf5_z0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_shallow[hdf5-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_shallow_hdf5_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_group[zarr-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_group_z1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_group[hdf5-zarr] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_group_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_group[hdf5-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_group_h1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_array[zarr-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_array_z1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_array[hdf5-zarr] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_array_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______ ERROR at setup of TestCopy.test_copy_group_exists_array[hdf5-hdf5] ______ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_exists_array_h1') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_dry_run[zarr-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_dry_run_zarr_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_dry_run[hdf5-zarr] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_dry_run_hdf5_z0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ________ ERROR at setup of TestCopy.test_copy_group_dry_run[hdf5-hdf5] _________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_copy_group_dry_run_hdf5_h0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______________ ERROR at setup of TestCopy.test_logging[zarr-hdf5] ______________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_logging_zarr_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def dest(self, request, tmpdir): 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:735: PytestDeprecationWarning 280s ______________ ERROR at setup of TestCopy.test_logging[hdf5-zarr] ______________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_logging_hdf5_zarr_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s ______________ ERROR at setup of TestCopy.test_logging[hdf5-hdf5] ______________ 280s 280s self = 280s request = > 280s tmpdir = local('/tmp/pytest-of-ubuntu/pytest-0/test_logging_hdf5_hdf5_0') 280s 280s @pytest.fixture(params=[False, True], ids=["zarr", "hdf5"]) 280s def source(self, request, tmpdir): 280s def prep_source(source): 280s foo = source.create_group("foo") 280s foo.attrs["experiment"] = "weird science" 280s baz = foo.create_dataset("bar/baz", data=np.arange(100), chunks=(50,)) 280s baz.attrs["units"] = "metres" 280s if request.param: 280s extra_kws = dict( 280s compression="gzip", 280s compression_opts=3, 280s fillvalue=84, 280s shuffle=True, 280s fletcher32=True, 280s ) 280s else: 280s extra_kws = dict(compressor=Zlib(3), order="F", fill_value=42, filters=[Adler32()]) 280s source.create_dataset( 280s "spam", 280s data=np.arange(100, 200).reshape(20, 5), 280s chunks=(10, 2), 280s dtype="i2", 280s **extra_kws, 280s ) 280s return source 280s 280s if request.param: 280s > h5py = pytest.importorskip("h5py") 280s E pytest.PytestDeprecationWarning: 280s E Module 'h5py' was found, but when imported by pytest it raised: 280s E ImportError("cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py)") 280s E In pytest 9.1 this warning will become an error by default. 280s E You can fix the underlying problem, or alternatively overwrite this behavior and silence this warning by passing exc_type=ImportError explicitly. 280s E See https://docs.pytest.org/en/stable/deprecations.html#pytest-importorskip-default-behavior-regarding-importerror 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_convenience.py:725: PytestDeprecationWarning 280s =================================== FAILURES =================================== 280s _________________________ test_array_with_delta_filter _________________________ 280s 280s def test_array_with_delta_filter(): 280s # setup 280s astype = "u1" 280s dtype = "i8" 280s filters = [Delta(astype=astype, dtype=dtype)] 280s data = np.arange(100, dtype=dtype) 280s 280s for compressor in compressors: 280s > a = array(data, chunks=10, compressor=compressor, filters=filters) 280s 280s /usr/lib/python3/dist-packages/zarr/tests/test_filters.py:40: 280s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 280s /usr/lib/python3/dist-packages/zarr/creation.py:444: in array 280s z[...] = data 280s /usr/lib/python3/dist-packages/zarr/core.py:1449: in __setitem__ 280s self.set_basic_selection(pure_selection, value, fields=fields) 280s /usr/lib/python3/dist-packages/zarr/core.py:1545: in set_basic_selection 280s return self._set_basic_selection_nd(selection, value, fields=fields) 280s /usr/lib/python3/dist-packages/zarr/core.py:1935: in _set_basic_selection_nd 280s self._set_selection(indexer, value, fields=fields) 280s /usr/lib/python3/dist-packages/zarr/core.py:1988: in _set_selection 280s self._chunk_setitem(chunk_coords, chunk_selection, chunk_value, fields=fields) 280s /usr/lib/python3/dist-packages/zarr/core.py:2261: in _chunk_setitem 280s self._chunk_setitem_nosync(chunk_coords, chunk_selection, value, fields=fields) 280s /usr/lib/python3/dist-packages/zarr/core.py:2271: in _chunk_setitem_nosync 280s self.chunk_store[ckey] = self._encode_chunk(cdata) 280s /usr/lib/python3/dist-packages/zarr/core.py:2387: in _encode_chunk 280s chunk = f.encode(chunk) 280s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 280s 280s self = Delta(dtype=' np.subtract(arr[1:], arr[:-1], out=enc[1:]) 280s E numpy.core._exceptions._UFuncOutputCastingError: Cannot cast ufunc 'subtract' output from dtype('int64') to dtype('uint8') with casting rule 'same_kind' 280s 280s /usr/lib/python3/dist-packages/numcodecs/delta.py:70: UFuncTypeError 280s =============================== warnings summary =============================== 280s tests/test_core.py::TestArrayWithDBMStore::test_array_1d 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 355, in 280s chunk_coords = tuple(p.dim_chunk_ix for p in dim_projections) 280s 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_core.py::TestArrayWithDBMStore::test_object_arrays_danger 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 355, in 280s chunk_coords = tuple(p.dim_chunk_ix for p in dim_projections) 280s 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_core.py::TestArrayWithSQLiteStore::test_resize_2d 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 356, in 280s chunk_selection = tuple(p.dim_chunk_sel for p in dim_projections) 280s 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_core.py::TestArrayWithSQLiteStore::test_object_arrays_vlen_text 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 219, in __iter__ 280s dim_chunk_sel = slice(dim_chunk_sel_start, dim_chunk_sel_stop, self.step) 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_core.py::TestArrayWithNoCompressor::test_array_2d 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 357, in 280s out_selection = tuple( 280s 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_core.py::TestArrayWithBZ2Compressor::test_resize_2d 280s /usr/lib/python3/dist-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: 280s 280s Traceback (most recent call last): 280s File "/usr/lib/python3/dist-packages/zarr/indexing.py", line 357, in 280s out_selection = tuple( 280s 280s ResourceWarning: unclosed database in 280s 280s warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 280s 280s tests/test_filters.py::test_array_with_scaleoffset_filter 280s /usr/lib/python3/dist-packages/numcodecs/fixedscaleoffset.py:97: RuntimeWarning: invalid value encountered in cast 280s enc = enc.astype(self.astype, copy=False) 280s 280s tests/test_storage.py::TestZipStore::test_store_and_retrieve_ndarray 280s /usr/lib/python3.13/zipfile/__init__.py:1638: UserWarning: Duplicate name: 'foo' 280s return self._open_to_write(zinfo, force_zip64=force_zip64) 280s 280s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_setitem 280s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_setitem 280s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_append 280s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_append 280s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_create_group 280s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_create_group 280s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_require_group 280s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_require_group 280s /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: This process (pid=3202) is multi-threaded, use of fork() may lead to deadlocks in the child. 280s self.pid = os.fork() 280s 280s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 280s ============================= slowest 10 durations ============================= 280s 11.85s call tests/test_indexing.py::test_set_orthogonal_selection_3d 280s 2.22s call tests/test_storage.py::test_format_compatibility 280s 1.70s call tests/test_core.py::TestArrayWithFSStorePartialRead::test_non_cont 280s 1.49s call tests/test_indexing.py::test_set_orthogonal_selection_2d 280s 1.07s call tests/test_core.py::TestArrayWithSQLiteStore::test_islice 280s 1.04s call tests/test_core.py::TestArrayWithDBMStore::test_object_arrays_vlen_array 280s 1.01s call tests/test_sync.py::TestArrayWithThreadSynchronizer::test_object_arrays_vlen_array 280s 0.99s call tests/test_core.py::TestArrayWithSQLiteStore::test_object_arrays_vlen_array 280s 0.98s call tests/test_sync.py::TestArray::test_object_arrays_vlen_array 280s 0.98s call tests/test_core.py::TestArrayWithStoreCache::test_object_arrays_vlen_array 280s =========================== short test summary info ============================ 280s FAILED tests/test_filters.py::test_array_with_delta_filter - numpy.core._exce... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array[zarr-hdf5] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array[hdf5-zarr] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array[hdf5-hdf5] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_bad_dest[zarr-hdf5] - py... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_bad_dest[hdf5-zarr] - py... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_bad_dest[hdf5-hdf5] - py... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_name[zarr-hdf5] - ... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_name[hdf5-zarr] - ... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_name[hdf5-hdf5] - ... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_create_options[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_create_options[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_create_options[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_array[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_array[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_array[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_group[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_group[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_exists_group[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_skip_initialized[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_skip_initialized[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_array_skip_initialized[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group[zarr-hdf5] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group[hdf5-zarr] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group[hdf5-hdf5] - pytes... 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_no_name[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_no_name[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_no_name[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_options[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_options[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_options[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_shallow[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_shallow[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_shallow[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_group[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_group[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_group[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_array[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_array[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_exists_array[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_dry_run[zarr-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_dry_run[hdf5-zarr] 280s ERROR tests/test_convenience.py::TestCopy::test_copy_group_dry_run[hdf5-hdf5] 280s ERROR tests/test_convenience.py::TestCopy::test_logging[zarr-hdf5] - pytest.P... 280s ERROR tests/test_convenience.py::TestCopy::test_logging[hdf5-zarr] - pytest.P... 280s ERROR tests/test_convenience.py::TestCopy::test_logging[hdf5-hdf5] - pytest.P... 280s = 1 failed, 2205 passed, 2151 skipped, 768 deselected, 4 xfailed, 16 warnings, 45 errors in 91.09s (0:01:31) = 282s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build; python3.13 -m pytest -k "not test_hierarchy and not test_utf8_encoding and not [static_flat] and not [static_nested] and not [static_flat_legacy] and not [static_nested_legacy] and not test_meta_prefix_6853 and not test_complex and not test_encode_decode_array_dtype_shape_v3" --pyargs zarr 282s I: pybuild base:311: cd /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build; python3.12 -m pytest -k "not test_hierarchy and not test_utf8_encoding and not [static_flat] and not [static_nested] and not [static_flat_legacy] and not [static_nested_legacy] and not test_meta_prefix_6853 and not test_complex and not test_encode_decode_array_dtype_shape_v3" --pyargs zarr 285s ============================= test session starts ============================== 285s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 285s rootdir: /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build 285s configfile: pyproject.toml 285s plugins: doctestplus-1.2.1, timeout-2.3.1, typeguard-4.4.1 285s collected 5174 items / 768 deselected / 4406 selected 285s 285s tests/test_attrs.py .................. 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[100%] 362s 362s =================================== FAILURES =================================== 362s _________________________ test_array_with_delta_filter _________________________ 362s 362s def test_array_with_delta_filter(): 362s # setup 362s astype = "u1" 362s dtype = "i8" 362s filters = [Delta(astype=astype, dtype=dtype)] 362s data = np.arange(100, dtype=dtype) 362s 362s for compressor in compressors: 362s > a = array(data, chunks=10, compressor=compressor, filters=filters) 362s 362s /usr/lib/python3/dist-packages/zarr/tests/test_filters.py:40: 362s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 362s /usr/lib/python3/dist-packages/zarr/creation.py:444: in array 362s z[...] = data 362s /usr/lib/python3/dist-packages/zarr/core.py:1449: in __setitem__ 362s self.set_basic_selection(pure_selection, value, fields=fields) 362s /usr/lib/python3/dist-packages/zarr/core.py:1545: in set_basic_selection 362s return self._set_basic_selection_nd(selection, value, fields=fields) 362s /usr/lib/python3/dist-packages/zarr/core.py:1935: in _set_basic_selection_nd 362s self._set_selection(indexer, value, fields=fields) 362s /usr/lib/python3/dist-packages/zarr/core.py:1988: in _set_selection 362s self._chunk_setitem(chunk_coords, chunk_selection, chunk_value, fields=fields) 362s /usr/lib/python3/dist-packages/zarr/core.py:2261: in _chunk_setitem 362s self._chunk_setitem_nosync(chunk_coords, chunk_selection, value, fields=fields) 362s /usr/lib/python3/dist-packages/zarr/core.py:2271: in _chunk_setitem_nosync 362s self.chunk_store[ckey] = self._encode_chunk(cdata) 362s /usr/lib/python3/dist-packages/zarr/core.py:2387: in _encode_chunk 362s chunk = f.encode(chunk) 362s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 362s 362s self = Delta(dtype=' np.subtract(arr[1:], arr[:-1], out=enc[1:]) 362s E numpy.core._exceptions._UFuncOutputCastingError: Cannot cast ufunc 'subtract' output from dtype('int64') to dtype('uint8') with casting rule 'same_kind' 362s 362s /usr/lib/python3/dist-packages/numcodecs/delta.py:70: UFuncTypeError 362s =============================== warnings summary =============================== 362s tests/test_filters.py::test_array_with_scaleoffset_filter 362s /usr/lib/python3/dist-packages/numcodecs/fixedscaleoffset.py:97: RuntimeWarning: invalid value encountered in cast 362s enc = enc.astype(self.astype, copy=False) 362s 362s tests/test_storage.py::TestZipStore::test_store_and_retrieve_ndarray 362s /usr/lib/python3.12/zipfile/__init__.py:1607: UserWarning: Duplicate name: 'foo' 362s return self._open_to_write(zinfo, force_zip64=force_zip64) 362s 362s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_setitem 362s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_setitem 362s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_append 362s tests/test_sync.py::TestArrayWithProcessSynchronizer::test_parallel_append 362s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_create_group 362s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_create_group 362s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_require_group 362s tests/test_sync.py::TestGroupWithProcessSynchronizer::test_parallel_require_group 362s /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=3250) is multi-threaded, use of fork() may lead to deadlocks in the child. 362s self.pid = os.fork() 362s 362s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 362s ============================= slowest 10 durations ============================= 362s 11.47s call tests/test_indexing.py::test_set_orthogonal_selection_3d 362s 1.48s call tests/test_indexing.py::test_set_orthogonal_selection_2d 362s 1.01s call tests/test_core.py::TestArrayWithSQLiteStore::test_object_arrays_vlen_array 362s 0.98s call tests/test_sync.py::TestArrayWithProcessSynchronizer::test_object_arrays_vlen_array 362s 0.96s call tests/test_core.py::TestArrayWithBZ2Compressor::test_object_arrays_vlen_array 362s 0.94s call tests/test_core.py::TestArrayWithSQLiteStore::test_iter 362s 0.93s call tests/test_core.py::TestArrayWithNoCompressor::test_object_arrays_vlen_array 362s 0.92s call tests/test_core.py::TestArrayWithPath::test_object_arrays_vlen_array 362s 0.92s call tests/test_sync.py::TestArray::test_object_arrays_vlen_array 362s 0.92s call tests/test_core.py::TestArrayWithLZMACompressor::test_object_arrays_vlen_array 362s =========================== short test summary info ============================ 362s FAILED tests/test_filters.py::test_array_with_delta_filter - numpy.core._exce... 362s = 1 failed, 2250 passed, 2151 skipped, 768 deselected, 4 xfailed, 10 warnings in 80.03s (0:01:20) = 364s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.4E3yqh/autopkgtest_tmp/build; python3.12 -m pytest -k "not test_hierarchy and not test_utf8_encoding and not [static_flat] and not [static_nested] and not [static_flat_legacy] and not [static_nested_legacy] and not test_meta_prefix_6853 and not test_complex and not test_encode_decode_array_dtype_shape_v3" --pyargs zarr 364s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 364s make: *** [/tmp/Dv4NgqsHOU/run:4: pybuild-autopkgtest] Error 25 364s pybuild-autopkgtest: error: /tmp/Dv4NgqsHOU/run pybuild-autopkgtest returned exit code 2 364s autopkgtest [23:06:29]: test pybuild-autopkgtest: -----------------------] 365s pybuild-autopkgtest FAIL non-zero exit status 25 365s autopkgtest [23:06:30]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 365s autopkgtest [23:06:30]: @@@@@@@@@@@@@@@@@@@@ summary 365s pybuild-autopkgtest FAIL non-zero exit status 25 369s nova [W] Using flock in prodstack6-ppc64el 369s Creating nova instance adt-plucky-ppc64el-zarr-20241123-220731-juju-7f2275-prod-proposed-migration-environment-20-c2ce08ef-bd07-4f18-85f9-d80f11e93e11 from image adt/ubuntu-plucky-ppc64el-server-20241119.img (UUID dcc6a44c-21fb-45bb-821a-d64a8784c175)...