0s autopkgtest [10:10:21]: starting date and time: 2025-02-04 10:10:21+0000
  0s autopkgtest [10:10:21]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [10:10:21]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ghvvsjez/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-31.secgroup --name adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
1007s nova [W] Using flock in prodstack6-ppc64el
1007s Creating nova instance adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b from image adt/ubuntu-plucky-ppc64el-server-20250203.img (UUID 0c217399-b3be-4a44-a7da-172b7e7687e2)...
1007s nova [E] nova boot failed (attempt #0):
1007s nova [E] DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
1007s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
1007s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
1007s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
1007s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://keystone.ps6.canonical.com:5000/v3 -H "Accept: application/json" -H "User-Agent: nova keystoneauth1/4.0.0 python-requests/2.22.0 CPython/3.8.10"
1007s DEBUG (connectionpool:962) Starting new HTTPS connection (1): keystone.ps6.canonical.com:5000
1007s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "GET /v3 HTTP/1.1" 200 267
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 267 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:55 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) Vary: X-Auth-Token x-openstack-request-id: req-de3174c9-f3e6-44d1-b1e3-9da6593d7e64
1007s DEBUG (session:580) RESP BODY: {"version": {"id": "v3.14", "status": "stable", "updated": "2020-04-07T00:00:00Z", "links": [{"rel": "self", "href": "https://keystone.ps6.canonical.com:5000/v3/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.identity-v3+json"}]}}
1007s DEBUG (session:946) GET call to https://keystone.ps6.canonical.com:5000/v3 used request id req-de3174c9-f3e6-44d1-b1e3-9da6593d7e64
1007s DEBUG (base:182) Making authentication request to https://keystone.ps6.canonical.com:5000/v3/auth/tokens
1007s DEBUG (connectionpool:429) https://keystone.ps6.canonical.com:5000 "POST /v3/auth/tokens HTTP/1.1" 201 12525
1007s DEBUG (base:187) {"token": {"methods": ["password"], "user": {"domain": {"id": "default", "name": "Default"}, "id": "c871debdeffd4cb8b69ce618fc4aa361", "name": "prod-proposed-migration-ppc64el", "password_expires_at": null}, "audit_ids": ["etryyYkiSf61OlMM8AKDgA"], "expires_at": "2025-02-05T10:10:56.000000Z", "issued_at": "2025-02-04T10:10:56.000000Z", "project": {"domain": {"id": "default", "name": "Default"}, "id": "623df63b80274c21bc79a0c35e68d615", "name": "prod-proposed-migration-ppc64el_project"}, "is_domain": false, "roles": [{"id": "80674fb26dab46e9a6bd57e7f8193360", "name": "load-balancer_member"}, {"id": "15cf997650e345b7b21c02b5cdb7d84a", "name": "member"}, {"id": "86bf3043974746c2bf52c2a9f362f986", "name": "reader"}], "is_admin_project": false, "catalog": [{"endpoints": [{"id": "213cdf38198c4581bd5b7d6d0836923b", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "67061eee26944a1a8009f9d07be19738", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/", "region": "prodstack6"}, {"id": "fc88c52c749a47d08a24a2c7efbde01b", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/", "region": "prodstack6"}], "id": "06e4714942634054bf9aa11715312b4e", "type": "s3", "name": "s3"}, {"endpoints": [{"id": "8aa44c94b63746bd9b37f1008ad55fa8", "interface": "admin", "region_id": "prodstack6", "url": "https://aodh-admin.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "92cf08a80a0242ebbca8ec893cf332b1", "interface": "public", "region_id": "prodstack6", "url": "https://aodh.ps6.canonical.com:8042", "region": "prodstack6"}, {"id": "d8139c6e11ae4edcb78981c12bd53212", "interface": "internal", "region_id": "prodstack6", "url": "https://aodh-internal.ps6.canonical.com:8042", "region": "prodstack6"}], "id": "2fb939b0b969435c8f0c5fa4edb4de94", "type": "alarming", "name": "aodh"}, {"endpoints": [{"id": "a49fcc80e658411885f88cdd8432a571", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "b23866fddba8415885b06c064c34b94b", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8000/v1", "region": "prodstack6"}, {"id": "f84ae55197f94b8392a678f35c82ca26", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8000/v1", "region": "prodstack6"}], "id": "3d4b59f7dab644b2b527e8e96b697545", "type": "cloudformation", "name": "heat-cfn"}, {"endpoints": [{"id": "2e0143334c6241169f45f1c11970c6bc", "interface": "public", "region_id": "prodstack6", "url": "https://heat.ps6.canonical.com:8004/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "5e19c32243c04a3faf1e5f9ab900c260", "interface": "internal", "region_id": "prodstack6", "url": "https://heat-internal.ps6.canonical.com:8004/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "b3fc5c88ec8543a691fec75726b86967", "interface": "admin", "region_id": "prodstack6", "url": "https://heat-admin.ps6.canonical.com:8004/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}], "id": "43b926205044476b8093b18d8ce0a9e4", "type": "orchestration", "name": "heat"}, {"endpoints": [{"id": "a47569b96e5b4146a312e4673504557c", "interface": "public", "region_id": "prodstack6", "url": "https://glance.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "bba35c4ab04f4114a2a34e65568537bd", "interface": "internal", "region_id": "prodstack6", "url": "https://glance-internal.ps6.canonical.com:9292", "region": "prodstack6"}, {"id": "ef769f1117c74a62a279131486c89628", "interface": "admin", "region_id": "prodstack6", "url": "https://glance-admin.ps6.canonical.com:9292", "region": "prodstack6"}], "id": "49de724549524bd78e9cd46a4477226f", "type": "image", "name": "glance"}, {"endpoints": [{"id": "a1a41e9a1e2d42e5b6cd5380cd1e21bf", "interface": "admin", "region_id": "prodstack6", "url": "https://cinder-admin.ps6.canonical.com:8776/v3/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "d2309a99724b4111827482c68a832c0c", "interface": "public", "region_id": "prodstack6", "url": "https://cinder.ps6.canonical.com:8776/v3/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "f8a02e3949ff42afa772eb5e74dbef9f", "interface": "internal", "region_id": "prodstack6", "url": "https://cinder-internal.ps6.canonical.com:8776/v3/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}], "id": "5bf6578a631349e3af4bf36d7adb18e1", "type": "volumev3", "name": "cinderv3"}, {"endpoints": [{"id": "01d84128f36444e9b01549b86bd69116", "interface": "admin", "region_id": "prodstack6", "url": "https://barbican-admin.ps6.canonical.com:9312", "region": "prodstack6"}, {"id": "0ce4a8777e0b40a88f7fc0f77e34a605", "interface": "public", "region_id": "prodstack6", "url": "https://barbican.ps6.canonical.com:9311", "region": "prodstack6"}, {"id": "f507ba49e4a7435cb330234217c92449", "interface": "internal", "region_id": "prodstack6", "url": "https://barbican-internal.ps6.canonical.com:9311", "region": "prodstack6"}], "id": "62cb1c3d9f6c45979c13516a6b3ff114", "type": "key-manager", "name": "barbican"}, {"endpoints": [{"id": "3cb6121bd8f14da8aa2fba7be823a2b4", "interface": "internal", "region_id": "prodstack6", "url": "https://neutron-internal.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "46ba11d133fe4e8f9e8f9097ba737682", "interface": "admin", "region_id": "prodstack6", "url": "https://neutron-admin.ps6.canonical.com:9696", "region": "prodstack6"}, {"id": "d872eb6aa23d40009165aa3dcdce3948", "interface": "public", "region_id": "prodstack6", "url": "https://neutron.ps6.canonical.com:9696", "region": "prodstack6"}], "id": "759cb6fdfbc146dd8b9d1ba444c4b9db", "type": "network", "name": "neutron"}, {"endpoints": [{"id": "4349d565f72446da9699269f85df5e8b", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v2/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "a483dcc58f5e415e9ec739c94474e609", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v2/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "c1f14236723e42878562d8dd63d5a6a0", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v2/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}], "id": "93fc4008035946deb1f433c2dd905a5d", "type": "sharev2", "name": "manilav2"}, {"endpoints": [{"id": "0fa148793c7249c8b187b6b4ff425731", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "555ade266a6b4bcc81b6e5abf607aec5", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_e4b04ca58d734ed0aa29e306adad4f79/simplestreams/data", "region": "prodstack6"}, {"id": "7dad1a7b1552465686424fc014463173", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift/simplestreams/data", "region": "prodstack6"}], "id": "977dd359af1a4fcc91a9daf4dc33b0f3", "type": "product-streams", "name": "image-stream"}, {"endpoints": [{"id": "12d30eabcdec4831bd15273d55b1cbab", "interface": "internal", "region_id": "prodstack6", "url": "https://manila-internal.ps6.canonical.com:8786/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "29d35b2b483346479f1ff1a13604d50e", "interface": "admin", "region_id": "prodstack6", "url": "https://manila-admin.ps6.canonical.com:8786/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "4aa1422b8f5945d8aed9ba6a8d670e5c", "interface": "public", "region_id": "prodstack6", "url": "https://manila.ps6.canonical.com:8786/v1/623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}], "id": "ac5e4f28fa794cde99f1d7ffc1b664e5", "type": "share", "name": "manila"}, {"endpoints": [{"id": "c7db93d54a684d8caeae1d9e18a59118", "interface": "admin", "region_id": "prodstack6", "url": "https://nova-admin.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "dd7a796f401b477f9f1b5bbc05747d8d", "interface": "public", "region_id": "prodstack6", "url": "https://nova.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}, {"id": "e7ecb038d830462ea67b0b463af5e013", "interface": "internal", "region_id": "prodstack6", "url": "https://nova-internal.ps6.canonical.com:8774/v2.1", "region": "prodstack6"}], "id": "b4519af08e174d4a8333a2d14ac3ba3b", "type": "compute", "name": "nova"}, {"endpoints": [{"id": "02ef5b6154934ffd97d8b5b8e4d70d2a", "interface": "internal", "region_id": "prodstack6", "url": "https://radosgw-internal.ps6.canonical.com:443/swift/v1/AUTH_623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "2741abe526e94842a4fa801423ba1ef0", "interface": "public", "region_id": "prodstack6", "url": "https://radosgw.ps6.canonical.com:443/swift/v1/AUTH_623df63b80274c21bc79a0c35e68d615", "region": "prodstack6"}, {"id": "3742f9406c604516933d6fd8c29e0880", "interface": "admin", "region_id": "prodstack6", "url": "https://radosgw-admin.ps6.canonical.com:443/swift", "region": "prodstack6"}], "id": "c7f07a7b3b3c408c96200dfd1d1a0f6f", "type": "object-store", "name": "swift"}, {"endpoints": [{"id": "06d4ed6c160a43f2b7fa7f80ad1dc709", "interface": "internal", "region_id": "prodstack6", "url": "https://designate-internal.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "1e240624a50c4ca0aaa6ef63cbc94f1b", "interface": "admin", "region_id": "prodstack6", "url": "https://designate-admin.ps6.canonical.com:9001", "region": "prodstack6"}, {"id": "f94d7d17997a43fd9c63b34c43301c6e", "interface": "public", "region_id": "prodstack6", "url": "https://designate.ps6.canonical.com:9001", "region": "prodstack6"}], "id": "cf82013d63844fedbe96bcacb6bd1fef", "type": "dns", "name": "designate"}, {"endpoints": [{"id": "4a688340be464710bfa60bf3f88f41c4", "interface": "admin", "region_id": "prodstack6", "url": "https://gnocchi-admin.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "a5a95506c96d4716adb4efc3ac9051be", "interface": "public", "region_id": "prodstack6", "url": "https://gnocchi.ps6.canonical.com:8041", "region": "prodstack6"}, {"id": "eebc17a086834f8fa8bb6b35c8061a8c", "interface": "internal", "region_id": "prodstack6", "url": "https://gnocchi-internal.ps6.canonical.com:8041", "region": "prodstack6"}], "id": "d10589e854a446a5b852593f33f170a7", "type": "metric", "name": "gnocchi"}, {"endpoints": [{"id": "08f66df28d0f47f3bec12f29e06d85ac", "interface": "admin", "region_id": "prodstack6", "url": "https://keystone-admin.ps6.canonical.com:35357/v3", "region": "prodstack6"}, {"id": "46d270b45ceb42db902f4d241afa6a70", "interface": "public", "region_id": "prodstack6", "url": "https://keystone.ps6.canonical.com:5000/v3", "region": "prodstack6"}, {"id": "a4addee11d9349cfa46ec6660dbad947", "interface": "internal", "region_id": "prodstack6", "url": "https://keystone-internal.ps6.canonical.com:5000/v3", "region": "prodstack6"}], "id": "deb38a775a9b4e87a8de9e3eed779882", "type": "identity", "name": "keystone"}, {"endpoints": [{"id": "18b4af5f40664babb94e884c6a53ccf3", "interface": "admin", "region_id": "prodstack6", "url": "https://octavia-admin.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "2b6f7ba7f9944ee1aebd6dccc5223b2d", "interface": "internal", "region_id": "prodstack6", "url": "https://octavia-internal.ps6.canonical.com:9876", "region": "prodstack6"}, {"id": "5e3012e9c79e4890be4d964b6208f5c6", "interface": "public", "region_id": "prodstack6", "url": "https://octavia.ps6.canonical.com:9876", "region": "prodstack6"}], "id": "e00337be20d54948b66a1c3109b885c6", "type": "load-balancer", "name": "octavia"}, {"endpoints": [{"id": "2d2942b35f3041389ad810f679d02f22", "interface": "public", "region_id": "prodstack6", "url": "https://placement.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "2e3beaac7ac14284b72e2592820ad725", "interface": "admin", "region_id": "prodstack6", "url": "https://placement-admin.ps6.canonical.com:8778", "region": "prodstack6"}, {"id": "91060f6df9ae444f81808adf40540d94", "interface": "internal", "region_id": "prodstack6", "url": "https://placement-internal.ps6.canonical.com:8778", "region": "prodstack6"}], "id": "edc6e37f154f4c0ab3dd4d52b82bf873", "type": "placement", "name": "placement"}]}}
1007s REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949"
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1 -H "Accept: application/json" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949"
1007s DEBUG (connectionpool:962) Starting new HTTPS connection (1): nova.ps6.canonical.com:8774
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1 HTTP/1.1" 302 0
1007s RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Tue, 04 Feb 2025 10:10:56 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-1985ce7a-089e-46c7-b532-7e0ebfc34263 x-openstack-request-id: req-1985ce7a-089e-46c7-b532-7e0ebfc34263
1007s DEBUG (session:548) RESP: [302] Connection: Keep-Alive Content-Length: 0 Content-Type: text/plain; charset=utf8 Date: Tue, 04 Feb 2025 10:10:56 GMT Keep-Alive: timeout=75, max=1000 Location: https://nova.ps6.canonical.com:8774/v2.1/ Server: Apache/2.4.52 (Ubuntu) x-compute-request-id: req-1985ce7a-089e-46c7-b532-7e0ebfc34263 x-openstack-request-id: req-1985ce7a-089e-46c7-b532-7e0ebfc34263
1007s RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
1007s DEBUG (session:580) RESP BODY: Omitted, Content-Type is set to text/plain; charset=utf8. Only application/json responses have their bodies logged.
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/ HTTP/1.1" 200 397
1007s RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:56 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-0d012693-43da-4b29-a454-fd95d41aeb99 x-openstack-request-id: req-0d012693-43da-4b29-a454-fd95d41aeb99
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 397 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:56 GMT Keep-Alive: timeout=75, max=999 OpenStack-API-Version: compute 2.1 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.1 x-compute-request-id: req-0d012693-43da-4b29-a454-fd95d41aeb99 x-openstack-request-id: req-0d012693-43da-4b29-a454-fd95d41aeb99
1007s RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
1007s DEBUG (session:580) RESP BODY: {"version": {"id": "v2.1", "status": "CURRENT", "version": "2.90", "min_version": "2.1", "updated": "2013-07-23T11:33:21Z", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/"}, {"rel": "describedby", "type": "text/html", "href": "http://docs.openstack.org/"}], "media-types": [{"base": "application/json", "type": "application/vnd.openstack.compute+json;version=2.1"}]}}
1007s GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-0d012693-43da-4b29-a454-fd95d41aeb99
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/ used request id req-0d012693-43da-4b29-a454-fd95d41aeb99
1007s DEBUG (extension:189) found extension EntryPoint.parse('v1password = swiftclient.authv1:PasswordLoader')
1007s DEBUG (extension:189) found extension EntryPoint.parse('noauth = cinderclient.contrib.noauth:CinderNoAuthLoader')
1007s DEBUG (extension:189) found extension EntryPoint.parse('admin_token = keystoneauth1.loading._plugins.admin_token:AdminToken')
1007s DEBUG (extension:189) found extension EntryPoint.parse('none = keystoneauth1.loading._plugins.noauth:NoAuth')
1007s DEBUG (extension:189) found extension EntryPoint.parse('password = keystoneauth1.loading._plugins.identity.generic:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('token = keystoneauth1.loading._plugins.identity.generic:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v2password = keystoneauth1.loading._plugins.identity.v2:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v2token = keystoneauth1.loading._plugins.identity.v2:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3adfspassword = keystoneauth1.extras._saml2._loading:ADFSPassword')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3applicationcredential = keystoneauth1.loading._plugins.identity.v3:ApplicationCredential')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3fedkerb = keystoneauth1.extras.kerberos._loading:MappedKerberos')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3kerberos = keystoneauth1.extras.kerberos._loading:Kerberos')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3multifactor = keystoneauth1.loading._plugins.identity.v3:MultiFactor')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oauth1 = keystoneauth1.extras.oauth1._loading:V3OAuth1')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcaccesstoken = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAccessToken')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcauthcode = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectAuthorizationCode')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcclientcredentials = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectClientCredentials')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3oidcpassword = keystoneauth1.loading._plugins.identity.v3:OpenIDConnectPassword')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3password = keystoneauth1.loading._plugins.identity.v3:Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3samlpassword = keystoneauth1.extras._saml2._loading:Saml2Password')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3token = keystoneauth1.loading._plugins.identity.v3:Token')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3tokenlessauth = keystoneauth1.loading._plugins.identity.v3:TokenlessAuth')
1007s DEBUG (extension:189) found extension EntryPoint.parse('v3totp = keystoneauth1.loading._plugins.identity.v3:TOTP')
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps6.canonical.com:9292/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:962) Starting new HTTPS connection (1): glance.ps6.canonical.com:9292
1007s DEBUG (connectionpool:429) https://glance.ps6.canonical.com:9292 "GET /v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 HTTP/1.1" 200 2294
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 2294 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:57 GMT Keep-Alive: timeout=75, max=1000 Server: Apache/2.4.52 (Ubuntu) X-Openstack-Request-Id: req-6e90c9aa-b759-492d-8d31-eea000cfdf0b
1007s DEBUG (session:580) RESP BODY: {"architecture": "ppc64le", "base_image_ref": "75c910fb-86d3-481a-a4b6-c4670f38d780", "boot_roles": "load-balancer_member,member,reader", "content_id": "auto.sync", "hw_cdrom_bus": "scsi", "hw_disk_bus": "virtio", "hw_machine_type": "pseries", "hw_video_model": "vga", "hw_vif_model": "virtio", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "4840d4e5-05c8-4316-9415-15e59ac08db8", "item_name": "disk1.img", "os_distro": "ubuntu", "os_version": "25.04", "owner_id": "623df63b80274c21bc79a0c35e68d615", "owner_project_name": "prod-proposed-migration-ppc64el_project", "owner_user_name": "prod-proposed-migration-ppc64el", "product_name": "com.ubuntu.cloud.daily:server:25.04:ppc64el", "simplestreams_metadata": "{\"aliases\": \"25.04,p,plucky,devel\", \"arch\": \"ppc64el\", \"ftype\": \"disk1.img\", \"label\": \"daily\", \"md5\": \"75cf4ebffa6ce75c5396564290b6a8f7\", \"os\": \"ubuntu\", \"pubname\": \"ubuntu-plucky-daily-ppc64el-server-20250113\", \"release\": \"plucky\", \"release_codename\": \"P", "source_content_id": "com.ubuntu.cloud:daily:download", "user_id": "c871debdeffd4cb8b69ce618fc4aa361", "version_name": "20250113", "name": "adt/ubuntu-plucky-ppc64el-server-20250203.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 3122659328, "virtual_size": 21474836480, "status": "active", "checksum": "6503eff206bf069cfe6bff0b413e65a2", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "623df63b80274c21bc79a0c35e68d615", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "8ed719776ff55adedeea2a76c9959872978b987471534bb46df454737e389e322a67e449ed21e6214fb862a6840eb5bc4819dd9f8939cb8b899947db647d828d", "id": "0c217399-b3be-4a44-a7da-172b7e7687e2", "created_at": "2025-02-03T09:57:52Z", "updated_at": "2025-02-03T09:58:31Z", "locations": [{"url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/0c217399-b3be-4a44-a7da-172b7e7687e2/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/0c217399-b3be-4a44-a7da-172b7e7687e2/snap", "tags": [], "self": "/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2", "file": "/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2/file", "schema": "/v2/schemas/image", "stores": "ceph"}
1007s DEBUG (session:936) GET call to image for https://glance.ps6.canonical.com:9292/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 used request id req-6e90c9aa-b759-492d-8d31-eea000cfdf0b
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest-ppc64el -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/autopkgtest-ppc64el HTTP/1.1" 404 92
1007s DEBUG (session:548) RESP: [404] Connection: Keep-Alive Content-Length: 92 Content-Type: application/json; charset=UTF-8 Date: Tue, 04 Feb 2025 10:10:57 GMT Keep-Alive: timeout=75, max=998 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-12ed54b3-9005-4f13-9f00-9a267b42fe6c x-openstack-request-id: req-12ed54b3-9005-4f13-9f00-9a267b42fe6c
1007s DEBUG (session:580) RESP BODY: {"itemNotFound": {"code": 404, "message": "Flavor autopkgtest-ppc64el could not be found."}}
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/autopkgtest-ppc64el used request id req-12ed54b3-9005-4f13-9f00-9a267b42fe6c
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors?is_public=None HTTP/1.1" 200 39839
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 39839 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:57 GMT Keep-Alive: timeout=75, max=997 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-dd2bdb67-26b9-4b14-84ae-4cb4b5576559 x-openstack-request-id: req-dd2bdb67-26b9-4b14-84ae-4cb4b5576559
1007s DEBUG (session:580) RESP BODY: {"flavors": [{"id": "05338e57-e2ba-4813-9a8a-2f2af73f8ab2", "name": "builder-ppc64el-cpu2-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/05338e57-e2ba-4813-9a8a-2f2af73f8ab2"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/05338e57-e2ba-4813-9a8a-2f2af73f8ab2"}], "description": null}, {"id": "08090b4b-98a9-4c15-8ad4-cc6711700879", "name": "builder-ppc64el-cpu8-ram64-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/08090b4b-98a9-4c15-8ad4-cc6711700879"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/08090b4b-98a9-4c15-8ad4-cc6711700879"}], "description": null}, {"id": "0825b8b1-2b9c-42bf-b3e6-e827c22d8df5", "name": "builder-ppc64el-cpu8-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/0825b8b1-2b9c-42bf-b3e6-e827c22d8df5"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/0825b8b1-2b9c-42bf-b3e6-e827c22d8df5"}], "description": null}, {"id": "0b06db45-151e-44b2-b0f5-f069ad7fa1cb", "name": "builder-ppc64el-cpu2-ram12-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/0b06db45-151e-44b2-b0f5-f069ad7fa1cb"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/0b06db45-151e-44b2-b0f5-f069ad7fa1cb"}], "description": null}, {"id": "0dbf127e-3101-4f05-9d37-15ad6d2a45c1", "name": "builder-ppc64el-cpu2-ram16-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/0dbf127e-3101-4f05-9d37-15ad6d2a45c1"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/0dbf127e-3101-4f05-9d37-15ad6d2a45c1"}], "description": null}, {"id": "102d0b57-e8d2-46c6-9be4-f452119a0280", "name": "autopkgtest-ppc64el", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280"}], "description": null}, {"id": "1219f5f0-83f3-4d33-a3bb-1a85c6303159", "name": "builder-ppc64el-cpu128-ram64-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/1219f5f0-83f3-4d33-a3bb-1a85c6303159"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/1219f5f0-83f3-4d33-a3bb-1a85c6303159"}], "description": null}, {"id": "1359c5a4-ee60-4855-9bcc-defd3bff7121", "name": "builder-ppc64el-cpu8-ram8-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/1359c5a4-ee60-4855-9bcc-defd3bff7121"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/1359c5a4-ee60-4855-9bcc-defd3bff7121"}], "description": null}, {"id": "161f21bc-11f7-4ec9-a322-04fc3e0d2a68", "name": "builder-ppc64el-cpu2-ram55-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/161f21bc-11f7-4ec9-a322-04fc3e0d2a68"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/161f21bc-11f7-4ec9-a322-04fc3e0d2a68"}], "description": null}, {"id": "166070cd-7110-473e-a6a2-5e25aa9eeefd", "name": "builder-ppc64el-cpu4-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/166070cd-7110-473e-a6a2-5e25aa9eeefd"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/166070cd-7110-473e-a6a2-5e25aa9eeefd"}], "description": null}, {"id": "16a0a259-4627-4fbd-bb9d-a3e69346467c", "name": "builder-ppc64el-cpu8-ram64-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/16a0a259-4627-4fbd-bb9d-a3e69346467c"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/16a0a259-4627-4fbd-bb9d-a3e69346467c"}], "description": null}, {"id": "1c59e50a-1a67-4691-8f2c-6954cb0f83ba", "name": "builder-ppc64el-cpu4-ram128-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/1c59e50a-1a67-4691-8f2c-6954cb0f83ba"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/1c59e50a-1a67-4691-8f2c-6954cb0f83ba"}], "description": null}, {"id": "1c94efa8-905a-4bff-8485-0aaf9ac47fe7", "name": "builder-ppc64el-cpu4-ram16-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/1c94efa8-905a-4bff-8485-0aaf9ac47fe7"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/1c94efa8-905a-4bff-8485-0aaf9ac47fe7"}], "description": null}, {"id": "213c954d-26ed-4c86-9592-66384bc22c82", "name": "builder-ppc64el-cpu4-ram16-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/213c954d-26ed-4c86-9592-66384bc22c82"}, {"rel": "bookmark", "href": 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"https://nova.ps6.canonical.com:8774/flavors/e628d527-f077-426d-9380-5eea778aabc2"}], "description": null}, {"id": "e752e039-cbe4-4a16-8197-de87ba42b83e", "name": "builder-ppc64el-cpu64-ram256-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/e752e039-cbe4-4a16-8197-de87ba42b83e"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/e752e039-cbe4-4a16-8197-de87ba42b83e"}], "description": null}, {"id": "e7f811c8-a60c-45c6-86c8-8e4b025751df", "name": "builder-ppc64el-cpu4-ram16-disk40", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/e7f811c8-a60c-45c6-86c8-8e4b025751df"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/e7f811c8-a60c-45c6-86c8-8e4b025751df"}], "description": null}, {"id": "eb80d7e2-b6e1-42a5-b80d-3dad861f6989", "name": "builder-ppc64el-cpu16-ram4-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/eb80d7e2-b6e1-42a5-b80d-3dad861f6989"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/eb80d7e2-b6e1-42a5-b80d-3dad861f6989"}], "description": null}, {"id": "ed127e2b-02b8-4e61-bf10-0c89b90928e6", "name": "builder-ppc64el-cpu64-ram128-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/ed127e2b-02b8-4e61-bf10-0c89b90928e6"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/ed127e2b-02b8-4e61-bf10-0c89b90928e6"}], "description": null}, {"id": "ef7301a7-71f4-48ac-b387-23251f4060e1", "name": "builder-ppc64el-cpu16-ram8-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/ef7301a7-71f4-48ac-b387-23251f4060e1"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/ef7301a7-71f4-48ac-b387-23251f4060e1"}], "description": null}, {"id": "f0f1af4d-f230-40c1-b789-c94e02a68daa", "name": "builder-ppc64el-cpu16-ram8-disk20", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/f0f1af4d-f230-40c1-b789-c94e02a68daa"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/f0f1af4d-f230-40c1-b789-c94e02a68daa"}], "description": null}, {"id": "f40b2dbc-5d69-40b0-a9fc-71c32de93ca3", "name": "autopkgtest-big-ppc64el", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/f40b2dbc-5d69-40b0-a9fc-71c32de93ca3"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/f40b2dbc-5d69-40b0-a9fc-71c32de93ca3"}], "description": null}, {"id": "f6aae414-e26b-4692-95d4-d851b6993c2a", "name": "builder-ppc64el-cpu2-ram8-disk50", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/f6aae414-e26b-4692-95d4-d851b6993c2a"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/f6aae414-e26b-4692-95d4-d851b6993c2a"}], "description": null}, {"id": "f91b245b-ad92-47f6-8861-d1e070fcc19c", "name": "builder-ppc64el-cpu2-ram64-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/f91b245b-ad92-47f6-8861-d1e070fcc19c"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/f91b245b-ad92-47f6-8861-d1e070fcc19c"}], "description": null}, {"id": "fa3bbba4-5e72-4ca3-9661-ccf45947bbf5", "name": "builder-ppc64el-cpu16-ram4-disk100", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/fa3bbba4-5e72-4ca3-9661-ccf45947bbf5"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/fa3bbba4-5e72-4ca3-9661-ccf45947bbf5"}], "description": null}, {"id": "ff4cf1ee-6e00-49b7-9d11-fafa69b910df", "name": "builder-ppc64el-cpu8-ram32-disk40", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/ff4cf1ee-6e00-49b7-9d11-fafa69b910df"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/ff4cf1ee-6e00-49b7-9d11-fafa69b910df"}], "description": null}]}
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors?is_public=None used request id req-dd2bdb67-26b9-4b14-84ae-4cb4b5576559
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280 HTTP/1.1" 200 623
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 623 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:57 GMT Keep-Alive: timeout=75, max=996 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-62cefe96-bc0b-4d37-848e-bc0bcbe724aa x-openstack-request-id: req-62cefe96-bc0b-4d37-848e-bc0bcbe724aa
1007s DEBUG (session:580) RESP BODY: {"flavor": {"id": "102d0b57-e8d2-46c6-9be4-f452119a0280", "name": "autopkgtest-ppc64el", "ram": 4096, "disk": 20, "swap": 0, "OS-FLV-EXT-DATA:ephemeral": 0, "OS-FLV-DISABLED:disabled": false, "vcpus": 2, "os-flavor-access:is_public": false, "rxtx_factor": 1.0, "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280"}], "description": null, "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-ppc64el", "hw_rng:allowed": "True"}}}
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/flavors/102d0b57-e8d2-46c6-9be4-f452119a0280 used request id req-62cefe96-bc0b-4d37-848e-bc0bcbe724aa
1007s DEBUG (session:517) REQ: curl -g -i -X POST https://nova.ps6.canonical.com:8774/v2.1/servers -H "Accept: application/json" -H "Content-Type: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87" -d '{"server": {"name": "adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b", "imageRef": "0c217399-b3be-4a44-a7da-172b7e7687e2", "flavorRef": "102d0b57-e8d2-46c6-9be4-f452119a0280", "user_data": "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", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-15", "min_count": 1, "max_count": 1, "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-31.secgroup"}], "networks": [{"uuid": "3083d638-5564-4f5c-97ef-09f045123d20"}]}}'
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "POST /v2.1/servers HTTP/1.1" 202 479
1007s DEBUG (session:548) RESP: [202] Connection: Keep-Alive Content-Length: 479 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:57 GMT Keep-Alive: timeout=75, max=995 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 location: https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed x-compute-request-id: req-061763c1-a170-44ff-ae80-3034e2384759 x-openstack-request-id: req-061763c1-a170-44ff-ae80-3034e2384759
1007s DEBUG (session:580) RESP BODY: {"server": {"id": "9d5458ff-d098-40e9-a9d8-69c16dd4f7ed", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}], "OS-DCF:diskConfig": "MANUAL", "security_groups": [{"name": "autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-31.secgroup"}], "adminPass": "RvhmGqhW697d"}}
1007s DEBUG (session:936) POST call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers used request id req-061763c1-a170-44ff-ae80-3034e2384759
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed HTTP/1.1" 200 3240
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 3240 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:58 GMT Keep-Alive: timeout=75, max=994 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-c5818990-9d37-457e-a902-257bbbf8affa x-openstack-request-id: req-c5818990-9d37-457e-a902-257bbbf8affa
1007s DEBUG (session:580) RESP BODY: {"server": {"id": "9d5458ff-d098-40e9-a9d8-69c16dd4f7ed", "name": "adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b", "status": "BUILD", "tenant_id": "623df63b80274c21bc79a0c35e68d615", "user_id": "c871debdeffd4cb8b69ce618fc4aa361", "metadata": {}, "hostId": "", "image": {"id": "0c217399-b3be-4a44-a7da-172b7e7687e2", "links": [{"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/images/0c217399-b3be-4a44-a7da-172b7e7687e2"}]}, "flavor": {"vcpus": 2, "ram": 4096, "disk": 20, "ephemeral": 0, "swap": 0, "original_name": "autopkgtest-ppc64el", "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-ppc64el", "hw_rng:allowed": "True"}}, "created": "2025-02-04T10:10:58Z", "updated": "2025-02-04T10:10:58Z", "addresses": {}, "accessIPv4": "", "accessIPv6": "", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}], "OS-DCF:diskConfig": "MANUAL", "progress": 0, "OS-EXT-AZ:availability_zone": "", "config_drive": "", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-15", "OS-SRV-USG:launched_at": null, "OS-SRV-USG:terminated_at": null, "OS-EXT-SRV-ATTR:host": null, "OS-EXT-SRV-ATTR:instance_name": "", "OS-EXT-SRV-ATTR:hypervisor_hostname": null, "OS-EXT-SRV-ATTR:reservation_id": "r-p7582qaj", "OS-EXT-SRV-ATTR:launch_index": 0, "OS-EXT-SRV-ATTR:hostname": "adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-pro", "OS-EXT-SRV-ATTR:kernel_id": "", "OS-EXT-SRV-ATTR:ramdisk_id": "", "OS-EXT-SRV-ATTR:root_device_name": null, "OS-EXT-SRV-ATTR:user_data": "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", "OS-EXT-STS:task_state": "scheduling", "OS-EXT-STS:vm_state": "building", "OS-EXT-STS:power_state": 0, "os-extended-volumes:volumes_attached": [], "locked": false, "locked_reason": null, "description": null, "tags": [], "trusted_image_certificates": null, "server_groups": []}}
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed used request id req-c5818990-9d37-457e-a902-257bbbf8affa
1007s DEBUG (session:517) REQ: curl -g -i -X GET https://glance.ps6.canonical.com:9292/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://glance.ps6.canonical.com:9292 "GET /v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 HTTP/1.1" 200 2294
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 2294 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:58 GMT Keep-Alive: timeout=75, max=999 Server: Apache/2.4.52 (Ubuntu) X-Openstack-Request-Id: req-c0fe59a8-24f8-490a-ac1b-9e4b31ae346e
1007s DEBUG (session:580) RESP BODY: {"architecture": "ppc64le", "base_image_ref": "75c910fb-86d3-481a-a4b6-c4670f38d780", "boot_roles": "load-balancer_member,member,reader", "content_id": "auto.sync", "hw_cdrom_bus": "scsi", "hw_disk_bus": "virtio", "hw_machine_type": "pseries", "hw_video_model": "vga", "hw_vif_model": "virtio", "image_location": "snapshot", "image_state": "available", "image_type": "snapshot", "instance_uuid": "4840d4e5-05c8-4316-9415-15e59ac08db8", "item_name": "disk1.img", "os_distro": "ubuntu", "os_version": "25.04", "owner_id": "623df63b80274c21bc79a0c35e68d615", "owner_project_name": "prod-proposed-migration-ppc64el_project", "owner_user_name": "prod-proposed-migration-ppc64el", "product_name": "com.ubuntu.cloud.daily:server:25.04:ppc64el", "simplestreams_metadata": "{\"aliases\": \"25.04,p,plucky,devel\", \"arch\": \"ppc64el\", \"ftype\": \"disk1.img\", \"label\": \"daily\", \"md5\": \"75cf4ebffa6ce75c5396564290b6a8f7\", \"os\": \"ubuntu\", \"pubname\": \"ubuntu-plucky-daily-ppc64el-server-20250113\", \"release\": \"plucky\", \"release_codename\": \"P", "source_content_id": "com.ubuntu.cloud:daily:download", "user_id": "c871debdeffd4cb8b69ce618fc4aa361", "version_name": "20250113", "name": "adt/ubuntu-plucky-ppc64el-server-20250203.img", "disk_format": "qcow2", "container_format": "bare", "visibility": "private", "size": 3122659328, "virtual_size": 21474836480, "status": "active", "checksum": "6503eff206bf069cfe6bff0b413e65a2", "protected": false, "min_ram": 0, "min_disk": 20, "owner": "623df63b80274c21bc79a0c35e68d615", "os_hidden": false, "os_hash_algo": "sha512", "os_hash_value": "8ed719776ff55adedeea2a76c9959872978b987471534bb46df454737e389e322a67e449ed21e6214fb862a6840eb5bc4819dd9f8939cb8b899947db647d828d", "id": "0c217399-b3be-4a44-a7da-172b7e7687e2", "created_at": "2025-02-03T09:57:52Z", "updated_at": "2025-02-03T09:58:31Z", "locations": [{"url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/0c217399-b3be-4a44-a7da-172b7e7687e2/snap", "metadata": {"store": "ceph"}}], "direct_url": "rbd://eea9d068-c18c-11ed-8dc0-013aacb71b80/glance/0c217399-b3be-4a44-a7da-172b7e7687e2/snap", "tags": [], "self": "/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2", "file": "/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2/file", "schema": "/v2/schemas/image", "stores": "ceph"}
1007s DEBUG (session:936) GET call to image for https://glance.ps6.canonical.com:9292/v2/images/0c217399-b3be-4a44-a7da-172b7e7687e2 used request id req-c0fe59a8-24f8-490a-ac1b-9e4b31ae346e
1007s +--------------------------------------+-----------------------------------------------------------------------------------------------------------------------------------------+
1007s | Property                             | Value                                                                                                                                   |
1007s +--------------------------------------+-----------------------------------------------------------------------------------------------------------------------------------------+
1007s | OS-DCF:diskConfig                    | MANUAL                                                                                                                                  |
1007s | OS-EXT-AZ:availability_zone          |                                                                                                                                         |
1007s | OS-EXT-SRV-ATTR:host                 | -                                                                                                                                       |
1007s | OS-EXT-SRV-ATTR:hostname             | adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-pro                                                                         |
1007s | OS-EXT-SRV-ATTR:hypervisor_hostname  | -                                                                                                                                       |
1007s | OS-EXT-SRV-ATTR:instance_name        |                                                                                                                                         |
1007s | OS-EXT-SRV-ATTR:kernel_id            |                                                                                                                                         |
1007s | OS-EXT-SRV-ATTR:launch_index         | 0                                                                                                                                       |
1007s | OS-EXT-SRV-ATTR:ramdisk_id           |                                                                                                                                         |
1007s | OS-EXT-SRV-ATTR:reservation_id       | r-p7582qaj                                                                                                                              |
1007s | OS-EXT-SRV-ATTR:root_device_name     | -                                                                                                                                       |
1007s | OS-EXT-STS:power_state               | 0                                                                                                                                       |
1007s | OS-EXT-STS:task_state                | scheduling                                                                                                                              |
1007s | OS-EXT-STS:vm_state                  | building                                                                                                                                |
1007s | OS-SRV-USG:launched_at               | -                                                                                                                                       |
1007s | OS-SRV-USG:terminated_at             | -                                                                                                                                       |
1007s | accessIPv4                           |                                                                                                                                         |
1007s | accessIPv6                           |                                                                                                                                         |
1007s | adminPass                            | RvhmGqhW697d                                                                                                                            |
1007s | config_drive                         |                                                                                                                                         |
1007s | created                              | 2025-02-04T10:10:58Z                                                                                                                    |
1007s | description                          | -                                                                                                                                       |
1007s | flavor:disk                          | 20                                                                                                                                      |
1007s | flavor:ephemeral                     | 0                                                                                                                                       |
1007s | flavor:extra_specs                   | {"aggregate_instance_extra_specs:commit": "builder-ppc64el", "hw_rng:allowed": "True"}                                                  |
1007s | flavor:original_name                 | autopkgtest-ppc64el                                                                                                                     |
1007s | flavor:ram                           | 4096                                                                                                                                    |
1007s | flavor:swap                          | 0                                                                                                                                       |
1007s | flavor:vcpus                         | 2                                                                                                                                       |
1007s | hostId                               |                                                                                                                                         |
1007s | id                                   | 9d5458ff-d098-40e9-a9d8-69c16dd4f7ed                                                                                                    |
1007s | image                                | adt/ubuntu-plucky-ppc64el-server-20250203.img (0c217399-b3be-4a44-a7da-172b7e7687e2)                                                    |
1007s | key_name                             | testbed-juju-7f2275-prod-proposed-migration-environment-15                                                                              |
1007s | locked                               | False                                                                                                                                   |
1007s | locked_reason                        | -                                                                                                                                       |
1007s | metadata                             | {}                                                                                                                                      |
1007s | name                                 | adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b |
1007s | os-extended-volumes:volumes_attached | []                                                                                                                                      |
1007s | progress                             | 0                                                                                                                                       |
1007s | security_groups                      | autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-31.secgroup                                                |
1007s | server_groups                        | []                                                                                                                                      |
1007s | status                               | BUILD                                                                                                                                   |
1007s | tags                                 | []                                                                                                                                      |
1007s | tenant_id                            | 623df63b80274c21bc79a0c35e68d615                                                                                                        |
1007s | trusted_image_certificates           | -                                                                                                                                       |
1007s | updated                              | 2025-02-04T10:10:58Z                                                                                                                    |
1007s | user_id                              | c871debdeffd4cb8b69ce618fc4aa361                                                                                                        |
1007s +--------------------------------------+-----------------------------------------------------------------------------------------------------------------------------------------+DEBUG (session:517) REQ: curl -g -i -X GET https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed -H "Accept: application/json" -H "OpenStack-API-Version: compute 2.87" -H "User-Agent: python-novaclient" -H "X-Auth-Token: {SHA256}24e481a40d3e30b2b88e9966e79740ec55505af30a218b4f00f64cbb14879949" -H "X-OpenStack-Nova-API-Version: 2.87"
1007s DEBUG (connectionpool:429) https://nova.ps6.canonical.com:8774 "GET /v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed HTTP/1.1" 200 3367
1007s DEBUG (session:548) RESP: [200] Connection: Keep-Alive Content-Length: 3367 Content-Type: application/json Date: Tue, 04 Feb 2025 10:10:58 GMT Keep-Alive: timeout=75, max=993 OpenStack-API-Version: compute 2.87 Server: Apache/2.4.52 (Ubuntu) Vary: OpenStack-API-Version,X-OpenStack-Nova-API-Version X-OpenStack-Nova-API-Version: 2.87 x-compute-request-id: req-58f9dd62-e84b-41f5-b341-a758aab72b3f x-openstack-request-id: req-58f9dd62-e84b-41f5-b341-a758aab72b3f
1007s DEBUG (session:580) RESP BODY: {"server": {"id": "9d5458ff-d098-40e9-a9d8-69c16dd4f7ed", "name": "adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b", "status": "ERROR", "tenant_id": "623df63b80274c21bc79a0c35e68d615", "user_id": "c871debdeffd4cb8b69ce618fc4aa361", "metadata": {}, "hostId": "", "image": {"id": "0c217399-b3be-4a44-a7da-172b7e7687e2", "links": [{"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/images/0c217399-b3be-4a44-a7da-172b7e7687e2"}]}, "flavor": {"vcpus": 2, "ram": 4096, "disk": 20, "ephemeral": 0, "swap": 0, "original_name": "autopkgtest-ppc64el", "extra_specs": {"aggregate_instance_extra_specs:commit": "builder-ppc64el", "hw_rng:allowed": "True"}}, "created": "2025-02-04T10:10:58Z", "updated": "2025-02-04T10:10:59Z", "addresses": {}, "accessIPv4": "", "accessIPv6": "", "links": [{"rel": "self", "href": "https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}, {"rel": "bookmark", "href": "https://nova.ps6.canonical.com:8774/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed"}], "OS-DCF:diskConfig": "MANUAL", "fault": {"code": 500, "created": "2025-02-04T10:10:59Z", "message": "No valid host was found. There are not enough hosts available."}, "OS-EXT-AZ:availability_zone": "", "config_drive": "", "key_name": "testbed-juju-7f2275-prod-proposed-migration-environment-15", "OS-SRV-USG:launched_at": null, "OS-SRV-USG:terminated_at": null, "OS-EXT-SRV-ATTR:host": null, "OS-EXT-SRV-ATTR:instance_name": "instance-000a5c2b", "OS-EXT-SRV-ATTR:hypervisor_hostname": null, "OS-EXT-SRV-ATTR:reservation_id": "r-p7582qaj", "OS-EXT-SRV-ATTR:launch_index": 0, "OS-EXT-SRV-ATTR:hostname": "adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-pro", "OS-EXT-SRV-ATTR:kernel_id": "", "OS-EXT-SRV-ATTR:ramdisk_id": "", "OS-EXT-SRV-ATTR:root_device_name": null, "OS-EXT-SRV-ATTR:user_data": "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", "OS-EXT-STS:task_state": null, "OS-EXT-STS:vm_state": "error", "OS-EXT-STS:power_state": 0, "os-extended-volumes:volumes_attached": [], "locked": false, "locked_reason": null, "description": null, "tags": [], "trusted_image_certificates": null, "server_groups": []}}
1007s DEBUG (session:936) GET call to compute for https://nova.ps6.canonical.com:8774/v2.1/servers/9d5458ff-d098-40e9-a9d8-69c16dd4f7ed used request id req-58f9dd62-e84b-41f5-b341-a758aab72b3f
1007s DEBUG (shell:822) <Server: adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b>
1007s Traceback (most recent call last):
1007s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 820, in main
1007s     OpenStackComputeShell().main(argv)
1007s   File "/usr/lib/python3/dist-packages/novaclient/shell.py", line 742, in main
1007s     args.func(self.cs, args)
1007s   File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 980, in do_boot
1007s     _poll_for_status(cs.servers.get, server.id, 'building', ['active'])
1007s   File "/usr/lib/python3/dist-packages/novaclient/v2/shell.py", line 1019, in _poll_for_status
1007s     raise exceptions.ResourceInErrorState(obj)
1007s novaclient.exceptions.ResourceInErrorState: <Server: adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b>
1007s ERROR (ResourceInErrorState): <Server: adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b>
1007s 
1007s 
1007s 
1007s Error building server
1009s autopkgtest [10:27:10]: testbed dpkg architecture: ppc64el
1010s autopkgtest [10:27:11]: testbed apt version: 2.9.18
1010s autopkgtest [10:27:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup
1010s autopkgtest [10:27:11]: testbed release detected to be: None
1011s autopkgtest [10:27:12]: updating testbed package index (apt update)
1012s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB]
1012s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
1012s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
1012s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
1012s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.6 kB]
1012s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [79.8 kB]
1012s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [908 kB]
1013s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [115 kB]
1013s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [839 kB]
1013s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [4628 B]
1013s Fetched 2074 kB in 1s (1437 kB/s)
1015s Reading package lists...
1015s + lsb_release --codename --short
1015s + RELEASE=plucky
1015s + cat
1015s + [ plucky != trusty ]
1015s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
1015s Reading package lists...
1016s Building dependency tree...
1016s Reading state information...
1016s Calculating upgrade...
1017s The following packages will be upgraded:
1017s   python-babel-localedata python3-babel wireless-regdb
1017s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1017s Need to get 6786 kB of archives.
1017s After this operation, 1883 kB of additional disk space will be used.
1017s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-babel all 2.17.0-1 [101 kB]
1017s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el python-babel-localedata all 2.17.0-1 [6678 kB]
1019s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el wireless-regdb all 2024.10.07-0ubuntu1 [7214 B]
1020s Fetched 6786 kB in 2s (3390 kB/s)
1020s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 106260 files and directories currently installed.)
1020s Preparing to unpack .../python3-babel_2.17.0-1_all.deb ...
1020s /usr/bin/py3clean:101: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead.
1020s   for fn in glob1(directory, "%s.*" % fname):
1020s Unpacking python3-babel (2.17.0-1) over (2.16.0-1) ...
1020s Preparing to unpack .../python-babel-localedata_2.17.0-1_all.deb ...
1020s Unpacking python-babel-localedata (2.17.0-1) over (2.16.0-1) ...
1021s Preparing to unpack .../wireless-regdb_2024.10.07-0ubuntu1_all.deb ...
1021s Unpacking wireless-regdb (2024.10.07-0ubuntu1) over (2024.07.04-0ubuntu1) ...
1021s Setting up wireless-regdb (2024.10.07-0ubuntu1) ...
1021s Setting up python-babel-localedata (2.17.0-1) ...
1021s Setting up python3-babel (2.17.0-1) ...
1021s Processing triggers for man-db (2.13.0-1) ...
1022s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
1022s + /usr/lib/apt/apt-helper analyze-pattern ?true
1022s + sed s/\./\\./g
1022s + uname -r
1022s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.*
1022s + apt list+ + grep -v ^linux-.*6\.12\.0-12-generic.*
1022s tail -n+2
1022s + cut -d/ -f1
1022s  ?obsolete
1023s + true
1023s + obsolete_pkgs=
1023s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -yReading package lists...
1023s Building dependency tree... purge --autoremove
1023s 
1023s Reading state information...
1023s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1023s + grep -q trusty /etc/lsb-release
1023s + [ ! -d /usr/share/doc/unattended-upgrades ]
1023s + [ ! -d /usr/share/doc/lxd ]
1023s + [ ! -d /usr/share/doc/lxd-client ]
1023s + [ ! -d /usr/share/doc/snapd ]
1023s + type iptables
1023s + cat
1023s + chmod 755 /etc/rc.local
1023s + . /etc/rc.local
1023s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
1023s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
1023s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
1023s + uname -m
1023s + [ ppc64le = ppc64le ]
1023s + systemctl is-active keyboard-setup.service
1023s + [ active = failed ]
1023s + [ -d /run/systemd/system ]
1023s + systemd-detect-virt --quiet --vm
1023s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
1023s + cat
1023s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
1023s + echo COMPRESS=lz4
1023s autopkgtest [10:27:24]: upgrading testbed (apt dist-upgrade and autopurge)
1023s Reading package lists...
1024s Building dependency tree...
1024s Reading state information...
1024s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
1024s Starting 2 pkgProblemResolver with broken count: 0
1024s Done
1025s Entering ResolveByKeep
1025s 
1025s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1025s Reading package lists...
1026s Building dependency tree...
1026s Reading state information...
1026s Starting pkgProblemResolver with broken count: 0
1026s Starting 2 pkgProblemResolver with broken count: 0
1026s Done
1026s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1029s autopkgtest [10:27:30]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP Wed Jan 22 16:33:47 UTC 2025
1031s autopkgtest [10:27:32]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars
1033s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (dsc) [2749 B]
1033s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (tar) [4034 kB]
1033s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-stars 0.6-7-1 (diff) [4392 B]
1034s gpgv: Signature made Thu Jan 23 02:23:45 2025 UTC
1034s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
1034s gpgv:                issuer "plessy@debian.org"
1034s gpgv: Can't check signature: No public key
1034s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.6-7-1.dsc: no acceptable signature found
1034s autopkgtest [10:27:35]: testing package r-cran-stars version 0.6-7-1
1035s autopkgtest [10:27:36]: build not needed
1038s autopkgtest [10:27:39]: test run-unit-test: preparing testbed
1038s Reading package lists...
1039s Building dependency tree...
1039s Reading state information...
1039s Starting pkgProblemResolver with broken count: 0
1039s Starting 2 pkgProblemResolver with broken count: 0
1039s Done
1040s The following NEW packages will be installed:
1040s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
1040s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data
1040s   gdal-plugins javascript-common libabsl20230802 libaec0 libaom3
1040s   libarmadillo14 libarpack2t64 libavif16 libblas3 libblosc1 libcairo2
1040s   libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate0 libfontconfig1
1040s   libfreexl1 libfyba0t64 libgav1-1 libgdal36 libgeos-c1t64 libgeos3.13.0
1040s   libgeotiff5 libgfortran5 libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3
1040s   libharfbuzz0b libhdf4-0-alt libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec
1040s   libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8
1040s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
1040s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
1040s   libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
1040s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
1040s   libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64
1040s   libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 liblua5.4-0
1040s   libminizip1t64 libmysqlclient24 libnetcdf19t64 libodbc2 libodbcinst2
1040s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
1040s   libpaper-utils libpaper2 libpixman-1-0 libpoppler145 libpq5 libproj25
1040s   libqhull-r8.0 librav1e0.7 librttopo1 libsharpyuv0 libsm6 libsnappy1v5
1040s   libspatialite8t64 libsvtav1enc2 libsz2 libtcl8.6 libthai-data libthai0
1040s   libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7
1040s   libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1
1040s   libxt6t64 libyuv0 littler mysql-common node-bootstrap-sass node-html5shiv
1040s   node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind
1040s   r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio
1040s   r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-class
1040s   r-cran-classint r-cran-cli r-cran-clue r-cran-cluster r-cran-codetools
1040s   r-cran-collapse r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11
1040s   r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir
1040s   r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071
1040s   r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver
1040s   r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs
1040s   r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce
1040s   r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest
1040s   r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools
1040s   r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib
1040s   r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later
1040s   r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv
1040s   r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata
1040s   r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise
1040s   r-cran-mgcv r-cran-mime r-cran-misctools r-cran-munsell r-cran-ncdfgeom
1040s   r-cran-ncmeta r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply
1040s   r-cran-pcict r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten
1040s   r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx
1040s   r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6
1040s   r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils
1040s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex
1040s   r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot
1040s   r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-sftime
1040s   r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat
1040s   r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom
1040s   r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random
1040s   r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi
1040s   r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor
1040s   r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect
1040s   r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs
1040s   r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk
1040s   r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common
1040s   unzip x11-common xdg-utils zip
1040s 0 upgraded, 292 newly installed, 0 to remove and 0 not upgraded.
1040s Need to get 304 MB of archives.
1040s After this operation, 893 MB of additional disk space will be used.
1040s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB]
1040s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB]
1040s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig-config ppc64el 2.15.0-1.1ubuntu2 [37.4 kB]
1040s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfontconfig1 ppc64el 2.15.0-1.1ubuntu2 [190 kB]
1040s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB]
1040s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
1041s Get:7 http://ftpmaster.internal/ubuntu plucky/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
1041s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
1041s Get:9 http://ftpmaster.internal/ubuntu plucky/universe ppc64el gdal-data all 3.10.1+dfsg-1build2 [269 kB]
1041s Get:10 http://ftpmaster.internal/ubuntu plucky/universe ppc64el gdal-plugins ppc64el 3.10.1+dfsg-1build2 [25.6 kB]
1041s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el javascript-common all 11+nmu1 [5936 B]
1041s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el libabsl20230802 ppc64el 20230802.1-4ubuntu2 [605 kB]
1041s Get:13 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB]
1041s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libaom3 ppc64el 3.11.0-1 [3022 kB]
1042s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-4 [222 kB]
1042s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-13ubuntu1 [571 kB]
1042s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-4 [2814 kB]
1042s Get:18 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libarpack2t64 ppc64el 3.9.1-4 [107 kB]
1042s Get:19 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libarmadillo14 ppc64el 1:14.2.1+dfsg-1 [109 kB]
1042s Get:20 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libdav1d7 ppc64el 1.5.1-1 [589 kB]
1042s Get:21 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgav1-1 ppc64el 0.19.0-3 [932 kB]
1042s Get:22 http://ftpmaster.internal/ubuntu plucky/universe ppc64el librav1e0.7 ppc64el 0.7.1-9 [799 kB]
1042s Get:23 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsvtav1enc2 ppc64el 2.3.0+dfsg-1 [1575 kB]
1042s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-3ubuntu2 [215 kB]
1042s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B]
1042s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el libyuv0 ppc64el 0.0.1899.20250103-1 [273 kB]
1042s Get:27 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libavif16 ppc64el 1.1.1-1ubuntu1 [130 kB]
1042s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsnappy1v5 ppc64el 1.2.1-1 [33.4 kB]
1042s Get:29 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libblosc1 ppc64el 1.21.5+ds-1build1 [38.5 kB]
1042s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpixman-1-0 ppc64el 0.44.0-3 [334 kB]
1042s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB]
1042s Get:32 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B]
1042s Get:33 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB]
1042s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcairo2 ppc64el 1.18.2-2 [747 kB]
1042s Get:35 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libcfitsio10t64 ppc64el 4.5.0-5 [710 kB]
1042s Get:36 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdatrie1 ppc64el 0.2.13-3build1 [22.7 kB]
1042s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el libde265-0 ppc64el 1.0.15-1build4 [284 kB]
1042s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdeflate0 ppc64el 1.23-1 [63.4 kB]
1042s Get:39 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libfyba0t64 ppc64el 4.1.1-11build1 [148 kB]
1042s Get:40 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libminizip1t64 ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu1 [25.6 kB]
1042s Get:41 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libfreexl1 ppc64el 2.0.0-1build2 [53.1 kB]
1042s Get:42 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeos3.13.0 ppc64el 3.13.0-1 [1082 kB]
1043s Get:43 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeos-c1t64 ppc64el 3.13.0-1 [107 kB]
1043s Get:44 http://ftpmaster.internal/ubuntu plucky/universe ppc64el proj-data all 9.5.1-1 [7924 kB]
1044s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB]
1044s Get:46 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB]
1044s Get:47 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB]
1044s Get:48 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB]
1044s Get:49 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtiff6 ppc64el 4.5.1+git230720-4ubuntu4 [272 kB]
1044s Get:50 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libproj25 ppc64el 9.5.1-1 [1517 kB]
1044s Get:51 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeotiff5 ppc64el 1.7.3-1 [65.2 kB]
1044s Get:52 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgif7 ppc64el 5.2.2-1ubuntu1 [41.2 kB]
1044s Get:53 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B]
1044s Get:54 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf4-0-alt ppc64el 4.3.0-1 [337 kB]
1044s Get:55 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-3 [1523 kB]
1044s Get:56 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif-plugin-aomdec ppc64el 1.19.5-1build1 [11.7 kB]
1044s Get:57 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif-plugin-libde265 ppc64el 1.19.5-1build1 [9188 B]
1044s Get:58 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif1 ppc64el 1.19.5-1build1 [452 kB]
1044s Get:59 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liburiparser1 ppc64el 0.9.8+dfsg-2 [52.7 kB]
1044s Get:60 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmlbase1t64 ppc64el 1.3.0-12build1 [59.5 kB]
1044s Get:61 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmldom1t64 ppc64el 1.3.0-12build1 [168 kB]
1044s Get:62 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmlengine1t64 ppc64el 1.3.0-12build1 [78.0 kB]
1044s Get:63 http://ftpmaster.internal/ubuntu plucky/main ppc64el mysql-common all 5.8+1.1.1 [6800 B]
1044s Get:64 http://ftpmaster.internal/ubuntu plucky/main ppc64el libmysqlclient24 ppc64el 8.4.4-0ubuntu1 [1295 kB]
1044s Get:65 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-3 [74.9 kB]
1044s Get:66 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libnetcdf19t64 ppc64el 1:4.9.2-6ubuntu2 [599 kB]
1044s Get:67 http://ftpmaster.internal/ubuntu plucky/main ppc64el libltdl7 ppc64el 2.5.4-2.1 [50.2 kB]
1044s Get:68 http://ftpmaster.internal/ubuntu plucky/main ppc64el libodbc2 ppc64el 2.3.12-2ubuntu1 [189 kB]
1044s Get:69 http://ftpmaster.internal/ubuntu plucky/main ppc64el unixodbc-common all 2.3.12-2ubuntu1 [9044 B]
1044s Get:70 http://ftpmaster.internal/ubuntu plucky/main ppc64el libodbcinst2 ppc64el 2.3.12-2ubuntu1 [37.3 kB]
1044s Get:71 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libogdi4.1 ppc64el 4.1.1+ds-5 [257 kB]
1044s Get:72 http://ftpmaster.internal/ubuntu plucky/main ppc64el libopenjp2-7 ppc64el 2.5.0-2ubuntu3 [247 kB]
1044s Get:73 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgpgmepp6t64 ppc64el 1.24.1-2ubuntu1 [134 kB]
1044s Get:74 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB]
1044s Get:75 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpoppler145 ppc64el 25.01.0-2 [1397 kB]
1044s Get:76 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpq5 ppc64el 17.2-1build2 [173 kB]
1044s Get:77 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB]
1044s Get:78 http://ftpmaster.internal/ubuntu plucky/universe ppc64el librttopo1 ppc64el 1.1.0-3build2 [240 kB]
1044s Get:79 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libspatialite8t64 ppc64el 5.1.0-3build1 [2233 kB]
1044s Get:80 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libxerces-c3.2t64 ppc64el 3.2.4+debian-1.3build1 [1065 kB]
1044s Get:81 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgdal36 ppc64el 3.10.1+dfsg-1build2 [10.6 MB]
1045s Get:82 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-13ubuntu1 [161 kB]
1045s Get:83 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB]
1045s Get:84 http://ftpmaster.internal/ubuntu plucky/main ppc64el libharfbuzz0b ppc64el 10.2.0-1 [598 kB]
1045s Get:85 http://ftpmaster.internal/ubuntu plucky/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB]
1045s Get:86 http://ftpmaster.internal/ubuntu plucky/main ppc64el libice6 ppc64el 2:1.1.1-1 [49.9 kB]
1045s Get:87 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
1045s Get:88 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
1045s Get:89 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
1045s Get:90 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB]
1045s Get:91 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB]
1045s Get:92 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
1045s Get:93 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
1045s Get:94 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
1045s Get:95 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
1045s Get:96 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
1045s Get:97 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
1045s Get:98 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
1045s Get:99 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
1045s Get:100 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
1045s Get:101 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblua5.4-0 ppc64el 5.4.7-1 [211 kB]
1045s Get:102 http://ftpmaster.internal/ubuntu plucky/main ppc64el libthai-data all 0.1.29-2build1 [158 kB]
1045s Get:103 http://ftpmaster.internal/ubuntu plucky/main ppc64el libthai0 ppc64el 0.1.29-2build1 [21.8 kB]
1045s Get:104 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpango-1.0-0 ppc64el 1.56.1-1 [277 kB]
1046s Get:105 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpangoft2-1.0-0 ppc64el 1.56.1-1 [58.6 kB]
1046s Get:106 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpangocairo-1.0-0 ppc64el 1.56.1-1 [30.6 kB]
1046s Get:107 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpaper2 ppc64el 2.2.5-0.3 [18.0 kB]
1046s Get:108 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpaper-utils ppc64el 2.2.5-0.3 [15.6 kB]
1046s Get:109 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsm6 ppc64el 2:1.2.4-1 [18.4 kB]
1046s Get:110 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtcl8.6 ppc64el 8.6.16+dfsg-1 [1201 kB]
1046s Get:111 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB]
1046s Get:112 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B]
1046s Get:113 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtk8.6 ppc64el 8.6.16-1 [946 kB]
1046s Get:114 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libudunits2-data all 2.2.28-7build1 [19.4 kB]
1046s Get:115 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libudunits2-0 ppc64el 2.2.28-7build1 [67.5 kB]
1046s Get:116 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.2build1 [202 kB]
1046s Get:117 http://ftpmaster.internal/ubuntu plucky/main ppc64el zip ppc64el 3.0-14ubuntu2 [196 kB]
1046s Get:118 http://ftpmaster.internal/ubuntu plucky/main ppc64el unzip ppc64el 6.0-28ubuntu6 [200 kB]
1046s Get:119 http://ftpmaster.internal/ubuntu plucky/main ppc64el xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
1046s Get:120 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-base-core ppc64el 4.4.2-1build1 [28.9 MB]
1047s Get:121 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-littler ppc64el 0.3.20-2 [97.3 kB]
1047s Get:122 http://ftpmaster.internal/ubuntu plucky/universe ppc64el littler all 0.3.20-2 [2554 B]
1047s Get:123 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB]
1047s Get:124 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
1047s Get:125 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB]
1047s Get:126 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pandoc-data all 3.1.11.1-3build1 [78.8 kB]
1047s Get:127 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pandoc ppc64el 3.1.11.1+ds-2 [30.4 MB]
1049s Get:128 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-abind all 1.4-8-1 [66.9 kB]
1049s Get:129 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cli ppc64el 3.6.3-1 [1373 kB]
1049s Get:130 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB]
1049s Get:131 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB]
1049s Get:132 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rlang ppc64el 1.1.5-1 [1740 kB]
1049s Get:133 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
1049s Get:134 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB]
1049s Get:135 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB]
1049s Get:136 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB]
1049s Get:137 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
1049s Get:138 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB]
1049s Get:139 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB]
1049s Get:140 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
1049s Get:141 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-3 [420 kB]
1049s Get:142 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-withr all 3.0.2+dfsg-1 [214 kB]
1049s Get:143 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tidyselect ppc64el 1.2.1+dfsg-1 [222 kB]
1049s Get:144 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-dplyr ppc64el 1.1.4-4 [1542 kB]
1049s Get:145 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB]
1049s Get:146 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mass ppc64el 7.3-64-1 [1117 kB]
1049s Get:147 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-class ppc64el 7.3-23-1 [94.5 kB]
1049s Get:148 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-proxy ppc64el 0.4-27-1 [185 kB]
1049s Get:149 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-e1071 ppc64el 1.7-16-1 [579 kB]
1049s Get:150 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-kernsmooth ppc64el 2.23-26-1 [96.6 kB]
1049s Get:151 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-classint ppc64el 0.4-11+dfsg-1 [109 kB]
1049s Get:152 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-dbi all 1.2.3-1 [853 kB]
1049s Get:153 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
1049s Get:154 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcpp ppc64el 1.0.14-1 [2006 kB]
1049s Get:155 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-wk ppc64el 0.9.4-1 [1815 kB]
1049s Get:156 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-s2 ppc64el 1.1.7-1 [2205 kB]
1049s Get:157 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-units ppc64el 0.8-5+dfsg-1 [275 kB]
1049s Get:158 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sf ppc64el 1.0-19+dfsg-1 [3287 kB]
1050s Get:159 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-areal all 0.1.8+dfsg-2 [1004 kB]
1050s Get:160 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sys ppc64el 3.4.3-1 [45.5 kB]
1050s Get:161 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-askpass ppc64el 1.2.1-1 [24.9 kB]
1050s Get:162 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB]
1050s Get:163 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-bdsmatrix ppc64el 1.3-7-1 [308 kB]
1050s Get:164 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-brio ppc64el 1.1.5-1 [39.1 kB]
1050s Get:165 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fastmap ppc64el 1.2.0-1 [75.0 kB]
1050s Get:166 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cachem ppc64el 1.1.0-1 [74.1 kB]
1050s Get:167 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-digest ppc64el 0.6.37-1 [223 kB]
1050s Get:168 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-htmltools ppc64el 0.5.8.1-1 [373 kB]
1050s Get:169 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
1050s Get:170 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-jsonlite ppc64el 1.8.9+dfsg-1 [451 kB]
1050s Get:171 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB]
1050s Get:172 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mime ppc64el 0.12-2 [35.9 kB]
1050s Get:173 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fs ppc64el 1.6.5+dfsg-1 [248 kB]
1050s Get:174 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB]
1050s Get:175 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sass ppc64el 0.4.9+dfsg-1 [1034 kB]
1050s Get:176 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
1050s Get:177 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cairo ppc64el 1.6-2-1 [97.5 kB]
1050s Get:178 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ps ppc64el 1.8.1-1 [399 kB]
1050s Get:179 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-processx ppc64el 3.8.5-1 [360 kB]
1050s Get:180 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-callr all 3.7.6-1 [458 kB]
1050s Get:181 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cluster ppc64el 2.1.8-1 [586 kB]
1050s Get:182 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-clue ppc64el 0.3-66-1 [971 kB]
1050s Get:183 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-codetools all 0.2-20-1 [90.5 kB]
1050s Get:184 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-collapse ppc64el 2.0.19-1 [3440 kB]
1050s Get:185 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-colorspace ppc64el 2.1-1+dfsg-1 [1570 kB]
1050s Get:186 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-commonmark ppc64el 1.9.2-2 [141 kB]
1050s Get:187 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB]
1050s Get:188 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rex all 1.2.1-1 [129 kB]
1050s Get:189 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-curl ppc64el 6.1.0+dfsg-1 [197 kB]
1050s Get:190 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-openssl ppc64el 2.2.0+dfsg-1 [408 kB]
1050s Get:191 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB]
1050s Get:192 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB]
1050s Get:193 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-yaml ppc64el 2.3.10-1 [123 kB]
1050s Get:194 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-covr ppc64el 3.6.4+dfsg-1 [302 kB]
1050s Get:195 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cpp11 all 0.5.1-1 [233 kB]
1050s Get:196 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cubelyr all 1.0.2-1 [347 kB]
1050s Get:197 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-deldir ppc64el 2.0-4-1build1 [273 kB]
1050s Get:198 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-desc all 1.4.3-1 [359 kB]
1050s Get:199 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-diffobj ppc64el 0.3.5-1 [1118 kB]
1050s Get:200 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-evaluate all 1.0.3-1 [114 kB]
1050s Get:201 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lattice ppc64el 0.22-6-1 [1340 kB]
1051s Get:202 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sp ppc64el 1:2.1-4+dfsg-1 [1474 kB]
1051s Get:203 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-terra ppc64el 1.8-10-1 [4285 kB]
1051s Get:204 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-raster ppc64el 3.6-31-1 [3184 kB]
1052s Get:205 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-exactextractr ppc64el 0.10.0-1build2 [584 kB]
1052s Get:206 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-farver ppc64el 2.1.2-1 [1389 kB]
1052s Get:207 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fnn ppc64el 1.1.4.1-1 [137 kB]
1052s Get:208 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fontawesome all 0.5.3-1 [1331 kB]
1052s Get:209 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-formula all 1.2-5-1 [158 kB]
1052s Get:210 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-globals all 0.16.3-1 [120 kB]
1052s Get:211 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
1052s Get:212 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-parallelly ppc64el 1.41.0-1 [507 kB]
1052s Get:213 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-future all 1.34.0+dfsg-1 [646 kB]
1052s Get:214 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
1052s Get:215 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
1052s Get:216 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB]
1052s Get:217 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-nlme ppc64el 3.1.167-1 [2329 kB]
1052s Get:218 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-matrix ppc64el 1.7-2-1 [4536 kB]
1052s Get:219 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB]
1052s Get:220 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB]
1052s Get:221 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-munsell all 0.5.1-1 [213 kB]
1052s Get:222 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
1052s Get:223 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB]
1052s Get:224 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB]
1052s Get:225 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
1053s Get:226 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tweenr ppc64el 2.0.3-1 [432 kB]
1053s Get:227 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-polyclip ppc64el 1.10-7-1 [124 kB]
1053s Get:228 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-systemfonts ppc64el 1.2.1-1 [346 kB]
1053s Get:229 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcppeigen ppc64el 0.3.4.0.2-1 [1477 kB]
1053s Get:230 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggforce ppc64el 0.4.2-1 [1836 kB]
1053s Get:231 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stringi ppc64el 1.8.4-1build1 [949 kB]
1053s Get:232 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB]
1053s Get:233 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggthemes all 5.1.0-1 [434 kB]
1053s Get:234 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-goftest ppc64el 1.2-3-1 [60.2 kB]
1053s Get:235 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-gridextra all 2.3-3build1 [1024 kB]
1053s Get:236 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-zoo ppc64el 1.8-12-2 [986 kB]
1053s Get:237 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sftime all 0.2-0-6 [168 kB]
1053s Get:238 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xts ppc64el 0.14.1-1 [1209 kB]
1053s Get:239 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-intervals ppc64el 0.15.5-1 [603 kB]
1053s Get:240 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spacetime all 1.3-2-2 [2775 kB]
1053s Get:241 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stars all 0.6-7-1 [4411 kB]
1053s Get:242 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-gstat ppc64el 2.1-2-1 [2360 kB]
1053s Get:243 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xfun ppc64el 0.50+dfsg-1 [569 kB]
1053s Get:244 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-highr all 0.11+dfsg-1 [38.5 kB]
1053s Get:245 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-later ppc64el 1.4.1+dfsg-1 [153 kB]
1053s Get:246 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-promises ppc64el 1.3.2+dfsg-1 [297 kB]
1053s Get:247 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-httpuv ppc64el 1.6.15+dfsg-1 [521 kB]
1053s Get:248 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
1054s Get:249 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-knitr all 1.49+dfsg-1 [859 kB]
1054s Get:250 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lmtest ppc64el 0.9.40-1 [397 kB]
1054s Get:251 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lwgeom ppc64el 0.2-14-1 [482 kB]
1054s Get:252 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-maps ppc64el 3.4.2-1 [2366 kB]
1054s Get:253 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mapdata ppc64el 2.3.1-1 [23.5 MB]
1055s Get:254 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-misctools all 0.6-28-1 [99.9 kB]
1055s Get:255 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sandwich all 3.1-1-1 [1483 kB]
1055s Get:256 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-maxlik all 1.5-2.1-1 [1083 kB]
1055s Get:257 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rnetcdf ppc64el 2.9-1-1build2 [254 kB]
1055s Get:258 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB]
1055s Get:259 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ncmeta all 0.3.6-1 [360 kB]
1055s Get:260 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB]
1055s Get:261 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pbapply all 1.7-2-1 [102 kB]
1055s Get:262 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pcict ppc64el 0.5-4.4-1 [97.5 kB]
1055s Get:263 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgbuild all 1.4.6-1 [213 kB]
1055s Get:264 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rprojroot all 2.0.4-2 [125 kB]
1055s Get:265 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgload all 1.4.0-1 [247 kB]
1055s Get:266 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rbibutils ppc64el 2.3-1 [1047 kB]
1055s Get:267 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rdpack all 2.6.2-1 [757 kB]
1055s Get:268 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-plm all 2.6-5-1 [1815 kB]
1055s Get:269 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-praise all 1.0.0-4build1 [20.3 kB]
1055s Get:270 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-randomforest ppc64el 4.7-1.2-1 [227 kB]
1055s Get:271 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tinytex all 0.54-1 [147 kB]
1055s Get:272 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-modernizr all 3.13.0-0.1 [101 kB]
1055s Get:273 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB]
1056s Get:274 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB]
1056s Get:275 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
1056s Get:276 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
1056s Get:277 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
1056s Get:278 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-survival ppc64el 3.8-3-1 [8254 kB]
1056s Get:279 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rpart ppc64el 4.1.24-1 [676 kB]
1056s Get:280 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.utils ppc64el 3.1-2-1 [383 kB]
1056s Get:281 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.data all 3.1-4-1 [4047 kB]
1056s Get:282 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.geom ppc64el 3.2-9-2 [3979 kB]
1056s Get:283 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.random ppc64el 3.2-3-1 [1174 kB]
1056s Get:284 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tensor all 1.5-4 [15.7 kB]
1056s Get:285 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.sparse ppc64el 3.1-0-1 [222 kB]
1056s Get:286 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.explore ppc64el 3.2-7-1 [3444 kB]
1057s Get:287 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.model ppc64el 3.2-11-1 [3384 kB]
1057s Get:288 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.linnet ppc64el 3.1-5-1 [1476 kB]
1057s Get:289 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat ppc64el 3.0-8-1 [3881 kB]
1057s Get:290 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-waldo all 0.6.1-1 [150 kB]
1057s Get:291 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el r-cran-testthat ppc64el 3.2.3-1 [1649 kB]
1057s Get:292 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-viridis all 0.6.5-1 [2770 kB]
1058s Preconfiguring packages ...
1058s Fetched 304 MB in 18s (17.3 MB/s)
1058s Selecting previously unselected package fonts-dejavu-mono.
1058s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 25%
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(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 106283 files and directories currently installed.)
1058s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
1058s Unpacking fonts-dejavu-mono (2.37-8) ...
1058s Selecting previously unselected package fonts-dejavu-core.
1058s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
1058s Unpacking fonts-dejavu-core (2.37-8) ...
1058s Selecting previously unselected package fontconfig-config.
1058s Preparing to unpack .../002-fontconfig-config_2.15.0-1.1ubuntu2_ppc64el.deb ...
1059s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
1059s Selecting previously unselected package libfontconfig1:ppc64el.
1059s Preparing to unpack .../003-libfontconfig1_2.15.0-1.1ubuntu2_ppc64el.deb ...
1059s Unpacking libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ...
1059s Selecting previously unselected package fontconfig.
1059s Preparing to unpack .../004-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ...
1059s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
1059s Selecting previously unselected package fonts-font-awesome.
1059s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
1059s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
1059s Selecting previously unselected package fonts-glyphicons-halflings.
1059s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
1059s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
1059s Selecting previously unselected package fonts-mathjax.
1059s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
1059s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
1059s Selecting previously unselected package gdal-data.
1059s Preparing to unpack .../008-gdal-data_3.10.1+dfsg-1build2_all.deb ...
1059s Unpacking gdal-data (3.10.1+dfsg-1build2) ...
1059s Selecting previously unselected package gdal-plugins:ppc64el.
1059s Preparing to unpack .../009-gdal-plugins_3.10.1+dfsg-1build2_ppc64el.deb ...
1059s Unpacking gdal-plugins:ppc64el (3.10.1+dfsg-1build2) ...
1059s Selecting previously unselected package javascript-common.
1059s Preparing to unpack .../010-javascript-common_11+nmu1_all.deb ...
1059s Unpacking javascript-common (11+nmu1) ...
1059s Selecting previously unselected package libabsl20230802:ppc64el.
1059s Preparing to unpack .../011-libabsl20230802_20230802.1-4ubuntu2_ppc64el.deb ...
1059s Unpacking libabsl20230802:ppc64el (20230802.1-4ubuntu2) ...
1059s Selecting previously unselected package libaec0:ppc64el.
1059s Preparing to unpack .../012-libaec0_1.1.3-1_ppc64el.deb ...
1059s Unpacking libaec0:ppc64el (1.1.3-1) ...
1059s Selecting previously unselected package libaom3:ppc64el.
1059s Preparing to unpack .../013-libaom3_3.11.0-1_ppc64el.deb ...
1059s Unpacking libaom3:ppc64el (3.11.0-1) ...
1059s Selecting previously unselected package libblas3:ppc64el.
1059s Preparing to unpack .../014-libblas3_3.12.0-4_ppc64el.deb ...
1059s Unpacking libblas3:ppc64el (3.12.0-4) ...
1059s Selecting previously unselected package libgfortran5:ppc64el.
1059s Preparing to unpack .../015-libgfortran5_14.2.0-13ubuntu1_ppc64el.deb ...
1059s Unpacking libgfortran5:ppc64el (14.2.0-13ubuntu1) ...
1060s Selecting previously unselected package liblapack3:ppc64el.
1060s Preparing to unpack .../016-liblapack3_3.12.0-4_ppc64el.deb ...
1060s Unpacking liblapack3:ppc64el (3.12.0-4) ...
1060s Selecting previously unselected package libarpack2t64:ppc64el.
1060s Preparing to unpack .../017-libarpack2t64_3.9.1-4_ppc64el.deb ...
1060s Unpacking libarpack2t64:ppc64el (3.9.1-4) ...
1060s Selecting previously unselected package libarmadillo14.
1060s Preparing to unpack .../018-libarmadillo14_1%3a14.2.1+dfsg-1_ppc64el.deb ...
1060s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ...
1060s Selecting previously unselected package libdav1d7:ppc64el.
1060s Preparing to unpack .../019-libdav1d7_1.5.1-1_ppc64el.deb ...
1060s Unpacking libdav1d7:ppc64el (1.5.1-1) ...
1060s Selecting previously unselected package libgav1-1:ppc64el.
1060s Preparing to unpack .../020-libgav1-1_0.19.0-3_ppc64el.deb ...
1060s Unpacking libgav1-1:ppc64el (0.19.0-3) ...
1060s Selecting previously unselected package librav1e0.7:ppc64el.
1060s Preparing to unpack .../021-librav1e0.7_0.7.1-9_ppc64el.deb ...
1060s Unpacking librav1e0.7:ppc64el (0.7.1-9) ...
1060s Selecting previously unselected package libsvtav1enc2:ppc64el.
1060s Preparing to unpack .../022-libsvtav1enc2_2.3.0+dfsg-1_ppc64el.deb ...
1060s Unpacking libsvtav1enc2:ppc64el (2.3.0+dfsg-1) ...
1060s Selecting previously unselected package libjpeg-turbo8:ppc64el.
1060s Preparing to unpack .../023-libjpeg-turbo8_2.1.5-3ubuntu2_ppc64el.deb ...
1060s Unpacking libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ...
1060s Selecting previously unselected package libjpeg8:ppc64el.
1060s Preparing to unpack .../024-libjpeg8_8c-2ubuntu11_ppc64el.deb ...
1060s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ...
1060s Selecting previously unselected package libyuv0:ppc64el.
1060s Preparing to unpack .../025-libyuv0_0.0.1899.20250103-1_ppc64el.deb ...
1060s Unpacking libyuv0:ppc64el (0.0.1899.20250103-1) ...
1060s Selecting previously unselected package libavif16:ppc64el.
1060s Preparing to unpack .../026-libavif16_1.1.1-1ubuntu1_ppc64el.deb ...
1060s Unpacking libavif16:ppc64el (1.1.1-1ubuntu1) ...
1060s Selecting previously unselected package libsnappy1v5:ppc64el.
1060s Preparing to unpack .../027-libsnappy1v5_1.2.1-1_ppc64el.deb ...
1060s Unpacking libsnappy1v5:ppc64el (1.2.1-1) ...
1060s Selecting previously unselected package libblosc1:ppc64el.
1060s Preparing to unpack .../028-libblosc1_1.21.5+ds-1build1_ppc64el.deb ...
1060s Unpacking libblosc1:ppc64el (1.21.5+ds-1build1) ...
1060s Selecting previously unselected package libpixman-1-0:ppc64el.
1060s Preparing to unpack .../029-libpixman-1-0_0.44.0-3_ppc64el.deb ...
1060s Unpacking libpixman-1-0:ppc64el (0.44.0-3) ...
1060s Selecting previously unselected package libxcb-render0:ppc64el.
1060s Preparing to unpack .../030-libxcb-render0_1.17.0-2_ppc64el.deb ...
1060s Unpacking libxcb-render0:ppc64el (1.17.0-2) ...
1060s Selecting previously unselected package libxcb-shm0:ppc64el.
1060s Preparing to unpack .../031-libxcb-shm0_1.17.0-2_ppc64el.deb ...
1060s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ...
1060s Selecting previously unselected package libxrender1:ppc64el.
1060s Preparing to unpack .../032-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ...
1060s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ...
1060s Selecting previously unselected package libcairo2:ppc64el.
1060s Preparing to unpack .../033-libcairo2_1.18.2-2_ppc64el.deb ...
1060s Unpacking libcairo2:ppc64el (1.18.2-2) ...
1060s Selecting previously unselected package libcfitsio10t64:ppc64el.
1060s Preparing to unpack .../034-libcfitsio10t64_4.5.0-5_ppc64el.deb ...
1060s Unpacking libcfitsio10t64:ppc64el (4.5.0-5) ...
1060s Selecting previously unselected package libdatrie1:ppc64el.
1060s Preparing to unpack .../035-libdatrie1_0.2.13-3build1_ppc64el.deb ...
1060s Unpacking libdatrie1:ppc64el (0.2.13-3build1) ...
1060s Selecting previously unselected package libde265-0:ppc64el.
1060s Preparing to unpack .../036-libde265-0_1.0.15-1build4_ppc64el.deb ...
1060s Unpacking libde265-0:ppc64el (1.0.15-1build4) ...
1061s Selecting previously unselected package libdeflate0:ppc64el.
1061s Preparing to unpack .../037-libdeflate0_1.23-1_ppc64el.deb ...
1061s Unpacking libdeflate0:ppc64el (1.23-1) ...
1061s Selecting previously unselected package libfyba0t64:ppc64el.
1061s Preparing to unpack .../038-libfyba0t64_4.1.1-11build1_ppc64el.deb ...
1061s Unpacking libfyba0t64:ppc64el (4.1.1-11build1) ...
1061s Selecting previously unselected package libminizip1t64:ppc64el.
1061s Preparing to unpack .../039-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_ppc64el.deb ...
1061s Unpacking libminizip1t64:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1061s Selecting previously unselected package libfreexl1:ppc64el.
1061s Preparing to unpack .../040-libfreexl1_2.0.0-1build2_ppc64el.deb ...
1061s Unpacking libfreexl1:ppc64el (2.0.0-1build2) ...
1061s Selecting previously unselected package libgeos3.13.0:ppc64el.
1061s Preparing to unpack .../041-libgeos3.13.0_3.13.0-1_ppc64el.deb ...
1061s Unpacking libgeos3.13.0:ppc64el (3.13.0-1) ...
1061s Selecting previously unselected package libgeos-c1t64:ppc64el.
1061s Preparing to unpack .../042-libgeos-c1t64_3.13.0-1_ppc64el.deb ...
1061s Unpacking libgeos-c1t64:ppc64el (3.13.0-1) ...
1061s Selecting previously unselected package proj-data.
1061s Preparing to unpack .../043-proj-data_9.5.1-1_all.deb ...
1061s Unpacking proj-data (9.5.1-1) ...
1061s Selecting previously unselected package libjbig0:ppc64el.
1061s Preparing to unpack .../044-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ...
1061s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ...
1061s Selecting previously unselected package liblerc4:ppc64el.
1061s Preparing to unpack .../045-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ...
1061s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ...
1061s Selecting previously unselected package libsharpyuv0:ppc64el.
1061s Preparing to unpack .../046-libsharpyuv0_1.5.0-0.1_ppc64el.deb ...
1061s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ...
1061s Selecting previously unselected package libwebp7:ppc64el.
1061s Preparing to unpack .../047-libwebp7_1.5.0-0.1_ppc64el.deb ...
1061s Unpacking libwebp7:ppc64el (1.5.0-0.1) ...
1061s Selecting previously unselected package libtiff6:ppc64el.
1061s Preparing to unpack .../048-libtiff6_4.5.1+git230720-4ubuntu4_ppc64el.deb ...
1061s Unpacking libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ...
1061s Selecting previously unselected package libproj25:ppc64el.
1061s Preparing to unpack .../049-libproj25_9.5.1-1_ppc64el.deb ...
1061s Unpacking libproj25:ppc64el (9.5.1-1) ...
1061s Selecting previously unselected package libgeotiff5:ppc64el.
1061s Preparing to unpack .../050-libgeotiff5_1.7.3-1_ppc64el.deb ...
1061s Unpacking libgeotiff5:ppc64el (1.7.3-1) ...
1061s Selecting previously unselected package libgif7:ppc64el.
1061s Preparing to unpack .../051-libgif7_5.2.2-1ubuntu1_ppc64el.deb ...
1061s Unpacking libgif7:ppc64el (5.2.2-1ubuntu1) ...
1061s Selecting previously unselected package libsz2:ppc64el.
1061s Preparing to unpack .../052-libsz2_1.1.3-1_ppc64el.deb ...
1061s Unpacking libsz2:ppc64el (1.1.3-1) ...
1061s Selecting previously unselected package libhdf4-0-alt:ppc64el.
1061s Preparing to unpack .../053-libhdf4-0-alt_4.3.0-1_ppc64el.deb ...
1061s Unpacking libhdf4-0-alt:ppc64el (4.3.0-1) ...
1061s Selecting previously unselected package libhdf5-310:ppc64el.
1061s Preparing to unpack .../054-libhdf5-310_1.14.5+repack-3_ppc64el.deb ...
1061s Unpacking libhdf5-310:ppc64el (1.14.5+repack-3) ...
1061s Selecting previously unselected package libheif-plugin-aomdec:ppc64el.
1061s Preparing to unpack .../055-libheif-plugin-aomdec_1.19.5-1build1_ppc64el.deb ...
1061s Unpacking libheif-plugin-aomdec:ppc64el (1.19.5-1build1) ...
1061s Selecting previously unselected package libheif-plugin-libde265:ppc64el.
1061s Preparing to unpack .../056-libheif-plugin-libde265_1.19.5-1build1_ppc64el.deb ...
1061s Unpacking libheif-plugin-libde265:ppc64el (1.19.5-1build1) ...
1061s Selecting previously unselected package libheif1:ppc64el.
1061s Preparing to unpack .../057-libheif1_1.19.5-1build1_ppc64el.deb ...
1061s Unpacking libheif1:ppc64el (1.19.5-1build1) ...
1061s Selecting previously unselected package liburiparser1:ppc64el.
1061s Preparing to unpack .../058-liburiparser1_0.9.8+dfsg-2_ppc64el.deb ...
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1061s Selecting previously unselected package libkmlbase1t64:ppc64el.
1061s Preparing to unpack .../059-libkmlbase1t64_1.3.0-12build1_ppc64el.deb ...
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1061s Selecting previously unselected package libkmldom1t64:ppc64el.
1061s Preparing to unpack .../060-libkmldom1t64_1.3.0-12build1_ppc64el.deb ...
1061s Unpacking libkmldom1t64:ppc64el (1.3.0-12build1) ...
1061s Selecting previously unselected package libkmlengine1t64:ppc64el.
1061s Preparing to unpack .../061-libkmlengine1t64_1.3.0-12build1_ppc64el.deb ...
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1062s Selecting previously unselected package mysql-common.
1062s Preparing to unpack .../062-mysql-common_5.8+1.1.1_all.deb ...
1062s Unpacking mysql-common (5.8+1.1.1) ...
1062s Selecting previously unselected package libmysqlclient24:ppc64el.
1062s Preparing to unpack .../063-libmysqlclient24_8.4.4-0ubuntu1_ppc64el.deb ...
1062s Unpacking libmysqlclient24:ppc64el (8.4.4-0ubuntu1) ...
1062s Selecting previously unselected package libhdf5-hl-310:ppc64el.
1062s Preparing to unpack .../064-libhdf5-hl-310_1.14.5+repack-3_ppc64el.deb ...
1062s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-3) ...
1062s Selecting previously unselected package libnetcdf19t64:ppc64el.
1062s Preparing to unpack .../065-libnetcdf19t64_1%3a4.9.2-6ubuntu2_ppc64el.deb ...
1062s Unpacking libnetcdf19t64:ppc64el (1:4.9.2-6ubuntu2) ...
1062s Selecting previously unselected package libltdl7:ppc64el.
1062s Preparing to unpack .../066-libltdl7_2.5.4-2.1_ppc64el.deb ...
1062s Unpacking libltdl7:ppc64el (2.5.4-2.1) ...
1062s Selecting previously unselected package libodbc2:ppc64el.
1062s Preparing to unpack .../067-libodbc2_2.3.12-2ubuntu1_ppc64el.deb ...
1062s Unpacking libodbc2:ppc64el (2.3.12-2ubuntu1) ...
1062s Selecting previously unselected package unixodbc-common.
1062s Preparing to unpack .../068-unixodbc-common_2.3.12-2ubuntu1_all.deb ...
1062s Unpacking unixodbc-common (2.3.12-2ubuntu1) ...
1062s Selecting previously unselected package libodbcinst2:ppc64el.
1062s Preparing to unpack .../069-libodbcinst2_2.3.12-2ubuntu1_ppc64el.deb ...
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1062s Selecting previously unselected package libogdi4.1:ppc64el.
1062s Preparing to unpack .../070-libogdi4.1_4.1.1+ds-5_ppc64el.deb ...
1062s Unpacking libogdi4.1:ppc64el (4.1.1+ds-5) ...
1062s Selecting previously unselected package libopenjp2-7:ppc64el.
1062s Preparing to unpack .../071-libopenjp2-7_2.5.0-2ubuntu3_ppc64el.deb ...
1062s Unpacking libopenjp2-7:ppc64el (2.5.0-2ubuntu3) ...
1062s Selecting previously unselected package libgpgmepp6t64:ppc64el.
1062s Preparing to unpack .../072-libgpgmepp6t64_1.24.1-2ubuntu1_ppc64el.deb ...
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1062s Selecting previously unselected package liblcms2-2:ppc64el.
1062s Preparing to unpack .../073-liblcms2-2_2.16-2_ppc64el.deb ...
1062s Unpacking liblcms2-2:ppc64el (2.16-2) ...
1062s Selecting previously unselected package libpoppler145:ppc64el.
1062s Preparing to unpack .../074-libpoppler145_25.01.0-2_ppc64el.deb ...
1062s Unpacking libpoppler145:ppc64el (25.01.0-2) ...
1062s Selecting previously unselected package libpq5:ppc64el.
1062s Preparing to unpack .../075-libpq5_17.2-1build2_ppc64el.deb ...
1062s Unpacking libpq5:ppc64el (17.2-1build2) ...
1062s Selecting previously unselected package libqhull-r8.0:ppc64el.
1062s Preparing to unpack .../076-libqhull-r8.0_2020.2-6build1_ppc64el.deb ...
1062s Unpacking libqhull-r8.0:ppc64el (2020.2-6build1) ...
1062s Selecting previously unselected package librttopo1:ppc64el.
1062s Preparing to unpack .../077-librttopo1_1.1.0-3build2_ppc64el.deb ...
1062s Unpacking librttopo1:ppc64el (1.1.0-3build2) ...
1062s Selecting previously unselected package libspatialite8t64:ppc64el.
1062s Preparing to unpack .../078-libspatialite8t64_5.1.0-3build1_ppc64el.deb ...
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1062s Selecting previously unselected package libxerces-c3.2t64:ppc64el.
1062s Preparing to unpack .../079-libxerces-c3.2t64_3.2.4+debian-1.3build1_ppc64el.deb ...
1062s Unpacking libxerces-c3.2t64:ppc64el (3.2.4+debian-1.3build1) ...
1062s Selecting previously unselected package libgdal36:ppc64el.
1062s Preparing to unpack .../080-libgdal36_3.10.1+dfsg-1build2_ppc64el.deb ...
1062s Unpacking libgdal36:ppc64el (3.10.1+dfsg-1build2) ...
1063s Selecting previously unselected package libgomp1:ppc64el.
1063s Preparing to unpack .../081-libgomp1_14.2.0-13ubuntu1_ppc64el.deb ...
1063s Unpacking libgomp1:ppc64el (14.2.0-13ubuntu1) ...
1063s Selecting previously unselected package libgraphite2-3:ppc64el.
1063s Preparing to unpack .../082-libgraphite2-3_1.3.14-2ubuntu1_ppc64el.deb ...
1063s Unpacking libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ...
1063s Selecting previously unselected package libharfbuzz0b:ppc64el.
1063s Preparing to unpack .../083-libharfbuzz0b_10.2.0-1_ppc64el.deb ...
1063s Unpacking libharfbuzz0b:ppc64el (10.2.0-1) ...
1063s Selecting previously unselected package x11-common.
1063s Preparing to unpack .../084-x11-common_1%3a7.7+23ubuntu3_all.deb ...
1063s Unpacking x11-common (1:7.7+23ubuntu3) ...
1063s Selecting previously unselected package libice6:ppc64el.
1063s Preparing to unpack .../085-libice6_2%3a1.1.1-1_ppc64el.deb ...
1063s Unpacking libice6:ppc64el (2:1.1.1-1) ...
1063s Selecting previously unselected package libjs-bootstrap.
1063s Preparing to unpack .../086-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
1063s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
1063s Selecting previously unselected package libjs-popper.js.
1063s Preparing to unpack .../087-libjs-popper.js_1.16.1+ds-6_all.deb ...
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1063s Selecting previously unselected package libjs-bootstrap4.
1063s Preparing to unpack .../088-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ...
1063s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ...
1063s Selecting previously unselected package libjs-d3.
1063s Preparing to unpack .../089-libjs-d3_3.5.17-4_all.deb ...
1063s Unpacking libjs-d3 (3.5.17-4) ...
1063s Selecting previously unselected package libjs-es5-shim.
1063s Preparing to unpack .../090-libjs-es5-shim_4.6.7-2_all.deb ...
1063s Unpacking libjs-es5-shim (4.6.7-2) ...
1063s Selecting previously unselected package libjs-highlight.js.
1063s Preparing to unpack .../091-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ...
1063s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ...
1063s Selecting previously unselected package libjs-jquery.
1063s Preparing to unpack .../092-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
1063s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
1063s Selecting previously unselected package libjs-jquery-datatables.
1063s Preparing to unpack .../093-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ...
1063s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ...
1063s Selecting previously unselected package libjs-sifter.js.
1063s Preparing to unpack .../094-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
1063s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
1063s Selecting previously unselected package libjs-microplugin.js.
1063s Preparing to unpack .../095-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ...
1063s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ...
1063s Selecting previously unselected package libjs-jquery-selectize.js.
1063s Preparing to unpack .../096-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
1063s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
1063s Selecting previously unselected package libjs-jquery-ui.
1063s Preparing to unpack .../097-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
1063s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
1063s Selecting previously unselected package libjs-json.
1063s Preparing to unpack .../098-libjs-json_0~20221030+~1.0.8-1_all.deb ...
1063s Unpacking libjs-json (0~20221030+~1.0.8-1) ...
1063s Selecting previously unselected package libjs-prettify.
1063s Preparing to unpack .../099-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ...
1063s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ...
1063s Selecting previously unselected package liblua5.4-0:ppc64el.
1063s Preparing to unpack .../100-liblua5.4-0_5.4.7-1_ppc64el.deb ...
1063s Unpacking liblua5.4-0:ppc64el (5.4.7-1) ...
1063s Selecting previously unselected package libthai-data.
1063s Preparing to unpack .../101-libthai-data_0.1.29-2build1_all.deb ...
1063s Unpacking libthai-data (0.1.29-2build1) ...
1064s Selecting previously unselected package libthai0:ppc64el.
1064s Preparing to unpack .../102-libthai0_0.1.29-2build1_ppc64el.deb ...
1064s Unpacking libthai0:ppc64el (0.1.29-2build1) ...
1064s Selecting previously unselected package libpango-1.0-0:ppc64el.
1064s Preparing to unpack .../103-libpango-1.0-0_1.56.1-1_ppc64el.deb ...
1064s Unpacking libpango-1.0-0:ppc64el (1.56.1-1) ...
1064s Selecting previously unselected package libpangoft2-1.0-0:ppc64el.
1064s Preparing to unpack .../104-libpangoft2-1.0-0_1.56.1-1_ppc64el.deb ...
1064s Unpacking libpangoft2-1.0-0:ppc64el (1.56.1-1) ...
1064s Selecting previously unselected package libpangocairo-1.0-0:ppc64el.
1064s Preparing to unpack .../105-libpangocairo-1.0-0_1.56.1-1_ppc64el.deb ...
1064s Unpacking libpangocairo-1.0-0:ppc64el (1.56.1-1) ...
1064s Selecting previously unselected package libpaper2:ppc64el.
1064s Preparing to unpack .../106-libpaper2_2.2.5-0.3_ppc64el.deb ...
1064s Unpacking libpaper2:ppc64el (2.2.5-0.3) ...
1064s Selecting previously unselected package libpaper-utils.
1064s Preparing to unpack .../107-libpaper-utils_2.2.5-0.3_ppc64el.deb ...
1064s Unpacking libpaper-utils (2.2.5-0.3) ...
1064s Selecting previously unselected package libsm6:ppc64el.
1064s Preparing to unpack .../108-libsm6_2%3a1.2.4-1_ppc64el.deb ...
1064s Unpacking libsm6:ppc64el (2:1.2.4-1) ...
1064s Selecting previously unselected package libtcl8.6:ppc64el.
1064s Preparing to unpack .../109-libtcl8.6_8.6.16+dfsg-1_ppc64el.deb ...
1064s Unpacking libtcl8.6:ppc64el (8.6.16+dfsg-1) ...
1064s Selecting previously unselected package libxft2:ppc64el.
1064s Preparing to unpack .../110-libxft2_2.3.6-1build1_ppc64el.deb ...
1064s Unpacking libxft2:ppc64el (2.3.6-1build1) ...
1064s Selecting previously unselected package libxss1:ppc64el.
1064s Preparing to unpack .../111-libxss1_1%3a1.2.3-1build3_ppc64el.deb ...
1064s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ...
1064s Selecting previously unselected package libtk8.6:ppc64el.
1064s Preparing to unpack .../112-libtk8.6_8.6.16-1_ppc64el.deb ...
1064s Unpacking libtk8.6:ppc64el (8.6.16-1) ...
1064s Selecting previously unselected package libudunits2-data.
1064s Preparing to unpack .../113-libudunits2-data_2.2.28-7build1_all.deb ...
1064s Unpacking libudunits2-data (2.2.28-7build1) ...
1064s Selecting previously unselected package libudunits2-0.
1064s Preparing to unpack .../114-libudunits2-0_2.2.28-7build1_ppc64el.deb ...
1064s Unpacking libudunits2-0 (2.2.28-7build1) ...
1064s Selecting previously unselected package libxt6t64:ppc64el.
1064s Preparing to unpack .../115-libxt6t64_1%3a1.2.1-1.2build1_ppc64el.deb ...
1064s Unpacking libxt6t64:ppc64el (1:1.2.1-1.2build1) ...
1064s Selecting previously unselected package zip.
1064s Preparing to unpack .../116-zip_3.0-14ubuntu2_ppc64el.deb ...
1064s Unpacking zip (3.0-14ubuntu2) ...
1064s Selecting previously unselected package unzip.
1064s Preparing to unpack .../117-unzip_6.0-28ubuntu6_ppc64el.deb ...
1064s Unpacking unzip (6.0-28ubuntu6) ...
1064s Selecting previously unselected package xdg-utils.
1064s Preparing to unpack .../118-xdg-utils_1.2.1-0ubuntu1_all.deb ...
1064s Unpacking xdg-utils (1.2.1-0ubuntu1) ...
1064s Selecting previously unselected package r-base-core.
1064s Preparing to unpack .../119-r-base-core_4.4.2-1build1_ppc64el.deb ...
1064s Unpacking r-base-core (4.4.2-1build1) ...
1065s Selecting previously unselected package r-cran-littler.
1065s Preparing to unpack .../120-r-cran-littler_0.3.20-2_ppc64el.deb ...
1065s Unpacking r-cran-littler (0.3.20-2) ...
1065s Selecting previously unselected package littler.
1065s Preparing to unpack .../121-littler_0.3.20-2_all.deb ...
1065s Unpacking littler (0.3.20-2) ...
1065s Selecting previously unselected package node-bootstrap-sass.
1065s Preparing to unpack .../122-node-bootstrap-sass_3.4.3-2_all.deb ...
1065s Unpacking node-bootstrap-sass (3.4.3-2) ...
1065s Selecting previously unselected package node-html5shiv.
1065s Preparing to unpack .../123-node-html5shiv_3.7.3+dfsg-5_all.deb ...
1065s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
1065s Selecting previously unselected package node-normalize.css.
1065s Preparing to unpack .../124-node-normalize.css_8.0.1-5_all.deb ...
1065s Unpacking node-normalize.css (8.0.1-5) ...
1065s Selecting previously unselected package pandoc-data.
1065s Preparing to unpack .../125-pandoc-data_3.1.11.1-3build1_all.deb ...
1065s Unpacking pandoc-data (3.1.11.1-3build1) ...
1065s Selecting previously unselected package pandoc.
1065s Preparing to unpack .../126-pandoc_3.1.11.1+ds-2_ppc64el.deb ...
1065s Unpacking pandoc (3.1.11.1+ds-2) ...
1067s Selecting previously unselected package r-cran-abind.
1067s Preparing to unpack .../127-r-cran-abind_1.4-8-1_all.deb ...
1067s Unpacking r-cran-abind (1.4-8-1) ...
1067s Selecting previously unselected package r-cran-cli.
1067s Preparing to unpack .../128-r-cran-cli_3.6.3-1_ppc64el.deb ...
1067s Unpacking r-cran-cli (3.6.3-1) ...
1067s Selecting previously unselected package r-cran-generics.
1067s Preparing to unpack .../129-r-cran-generics_0.1.3-1_all.deb ...
1067s Unpacking r-cran-generics (0.1.3-1) ...
1067s Selecting previously unselected package r-cran-glue.
1067s Preparing to unpack .../130-r-cran-glue_1.8.0-1_ppc64el.deb ...
1067s Unpacking r-cran-glue (1.8.0-1) ...
1067s Selecting previously unselected package r-cran-rlang.
1067s Preparing to unpack .../131-r-cran-rlang_1.1.5-1_ppc64el.deb ...
1067s Unpacking r-cran-rlang (1.1.5-1) ...
1067s Selecting previously unselected package r-cran-lifecycle.
1067s Preparing to unpack .../132-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
1067s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
1068s Selecting previously unselected package r-cran-magrittr.
1068s Preparing to unpack .../133-r-cran-magrittr_2.0.3-1_ppc64el.deb ...
1068s Unpacking r-cran-magrittr (2.0.3-1) ...
1068s Selecting previously unselected package r-cran-utf8.
1068s Preparing to unpack .../134-r-cran-utf8_1.2.4-1_ppc64el.deb ...
1068s Unpacking r-cran-utf8 (1.2.4-1) ...
1068s Selecting previously unselected package r-cran-vctrs.
1068s Preparing to unpack .../135-r-cran-vctrs_0.6.5-1_ppc64el.deb ...
1068s Unpacking r-cran-vctrs (0.6.5-1) ...
1068s Selecting previously unselected package r-cran-pillar.
1068s Preparing to unpack .../136-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
1068s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
1068s Selecting previously unselected package r-cran-r6.
1068s Preparing to unpack .../137-r-cran-r6_2.5.1-1_all.deb ...
1068s Unpacking r-cran-r6 (2.5.1-1) ...
1068s Selecting previously unselected package r-cran-fansi.
1068s Preparing to unpack .../138-r-cran-fansi_1.0.5-1_ppc64el.deb ...
1068s Unpacking r-cran-fansi (1.0.5-1) ...
1068s Selecting previously unselected package r-cran-pkgconfig.
1068s Preparing to unpack .../139-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
1068s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
1068s Selecting previously unselected package r-cran-tibble.
1068s Preparing to unpack .../140-r-cran-tibble_3.2.1+dfsg-3_ppc64el.deb ...
1068s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
1068s Selecting previously unselected package r-cran-withr.
1068s Preparing to unpack .../141-r-cran-withr_3.0.2+dfsg-1_all.deb ...
1068s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
1068s Selecting previously unselected package r-cran-tidyselect.
1068s Preparing to unpack .../142-r-cran-tidyselect_1.2.1+dfsg-1_ppc64el.deb ...
1068s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
1068s Selecting previously unselected package r-cran-dplyr.
1068s Preparing to unpack .../143-r-cran-dplyr_1.1.4-4_ppc64el.deb ...
1068s Unpacking r-cran-dplyr (1.1.4-4) ...
1068s Selecting previously unselected package r-cran-purrr.
1068s Preparing to unpack .../144-r-cran-purrr_1.0.2-1_ppc64el.deb ...
1068s Unpacking r-cran-purrr (1.0.2-1) ...
1068s Selecting previously unselected package r-cran-mass.
1068s Preparing to unpack .../145-r-cran-mass_7.3-64-1_ppc64el.deb ...
1068s Unpacking r-cran-mass (7.3-64-1) ...
1068s Selecting previously unselected package r-cran-class.
1068s Preparing to unpack .../146-r-cran-class_7.3-23-1_ppc64el.deb ...
1068s Unpacking r-cran-class (7.3-23-1) ...
1068s Selecting previously unselected package r-cran-proxy.
1068s Preparing to unpack .../147-r-cran-proxy_0.4-27-1_ppc64el.deb ...
1068s Unpacking r-cran-proxy (0.4-27-1) ...
1068s Selecting previously unselected package r-cran-e1071.
1068s Preparing to unpack .../148-r-cran-e1071_1.7-16-1_ppc64el.deb ...
1068s Unpacking r-cran-e1071 (1.7-16-1) ...
1068s Selecting previously unselected package r-cran-kernsmooth.
1068s Preparing to unpack .../149-r-cran-kernsmooth_2.23-26-1_ppc64el.deb ...
1068s Unpacking r-cran-kernsmooth (2.23-26-1) ...
1068s Selecting previously unselected package r-cran-classint.
1068s Preparing to unpack .../150-r-cran-classint_0.4-11+dfsg-1_ppc64el.deb ...
1068s Unpacking r-cran-classint (0.4-11+dfsg-1) ...
1068s Selecting previously unselected package r-cran-dbi.
1068s Preparing to unpack .../151-r-cran-dbi_1.2.3-1_all.deb ...
1068s Unpacking r-cran-dbi (1.2.3-1) ...
1069s Selecting previously unselected package r-cran-pkgkitten.
1069s Preparing to unpack .../152-r-cran-pkgkitten_0.2.4-1_all.deb ...
1069s Unpacking r-cran-pkgkitten (0.2.4-1) ...
1069s Selecting previously unselected package r-cran-rcpp.
1069s Preparing to unpack .../153-r-cran-rcpp_1.0.14-1_ppc64el.deb ...
1069s Unpacking r-cran-rcpp (1.0.14-1) ...
1069s Selecting previously unselected package r-cran-wk.
1069s Preparing to unpack .../154-r-cran-wk_0.9.4-1_ppc64el.deb ...
1069s Unpacking r-cran-wk (0.9.4-1) ...
1069s Selecting previously unselected package r-cran-s2.
1069s Preparing to unpack .../155-r-cran-s2_1.1.7-1_ppc64el.deb ...
1069s Unpacking r-cran-s2 (1.1.7-1) ...
1069s Selecting previously unselected package r-cran-units.
1069s Preparing to unpack .../156-r-cran-units_0.8-5+dfsg-1_ppc64el.deb ...
1069s Unpacking r-cran-units (0.8-5+dfsg-1) ...
1069s Selecting previously unselected package r-cran-sf.
1069s Preparing to unpack .../157-r-cran-sf_1.0-19+dfsg-1_ppc64el.deb ...
1069s Unpacking r-cran-sf (1.0-19+dfsg-1) ...
1069s Selecting previously unselected package r-cran-areal.
1069s Preparing to unpack .../158-r-cran-areal_0.1.8+dfsg-2_all.deb ...
1069s Unpacking r-cran-areal (0.1.8+dfsg-2) ...
1069s Selecting previously unselected package r-cran-sys.
1069s Preparing to unpack .../159-r-cran-sys_3.4.3-1_ppc64el.deb ...
1069s Unpacking r-cran-sys (3.4.3-1) ...
1069s Selecting previously unselected package r-cran-askpass.
1069s Preparing to unpack .../160-r-cran-askpass_1.2.1-1_ppc64el.deb ...
1069s Unpacking r-cran-askpass (1.2.1-1) ...
1069s Selecting previously unselected package r-cran-base64enc.
1069s Preparing to unpack .../161-r-cran-base64enc_0.1-3-3_ppc64el.deb ...
1069s Unpacking r-cran-base64enc (0.1-3-3) ...
1069s Selecting previously unselected package r-cran-bdsmatrix.
1069s Preparing to unpack .../162-r-cran-bdsmatrix_1.3-7-1_ppc64el.deb ...
1069s Unpacking r-cran-bdsmatrix (1.3-7-1) ...
1069s Selecting previously unselected package r-cran-brio.
1069s Preparing to unpack .../163-r-cran-brio_1.1.5-1_ppc64el.deb ...
1069s Unpacking r-cran-brio (1.1.5-1) ...
1069s Selecting previously unselected package r-cran-fastmap.
1069s Preparing to unpack .../164-r-cran-fastmap_1.2.0-1_ppc64el.deb ...
1069s Unpacking r-cran-fastmap (1.2.0-1) ...
1069s Selecting previously unselected package r-cran-cachem.
1069s Preparing to unpack .../165-r-cran-cachem_1.1.0-1_ppc64el.deb ...
1069s Unpacking r-cran-cachem (1.1.0-1) ...
1069s Selecting previously unselected package r-cran-digest.
1069s Preparing to unpack .../166-r-cran-digest_0.6.37-1_ppc64el.deb ...
1069s Unpacking r-cran-digest (0.6.37-1) ...
1069s Selecting previously unselected package r-cran-htmltools.
1069s Preparing to unpack .../167-r-cran-htmltools_0.5.8.1-1_ppc64el.deb ...
1069s Unpacking r-cran-htmltools (0.5.8.1-1) ...
1069s Selecting previously unselected package r-cran-jquerylib.
1070s Preparing to unpack .../168-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ...
1070s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ...
1070s Selecting previously unselected package r-cran-jsonlite.
1070s Preparing to unpack .../169-r-cran-jsonlite_1.8.9+dfsg-1_ppc64el.deb ...
1070s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ...
1070s Selecting previously unselected package r-cran-memoise.
1070s Preparing to unpack .../170-r-cran-memoise_2.0.1-1_all.deb ...
1070s Unpacking r-cran-memoise (2.0.1-1) ...
1070s Selecting previously unselected package r-cran-mime.
1070s Preparing to unpack .../171-r-cran-mime_0.12-2_ppc64el.deb ...
1070s Unpacking r-cran-mime (0.12-2) ...
1070s Selecting previously unselected package r-cran-fs.
1070s Preparing to unpack .../172-r-cran-fs_1.6.5+dfsg-1_ppc64el.deb ...
1070s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
1070s Selecting previously unselected package r-cran-rappdirs.
1070s Preparing to unpack .../173-r-cran-rappdirs_0.3.3-1_ppc64el.deb ...
1070s Unpacking r-cran-rappdirs (0.3.3-1) ...
1070s Selecting previously unselected package r-cran-sass.
1070s Preparing to unpack .../174-r-cran-sass_0.4.9+dfsg-1_ppc64el.deb ...
1070s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
1070s Selecting previously unselected package r-cran-bslib.
1070s Preparing to unpack .../175-r-cran-bslib_0.8.0+dfsg-1_all.deb ...
1070s Unpacking r-cran-bslib (0.8.0+dfsg-1) ...
1070s Selecting previously unselected package r-cran-cairo.
1070s Preparing to unpack .../176-r-cran-cairo_1.6-2-1_ppc64el.deb ...
1070s Unpacking r-cran-cairo (1.6-2-1) ...
1070s Selecting previously unselected package r-cran-ps.
1070s Preparing to unpack .../177-r-cran-ps_1.8.1-1_ppc64el.deb ...
1070s Unpacking r-cran-ps (1.8.1-1) ...
1070s Selecting previously unselected package r-cran-processx.
1070s Preparing to unpack .../178-r-cran-processx_3.8.5-1_ppc64el.deb ...
1070s Unpacking r-cran-processx (3.8.5-1) ...
1070s Selecting previously unselected package r-cran-callr.
1070s Preparing to unpack .../179-r-cran-callr_3.7.6-1_all.deb ...
1070s Unpacking r-cran-callr (3.7.6-1) ...
1070s Selecting previously unselected package r-cran-cluster.
1070s Preparing to unpack .../180-r-cran-cluster_2.1.8-1_ppc64el.deb ...
1070s Unpacking r-cran-cluster (2.1.8-1) ...
1070s Selecting previously unselected package r-cran-clue.
1070s Preparing to unpack .../181-r-cran-clue_0.3-66-1_ppc64el.deb ...
1070s Unpacking r-cran-clue (0.3-66-1) ...
1070s Selecting previously unselected package r-cran-codetools.
1070s Preparing to unpack .../182-r-cran-codetools_0.2-20-1_all.deb ...
1070s Unpacking r-cran-codetools (0.2-20-1) ...
1070s Selecting previously unselected package r-cran-collapse.
1070s Preparing to unpack .../183-r-cran-collapse_2.0.19-1_ppc64el.deb ...
1070s Unpacking r-cran-collapse (2.0.19-1) ...
1071s Selecting previously unselected package r-cran-colorspace.
1071s Preparing to unpack .../184-r-cran-colorspace_2.1-1+dfsg-1_ppc64el.deb ...
1071s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
1071s Selecting previously unselected package r-cran-commonmark.
1071s Preparing to unpack .../185-r-cran-commonmark_1.9.2-2_ppc64el.deb ...
1071s Unpacking r-cran-commonmark (1.9.2-2) ...
1071s Selecting previously unselected package r-cran-lazyeval.
1071s Preparing to unpack .../186-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ...
1071s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
1071s Selecting previously unselected package r-cran-rex.
1071s Preparing to unpack .../187-r-cran-rex_1.2.1-1_all.deb ...
1071s Unpacking r-cran-rex (1.2.1-1) ...
1071s Selecting previously unselected package r-cran-curl.
1071s Preparing to unpack .../188-r-cran-curl_6.1.0+dfsg-1_ppc64el.deb ...
1071s Unpacking r-cran-curl (6.1.0+dfsg-1) ...
1071s Selecting previously unselected package r-cran-openssl.
1071s Preparing to unpack .../189-r-cran-openssl_2.2.0+dfsg-1_ppc64el.deb ...
1071s Unpacking r-cran-openssl (2.2.0+dfsg-1) ...
1071s Selecting previously unselected package r-cran-httr.
1071s Preparing to unpack .../190-r-cran-httr_1.4.7+dfsg-1_all.deb ...
1071s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
1071s Selecting previously unselected package r-cran-crayon.
1071s Preparing to unpack .../191-r-cran-crayon_1.5.3-1_all.deb ...
1071s Unpacking r-cran-crayon (1.5.3-1) ...
1071s Selecting previously unselected package r-cran-yaml.
1071s Preparing to unpack .../192-r-cran-yaml_2.3.10-1_ppc64el.deb ...
1071s Unpacking r-cran-yaml (2.3.10-1) ...
1071s Selecting previously unselected package r-cran-covr.
1071s Preparing to unpack .../193-r-cran-covr_3.6.4+dfsg-1_ppc64el.deb ...
1071s Unpacking r-cran-covr (3.6.4+dfsg-1) ...
1071s Selecting previously unselected package r-cran-cpp11.
1071s Preparing to unpack .../194-r-cran-cpp11_0.5.1-1_all.deb ...
1071s Unpacking r-cran-cpp11 (0.5.1-1) ...
1071s Selecting previously unselected package r-cran-cubelyr.
1071s Preparing to unpack .../195-r-cran-cubelyr_1.0.2-1_all.deb ...
1071s Unpacking r-cran-cubelyr (1.0.2-1) ...
1071s Selecting previously unselected package r-cran-deldir.
1071s Preparing to unpack .../196-r-cran-deldir_2.0-4-1build1_ppc64el.deb ...
1071s Unpacking r-cran-deldir (2.0-4-1build1) ...
1071s Selecting previously unselected package r-cran-desc.
1071s Preparing to unpack .../197-r-cran-desc_1.4.3-1_all.deb ...
1071s Unpacking r-cran-desc (1.4.3-1) ...
1071s Selecting previously unselected package r-cran-diffobj.
1071s Preparing to unpack .../198-r-cran-diffobj_0.3.5-1_ppc64el.deb ...
1071s Unpacking r-cran-diffobj (0.3.5-1) ...
1071s Selecting previously unselected package r-cran-evaluate.
1072s Preparing to unpack .../199-r-cran-evaluate_1.0.3-1_all.deb ...
1072s Unpacking r-cran-evaluate (1.0.3-1) ...
1072s Selecting previously unselected package r-cran-lattice.
1072s Preparing to unpack .../200-r-cran-lattice_0.22-6-1_ppc64el.deb ...
1072s Unpacking r-cran-lattice (0.22-6-1) ...
1072s Selecting previously unselected package r-cran-sp.
1072s Preparing to unpack .../201-r-cran-sp_1%3a2.1-4+dfsg-1_ppc64el.deb ...
1072s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ...
1072s Selecting previously unselected package r-cran-terra.
1072s Preparing to unpack .../202-r-cran-terra_1.8-10-1_ppc64el.deb ...
1072s Unpacking r-cran-terra (1.8-10-1) ...
1072s Selecting previously unselected package r-cran-raster.
1072s Preparing to unpack .../203-r-cran-raster_3.6-31-1_ppc64el.deb ...
1072s Unpacking r-cran-raster (3.6-31-1) ...
1072s Selecting previously unselected package r-cran-exactextractr.
1072s Preparing to unpack .../204-r-cran-exactextractr_0.10.0-1build2_ppc64el.deb ...
1072s Unpacking r-cran-exactextractr (0.10.0-1build2) ...
1072s Selecting previously unselected package r-cran-farver.
1072s Preparing to unpack .../205-r-cran-farver_2.1.2-1_ppc64el.deb ...
1072s Unpacking r-cran-farver (2.1.2-1) ...
1072s Selecting previously unselected package r-cran-fnn.
1072s Preparing to unpack .../206-r-cran-fnn_1.1.4.1-1_ppc64el.deb ...
1072s Unpacking r-cran-fnn (1.1.4.1-1) ...
1072s Selecting previously unselected package r-cran-fontawesome.
1072s Preparing to unpack .../207-r-cran-fontawesome_0.5.3-1_all.deb ...
1072s Unpacking r-cran-fontawesome (0.5.3-1) ...
1072s Selecting previously unselected package r-cran-formula.
1072s Preparing to unpack .../208-r-cran-formula_1.2-5-1_all.deb ...
1072s Unpacking r-cran-formula (1.2-5-1) ...
1072s Selecting previously unselected package r-cran-globals.
1072s Preparing to unpack .../209-r-cran-globals_0.16.3-1_all.deb ...
1072s Unpacking r-cran-globals (0.16.3-1) ...
1072s Selecting previously unselected package r-cran-listenv.
1072s Preparing to unpack .../210-r-cran-listenv_0.9.1+dfsg-1_all.deb ...
1072s Unpacking r-cran-listenv (0.9.1+dfsg-1) ...
1072s Selecting previously unselected package r-cran-parallelly.
1072s Preparing to unpack .../211-r-cran-parallelly_1.41.0-1_ppc64el.deb ...
1072s Unpacking r-cran-parallelly (1.41.0-1) ...
1072s Selecting previously unselected package r-cran-future.
1072s Preparing to unpack .../212-r-cran-future_1.34.0+dfsg-1_all.deb ...
1072s Unpacking r-cran-future (1.34.0+dfsg-1) ...
1072s Selecting previously unselected package r-cran-future.apply.
1072s Preparing to unpack .../213-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
1072s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
1072s Selecting previously unselected package r-cran-gtable.
1072s Preparing to unpack .../214-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
1072s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
1072s Selecting previously unselected package r-cran-isoband.
1072s Preparing to unpack .../215-r-cran-isoband_0.2.7-1_ppc64el.deb ...
1072s Unpacking r-cran-isoband (0.2.7-1) ...
1072s Selecting previously unselected package r-cran-nlme.
1072s Preparing to unpack .../216-r-cran-nlme_3.1.167-1_ppc64el.deb ...
1072s Unpacking r-cran-nlme (3.1.167-1) ...
1072s Selecting previously unselected package r-cran-matrix.
1072s Preparing to unpack .../217-r-cran-matrix_1.7-2-1_ppc64el.deb ...
1072s Unpacking r-cran-matrix (1.7-2-1) ...
1073s Selecting previously unselected package r-cran-mgcv.
1073s Preparing to unpack .../218-r-cran-mgcv_1.9-1-1_ppc64el.deb ...
1073s Unpacking r-cran-mgcv (1.9-1-1) ...
1073s Selecting previously unselected package r-cran-labeling.
1073s Preparing to unpack .../219-r-cran-labeling_0.4.3-1_all.deb ...
1073s Unpacking r-cran-labeling (0.4.3-1) ...
1073s Selecting previously unselected package r-cran-munsell.
1073s Preparing to unpack .../220-r-cran-munsell_0.5.1-1_all.deb ...
1073s Unpacking r-cran-munsell (0.5.1-1) ...
1073s Selecting previously unselected package r-cran-rcolorbrewer.
1073s Preparing to unpack .../221-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
1073s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
1073s Selecting previously unselected package r-cran-viridislite.
1073s Preparing to unpack .../222-r-cran-viridislite_0.4.2-2_all.deb ...
1073s Unpacking r-cran-viridislite (0.4.2-2) ...
1073s Selecting previously unselected package r-cran-scales.
1073s Preparing to unpack .../223-r-cran-scales_1.3.0-1_all.deb ...
1073s Unpacking r-cran-scales (1.3.0-1) ...
1073s Selecting previously unselected package r-cran-ggplot2.
1073s Preparing to unpack .../224-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
1073s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
1073s Selecting previously unselected package r-cran-tweenr.
1073s Preparing to unpack .../225-r-cran-tweenr_2.0.3-1_ppc64el.deb ...
1073s Unpacking r-cran-tweenr (2.0.3-1) ...
1073s Selecting previously unselected package r-cran-polyclip.
1073s Preparing to unpack .../226-r-cran-polyclip_1.10-7-1_ppc64el.deb ...
1073s Unpacking r-cran-polyclip (1.10-7-1) ...
1073s Selecting previously unselected package r-cran-systemfonts.
1073s Preparing to unpack .../227-r-cran-systemfonts_1.2.1-1_ppc64el.deb ...
1073s Unpacking r-cran-systemfonts (1.2.1-1) ...
1073s Selecting previously unselected package r-cran-rcppeigen.
1073s Preparing to unpack .../228-r-cran-rcppeigen_0.3.4.0.2-1_ppc64el.deb ...
1073s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
1073s Selecting previously unselected package r-cran-ggforce.
1073s Preparing to unpack .../229-r-cran-ggforce_0.4.2-1_ppc64el.deb ...
1073s Unpacking r-cran-ggforce (0.4.2-1) ...
1073s Selecting previously unselected package r-cran-stringi.
1073s Preparing to unpack .../230-r-cran-stringi_1.8.4-1build1_ppc64el.deb ...
1073s Unpacking r-cran-stringi (1.8.4-1build1) ...
1073s Selecting previously unselected package r-cran-stringr.
1073s Preparing to unpack .../231-r-cran-stringr_1.5.1-1_all.deb ...
1073s Unpacking r-cran-stringr (1.5.1-1) ...
1073s Selecting previously unselected package r-cran-ggthemes.
1073s Preparing to unpack .../232-r-cran-ggthemes_5.1.0-1_all.deb ...
1073s Unpacking r-cran-ggthemes (5.1.0-1) ...
1073s Selecting previously unselected package r-cran-goftest.
1073s Preparing to unpack .../233-r-cran-goftest_1.2-3-1_ppc64el.deb ...
1073s Unpacking r-cran-goftest (1.2-3-1) ...
1074s Selecting previously unselected package r-cran-gridextra.
1074s Preparing to unpack .../234-r-cran-gridextra_2.3-3build1_all.deb ...
1074s Unpacking r-cran-gridextra (2.3-3build1) ...
1074s Selecting previously unselected package r-cran-zoo.
1074s Preparing to unpack .../235-r-cran-zoo_1.8-12-2_ppc64el.deb ...
1074s Unpacking r-cran-zoo (1.8-12-2) ...
1074s Selecting previously unselected package r-cran-sftime.
1074s Preparing to unpack .../236-r-cran-sftime_0.2-0-6_all.deb ...
1074s Unpacking r-cran-sftime (0.2-0-6) ...
1074s Selecting previously unselected package r-cran-xts.
1074s Preparing to unpack .../237-r-cran-xts_0.14.1-1_ppc64el.deb ...
1074s Unpacking r-cran-xts (0.14.1-1) ...
1074s Selecting previously unselected package r-cran-intervals.
1074s Preparing to unpack .../238-r-cran-intervals_0.15.5-1_ppc64el.deb ...
1074s Unpacking r-cran-intervals (0.15.5-1) ...
1074s Selecting previously unselected package r-cran-spacetime.
1074s Preparing to unpack .../239-r-cran-spacetime_1.3-2-2_all.deb ...
1074s Unpacking r-cran-spacetime (1.3-2-2) ...
1074s Selecting previously unselected package r-cran-stars.
1074s Preparing to unpack .../240-r-cran-stars_0.6-7-1_all.deb ...
1074s Unpacking r-cran-stars (0.6-7-1) ...
1074s Selecting previously unselected package r-cran-gstat.
1074s Preparing to unpack .../241-r-cran-gstat_2.1-2-1_ppc64el.deb ...
1074s Unpacking r-cran-gstat (2.1-2-1) ...
1074s Selecting previously unselected package r-cran-xfun.
1074s Preparing to unpack .../242-r-cran-xfun_0.50+dfsg-1_ppc64el.deb ...
1074s Unpacking r-cran-xfun (0.50+dfsg-1) ...
1074s Selecting previously unselected package r-cran-highr.
1074s Preparing to unpack .../243-r-cran-highr_0.11+dfsg-1_all.deb ...
1074s Unpacking r-cran-highr (0.11+dfsg-1) ...
1074s Selecting previously unselected package r-cran-later.
1074s Preparing to unpack .../244-r-cran-later_1.4.1+dfsg-1_ppc64el.deb ...
1074s Unpacking r-cran-later (1.4.1+dfsg-1) ...
1074s Selecting previously unselected package r-cran-promises.
1074s Preparing to unpack .../245-r-cran-promises_1.3.2+dfsg-1_ppc64el.deb ...
1074s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
1074s Selecting previously unselected package r-cran-httpuv.
1074s Preparing to unpack .../246-r-cran-httpuv_1.6.15+dfsg-1_ppc64el.deb ...
1074s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
1074s Selecting previously unselected package libjs-mathjax.
1074s Preparing to unpack .../247-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
1074s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
1075s Selecting previously unselected package r-cran-knitr.
1075s Preparing to unpack .../248-r-cran-knitr_1.49+dfsg-1_all.deb ...
1075s Unpacking r-cran-knitr (1.49+dfsg-1) ...
1076s Selecting previously unselected package r-cran-lmtest.
1076s Preparing to unpack .../249-r-cran-lmtest_0.9.40-1_ppc64el.deb ...
1076s Unpacking r-cran-lmtest (0.9.40-1) ...
1076s Selecting previously unselected package r-cran-lwgeom.
1076s Preparing to unpack .../250-r-cran-lwgeom_0.2-14-1_ppc64el.deb ...
1076s Unpacking r-cran-lwgeom (0.2-14-1) ...
1076s Selecting previously unselected package r-cran-maps.
1076s Preparing to unpack .../251-r-cran-maps_3.4.2-1_ppc64el.deb ...
1076s Unpacking r-cran-maps (3.4.2-1) ...
1076s Selecting previously unselected package r-cran-mapdata.
1076s Preparing to unpack .../252-r-cran-mapdata_2.3.1-1_ppc64el.deb ...
1076s Unpacking r-cran-mapdata (2.3.1-1) ...
1076s Selecting previously unselected package r-cran-misctools.
1076s Preparing to unpack .../253-r-cran-misctools_0.6-28-1_all.deb ...
1076s Unpacking r-cran-misctools (0.6-28-1) ...
1076s Selecting previously unselected package r-cran-sandwich.
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1076s Selecting previously unselected package r-cran-maxlik.
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1076s Selecting previously unselected package r-cran-rnetcdf.
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1077s Selecting previously unselected package r-cran-tidyr.
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1077s Selecting previously unselected package r-cran-ncmeta.
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1077s Selecting previously unselected package r-cran-ncdfgeom.
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1077s Selecting previously unselected package r-cran-pbapply.
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1083s Setting up r-cran-collapse (2.0.19-1) ...
1083s Setting up r-cran-bdsmatrix (1.3-7-1) ...
1083s Setting up r-cran-glue (1.8.0-1) ...
1083s Setting up r-cran-xtable (1:1.8-4-2) ...
1083s Setting up r-cran-polyclip (1.10-7-1) ...
1083s Setting up r-cran-clue (0.3-66-1) ...
1083s Setting up r-cran-cli (3.6.3-1) ...
1083s Setting up r-cran-rbibutils (2.3-1) ...
1083s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
1083s Setting up r-cran-rprojroot (2.0.4-2) ...
1083s Setting up r-cran-fnn (1.1.4.1-1) ...
1083s Setting up r-cran-deldir (2.0-4-1build1) ...
1083s Setting up r-cran-goftest (1.2-3-1) ...
1083s Setting up r-cran-randomforest (4.7-1.2-1) ...
1083s Setting up r-cran-askpass (1.2.1-1) ...
1083s Setting up r-cran-fastmap (1.2.0-1) ...
1083s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
1083s Setting up r-cran-rnetcdf (2.9-1-1build2) ...
1083s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
1083s Setting up r-cran-sp (1:2.1-4+dfsg-1) ...
1083s Setting up r-cran-utf8 (1.2.4-1) ...
1083s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
1083s Setting up r-cran-parallelly (1.41.0-1) ...
1083s Setting up r-cran-stringi (1.8.4-1build1) ...
1083s Setting up r-cran-rex (1.2.1-1) ...
1083s Setting up r-cran-cpp11 (0.5.1-1) ...
1083s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
1083s Setting up r-cran-isoband (0.2.7-1) ...
1083s Setting up r-cran-waldo (0.6.1-1) ...
1083s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
1083s Setting up r-cran-zoo (1.8-12-2) ...
1083s Setting up r-cran-units (0.8-5+dfsg-1) ...
1083s Setting up r-cran-later (1.4.1+dfsg-1) ...
1083s Setting up r-cran-matrix (1.7-2-1) ...
1083s Setting up r-cran-spatstat.sparse (3.1-0-1) ...
1083s Setting up r-cran-htmltools (0.5.8.1-1) ...
1083s Setting up r-cran-tinytex (0.54-1) ...
1083s Setting up r-cran-kernsmooth (2.23-26-1) ...
1083s Setting up r-cran-knitr (1.49+dfsg-1) ...
1083s Setting up r-cran-mgcv (1.9-1-1) ...
1083s Setting up r-cran-cachem (1.1.0-1) ...
1083s Setting up r-cran-lmtest (0.9.40-1) ...
1083s Setting up r-cran-sass (0.4.9+dfsg-1) ...
1083s Setting up r-cran-globals (0.16.3-1) ...
1083s Setting up r-cran-vctrs (0.6.5-1) ...
1083s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
1083s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
1083s Setting up r-cran-openssl (2.2.0+dfsg-1) ...
1083s Setting up r-cran-misctools (0.6-28-1) ...
1083s Setting up r-cran-stringr (1.5.1-1) ...
1083s Setting up r-cran-class (7.3-23-1) ...
1083s Setting up r-cran-callr (3.7.6-1) ...
1083s Setting up r-cran-desc (1.4.3-1) ...
1083s Setting up r-cran-munsell (0.5.1-1) ...
1083s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
1083s Setting up r-cran-sandwich (3.1-1-1) ...
1083s Setting up r-cran-fontawesome (0.5.3-1) ...
1083s Setting up r-cran-survival (3.8-3-1) ...
1083s Setting up r-cran-xts (0.14.1-1) ...
1083s Setting up r-cran-rdpack (2.6.2-1) ...
1083s Setting up r-cran-tweenr (2.0.3-1) ...
1083s Setting up r-cran-future (1.34.0+dfsg-1) ...
1083s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
1083s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
1083s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
1083s Setting up r-cran-systemfonts (1.2.1-1) ...
1083s Setting up r-cran-httr (1.4.7+dfsg-1) ...
1083s Setting up r-cran-gridextra (2.3-3build1) ...
1083s Setting up r-cran-scales (1.3.0-1) ...
1083s Setting up r-cran-memoise (2.0.1-1) ...
1083s Setting up r-cran-covr (3.6.4+dfsg-1) ...
1083s Setting up r-cran-promises (1.3.2+dfsg-1) ...
1083s Setting up r-cran-purrr (1.0.2-1) ...
1083s Setting up r-cran-e1071 (1.7-16-1) ...
1083s Setting up r-cran-spatstat.data (3.1-4-1) ...
1083s Setting up r-cran-maxlik (1.5-2.1-1) ...
1083s Setting up r-cran-spacetime (1.3-2-2) ...
1083s Setting up r-cran-spatstat.geom (3.2-9-2) ...
1083s Setting up r-cran-pkgbuild (1.4.6-1) ...
1083s Setting up r-cran-dplyr (1.1.4-4) ...
1083s Setting up r-cran-cubelyr (1.0.2-1) ...
1083s Setting up r-cran-pkgload (1.4.0-1) ...
1083s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
1083s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
1083s Setting up r-cran-rpart (4.1.24-1) ...
1083s Setting up r-cran-spatstat.random (3.2-3-1) ...
1083s Setting up r-cran-plm (2.6-5-1) ...
1083s Setting up r-cran-viridis (0.6.5-1) ...
1083s Setting up r-cran-testthat (3.2.3-1) ...
1083s Setting up r-cran-classint (0.4-11+dfsg-1) ...
1083s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
1083s Setting up r-cran-spatstat.explore (3.2-7-1) ...
1083s Setting up r-cran-ggthemes (5.1.0-1) ...
1083s Setting up r-cran-tidyr (1.3.1-1) ...
1083s Setting up r-cran-ggforce (0.4.2-1) ...
1083s Setting up r-cran-spatstat.model (3.2-11-1) ...
1083s Setting up r-cran-shiny (1.9.1+dfsg-1) ...
1083s Setting up r-cran-ncmeta (0.3.6-1) ...
1083s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
1083s Setting up r-cran-spatstat.linnet (3.1-5-1) ...
1083s Setting up r-cran-spatstat (3.0-8-1) ...
1083s Setting up libheif-plugin-aomdec:ppc64el (1.19.5-1build1) ...
1083s Setting up libheif-plugin-libde265:ppc64el (1.19.5-1build1) ...
1083s Setting up libheif1:ppc64el (1.19.5-1build1) ...
1083s Setting up libgdal36:ppc64el (3.10.1+dfsg-1build2) ...
1083s Setting up r-cran-sf (1.0-19+dfsg-1) ...
1083s Setting up r-cran-stars (0.6-7-1) ...
1083s Setting up r-cran-sftime (0.2-0-6) ...
1083s Setting up r-cran-areal (0.1.8+dfsg-2) ...
1083s Setting up r-cran-gstat (2.1-2-1) ...
1083s Setting up r-cran-lwgeom (0.2-14-1) ...
1083s Setting up r-cran-terra (1.8-10-1) ...
1083s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ...
1083s Setting up r-cran-raster (3.6-31-1) ...
1083s Setting up r-cran-exactextractr (0.10.0-1build2) ...
1083s Processing triggers for install-info (7.1.1-1) ...
1083s Processing triggers for libc-bin (2.40-4ubuntu1) ...
1083s Processing triggers for man-db (2.13.0-1) ...
1087s autopkgtest [10:28:28]: test run-unit-test: [-----------------------
1088s BEGIN TEST aggregate.R
1088s 
1088s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1088s Copyright (C) 2024 The R Foundation for Statistical Computing
1088s Platform: powerpc64le-unknown-linux-gnu
1088s 
1088s R is free software and comes with ABSOLUTELY NO WARRANTY.
1088s You are welcome to redistribute it under certain conditions.
1088s Type 'license()' or 'licence()' for distribution details.
1088s 
1088s R is a collaborative project with many contributors.
1088s Type 'contributors()' for more information and
1088s 'citation()' on how to cite R or R packages in publications.
1088s 
1088s Type 'demo()' for some demos, 'help()' for on-line help, or
1088s 'help.start()' for an HTML browser interface to help.
1088s Type 'q()' to quit R.
1088s 
1088s > ## IGNORE_RDIFF_BEGIN
1088s > library(stars)
1088s Loading required package: abind
1088s Loading required package: sf
1088s Linking to GEOS 3.13.0, GDAL 3.10.1, PROJ 9.5.1; sf_use_s2() is TRUE
1089s > ## IGNORE_RDIFF_END
1089s > 
1089s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) {
1089s + data(air) # this loads several datasets in .GlobalEnv
1089s + dim(air)
1089s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates)
1089s + 
1089s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326),
1089s + 	n = c(3,3))
1089s + 
1089s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d))
1089s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE))
1089s + }
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s       Min. 1st Qu. Median     Mean 3rd Qu.    Max.   NA's
1090s PM10     0   9.921 14.792 17.69728  21.992 274.333 157659
1090s dimension(s):
1090s         from   to     offset  delta refsys point
1090s station    1   70         NA     NA WGS 84  TRUE
1090s time       1 4383 1998-01-01 1 days   Date FALSE
1090s                                                          values
1090s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068)
1090s time                                                       NULL
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s       Min. 1st Qu.   Median    Mean  3rd Qu.    Max. NA's
1090s PM10     1      11 15.57425 18.1715 22.17197 183.271 8429
1090s dimension(s):
1090s          from   to     offset  delta refsys point
1090s geometry    1    9         NA     NA WGS 84 FALSE
1090s time        1 4383 1998-01-01 1 days   Date FALSE
1090s                                                                 values
1090s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460...
1090s time                                                              NULL
1090s > 
1090s > # adapted from ?read_stars:
1090s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim
1090s > st = st_as_stars(m)
1090s > attr(st, "dimensions")$y$delta = -1
1090s > attr(st, "dimensions")$y$offset = 12
1090s > tm = as.Date("2019-02-19") + 1:6
1090s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326)
1090s > 
1090s > tmp = tempfile(fileext = ".tif")
1090s > write_stars(st, tmp)
1090s > 
1090s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12,
1090s +    nBufXSize = 2, nBufYSize = 2)), "foo"))
1090s stars object with 3 dimensions and 1 attribute
1090s attribute(s):
1090s      Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s foo    33  199.25  365.5 365.5  531.75  698
1090s dimension(s):
1090s      from to offset delta refsys point x/y
1090s x       1  2      0     5 WGS 84 FALSE [x]
1090s y       1  2     12    -6 WGS 84 FALSE [y]
1090s band    1  6     NA    NA     NA    NA    
1090s > 
1090s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st))
1090s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean))
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s A1    28  194.25  360.5 360.5  526.75  693
1090s dimension(s):
1090s      from to     offset  delta refsys point
1090s geom    1  4         NA     NA WGS 84 FALSE
1090s t       1  6 2019-02-20 1 days   Date FALSE
1090s                                                             values
1090s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0...
1090s t                                                             NULL
1090s > (a = aggregate(st, sfc, mean))
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s A1    28  194.25  360.5 360.5  526.75  693
1090s dimension(s):
1090s          from to     offset  delta refsys point
1090s geometry    1  4         NA     NA WGS 84 FALSE
1090s t           1  6 2019-02-20 1 days   Date FALSE
1090s                                                                 values
1090s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0...
1090s t                                                                 NULL
1090s > 
1090s > tm0 = as.Date("2019-02-19") + -1:8
1090s > (a = aggregate(st, tm0, mean, na.rm = TRUE))
1090s stars object with 3 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max. NA's
1090s A1     1  180.75  360.5 360.5  540.25  720  480
1090s dimension(s):
1090s      from to     offset  delta refsys point x/y
1090s time    1 10 2019-02-18 1 days   Date    NA    
1090s x       1 10          0      1 WGS 84 FALSE [x]
1090s y       1 12         12     -1 WGS 84 FALSE [y]
1090s > (a = aggregate(st, "days", mean, na.rm = TRUE))
1090s stars object with 3 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s A1     1  180.75  360.5 360.5  540.25  720
1090s dimension(s):
1090s      from to     offset  delta refsys point x/y
1090s time    1  6 2019-02-20 1 days   Date    NA    
1090s x       1 10          0      1 WGS 84 FALSE [x]
1090s y       1 12         12     -1 WGS 84 FALSE [y]
1090s > yd = function(x) as.POSIXlt(x)$yday
1090s > (a = aggregate(st, yd, mean, na.rm = TRUE))
1090s stars object with 3 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s A1     1  180.75  360.5 360.5  540.25  720
1090s dimension(s):
1090s          from to offset delta refsys point    values x/y
1090s geometry    1  6     NA    NA     NA    NA 50,...,55    
1090s x           1 10      0     1 WGS 84 FALSE      NULL [x]
1090s y           1 12     12    -1 WGS 84 FALSE      NULL [y]
1090s > 
1090s > # with "by" geometry not overlapping x
1090s > pt = st_point(c(-10,-10))
1090s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc))))
1090s Geometry set for 5 features 
1090s Geometry type: GEOMETRY
1090s Dimension:     XY
1090s Bounding box:  xmin: -10 ymin: -10 xmax: 10 ymax: 12
1090s Geodetic CRS:  WGS 84
1090s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12))
1090s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12))
1090s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6))
1090s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6))
1090s POINT (-10 -10)
1090s > (a = aggregate(st, sfc, mean))
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max. NA's
1090s A1    28  194.25  360.5 360.5  526.75  693    6
1090s dimension(s):
1090s          from to     offset  delta refsys point
1090s geometry    1  5         NA     NA WGS 84 FALSE
1090s t           1  6 2019-02-20 1 days   Date FALSE
1090s                                                    values
1090s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10)
1090s t                                                    NULL
1090s > (a = aggregate(st, st, mean))
1090s stars object with 2 dimensions and 1 attribute
1090s attribute(s):
1090s     Min. 1st Qu. Median  Mean 3rd Qu. Max.
1090s A1     1  180.75  360.5 360.5  540.25  720
1090s dimension(s):
1090s          from  to     offset  delta refsys point
1090s geometry    1 120         NA     NA WGS 84 FALSE
1090s t           1   6 2019-02-20 1 days   Date FALSE
1090s                                                                 values
1090s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0...
1090s t                                                                 NULL
1090s > 
1090s BEGIN TEST align.R
1090s 
1090s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1090s Copyright (C) 2024 The R Foundation for Statistical Computing
1090s Platform: powerpc64le-unknown-linux-gnu
1090s 
1090s R is free software and comes with ABSOLUTELY NO WARRANTY.
1090s You are welcome to redistribute it under certain conditions.
1090s Type 'license()' or 'licence()' for distribution details.
1090s 
1090s R is a collaborative project with many contributors.
1090s Type 'contributors()' for more information and
1090s 'citation()' on how to cite R or R packages in publications.
1090s 
1090s Type 'demo()' for some demos, 'help()' for on-line help, or
1090s 'help.start()' for an HTML browser interface to help.
1090s Type 'q()' to quit R.
1090s 
1090s > suppressPackageStartupMessages(library(stars))
1091s > set.seed(1331)
1091s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1)
1091s Geometry set for 1 feature 
1091s Geometry type: POINT
1091s Dimension:     XY
1091s Bounding box:  xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430
1091s Projected CRS: SIRGAS 2000 / UTM zone 25S
1091s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335)
1091s POINT (291430.8 9111430)
1091s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs))
1091s > 
1091s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL)
1091s > plot(b, add = TRUE, col = NA, border = 'red')
1091s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE)
1091s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE)
1091s > st_bbox(b)
1091s      xmin      ymin      xmax      ymax 
1091s  297116.8 9119404.1  297786.8 9120074.1 
1091s > bba
1091s      xmin      ymin      xmax      ymax 
1091s  297098.3 9119392.8  297810.8 9120076.8 
1091s > 
1091s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL)
1091s > plot(b, col = 'red', add = TRUE)
1091s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE)
1091s > 
1091s > b0 = st_buffer(b, -100)
1091s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize()
1092s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7))
1092s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL)
1092s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE)
1092s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE)
1092s > plot(b, col = NA, border = 'red', add = TRUE)
1092s > 
1092s > all.equal(bbb, bba)
1092s [1] TRUE
1092s > 
1092s BEGIN TEST area.R
1092s 
1092s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1092s Copyright (C) 2024 The R Foundation for Statistical Computing
1092s Platform: powerpc64le-unknown-linux-gnu
1092s 
1092s R is free software and comes with ABSOLUTELY NO WARRANTY.
1092s You are welcome to redistribute it under certain conditions.
1092s Type 'license()' or 'licence()' for distribution details.
1092s 
1092s R is a collaborative project with many contributors.
1092s Type 'contributors()' for more information and
1092s 'citation()' on how to cite R or R packages in publications.
1092s 
1092s Type 'demo()' for some demos, 'help()' for on-line help, or
1092s 'help.start()' for an HTML browser interface to help.
1092s Type 'q()' to quit R.
1092s 
1092s > suppressPackageStartupMessages(library(stars))
1092s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1092s > x = read_stars(tif)
1093s > (a = st_area(x[,1:5,1:5]))
1093s stars object with 2 dimensions and 1 attribute
1093s attribute(s):
1093s              Min. 1st Qu. Median   Mean 3rd Qu.   Max.
1093s area [m^2] 812.25  812.25 812.25 812.25  812.25 812.25
1093s dimension(s):
1093s   from to  offset delta                     refsys point x/y
1093s x    1  5  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1093s y    1  5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1093s > 
1093s > m = matrix(1:20, nrow = 5, ncol = 4)
1093s > x = c(0, 0.5, 1, 2, 4, 5)  # 6 numbers: boundaries!
1093s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries!
1093s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y)))
1093s stars object with 2 dimensions and 1 attribute
1093s attribute(s):
1093s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1093s m     1    5.75   10.5 10.5   15.25   20
1093s dimension(s):
1093s Missing coordinate reference system: assuming Cartesian coordinates
1093s   from to point                values x/y
1093s x    1  5 FALSE     [0,0.5),...,[4,5) [x]
1093s y    1  4 FALSE [0.3,0.5),...,[2,2.2) [y]
1093s > # image(r, axes = TRUE, col = grey((1:20)/20))
1093s > (a = st_area(r))
1093s stars object with 2 dimensions and 1 attribute
1093s attribute(s):
1093s       Min. 1st Qu. Median  Mean 3rd Qu. Max.
1093s area   0.1     0.2  0.325 0.475     0.5    2
1093s dimension(s):
1093s   from to point                values x/y
1093s x    1  5 FALSE     [0,0.5),...,[4,5) [x]
1093s y    1  4 FALSE [0.3,0.5),...,[2,2.2) [y]
1093s > #plot(a, axes = TRUE)
1093s > 
1093s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata")
1093s > if (s5p != "") {
1093s +  nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column",
1093s + 	curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL)
1093s +  if (inherits(nit.c[[1]], "units"))
1093s + 	nit.c[[1]] = units::drop_units(nit.c[[1]])
1093s +  nit.c[[1]][nit.c[[1]] > 9e+36] = NA
1093s +  st_crs(nit.c) = 4326
1093s +  print((a <- st_area(nit.c[,1:5,1:5])))
1093s +  # plot(a, axes = TRUE, border = NA)
1093s + }
1093s > 
1093s BEGIN TEST crop.R
1093s 
1093s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1093s Copyright (C) 2024 The R Foundation for Statistical Computing
1093s Platform: powerpc64le-unknown-linux-gnu
1093s 
1093s R is free software and comes with ABSOLUTELY NO WARRANTY.
1093s You are welcome to redistribute it under certain conditions.
1093s Type 'license()' or 'licence()' for distribution details.
1093s 
1093s R is a collaborative project with many contributors.
1093s Type 'contributors()' for more information and
1093s 'citation()' on how to cite R or R packages in publications.
1093s 
1093s Type 'demo()' for some demos, 'help()' for on-line help, or
1093s 'help.start()' for an HTML browser interface to help.
1093s Type 'q()' to quit R.
1093s 
1093s > suppressPackageStartupMessages(library(stars))
1094s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1094s > x = read_stars(tif)
1094s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 
1094s + 9111328.49619133)), .Names = c("x", "y"))
1094s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x))
1094s > image(x, axes = TRUE)
1094s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE)
1094s > 
1094s > bb = st_bbox(pts)
1094s > (xx = x[bb])
1094s stars object with 3 dimensions and 1 attribute
1094s attribute(s):
1094s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1094s L7_ETMs.tif     3      56     73 70.87303      89  255
1094s dimension(s):
1094s      from  to  offset delta                     refsys point x/y
1094s x     158 268  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1094s y     245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1094s band    1   6      NA    NA                         NA    NA    
1094s > image(xx)
1094s > plot(st_as_sfc(bb), add = TRUE, col = NA)
1094s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts)))
1094s Sparse geometry binary predicate list of length 1, where the predicate
1094s was `contains'
1094s  1: 1
1094s > 
1094s > image(x)
1094s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085))
1094s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500)
1094s > plot(buf, add = TRUE)
1094s > 
1094s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])),
1094s + 	crs = st_crs(x))
1094s > image(x[buf])
1094s > plot(buf, add = TRUE, col = NA)
1094s > image(x[buf,crop=FALSE])
1095s > plot(buf, add = TRUE, col = NA)
1095s > 
1095s > plot(x, rgb = 1:3)
1095s > 
1095s > # #638:
1095s > l = st_as_stars(L7_ETMs)
1095s > st_bbox(l) |> st_as_sfc() -> bb
1095s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b
1095s > st_crop(l, b)
1096s stars object with 3 dimensions and 1 attribute
1096s attribute(s):
1096s          Min. 1st Qu. Median Mean 3rd Qu. Max.   NA's
1096s L7_ETMs    NA      NA     NA  NaN      NA   NA 737088
1096s dimension(s):
1096s      from  to  offset delta                     refsys point x/y
1096s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1096s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1096s band    1   6      NA    NA                         NA    NA    
1096s > st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix()
1096s Warning message:
1096s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap
1096s       [,1]
1096s [1,] FALSE
1096s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b
1096s > st_crop(l, b)
1097s stars object with 3 dimensions and 1 attribute
1097s attribute(s):
1097s          Min. 1st Qu. Median Mean 3rd Qu. Max.   NA's
1097s L7_ETMs    NA      NA     NA  NaN      NA   NA 737088
1097s dimension(s):
1097s      from  to  offset delta                     refsys point x/y
1097s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1097s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1097s band    1   6      NA    NA                         NA    NA    
1097s > 
1097s Warning message:
1097s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap
1097s BEGIN TEST curvilinear.R
1097s 
1097s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1097s Copyright (C) 2024 The R Foundation for Statistical Computing
1097s Platform: powerpc64le-unknown-linux-gnu
1097s 
1097s R is free software and comes with ABSOLUTELY NO WARRANTY.
1097s You are welcome to redistribute it under certain conditions.
1097s Type 'license()' or 'licence()' for distribution details.
1097s 
1097s R is a collaborative project with many contributors.
1097s Type 'contributors()' for more information and
1097s 'citation()' on how to cite R or R packages in publications.
1097s 
1097s Type 'demo()' for some demos, 'help()' for on-line help, or
1097s 'help.start()' for an HTML browser interface to help.
1097s Type 'q()' to quit R.
1097s 
1097s > suppressPackageStartupMessages(library(stars))
1098s > 
1098s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata")
1098s > if (s5p != "") {
1098s + 
1098s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude")
1098s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude")
1098s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column")
1098s + lat = read_stars(lat_ds)
1098s + lon = read_stars(lon_ds)
1098s + nit = read_stars(nit_ds)
1098s + nit[[1]][nit[[1]] > 9e+36] = NA
1098s + 
1098s + ll = setNames(c(lon, lat), c("x", "y"))
1098s + nit.c0 = st_as_stars(nit, curvilinear = ll)
1098s + 
1098s + # more direct method:
1098s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column",
1098s + 	curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL)
1098s + if (inherits(nit.c[[1]], "units"))
1098s + 	nit.c[[1]] = units::drop_units(nit.c[[1]])
1098s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA
1098s + all.equal(nit.c0, nit.c)
1098s + st_crs(nit.c) = 4326
1098s + print(nit.c)
1098s + 
1098s + if (FALSE && capabilities()["png"]) {
1098s +  png("nit1.png", 800, 800)
1098s +  plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16)
1098s +  maps::map('world', add = TRUE, col = 'red')
1098s +  dev.off()
1098s + 
1098s +  png("nit2.png", 800, 800)
1098s +  plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA)
1098s +  maps::map('world', add = TRUE, col = 'red')
1098s +  dev.off()
1098s + 
1098s +  nit.c = stars:::st_downsample(nit.c, 8)
1098s +  print(nit.c)
1098s +  
1098s +  png("nit3.png", 800, 800)
1098s +  plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16)
1098s +  maps::map('world', add = TRUE, col = 'red')
1098s +  dev.off()
1098s + 
1098s +  png("nit4.png", 800, 800)
1098s +  plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA)
1098s +  maps::map('world', add = TRUE, col = 'red')
1098s +  dev.off()
1098s + }
1098s + 
1098s + }
1098s > 
1098s BEGIN TEST datasets.R
1098s 
1098s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1098s Copyright (C) 2024 The R Foundation for Statistical Computing
1098s Platform: powerpc64le-unknown-linux-gnu
1098s 
1098s R is free software and comes with ABSOLUTELY NO WARRANTY.
1098s You are welcome to redistribute it under certain conditions.
1098s Type 'license()' or 'licence()' for distribution details.
1098s 
1098s R is a collaborative project with many contributors.
1098s Type 'contributors()' for more information and
1098s 'citation()' on how to cite R or R packages in publications.
1098s 
1098s Type 'demo()' for some demos, 'help()' for on-line help, or
1098s 'help.start()' for an HTML browser interface to help.
1098s Type 'q()' to quit R.
1098s 
1098s > suppressPackageStartupMessages(library(stars))
1099s > bcsd_obs
1099s stars_proxy object with 2 attributes in 2 file(s):
1099s $foo
1099s [1] "[...]/bcsd_obs_1999.nc:pr"
1099s 
1099s $bar
1099s [1] "[...]/bcsd_obs_1999.nc:tas"
1099s 
1099s dimension(s):
1099s      from to offset  delta  refsys                    values x/y
1099s x       1 81    -85  0.125      NA                      NULL [x]
1099s y       1 33  37.12 -0.125      NA                      NULL [y]
1099s time    1 12     NA     NA POSIXct 1999-01-31,...,1999-12-31    
1099s > L7_ETMs
1099s stars_proxy object with 1 attribute in 1 file(s):
1099s $L7_ETMs
1099s [1] "[...]/L7_ETMs.tif"
1099s 
1099s dimension(s):
1100s      from  to  offset delta                     refsys point x/y
1100s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1100s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1100s band    1   6      NA    NA                         NA    NA    
1100s > if (require(starsdata, quietly = TRUE)) {
1100s + 	print(stars_sentinel2)
1100s + }
1100s > 
1100s BEGIN TEST dimensions.R
1100s 
1100s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1100s Copyright (C) 2024 The R Foundation for Statistical Computing
1100s Platform: powerpc64le-unknown-linux-gnu
1100s 
1100s R is free software and comes with ABSOLUTELY NO WARRANTY.
1100s You are welcome to redistribute it under certain conditions.
1100s Type 'license()' or 'licence()' for distribution details.
1100s 
1100s R is a collaborative project with many contributors.
1100s Type 'contributors()' for more information and
1100s 'citation()' on how to cite R or R packages in publications.
1100s 
1100s Type 'demo()' for some demos, 'help()' for on-line help, or
1100s 'help.start()' for an HTML browser interface to help.
1100s Type 'q()' to quit R.
1100s 
1100s > # https://github.com/r-spatial/stars/issues/295
1100s > suppressPackageStartupMessages(library(stars))
1100s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars"))
1100s pr, tas, 
1100s > foo <- function(x, idx) stats::lowess(idx, x)$y
1100s > 
1100s > timeline <- st_get_dimension_values(raw, "time")
1100s > smooth = st_apply(raw,
1100s + 	MARGIN = c("x", "y"),
1100s + 	FUN = foo,
1100s + 	idx = st_get_dimension_values(raw, "time")
1100s + )
1100s > 
1100s > st_set_dimensions(smooth,
1100s + 	which = "foo",
1100s + 	values = st_get_dimension_values(raw, "time"),
1100s + 	names = "time"
1100s + )
1100s stars object with 3 dimensions and 2 attributes
1100s attribute(s):
1100s           Min.   1st Qu.   Median     Mean   3rd Qu.     Max. NA's
1100s pr   16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116
1100s tas  -2.354958  9.632157 15.32671 14.61650  19.99331  24.7976 7116
1100s dimension(s):
1100s      from to offset  delta  refsys                    values x/y
1100s time    1 12     NA     NA POSIXct 1999-01-31,...,1999-12-31    
1100s x       1 81    -85  0.125      NA                      NULL [x]
1100s y       1 33  37.12 -0.125      NA                      NULL [y]
1100s > 
1100s > raw %>%
1100s +   st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>%
1100s +   st_set_dimensions("foo", st_dimensions(raw)["time"])
1101s stars object with 3 dimensions and 2 attributes
1101s attribute(s):
1101s           Min.   1st Qu.   Median     Mean   3rd Qu.     Max. NA's
1101s pr   16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116
1101s tas  -2.354958  9.632157 15.32671 14.61650  19.99331  24.7976 7116
1101s dimension(s):
1101s      from to offset  delta  refsys                    values x/y
1101s time    1 12     NA     NA POSIXct 1999-01-31,...,1999-12-31    
1101s x       1 81    -85  0.125      NA                      NULL [x]
1101s y       1 33  37.12 -0.125      NA                      NULL [y]
1101s > 
1101s BEGIN TEST downsample.R
1101s 
1101s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1101s Copyright (C) 2024 The R Foundation for Statistical Computing
1101s Platform: powerpc64le-unknown-linux-gnu
1101s 
1101s R is free software and comes with ABSOLUTELY NO WARRANTY.
1101s You are welcome to redistribute it under certain conditions.
1101s Type 'license()' or 'licence()' for distribution details.
1101s 
1101s R is a collaborative project with many contributors.
1101s Type 'contributors()' for more information and
1101s 'citation()' on how to cite R or R packages in publications.
1101s 
1101s Type 'demo()' for some demos, 'help()' for on-line help, or
1101s 'help.start()' for an HTML browser interface to help.
1101s Type 'q()' to quit R.
1101s 
1101s > suppressPackageStartupMessages(library(stars))
1102s > m = matrix(1:121, 11, 11)
1102s > m
1102s       [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11]
1102s  [1,]    1   12   23   34   45   56   67   78   89   100   111
1102s  [2,]    2   13   24   35   46   57   68   79   90   101   112
1102s  [3,]    3   14   25   36   47   58   69   80   91   102   113
1102s  [4,]    4   15   26   37   48   59   70   81   92   103   114
1102s  [5,]    5   16   27   38   49   60   71   82   93   104   115
1102s  [6,]    6   17   28   39   50   61   72   83   94   105   116
1102s  [7,]    7   18   29   40   51   62   73   84   95   106   117
1102s  [8,]    8   19   30   41   52   63   74   85   96   107   118
1102s  [9,]    9   20   31   42   53   64   75   86   97   108   119
1102s [10,]   10   21   32   43   54   65   76   87   98   109   120
1102s [11,]   11   22   33   44   55   66   77   88   99   110   121
1102s > s = st_as_stars(m)
1102s > st_downsample(s, 1)
1102s stars object with 2 dimensions and 1 attribute
1102s attribute(s):
1102s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1102s A1     1    28.5     61   61    93.5  121
1102s dimension(s):
1102s    from to offset delta point x/y
1102s X1    1  6      0     2 FALSE [x]
1102s X2    1  6      0     2 FALSE [y]
1102s > st_downsample(s, 1)[[1]]
1102s      [,1] [,2] [,3] [,4] [,5] [,6]
1102s [1,]    1   23   45   67   89  111
1102s [2,]    3   25   47   69   91  113
1102s [3,]    5   27   49   71   93  115
1102s [4,]    7   29   51   73   95  117
1102s [5,]    9   31   53   75   97  119
1102s [6,]   11   33   55   77   99  121
1102s > st_downsample(s, 1, offset = 1)
1102s stars object with 2 dimensions and 1 attribute
1102s attribute(s):
1102s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1102s A1    13      37     61   61      85  109
1102s dimension(s):
1102s    from to offset delta point x/y
1102s X1    1  5      1     2 FALSE [x]
1102s X2    1  5      1     2 FALSE [y]
1102s > st_downsample(s, 1, offset = 1)[[1]]
1102s      [,1] [,2] [,3] [,4] [,5]
1102s [1,]   13   35   57   79  101
1102s [2,]   15   37   59   81  103
1102s [3,]   17   39   61   83  105
1102s [4,]   19   41   63   85  107
1102s [5,]   21   43   65   87  109
1102s > st_downsample(s, 1, FUN = mean)
1102s stars object with 2 dimensions and 1 attribute
1102s attribute(s):
1102s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1102s A1     7      31     55   55      79  103
1102s dimension(s):
1102s    from to offset delta point x/y
1102s X1    1  5      0     2 FALSE [x]
1102s X2    1  5      0     2 FALSE [y]
1102s > st_downsample(s, 1, FUN = mean)[[1]]
1102s      [,1] [,2] [,3] [,4] [,5]
1102s [1,]    7   29   51   73   95
1102s [2,]    9   31   53   75   97
1102s [3,]   11   33   55   77   99
1102s [4,]   13   35   57   79  101
1102s [5,]   15   37   59   81  103
1102s > st_downsample(s, 1, offset = 1, FUN = mean)
1102s stars object with 2 dimensions and 1 attribute
1102s attribute(s):
1102s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1102s A1    19      43     67   67      91  115
1102s dimension(s):
1102s    from to offset delta point x/y
1102s X1    1  5      1     2 FALSE [x]
1102s X2    1  5      1     2 FALSE [y]
1102s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]]
1102s      [,1] [,2] [,3] [,4] [,5]
1102s [1,]   18   40   62   84  106
1102s [2,]   20   42   64   86  108
1102s [3,]   22   44   66   88  110
1102s [4,]   24   46   68   90  112
1102s [5,]   26   48   70   92  114
1102s > st_downsample(s, 1, offset = c(0,1))
1102s stars object with 2 dimensions and 1 attribute
1102s attribute(s):
1102s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1102s A1    12    36.5     61   61    85.5  110
1102s dimension(s):
1102s    from to offset delta point x/y
1102s X1    1  6      0     2 FALSE [x]
1102s X2    1  5      1     2 FALSE [y]
1102s > st_downsample(s, 1, offset = c(0,1))[[1]]
1102s      [,1] [,2] [,3] [,4] [,5]
1102s [1,]   12   34   56   78  100
1102s [2,]   14   36   58   80  102
1102s [3,]   16   38   60   82  104
1102s [4,]   18   40   62   84  106
1102s [5,]   20   42   64   86  108
1102s [6,]   22   44   66   88  110
1102s > 
1102s BEGIN TEST ee.R
1102s 
1102s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1102s Copyright (C) 2024 The R Foundation for Statistical Computing
1102s Platform: powerpc64le-unknown-linux-gnu
1102s 
1102s R is free software and comes with ABSOLUTELY NO WARRANTY.
1102s You are welcome to redistribute it under certain conditions.
1102s Type 'license()' or 'licence()' for distribution details.
1102s 
1102s R is a collaborative project with many contributors.
1102s Type 'contributors()' for more information and
1102s 'citation()' on how to cite R or R packages in publications.
1102s 
1102s Type 'demo()' for some demos, 'help()' for on-line help, or
1102s 'help.start()' for an HTML browser interface to help.
1102s Type 'q()' to quit R.
1102s 
1102s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster
1102s > options(digits=15)
1102s > suppressPackageStartupMessages(library(stars))
1103s > L = st_as_stars(L7_ETMs)[,,,1]
1103s > set.seed(123432)
1103s > st_bbox(L) |> 
1103s +   st_as_sfc() |> 
1103s +   st_centroid() |> 
1103s +   st_buffer(50) |>
1103s +   st_sample(10) |> 
1103s +   st_combine() |> 
1103s +   st_convex_hull() -> ch
1103s > if (interactive()) {
1103s +  plot(L, reset = FALSE)
1103s +  plot(ch, add = TRUE, border = 'red', col = NA)
1103s + }
1103s > if (FALSE) {
1103s + e = st_extract(L, ch)[[1]]
1103s + a = aggregate(L, ch, mean)[[1]]
1103s + identical(e, a) # same code path
1103s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]]
1103s + all.equal(e, ee)
1103s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1)
1103s + all.equal(as.vector(ee), aw)
1103s + ee0 = st_extract(L, ch, exact = TRUE)[[1]]
1103s + all.equal(ee0, ee) # ??
1103s + }
1103s > 
1103s BEGIN TEST extract.R
1103s 
1103s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1103s Copyright (C) 2024 The R Foundation for Statistical Computing
1103s Platform: powerpc64le-unknown-linux-gnu
1103s 
1103s R is free software and comes with ABSOLUTELY NO WARRANTY.
1103s You are welcome to redistribute it under certain conditions.
1103s Type 'license()' or 'licence()' for distribution details.
1103s 
1103s R is a collaborative project with many contributors.
1103s Type 'contributors()' for more information and
1103s 'citation()' on how to cite R or R packages in publications.
1103s 
1103s Type 'demo()' for some demos, 'help()' for on-line help, or
1103s 'help.start()' for an HTML browser interface to help.
1103s Type 'q()' to quit R.
1103s 
1103s > # Create 'stars' object
1103s > set.seed(1331)
1103s > suppressPackageStartupMessages(library(stars))
1104s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows
1104s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano))
1104s > (r = st_as_stars(t(volcano)))
1104s stars object with 2 dimensions and 1 attribute
1104s attribute(s):
1104s     Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1104s A1    94     108    124 130.1879     150  195  732
1104s dimension(s):
1104s    from to offset delta point x/y
1104s X1    1 61      0     1 FALSE [x]
1104s X2    1 99      0     1 FALSE [y]
1104s > r = st_set_dimensions(r, 1, offset = 0, delta = 1)
1104s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1)
1104s > 
1104s > # Create points
1104s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100)
1104s > pnt = st_as_sf(pnt)
1104s > 
1104s > # Extract - 'st_join'
1104s > x = st_join(pnt, st_as_sf(r))
1104s > 
1104s > # Extract - 'st_extract'
1104s > y = st_extract(r, pnt)
1104s > 
1104s > # check there are NA's:
1104s > any(is.na(x))
1104s [1] TRUE
1104s > # Compare
1104s > all.equal(x$A1, y[[1]])
1104s [1] TRUE
1104s > 
1104s > ################################################
1104s > if (FALSE) {
1104s + 
1104s + ## tic: segfaults
1104s + # check equal results with stars_proxy:
1104s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt)
1104s + #all.equal(x$A1, y[[1]])
1104s + #all.equal(x, y)
1104s + 
1104s + r = c(r, 2*r, 10*r)
1104s + x = st_join(pnt, st_as_sf(r))
1104s + y = st_as_sf(st_extract(r, pnt))
1104s + all.equal(x, y)
1104s + 
1104s + ## tic: segfaults
1104s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt)
1104s + #all.equal(st_as_sf(x), y)
1104s + 
1104s + tif = system.file("tif/L7_ETMs.tif", package = "stars")
1104s + xp = read_stars(tif, proxy = TRUE)
1104s + xm = read_stars(tif, proxy = FALSE)
1104s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10)
1104s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts)
1104s + em = st_extract(xm, pts)
1104s + if (utils::packageVersion("sf") >= "0.9-7") {
1104s + 	ep = st_extract(xp, pts)
1104s + 	print(all.equal(ep, em, check.attributes = TRUE))
1104s + }
1104s + 
1104s + # two-attribute objects:
1104s + library(stars)
1104s + tif = system.file("tif/L7_ETMs.tif", package = "stars")
1104s + xp = read_stars(c(tif, tif), proxy = TRUE)
1104s + xm = read_stars(c(tif, tif), proxy = FALSE)
1104s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10)
1104s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts)
1104s + em = st_extract(xm, pts)
1104s + if (utils::packageVersion("sf") >= "0.9-7") {
1104s + 	ep = st_extract(xp, pts)
1104s + 	print(all.equal(ep, em, check.attributes = TRUE))
1104s + }
1104s + 
1104s + # single-attribute, single raster objects:
1104s + tif1 = paste0(tempfile(), ".tif")
1104s + write_stars(xm[1,,,1], "x.tif")
1104s + xp = read_stars("x.tif", proxy = TRUE)
1104s + xm = read_stars("x.tif", proxy = FALSE)
1104s + em = st_extract(xm, pts)
1104s + if (utils::packageVersion("sf") >= "0.9-7") {
1104s + 	ep = st_extract(xp, pts)
1104s + 	print(all.equal(ep, em, check.attributes = TRUE))
1104s + }
1104s + 
1104s + # multiple-file attributes:
1104s + x = c(
1104s +   "avhrr-only-v2.19810901.nc",
1104s +   "avhrr-only-v2.19810902.nc",
1104s +   "avhrr-only-v2.19810903.nc",
1104s +   "avhrr-only-v2.19810904.nc",
1104s +   "avhrr-only-v2.19810905.nc",
1104s +   "avhrr-only-v2.19810906.nc",
1104s +   "avhrr-only-v2.19810907.nc",
1104s +   "avhrr-only-v2.19810908.nc",
1104s +   "avhrr-only-v2.19810909.nc"
1104s + )
1104s + file_list = system.file(paste0("netcdf/", x), package = "starsdata")
1104s + if (!identical(file_list, "")) {
1104s +   y = read_stars(file_list, quiet = TRUE)
1104s +   print(y)
1104s +   st_crs(y) = "OGC:CRS84"
1104s +   pts = st_sample(st_as_sfc(st_bbox(y)), 10)
1104s +   em = st_extract(y, pts)
1104s + 
1104s +   (y = read_stars(file_list, quiet = TRUE, proxy = TRUE))
1104s +   print(y)
1104s +   st_crs(y) = "OGC:CRS84"
1104s +   if (utils::packageVersion("sf") >= "0.9-7") {
1104s + 	  ep = st_extract(y, pts)
1104s + 	  print(all.equal(em, ep))
1104s +   }
1104s + }
1104s + 
1104s + # nearest & bilinear comparison:
1104s + if (utils::packageVersion("sf") >= "0.9-7") {
1104s +   set.seed(12331)
1104s +   s = st_as_stars(matrix(rnorm(16), 4))
1104s +   pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular")
1104s +   s1 = st_extract(s, pts, bilinear = FALSE)
1104s +   s2 = st_extract(s, pts, bilinear = TRUE)
1104s +   s1$s2 = s2[[1]]
1104s +   names(s1)[c(1,3)] = c("nearest", "bilinear")
1104s +   print(s1[sample(10000, 5),])
1104s + }
1104s + }
1104s > 
1104s BEGIN TEST gridtypes.R
1104s 
1104s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1104s Copyright (C) 2024 The R Foundation for Statistical Computing
1104s Platform: powerpc64le-unknown-linux-gnu
1104s 
1104s R is free software and comes with ABSOLUTELY NO WARRANTY.
1104s You are welcome to redistribute it under certain conditions.
1104s Type 'license()' or 'licence()' for distribution details.
1104s 
1104s R is a collaborative project with many contributors.
1104s Type 'contributors()' for more information and
1104s 'citation()' on how to cite R or R packages in publications.
1104s 
1104s Type 'demo()' for some demos, 'help()' for on-line help, or
1104s 'help.start()' for an HTML browser interface to help.
1104s Type 'q()' to quit R.
1104s 
1104s > suppressPackageStartupMessages(library(stars))
1105s > 
1105s > # regular, but not spatial:
1105s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar"))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point   values
1105s a       1  3      1     1 FALSE     NULL
1105s b       1  3      1     1 FALSE     NULL
1105s band    1  2     NA    NA FALSE foo, bar
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s   a b band X
1105s 1 1 1  foo 1
1105s 2 2 1  foo 2
1105s 3 3 1  foo 3
1105s 4 1 2  foo 4
1105s > try(x <- st_bbox(st)) # error
1105s > 
1105s > # regular, geotransform:
1105s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point   values x/y
1105s x       1  3      1     1 FALSE     NULL [x]
1105s y       1  3      1     1 FALSE     NULL [y]
1105s band    1  2     NA    NA FALSE foo, bar    
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s     x   y band X
1105s 1 1.5 1.5  foo 1
1105s 2 2.5 1.5  foo 2
1105s 3 3.5 1.5  foo 3
1105s 4 1.5 2.5  foo 4
1105s > as.data.frame(st, add_max=TRUE)[1:4,]
1105s   x y band x_max y_max X
1105s 1 1 1  foo     2     2 1
1105s 2 2 1  foo     3     2 2
1105s 3 3 1  foo     4     2 3
1105s 4 1 2  foo     2     3 4
1105s > st_bbox(st)
1105s Error in st_bbox.dimensions(st_dimensions(obj), ...) : 
1105s   dimensions table does not have x & y, nor an sfc dimension
1105s xmin ymin xmax ymax 
1105s    1    1    4    4 
1105s > 
1105s > # rectilinear with offset given:
1105s > xd = c(1, 2, 4)
1105s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point              values x/y
1105s x       1  3     NA    NA FALSE [1,2), [2,4), [4,6) [x]
1105s y       1  3      1     1 FALSE                NULL [y]
1105s band    1  2     NA    NA FALSE            foo, bar    
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s     x   y band X
1105s 1 1.5 1.5  foo 1
1105s 2 3.0 1.5  foo 2
1105s 3 5.0 1.5  foo 3
1105s 4 1.5 2.5  foo 4
1105s > as.data.frame(st, add_max=TRUE)[1:4,]
1105s   x y band x_max y_max X
1105s 1 1 1  foo     2     2 1
1105s 2 2 1  foo     4     2 2
1105s 3 4 1  foo     6     2 3
1105s 4 1 2  foo     2     3 4
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s    1    1    6    4 
1105s > 
1105s > # rectilinear with midpoints given:
1105s > xd = c(1, 2, 4)
1105s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE)
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point                          values x/y
1105s x       1  3     NA    NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x]
1105s y       1  3    0.5     1 FALSE                            NULL [y]
1105s band    1  2     NA    NA FALSE                        foo, bar    
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s      x y band X
1105s 1 1.00 1  foo 1
1105s 2 2.25 1  foo 2
1105s 3 4.00 1  foo 3
1105s 4 1.00 2  foo 4
1105s > as.data.frame(st, add_max=TRUE)[1:4,]
1105s     x   y band x_max y_max X
1105s 1 0.5 0.5  foo   1.5   1.5 1
1105s 2 1.5 0.5  foo   3.0   1.5 2
1105s 3 3.0 0.5  foo   5.0   1.5 3
1105s 4 0.5 1.5  foo   1.5   2.5 4
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s  0.5  0.5  5.0  3.5 
1105s > 
1105s > # rectilinear with midpoints given, point support
1105s > xd = c(1, 2, 4)
1105s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE)
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point   values x/y
1105s x       1  3     NA    NA  TRUE  1, 2, 4 [x]
1105s y       1  3    0.5     1  TRUE     NULL [y]
1105s band    1  2     NA    NA  TRUE foo, bar    
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s   x y band X
1105s 1 1 1  foo 1
1105s 2 2 1  foo 2
1105s 3 4 1  foo 3
1105s 4 1 2  foo 4
1105s > as.data.frame(st, add_max=TRUE)[1:4,]
1105s   x   y band x_max y_max X
1105s 1 1 0.5  foo     1   1.5 1
1105s 2 2 0.5  foo     2   1.5 2
1105s 3 4 0.5  foo     4   1.5 3
1105s 4 1 1.5  foo     1   2.5 4
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s  1.0  0.5  4.0  3.5 
1105s > 
1105s > # rectilinear with start/end given:
1105s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8))
1105s > xd = c(1, 2, 4, 8) # one more than dim of the data array
1105s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point              values x/y
1105s x       1  3     NA    NA FALSE [1,2), [2,4), [4,8) [x]
1105s y       1  3      1     1 FALSE                NULL [y]
1105s band    1  2     NA    NA FALSE            foo, bar    
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s     x   y band X
1105s 1 1.5 1.5  foo 1
1105s 2 3.0 1.5  foo 2
1105s 3 6.0 1.5  foo 3
1105s 4 1.5 2.5  foo 4
1105s > as.data.frame(st, add_max=TRUE)[1:4,]
1105s   x y band x_max y_max X
1105s 1 1 1  foo     2     2 1
1105s 2 2 1  foo     4     2 2
1105s 3 4 1  foo     8     2 3
1105s 4 1 2  foo     2     3 4
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s    1    1    8    4 
1105s > 
1105s > # with sfc:
1105s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3))
1105s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar"))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point                      values
1105s x       1  3     NA    NA  TRUE POINT (0 1),...,POINT (4 3)
1105s y       1  3      1     1 FALSE                        NULL
1105s band    1  2     NA    NA FALSE                    foo, bar
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s             x y band X
1105s 1 POINT (0 1) 1  foo 1
1105s 2 POINT (2 1) 1  foo 2
1105s 3 POINT (4 3) 1  foo 3
1105s 4 POINT (0 1) 2  foo 4
1105s > st_as_sf(st, long = TRUE)[1:4,]
1105s Simple feature collection with 4 features and 3 fields
1105s Geometry type: POINT
1105s Dimension:     XY
1105s Bounding box:  xmin: 0 ymin: 1 xmax: 4 ymax: 3
1105s CRS:           NA
1105s   y band X           x
1105s 1 1  foo 1 POINT (0 1)
1105s 2 1  foo 2 POINT (2 1)
1105s 3 1  foo 3 POINT (4 3)
1105s 4 2  foo 4 POINT (0 1)
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s    0    1    4    3 
1105s > 
1105s > # rotated/sheared:
1105s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2))
1105s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d))
1105s stars object with 3 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1    5.25    9.5  9.5   13.75   18
1105s dimension(s):
1105s      from to offset delta point   values x/y
1105s x       1  3      1     1 FALSE     NULL [x]
1105s y       1  3      1     1 FALSE     NULL [y]
1105s band    1  2     NA    NA FALSE foo, bar    
1105s sheared raster with parameters: 0.2 -0.2 
1105s > as.data.frame(st, add_max=FALSE)[1:4,]
1105s     x   y X
1105s 1 1.6 1.4 1
1105s 2 2.6 1.2 2
1105s 3 3.6 1.0 3
1105s 4 1.8 2.4 4
1105s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors
1105s > st_bbox(st)
1105s xmin ymin xmax ymax 
1105s  1.0  0.4  4.6  4.0 
1105s > 
1105s > # curvilinear:
1105s > set.seed(13531)
1105s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3))
1105s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3))
1105s > ll = setNames(c(lon, lat), c("lon", "lat"))
1105s > d = st_dimensions(lon = 1:3, lat = 1:3)
1105s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d)
1105s > (st = st_as_stars(a, curvilinear = ll))
1105s stars object with 2 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s X     1       3      5    5       7    9
1105s dimension(s):
1105s Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 
1105s   add_max will not work for rotated/shared rasters
1105s     from to         refsys point               values x/y
1105s lon    1  3 WGS 84 (CRS84) FALSE  [3x3] 0.03,...,0.89 [x]
1105s lat    1  3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y]
1105s curvilinear grid
1105s > as.data.frame(st)
1105s    lon   lat X
1105s 1 0.89 0.250 1
1105s 2 0.64 0.510 2
1105s 3 0.30 0.670 3
1105s 4 0.69 0.890 4
1105s 5 0.47 0.890 5
1105s 6 0.26 0.190 6
1105s 7 0.57 0.021 7
1105s 8 0.27 0.220 8
1105s 9 0.03 0.340 9
1105s > st_bbox(st)
1105s  xmin  ymin  xmax  ymax 
1105s 0.030 0.021 0.890 0.890 
1105s > 
1105s > # time regular:
1105s > t = as.Date("2019-01-20") + 0:3
1105s > d = st_dimensions(t, sfc)
1105s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d))
1105s stars object with 2 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s a     1    3.75    6.5  6.5    9.25   12
1105s dimension(s):
1105s    from to     offset  delta refsys point                      values
1105s X1    1  4 2019-01-20 1 days   Date FALSE                        NULL
1105s X2    1  3         NA     NA     NA  TRUE POINT (0 1),...,POINT (4 3)
1105s > as.data.frame(st)
1105s            X1          X2  a
1105s 1  2019-01-20 POINT (0 1)  1
1105s 2  2019-01-21 POINT (0 1)  2
1105s 3  2019-01-22 POINT (0 1)  3
1105s 4  2019-01-23 POINT (0 1)  4
1105s 5  2019-01-20 POINT (2 1)  5
1105s 6  2019-01-21 POINT (2 1)  6
1105s 7  2019-01-22 POINT (2 1)  7
1105s 8  2019-01-23 POINT (2 1)  8
1105s 9  2019-01-20 POINT (4 3)  9
1105s 10 2019-01-21 POINT (4 3) 10
1105s 11 2019-01-22 POINT (4 3) 11
1105s 12 2019-01-23 POINT (4 3) 12
1105s > 
1105s > # time, rectilinear
1105s > t = as.Date("2019-01-20") + c(0, 2, 3, 10)
1105s > d = st_dimensions(t, sfc)
1105s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d))
1105s stars object with 2 dimensions and 1 attribute
1105s attribute(s):
1105s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1105s a     1    3.75    6.5  6.5    9.25   12
1105s dimension(s):
1105s    from to refsys point                      values
1105s X1    1  4   Date FALSE   2019-01-20,...,2019-01-30
1105s X2    1  3     NA  TRUE POINT (0 1),...,POINT (4 3)
1105s > as.data.frame(st)
1105s            X1          X2  a
1105s 1  2019-01-20 POINT (0 1)  1
1105s 2  2019-01-22 POINT (0 1)  2
1105s 3  2019-01-23 POINT (0 1)  3
1105s 4  2019-01-30 POINT (0 1)  4
1105s 5  2019-01-20 POINT (2 1)  5
1105s 6  2019-01-22 POINT (2 1)  6
1105s 7  2019-01-23 POINT (2 1)  7
1105s 8  2019-01-30 POINT (2 1)  8
1105s 9  2019-01-20 POINT (4 3)  9
1105s 10 2019-01-22 POINT (4 3) 10
1105s 11 2019-01-23 POINT (4 3) 11
1105s 12 2019-01-30 POINT (4 3) 12
1105s > 
1105s BEGIN TEST mdim.R
1105s 
1105s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1105s Copyright (C) 2024 The R Foundation for Statistical Computing
1105s Platform: powerpc64le-unknown-linux-gnu
1105s 
1105s R is free software and comes with ABSOLUTELY NO WARRANTY.
1105s You are welcome to redistribute it under certain conditions.
1105s Type 'license()' or 'licence()' for distribution details.
1105s 
1105s R is a collaborative project with many contributors.
1105s Type 'contributors()' for more information and
1105s 'citation()' on how to cite R or R packages in publications.
1105s 
1105s Type 'demo()' for some demos, 'help()' for on-line help, or
1105s 'help.start()' for an HTML browser interface to help.
1105s Type 'q()' to quit R.
1105s 
1105s > Sys.setenv(TZ="")
1105s > suppressPackageStartupMessages(library(stars))
1106s > matrix(1:4,2)
1106s      [,1] [,2]
1106s [1,]    1    3
1106s [2,]    2    4
1106s > m = matrix(1:4,2)
1106s > s = st_as_stars(m)
1106s > 
1106s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 
1106s > sfc = st_sfc(st_point(0:1), st_point(3:2))
1106s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326)
1106s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600)
1106s > s = st_set_dimensions(s, 2, tm)
1106s > f = tempfile(fileext = ".nc")
1106s > write_mdim(s, f, as_float = FALSE)
1106s > s2 = read_mdim(f)
1106s Warning messages:
1106s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options,  :
1106s   GDAL Error 6: SetIndexingVariable() not implemented
1106s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options,  :
1106s   GDAL Error 6: SetIndexingVariable() not implemented
1106s > #print(s2)
1106s > print(all.equal(s, s2, check.attributes = FALSE))
1106s [1] TRUE
1106s > print(all.equal(s, s2))
1106s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >"                                   
1106s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >"                                     
1106s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >"
1106s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >"  
1106s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >"                       
1106s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >"                          
1106s > 
1106s > st_crs(sfc) = st_crs(s2)
1106s > st_crs(s) = st_crs(s2)
1106s > tm = as.Date("2023-02-25") + 0:1
1106s > sd = st_set_dimensions(s, 2, tm)
1106s > print(sd)
1106s stars object with 2 dimensions and 1 attribute
1106s attribute(s):
1106s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1106s A1     1    1.75    2.5  2.5    3.25    4
1106s dimension(s):
1106s    from to     offset  delta refsys point                   values
1106s X1    1  2         NA     NA WGS 84  TRUE POINT (0 1), POINT (3 2)
1106s X2    1  2 2023-02-25 1 days   Date FALSE                     NULL
1106s > sd = st_set_dimensions(sd, 1, sfc)
1106s > print(sd)
1106s stars object with 2 dimensions and 1 attribute
1106s attribute(s):
1106s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1106s A1     1    1.75    2.5  2.5    3.25    4
1106s dimension(s):
1106s    from to     offset  delta refsys point                   values
1106s X1    1  2         NA     NA WGS 84  TRUE POINT (0 1), POINT (3 2)
1106s X2    1  2 2023-02-25 1 days   Date FALSE                     NULL
1106s > f = tempfile(fileext = ".nc")
1106s > write_mdim(sd, f)
1106s Warning messages:
1106s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options,  :
1106s   GDAL Error 6: SetIndexingVariable() not implemented
1106s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options,  :
1106s   GDAL Error 6: SetIndexingVariable() not implemented
1106s > sd2 = read_mdim(f)
1106s > print(sd2)
1106s stars object with 2 dimensions and 1 attribute
1106s attribute(s):
1106s     Min. 1st Qu. Median Mean 3rd Qu. Max.
1106s A1     1    1.75    2.5  2.5    3.25    4
1106s dimension(s):
1106s    from to     offset  delta refsys point                   values
1106s X1    1  2         NA     NA WGS 84  TRUE POINT (0 1), POINT (3 2)
1106s X2    1  2 2023-02-25 1 days   Date    NA                     NULL
1106s > print(all.equal(sd, sd2, check.attributes = FALSE))
1106s [1] TRUE
1106s > print(all.equal(sd, sd2))
1106s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >"
1106s > # if (.Platform$OS.type == "unix") {
1106s > #   print(read_mdim(paste0("/vsizip/", (system.file("zarr/sic_daily_sample.zarr.zip", package = "stars"))))
1106s > # }
1106s > 
1106s BEGIN TEST nc.R
1106s 
1106s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1106s Copyright (C) 2024 The R Foundation for Statistical Computing
1106s Platform: powerpc64le-unknown-linux-gnu
1106s 
1106s R is free software and comes with ABSOLUTELY NO WARRANTY.
1106s You are welcome to redistribute it under certain conditions.
1106s Type 'license()' or 'licence()' for distribution details.
1106s 
1106s R is a collaborative project with many contributors.
1106s Type 'contributors()' for more information and
1106s 'citation()' on how to cite R or R packages in publications.
1106s 
1106s Type 'demo()' for some demos, 'help()' for on-line help, or
1106s 'help.start()' for an HTML browser interface to help.
1106s Type 'q()' to quit R.
1106s 
1106s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R
1106s > suppressPackageStartupMessages(library(sf))
1106s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf"))
1107s > m = st_set_geometry(nc, NULL)
1107s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")])
1107s > dim(n) = c(county = 100, var = 3, year = 2)
1107s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979))
1107s > suppressPackageStartupMessages(library(stars))
1107s > (st = st_as_stars(pop = n))
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s pop     0       8    538 1657.032    1784 30757
1107s dimension(s):
1107s        from  to              values
1107s county    1 100  Ashe,...,Brunswick
1107s var       1   3 BIR  , SID  , NWBIR
1107s year      1   2          1974, 1979
1107s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979))
1107s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year"))
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s pop     0       8    538 1657.032    1784 30757
1107s dimension(s):
1107s            from  to refsys point
1107s geometries    1 100  NAD27 FALSE
1107s var           1   3     NA    NA
1107s year          1   2     NA    NA
1107s                                                                   values
1107s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s var                                                  BIR  , SID  , NWBIR
1107s year                                                          1974, 1979
1107s > foo
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s pop     0       8    538 1657.032    1784 30757
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s var       1   3     NA    NA
1107s year      1   2     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s var                                              BIR  , SID  , NWBIR
1107s year                                                      1974, 1979
1107s > st_bbox(foo)
1107s      xmin      ymin      xmax      ymax 
1107s -84.32385  33.88199 -75.45698  36.58965 
1107s > (x = st_as_sf(foo))
1107s Simple feature collection with 100 features and 6 fields
1107s Geometry type: MULTIPOLYGON
1107s Dimension:     XY
1107s Bounding box:  xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965
1107s Geodetic CRS:  NAD27
1107s First 10 features:
1107s    BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979
1107s 1      1091        1         10     1364        0         19
1107s 2       487        0         10      542        3         12
1107s 3      3188        5        208     3616        6        260
1107s 4       508        1        123      830        2        145
1107s 5      1421        9       1066     1606        3       1197
1107s 6      1452        7        954     1838        5       1237
1107s 7       286        0        115      350        2        139
1107s 8       420        0        254      594        2        371
1107s 9       968        4        748     1190        2        844
1107s 10     1612        1        160     2038        5        176
1107s                            county
1107s 1  MULTIPOLYGON (((-81.47276 3...
1107s 2  MULTIPOLYGON (((-81.23989 3...
1107s 3  MULTIPOLYGON (((-80.45634 3...
1107s 4  MULTIPOLYGON (((-76.00897 3...
1107s 5  MULTIPOLYGON (((-77.21767 3...
1107s 6  MULTIPOLYGON (((-76.74506 3...
1107s 7  MULTIPOLYGON (((-76.00897 3...
1107s 8  MULTIPOLYGON (((-76.56251 3...
1107s 9  MULTIPOLYGON (((-78.30876 3...
1107s 10 MULTIPOLYGON (((-80.02567 3...
1107s > frac = function(x) x[2] / x[1]
1107s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1])
1107s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1])
1107s > st_apply(foo, c(1,3), frac)
1107s stars object with 2 dimensions and 1 attribute
1107s attribute(s):
1107s       Min.     1st Qu.      Median        Mean     3rd Qu.       Max.
1107s frac     0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s year      1   2     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s year                                                      1974, 1979
1107s > st_apply(foo, c(1,3), frac2)
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min.     1st Qu.      Median      Mean   3rd Qu.      Max.
1107s pop     0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273
1107s dimension(s):
1107s        from  to refsys point
1107s frac2     1   2     NA    NA
1107s county    1 100  NAD27 FALSE
1107s year      1   2     NA    NA
1107s                                                               values
1107s frac2                                                   sidsr, nwbr 
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s year                                                      1974, 1979
1107s > st_apply(foo, c(1,3), frac2an)
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min.     1st Qu.      Median      Mean   3rd Qu.      Max.
1107s pop     0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273
1107s dimension(s):
1107s         from  to refsys point
1107s frac2an    1   2     NA    NA
1107s county     1 100  NAD27 FALSE
1107s year       1   2     NA    NA
1107s                                                                values
1107s frac2an                                                          NULL
1107s county  MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s year                                                       1974, 1979
1107s > library(abind)
1107s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1)))
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min.     1st Qu.      Median      Mean   3rd Qu.      Max.
1107s pop     0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s year      1   2     NA    NA
1107s frac2     1   2     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s year                                                      1974, 1979
1107s frac2                                                   sidsr, nwbr 
1107s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2"))
1107s > all.equal(st_dimensions(x), st_dimensions(y))
1107s [1] TRUE
1107s > 
1107s > split(foo, 2)
1107s stars object with 2 dimensions and 3 attributes
1107s attribute(s):
1107s        Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s BIR     248 1176.75   2265 3761.770 4450.75 30757
1107s SID       0    2.00      5    7.515    9.00    57
1107s NWBIR     1  206.00    742 1201.810 1315.75 11631
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s year      1   2     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s year                                                      1974, 1979
1107s > split(foo, 3)
1107s stars object with 2 dimensions and 2 attributes
1107s attribute(s):
1107s       Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s 1974     0       8  501.5 1452.367 1580.50 21588
1107s 1979     0       9  614.0 1861.697 2040.25 30757
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s var       1   3     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s var                                              BIR  , SID  , NWBIR
1107s > 
1107s > st_crs(foo)
1107s Coordinate Reference System:
1107s   User input: NAD27 
1107s   wkt:
1107s GEOGCRS["NAD27",
1107s     DATUM["North American Datum 1927",
1107s         ELLIPSOID["Clarke 1866",6378206.4,294.978698213898,
1107s             LENGTHUNIT["metre",1]]],
1107s     PRIMEM["Greenwich",0,
1107s         ANGLEUNIT["degree",0.0174532925199433]],
1107s     CS[ellipsoidal,2],
1107s         AXIS["geodetic latitude (Lat)",north,
1107s             ORDER[1],
1107s             ANGLEUNIT["degree",0.0174532925199433]],
1107s         AXIS["geodetic longitude (Lon)",east,
1107s             ORDER[2],
1107s             ANGLEUNIT["degree",0.0174532925199433]],
1107s     USAGE[
1107s         SCOPE["Geodesy."],
1107s         AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."],
1107s         BBOX[7.15,167.65,83.17,-47.74]],
1107s     ID["EPSG",4267]]
1107s > plot(foo)
1107s > 
1107s > # subset vector cube:
1107s > foo[nc[1]]
1107s stars object with 3 dimensions and 1 attribute
1107s attribute(s):
1107s      Min. 1st Qu. Median     Mean 3rd Qu.  Max.
1107s pop     0       8    538 1657.032    1784 30757
1107s dimension(s):
1107s        from  to refsys point
1107s county    1 100  NAD27 FALSE
1107s var       1   3     NA    NA
1107s year      1   2     NA    NA
1107s                                                               values
1107s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572...
1107s var                                              BIR  , SID  , NWBIR
1107s year                                                      1974, 1979
1107s > 
1107s BEGIN TEST plot.R
1108s 
1108s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1108s Copyright (C) 2024 The R Foundation for Statistical Computing
1108s Platform: powerpc64le-unknown-linux-gnu
1108s 
1108s R is free software and comes with ABSOLUTELY NO WARRANTY.
1108s You are welcome to redistribute it under certain conditions.
1108s Type 'license()' or 'licence()' for distribution details.
1108s 
1108s R is a collaborative project with many contributors.
1108s Type 'contributors()' for more information and
1108s 'citation()' on how to cite R or R packages in publications.
1108s 
1108s Type 'demo()' for some demos, 'help()' for on-line help, or
1108s 'help.start()' for an HTML browser interface to help.
1108s Type 'q()' to quit R.
1108s 
1108s > suppressPackageStartupMessages(library(stars))
1108s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) {
1108s +  data(air) # this loads several datasets in .GlobalEnv
1108s +  dim(air)
1108s +  d = st_dimensions(station = st_as_sfc(stations), time = dates)
1108s +  aq = st_as_stars(list(PM10 = air), dimensions = d)
1108s +  image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series")
1108s +  st_geometry(aq)
1108s + }
1109s Geometry set for 70 features 
1109s Geometry type: POINT
1109s Dimension:     XY
1109s Bounding box:  xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497
1109s Geodetic CRS:  +proj=longlat +datum=WGS84 +no_defs
1109s First 5 geometries:
1109s > 
1109s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata")
1109s > if (csv != "") {
1109s + 	rgb = read.csv(csv, header = TRUE, sep = ";")
1109s + 	luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata"))
1109s + 	plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL)
1109s + }
1109s > 
1109s > # https://github.com/r-spatial/stars/issues/233 :
1109s > nc = read_sf(system.file("shape/nc.shp", package = "sf"))
1109s POINT (9.585911 53.67057)
1109s POINT (9.68503 53.52418)
1109s POINT (9.791584 54.07312)
1109s POINT (13.64701 52.44775)
1109s POINT (13.29635 52.65315)
1110s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1)
1110s > plot(output)
1110s > 
1110s Warning message:
1110s In plot.stars(output) :
1110s   breaks="quantile" leads to a single class; maybe try breaks="equal" instead?
1110s BEGIN TEST predict.R
1110s 
1110s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1110s Copyright (C) 2024 The R Foundation for Statistical Computing
1110s Platform: powerpc64le-unknown-linux-gnu
1110s 
1110s R is free software and comes with ABSOLUTELY NO WARRANTY.
1110s You are welcome to redistribute it under certain conditions.
1110s Type 'license()' or 'licence()' for distribution details.
1110s 
1110s R is a collaborative project with many contributors.
1110s Type 'contributors()' for more information and
1110s 'citation()' on how to cite R or R packages in publications.
1110s 
1110s Type 'demo()' for some demos, 'help()' for on-line help, or
1110s 'help.start()' for an HTML browser interface to help.
1110s Type 'q()' to quit R.
1110s 
1110s > suppressPackageStartupMessages(library(stars))
1111s > # predict:
1111s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1111s > (x = read_stars(tif))
1111s stars object with 3 dimensions and 1 attribute
1111s attribute(s):
1111s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1111s L7_ETMs.tif     1      54     69 68.91242      86  255
1111s dimension(s):
1111s      from  to  offset delta                     refsys point x/y
1111s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1111s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1111s band    1   6      NA    NA                         NA    NA    
1111s > st_crs(x) = st_crs(x) # cleans trailing space
1111s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50))
1111s > x = predict(x, model)
1112s > 
1112s > (y = read_stars(tif, proxy = TRUE))
1112s stars_proxy object with 1 attribute in 1 file(s):
1112s $L7_ETMs.tif
1112s [1] "[...]/L7_ETMs.tif"
1112s 
1112s dimension(s):
1112s      from  to  offset delta                     refsys point x/y
1112s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1112s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1112s band    1   6      NA    NA                         NA    NA    
1112s > (yp = predict(y, model))
1112s stars_proxy object with 1 attribute in 1 file(s):
1112s $L7_ETMs.tif
1112s [1] "[...]/L7_ETMs.tif"
1112s 
1112s dimension(s):
1112s      from  to  offset delta                     refsys point x/y
1112s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1112s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1112s band    1   6      NA    NA                         NA    NA    
1112s call_list:
1112s [[1]]
1112s predict(object = object, model = model)
1112s attr(,".Environment")
1112s <environment: 0x14a1aeb07638>
1112s 
1112s This object has pending lazy operations: dimensions as printed may not reflect this.
1112s > all.equal(x, st_as_stars(yp))
1113s [1] TRUE
1113s > 
1113s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6))
1113s > (y_spl = split(yy, 3))
1113s stars_proxy object with 1 attribute in 1 file(s):
1113s $L7_ETMs.tif
1113s [1] "[...]/L7_ETMs.tif"
1113s 
1113s dimension(s):
1113s      from  to  offset delta                     refsys point          values
1113s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL
1113s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL
1113s band    1   6      NA    NA                         NA    NA band1,...,band6
1113s      x/y
1113s x    [x]
1113s y    [y]
1113s band    
1113s call_list:
1113s [[1]]
1113s split(x = x, 3)
1113s attr(,".Environment")
1113s <environment: 0x14a1af6f6470>
1113s 
1113s This object has pending lazy operations: dimensions as printed may not reflect this.
1113s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,]
1113s          x       y band1 band2 band3 band4 band5 band6
1113s 1 288790.5 9120747    69    56    46    79    86    46
1113s 2 288819.0 9120747    69    57    49    75    88    49
1113s 3 288847.5 9120747    63    52    45    66    75    41
1113s > 
1113s BEGIN TEST proxy.R
1113s 
1113s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1113s Copyright (C) 2024 The R Foundation for Statistical Computing
1113s Platform: powerpc64le-unknown-linux-gnu
1113s 
1113s R is free software and comes with ABSOLUTELY NO WARRANTY.
1113s You are welcome to redistribute it under certain conditions.
1113s Type 'license()' or 'licence()' for distribution details.
1113s 
1113s R is a collaborative project with many contributors.
1113s Type 'contributors()' for more information and
1113s 'citation()' on how to cite R or R packages in publications.
1113s 
1113s Type 'demo()' for some demos, 'help()' for on-line help, or
1113s 'help.start()' for an HTML browser interface to help.
1113s Type 'q()' to quit R.
1113s 
1113s > Sys.setenv(TZ="UTC")
1113s > suppressPackageStartupMessages(library(sf))
1113s > suppressPackageStartupMessages(library(stars))
1114s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1114s > (r = read_stars(tif, proxy = TRUE))
1114s stars_proxy object with 1 attribute in 1 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s > if (interactive()) {
1114s + 	plot(r)
1114s + }
1114s > dim(r)
1114s    x    y band 
1114s  349  352    6 
1114s > r[,,,2:3]
1114s stars_proxy object with 1 attribute in 1 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    2   3      NA    NA                         NA    NA    
1114s > r+r
1114s stars_proxy object with 1 attribute in 1 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s call_list:
1114s [[1]]
1114s e1 + e2
1114s attr(,".Environment")
1114s <environment: 0x14b86f705d18>
1114s 
1114s This object has pending lazy operations: dimensions as printed may not reflect this.
1114s > st_as_stars(sin(r), downsample = 2)
1114s stars object with 3 dimensions and 1 attribute
1114s attribute(s):
1114s                    Min.   1st Qu.    Median       Mean   3rd Qu.      Max.
1114s L7_ETMs.tif  -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119
1114s dimension(s):
1114s      from  to  offset  delta                     refsys point x/y
1114s x       1 117  288776  85.01 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA     NA                         NA    NA    
1114s > aperm(r, c(3,2,1))
1114s stars_proxy object with 1 attribute in 1 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s call_list:
1114s [[1]]
1114s aperm(a = a, perm = perm)
1114s attr(,".Environment")
1114s <environment: 0x14b86cd99d38>
1114s 
1114s This object has pending lazy operations: dimensions as printed may not reflect this.
1114s > if (interactive()) {
1114s + 	plot(r)
1114s + }
1114s > (xx = c(r,r))
1114s stars_proxy object with 2 attributes in 2 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s > st_redimension(xx)
1114s stars_proxy object with 1 attribute in 2 file(s):
1114s $L7_ETMs.tif.L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s         from  to  offset delta                     refsys point
1114s x          1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE
1114s y          1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE
1114s band       1   6      NA    NA                         NA    NA
1114s new_dim    1   2      NA    NA                         NA    NA
1114s                           values x/y
1114s x                           NULL [x]
1114s y                           NULL [y]
1114s band                        NULL    
1114s new_dim L7_ETMs.tif, L7_ETMs.tif    
1114s > st_as_stars(r)
1114s stars object with 3 dimensions and 1 attribute
1114s attribute(s):
1114s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1114s L7_ETMs.tif     1      54     69 68.91242      86  255
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s > (y = st_apply(r, 1:2, max))
1114s stars_proxy object with 1 attribute in 1 file(s):
1114s $L7_ETMs.tif
1114s [1] "[...]/L7_ETMs.tif"
1114s 
1114s dimension(s):
1114s      from  to  offset delta                     refsys point x/y
1114s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1114s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1114s band    1   6      NA    NA                         NA    NA    
1114s call_list:
1114s [[1]]
1114s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 
1114s     PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname)
1114s attr(,".Environment")
1114s <environment: 0x14b86d5e6728>
1114s 
1114s This object has pending lazy operations: dimensions as printed may not reflect this.
1114s > (yy = st_as_stars(y, downsample = 1))
1114s stars object with 2 dimensions and 1 attribute
1114s attribute(s):
1114s      Min. 1st Qu. Median     Mean 3rd Qu. Max.
1114s max    55      85     96 99.38568     113  255
1114s dimension(s):
1115s   from  to  offset delta                     refsys point x/y
1115s x    1 175  288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y    1 176 9120761   -57 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s > (y = adrop(st_apply(r, c("x", "y"), max)))
1115s stars_proxy object with 1 attribute in 1 file(s):
1115s $L7_ETMs.tif
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s dimension(s):
1115s      from  to  offset delta                     refsys point x/y
1115s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s band    1   6      NA    NA                         NA    NA    
1115s call_list:
1115s [[1]]
1115s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 
1115s     PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname)
1115s attr(,".Environment")
1115s <environment: 0x14b86f135048>
1115s 
1115s [[2]]
1115s adrop(x = x, drop = drop)
1115s attr(,".Environment")
1115s <environment: 0x14b86f13f0f0>
1115s 
1115s This object has pending lazy operations: dimensions as printed may not reflect this.
1115s > (yy = st_as_stars(y, downsample = 1))
1115s stars object with 2 dimensions and 1 attribute
1115s attribute(s):
1115s      Min. 1st Qu. Median     Mean 3rd Qu. Max.
1115s max    55      85     96 99.38568     113  255
1115s dimension(s):
1115s   from  to  offset delta                     refsys point x/y
1115s x    1 175  288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y    1 176 9120761   -57 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s > plot(yy)
1115s > (y = adrop(st_apply(r, c("x", "band"), max)))
1115s stars_proxy object with 1 attribute in 1 file(s):
1115s $L7_ETMs.tif
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s dimension(s):
1115s      from  to  offset delta                     refsys point x/y
1115s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s band    1   6      NA    NA                         NA    NA    
1115s call_list:
1115s [[1]]
1115s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 
1115s     PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname)
1115s attr(,".Environment")
1115s <environment: 0x14b86d4babf8>
1115s 
1115s [[2]]
1115s adrop(x = x, drop = drop)
1115s attr(,".Environment")
1115s <environment: 0x14b86d4ae310>
1115s 
1115s This object has pending lazy operations: dimensions as printed may not reflect this.
1115s > (yy = st_as_stars(y, downsample = 1))
1115s stars object with 2 dimensions and 1 attribute
1115s attribute(s):
1115s      Min. 1st Qu. Median     Mean 3rd Qu. Max.
1115s max    77     111    133 137.8505     157  255
1115s dimension(s):
1115s      from  to offset delta                     refsys point
1115s x       1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE
1115s band    1   6     NA    NA                         NA    NA
1115s Warning message:
1115s In FUN(X[[i]], ...) :
1115s   st_apply on x/y dimensions applied to downsampled image(s)
1115s > rm(yy)
1115s > 
1115s > (xx = c(r,r))
1115s stars_proxy object with 2 attributes in 2 file(s):
1115s $L7_ETMs.tif
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s $L7_ETMs.tif
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s dimension(s):
1115s      from  to  offset delta                     refsys point x/y
1115s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s band    1   6      NA    NA                         NA    NA    
1115s > names(xx) = c("a", "b")
1115s > xx["a"]
1115s stars_proxy object with 1 attribute in 1 file(s):
1115s $a
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s dimension(s):
1115s      from  to  offset delta                     refsys point x/y
1115s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s band    1   6      NA    NA                         NA    NA    
1115s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085))
1115s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500)
1115s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])),
1115s +   crs = st_crs(r))
1115s > r = r[buf] # crops
1115s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box
1115s > 
1115s > # c:
1115s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata")
1115s > if (FALSE && f != "") {
1115s +   files = c("avhrr-only-v2.19810901.nc",
1115s +   "avhrr-only-v2.19810902.nc",
1115s +   "avhrr-only-v2.19810903.nc",
1115s +   "avhrr-only-v2.19810904.nc",
1115s +   "avhrr-only-v2.19810905.nc",
1115s +   "avhrr-only-v2.19810906.nc",
1115s +   "avhrr-only-v2.19810907.nc",
1115s +   "avhrr-only-v2.19810908.nc",
1115s +   "avhrr-only-v2.19810909.nc")
1115s +   l = list()
1115s +   for (f in files) {
1115s + 	from = system.file(paste0("netcdf/", f), package = "starsdata")
1115s +   	l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE)
1115s +   }
1115s +   ret = do.call(c, l)
1115s +   print(ret)
1115s +   all = system.file(paste0("netcdf/", files), package = "starsdata")
1115s +   ret = read_stars(all, sub = c("sst", "anom"))
1115s +   print(ret)
1115s +   print(st_redimension(ret)) # collapse the two attributes into new dimension
1115s + 
1115s +   try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2)))
1115s +   #print(ret)
1115s +   #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times")))
1115s +   #print(ret)
1115s +   ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1))
1115s +   print(ret)
1115s + }
1115s > 
1115s > # demonstrate that environments work:
1115s > x = read_stars(tif, proxy = TRUE)
1115s > f = function(x) {
1115s + 	g = function(xx) {
1115s + 		ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1)
1115s + 		st_apply(xx, 1:2, ndvi)
1115s + 	}
1115s + 	g(x)
1115s + }
1115s > (x = f(x))
1115s stars_proxy object with 1 attribute in 1 file(s):
1115s $L7_ETMs.tif
1115s [1] "[...]/L7_ETMs.tif"
1115s 
1115s dimension(s):
1115s      from  to  offset delta                     refsys point x/y
1115s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s band    1   6      NA    NA                         NA    NA    
1115s call_list:
1115s [[1]]
1115s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 
1115s     PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname)
1115s attr(,".Environment")
1115s <environment: 0x14b86ca5b818>
1115s 
1115s This object has pending lazy operations: dimensions as printed may not reflect this.
1115s > st_as_stars(x)
1115s stars object with 2 dimensions and 1 attribute
1115s attribute(s):
1115s             Min.    1st Qu.      Median        Mean     3rd Qu.       Max.
1115s ndvi  -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259
1115s dimension(s):
1115s   from  to  offset delta                     refsys point x/y
1115s x    1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1115s y    1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1115s > 
1115s BEGIN TEST raster.R
1115s 
1115s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1115s Copyright (C) 2024 The R Foundation for Statistical Computing
1115s Platform: powerpc64le-unknown-linux-gnu
1115s 
1115s R is free software and comes with ABSOLUTELY NO WARRANTY.
1115s You are welcome to redistribute it under certain conditions.
1115s Type 'license()' or 'licence()' for distribution details.
1115s 
1115s R is a collaborative project with many contributors.
1115s Type 'contributors()' for more information and
1115s 'citation()' on how to cite R or R packages in publications.
1115s 
1115s Type 'demo()' for some demos, 'help()' for on-line help, or
1115s 'help.start()' for an HTML browser interface to help.
1115s Type 'q()' to quit R.
1115s 
1115s > options(rgdal_show_exportToProj4_warnings = "none")
1115s > suppressPackageStartupMessages(library(stars))
1116s > 
1116s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 
1116s + 	suppressPackageStartupMessages(require("terra", quietly = TRUE))) {
1116s + 
1116s + tif = system.file("tif/L7_ETMs.tif", package = "stars")
1116s + (x = read_stars(tif))
1116s + (r = as(x, "Raster"))
1116s + (y = st_as_stars(r))
1116s + 
1116s + # single band:
1116s + x = adrop(x[,,,1])
1116s + r = as(x, "Raster")
1116s + (y = st_as_stars(r))
1116s + 
1116s + # proxy:
1116s + (x = read_stars(tif, proxy = TRUE))
1116s + (r = as(x, "Raster"))
1116s + (y = st_as_stars(r))
1116s + (y2 = st_as_stars(r, proxy = TRUE))
1116s + }
1123s stars_proxy object with 1 attribute in 1 file(s):
1123s $L7_ETMs.tif
1123s [1] "[...]/L7_ETMs.tif"
1123s 
1123s dimension(s):
1123s      from  to  offset delta                     refsys point x/y
1123s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1123s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1123s band    1   6      NA    NA                         NA    NA    
1123s > 
1123s > if (require(terra, quietly = TRUE)) {
1123s + ## terra -------------
1123s + stopifnot(require(terra))
1123s + (x = read_stars(tif))
1123s + (r = as(x, "SpatRaster"))
1123s + (y = st_as_stars(r))
1123s + 
1123s + # single band:
1123s + x = adrop(x[,,,1])
1123s + r = as(x, "SpatRaster")
1123s + (y = st_as_stars(r))
1123s + 
1123s + # proxy:
1123s + (x = read_stars(tif, proxy = TRUE))
1123s + (r = as(x, "SpatRaster"))
1123s + (y = st_as_stars(r))
1123s + (y2 = st_as_stars(r, proxy = TRUE))
1123s + 
1123s + f = system.file("tif/lc.tif", package = "stars")
1123s + lc = read_stars(system.file("tif/lc.tif", package = "stars"))
1123s + levels(lc[[1]])
1123s + r = rast(lc)
1123s + e = attr(lc[[1]], "exclude")
1123s + 
1123s + if (packageVersion("terra") >= "1.5.48") {
1123s + 
1123s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2]))
1123s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE))
1123s + 
1123s + r<- rast(nrow=10, ncol=10)
1123s + set.seed(5)
1123s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE)
1123s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3"))
1123s + 
1123s + r2<- rast(nrow=10, ncol=10)
1123s + set.seed(6)
1123s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE)
1123s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3"))
1123s + 
1123s + r3<- c(r,r2)
1123s + names(r3)<- c("lyr.1", "lyr.2")
1123s + 
1123s + r3_stars<- st_as_stars(r3)
1123s + 
1123s + st_redimension(r3_stars) |> print()
1123s + rast(r3_stars) |> levels() |> print()
1123s + 
1123s + m = matrix(1:121, 11, 11)
1123s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11))
1123s + s = st_as_stars(bb, values = m)
1123s + r = rast(s)
1123s + aggregate(r, 2) |> st_as_stars() -> r.s
1123s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean))))
1123s + }
1123s + }
1123s [1] TRUE
1123s [1] TRUE
1123s stars object with 3 dimensions and 1 attribute
1123s attribute(s):
1123s  lyr.1.lyr.2 
1123s  c1:34       
1123s  c2:32       
1123s  c3:34       
1123s  x1:28       
1123s  x2:37       
1123s  x3:35       
1123s dimension(s):
1123s         from to offset delta         refsys       values x/y
1123s x          1 10   -180    36 WGS 84 (CRS84)         NULL [x]
1123s y          1 10     90   -18 WGS 84 (CRS84)         NULL [y]
1123s new_dim    1  2     NA    NA             NA lyr.1, lyr.2    
1123s [[1]]
1123s   IDs categories
1123s 1   1         c1
1123s 2   2         c2
1123s 3   3         c3
1123s 
1123s [[2]]
1123s   IDs categories
1123s 1   0         x1
1123s 2   2         x2
1123s 3   3         x3
1123s 
1123s > 
1123s > 
1124s BEGIN TEST rasterize.R
1124s 
1124s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1124s Copyright (C) 2024 The R Foundation for Statistical Computing
1124s Platform: powerpc64le-unknown-linux-gnu
1124s 
1124s R is free software and comes with ABSOLUTELY NO WARRANTY.
1124s You are welcome to redistribute it under certain conditions.
1124s Type 'license()' or 'licence()' for distribution details.
1124s 
1124s R is a collaborative project with many contributors.
1124s Type 'contributors()' for more information and
1124s 'citation()' on how to cite R or R packages in publications.
1124s 
1124s Type 'demo()' for some demos, 'help()' for on-line help, or
1124s 'help.start()' for an HTML browser interface to help.
1124s Type 'q()' to quit R.
1124s 
1124s > suppressPackageStartupMessages(library(stars))
1124s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf"))
1125s > (x = st_rasterize(nc)) # default grid:
1125s stars object with 2 dimensions and 12 attributes
1125s attribute(s):
1125s                 Min.   1st Qu.    Median         Mean   3rd Qu.      Max.  NA's
1125s AREA           0.042     0.108     0.142 1.451932e-01     0.181     0.241 30904
1125s PERIMETER      0.999     1.461     1.716 1.786110e+00     2.004     3.640 30904
1125s CNTY_       1825.000  1907.000  1989.000 1.998403e+03  2085.000  2241.000 30904
1125s CNTY_ID     1825.000  1907.000  1989.000 1.998403e+03  2085.000  2241.000 30904
1125s FIPSNO     37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904
1125s CRESS_ID       1.000    25.000    51.000 5.071206e+01    77.000   100.000 30904
1125s BIR74        248.000  1323.000  2648.000 3.791637e+03  4139.000 21588.000 30904
1125s SID74          0.000     3.000     5.000 7.891985e+00    10.000    44.000 30904
1125s NWBIR74        1.000   297.000   844.000 1.246210e+03  1396.000  8027.000 30904
1125s BIR79        319.000  1606.000  3108.000 4.852046e+03  5400.000 30757.000 30904
1125s SID79          0.000     3.000     6.000 9.584098e+00    13.000    57.000 30904
1125s NWBIR79        3.000   360.000  1058.000 1.604642e+03  1524.000 11631.000 30904
1125s dimension(s):
1125s   from  to offset    delta refsys point x/y
1125s x    1 461 -84.32  0.01925  NAD27 FALSE [x]
1125s y    1 141  36.59 -0.01925  NAD27 FALSE [y]
1125s > plot(x, axes = TRUE)
1125s > # a bit more customized grid:
1125s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_)))
1125s stars object with 2 dimensions and 12 attributes
1125s attribute(s):
1125s                 Min.   1st Qu.    Median         Mean   3rd Qu.      Max. NA's
1125s AREA           0.042     0.108     0.142     0.145536     0.181     0.241 2373
1125s PERIMETER      0.999     1.470     1.716     1.789032     2.004     3.640 2373
1125s CNTY_       1825.000  1908.000  1989.000  1999.761325  2088.000  2241.000 2373
1125s CNTY_ID     1825.000  1908.000  1989.000  1999.761325  2088.000  2241.000 2373
1125s FIPSNO     37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373
1125s CRESS_ID       1.000    25.000    51.000    50.663875    76.000   100.000 2373
1125s BIR74        248.000  1323.500  2648.000  3790.530263  4139.000 21588.000 2373
1125s SID74          0.000     3.000     5.000     7.905976    10.000    44.000 2373
1125s NWBIR74        1.000   289.000   844.000  1246.116483  1396.000  8027.000 2373
1125s BIR79        319.000  1606.000  3108.000  4848.231062  5386.000 30757.000 2373
1125s SID79          0.000     3.000     6.000     9.574419    13.000    57.000 2373
1125s NWBIR79        3.000   360.000  1058.000  1602.740769  1524.000 11631.000 2373
1125s dimension(s):
1125s   from  to offset    delta refsys point x/y
1125s x    1 100 -84.32  0.08867  NAD27 FALSE [x]
1125s y    1  50  36.59 -0.05415  NAD27 FALSE [y]
1125s > plot(x, axes = TRUE)
1125s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05))))))
1125s Simple feature collection with 2 features and 1 field
1125s Geometry type: LINESTRING
1125s Dimension:     XY
1125s Bounding box:  xmin: 0 ymin: 0 xmax: 1.1 ymax: 1
1125s CRS:           NA
1125s   a
1125s 1 1
1125s 2 2
1125s   c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05......
1125s 1                                                                                     LINESTRING (0.1 0, 1.1 1)
1125s 2                                                                                   LINESTRING (0 0.05, 1 0.05)
1125s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_))
1125s stars object with 2 dimensions and 1 attribute
1125s attribute(s):
1125s         Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
1125s values    NA      NA     NA  NaN      NA   NA  100
1125s dimension(s):
1125s   from to offset delta x/y
1125s x    1 10      0   0.1 [x]
1125s y    1 10      1  -0.1 [y]
1125s > # the following two plots confirm that (only) the
1125s > # upper-left corner is part of the grid cell (when dy is negative), leading 
1125s > # to a seemingly half-gridcell-shift problem:
1125s > ## sf_extSoftVersion()["GDAL"]
1125s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE;
1125s > plot(ls, add = TRUE, col = "red")
1125s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE)
1125s > plot(ls, add = TRUE, col = "red")
1126s > # add lines to existing 0 values, summing values in case of multiple lines:
1126s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0))
1126s stars object with 2 dimensions and 1 attribute
1126s attribute(s):
1126s         Min. 1st Qu. Median Mean 3rd Qu. Max.
1126s values     0       0      0    0       0    0
1126s dimension(s):
1126s   from to offset delta x/y
1126s x    1 10      0   0.1 [x]
1126s y    1 10      1  -0.1 [y]
1126s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE"))
1126s > plot(r, axes = TRUE, reset = FALSE)
1126s > plot(ls, add = TRUE, col = "red")
1126s > 
1126s BEGIN TEST rectilinear.R
1126s 
1126s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1126s Copyright (C) 2024 The R Foundation for Statistical Computing
1126s Platform: powerpc64le-unknown-linux-gnu
1126s 
1126s R is free software and comes with ABSOLUTELY NO WARRANTY.
1126s You are welcome to redistribute it under certain conditions.
1126s Type 'license()' or 'licence()' for distribution details.
1126s 
1126s R is a collaborative project with many contributors.
1126s Type 'contributors()' for more information and
1126s 'citation()' on how to cite R or R packages in publications.
1126s 
1126s Type 'demo()' for some demos, 'help()' for on-line help, or
1126s 'help.start()' for an HTML browser interface to help.
1126s Type 'q()' to quit R.
1126s 
1126s > suppressPackageStartupMessages(library(stars))
1126s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1126s > x = read_stars(tif)
1126s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing
1126s stars object with 3 dimensions and 1 attribute
1126s attribute(s):
1126s              Min. 1st Qu. Median    Mean 3rd Qu. Max.
1126s L7_ETMs.tif     1      54     69 68.9915      86  255
1126s dimension(s):
1126s      from  to                     refsys point
1126s x       1 348 SIRGAS 2000 / UTM zone 25S FALSE
1126s y       1 351 SIRGAS 2000 / UTM zone 25S FALSE
1126s band    1   6                         NA    NA
1126s                                       values x/y
1126s x    [288790.5,288819),...,[298708.5,298737) [x]
1126s y    [9120747,9120718),...,[9110743,9110715) [y]
1126s band                                    NULL    
1126s > image(xx) # chooses useRaster itself
1127s >   # see also tidy.R for a ggplot example, leaving out the row.
1127s > 
1127s > m = matrix(1:16, 4, 4)
1127s > x = 1:4
1127s > y = 2:5
1127s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y)))
1127s Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 
1127s   length of values ( 6 ) does not match length of dimension 2 ( 4 )
1127s stars object with 2 dimensions and 1 attribute
1127s attribute(s):
1127s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1127s m     1    4.75    8.5  8.5   12.25   16
1127s dimension(s):
1127s   from to offset delta point x/y
1127s x    1  4      1     1 FALSE [x]
1127s y    1  4      2     1 FALSE [y]
1127s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6))
1127s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8))
1127s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many
1127s > 
1127s > # $<-.stars:
1127s > st$foo = st$m * 2
1127s > st
1127s stars object with 2 dimensions and 2 attributes
1127s attribute(s):
1127s      Min. 1st Qu. Median Mean 3rd Qu. Max.
1127s m       1    4.75    8.5  8.5   12.25   16
1127s foo     2    9.50   17.0 17.0   24.50   32
1127s dimension(s):
1127s   from to point          values x/y
1127s x    1  4 FALSE [1,2),...,[4,6) [x]
1127s y    1  4 FALSE [2,3),...,[5,8) [y]
1127s > 
1127s > # st_as_sf:
1127s > 
1127s > if (utils::packageVersion("sf") > "0.7.2") {
1127s + 	plot(st_as_sf(st, as_points = FALSE), axes = TRUE)
1127s + }
1127s > 
1127s > image(st, text_values = TRUE, axes = TRUE)
1127s > 
1127s BEGIN TEST redimension.R
1127s 
1127s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1127s Copyright (C) 2024 The R Foundation for Statistical Computing
1127s Platform: powerpc64le-unknown-linux-gnu
1127s 
1127s R is free software and comes with ABSOLUTELY NO WARRANTY.
1127s You are welcome to redistribute it under certain conditions.
1127s Type 'license()' or 'licence()' for distribution details.
1127s 
1127s R is a collaborative project with many contributors.
1127s Type 'contributors()' for more information and
1127s 'citation()' on how to cite R or R packages in publications.
1127s 
1127s Type 'demo()' for some demos, 'help()' for on-line help, or
1127s 'help.start()' for an HTML browser interface to help.
1127s Type 'q()' to quit R.
1127s 
1127s > suppressPackageStartupMessages(library(stars))
1128s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1128s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE)
1128s > (xx = st_redimension(r, along = list(foo = 1:4)))
1128s stars_proxy object with 1 attribute in 4 file(s):
1128s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif"
1128s 
1128s dimension(s):
1128s      from  to  offset delta                     refsys point x/y
1128s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1128s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1128s band    1   6      NA    NA                         NA    NA    
1128s foo     1   4       1     1                         NA    NA    
1128s > (rr = c(xx, xx))
1128s stars_proxy object with 2 attributes in 8 file(s):
1128s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif"
1128s 
1128s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif"
1128s 
1128s dimension(s):
1128s      from  to  offset delta                     refsys point x/y
1128s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1128s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1128s band    1   6      NA    NA                         NA    NA    
1128s foo     1   4       1     1                         NA    NA    
1128s > # st_as_stars(rr)
1128s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01")))))
1128s stars_proxy object with 1 attribute in 8 file(s):
1128s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s 
1128s dimension(s):
1128s      from  to     offset    delta                     refsys point x/y
1128s x       1 349     288776     28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1128s y       1 352    9120761    -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1128s band    1   6         NA       NA                         NA    NA    
1128s foo     1   4          1        1                         NA    NA    
1128s bar     1   2 2001-01-01 365 days                       Date    NA    
1128s > (rr = c(a = xx, b = xx))
1128s stars_proxy object with 2 attributes in 8 file(s):
1128s $a
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif"
1128s 
1128s $b
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif"
1128s 
1128s dimension(s):
1128s      from  to  offset delta                     refsys point x/y
1128s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1128s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1128s band    1   6      NA    NA                         NA    NA    
1128s foo     1   4       1     1                         NA    NA    
1128s > # st_as_stars(rr)
1128s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01")))))
1128s stars_proxy object with 1 attribute in 8 file(s):
1128s $a.b
1128s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif"
1128s 
1128s dimension(s):
1128s      from  to     offset    delta                     refsys point x/y
1128s x       1 349     288776     28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1128s y       1 352    9120761    -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1128s band    1   6         NA       NA                         NA    NA    
1128s foo     1   4          1        1                         NA    NA    
1128s bar     1   2 2001-01-01 365 days                       Date    NA    
1128s > 
1128s BEGIN TEST sf.R
1128s 
1128s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1128s Copyright (C) 2024 The R Foundation for Statistical Computing
1128s Platform: powerpc64le-unknown-linux-gnu
1128s 
1128s R is free software and comes with ABSOLUTELY NO WARRANTY.
1128s You are welcome to redistribute it under certain conditions.
1128s Type 'license()' or 'licence()' for distribution details.
1128s 
1128s R is a collaborative project with many contributors.
1128s Type 'contributors()' for more information and
1128s 'citation()' on how to cite R or R packages in publications.
1128s 
1128s Type 'demo()' for some demos, 'help()' for on-line help, or
1128s 'help.start()' for an HTML browser interface to help.
1128s Type 'q()' to quit R.
1128s 
1128s > suppressPackageStartupMessages(library(stars))
1129s > library(sf)
1129s > #jp2 = system.file("jp2/B01.jp2", package = "stars")
1129s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3")))
1129s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1129s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows
1129s > (x = read_stars(tif)[,1:20,1:20])
1129s stars object with 3 dimensions and 1 attribute
1129s attribute(s):
1129s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1129s L7_ETMs.tif    17      44     58 58.19667      70  130
1129s dimension(s):
1129s      from to  offset delta                     refsys point x/y
1129s x       1 20  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1129s y       1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1129s band    1  6      NA    NA                         NA    NA    
1129s > # names(x) = "L7_ETM"
1129s > 
1129s > # library(abind)
1129s > # x = adrop(x)
1129s > image(x)
1129s > (sfc = st_as_sfc(x, as_points = FALSE))
1129s Geometry set for 400 features 
1129s Geometry type: POLYGON
1129s Dimension:     XY
1129s Bounding box:  xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761
1129s Projected CRS: SIRGAS 2000 / UTM zone 25S
1129s First 5 geometries:
1129s POLYGON ((288776.3 9120761, 288804.8 9120761, 2...
1129s POLYGON ((288804.8 9120761, 288833.3 9120761, 2...
1129s POLYGON ((288833.3 9120761, 288861.8 9120761, 2...
1129s POLYGON ((288861.8 9120761, 288890.3 9120761, 2...
1129s POLYGON ((288890.3 9120761, 288918.8 9120761, 2...
1129s > plot(sfc, add  =TRUE)
1129s > (sfc = st_as_sfc(x, as_points = TRUE))
1129s Geometry set for 400 features 
1129s Geometry type: POINT
1129s Dimension:     XY
1129s Bounding box:  xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747
1129s POINT (288790.5 9120747)
1129s POINT (288819 9120747)
1129s Projected CRS: SIRGAS 2000 / UTM zone 25S
1129s First 5 geometries:
1129s POINT (288847.5 9120747)
1129s POINT (288876 9120747)
1129s POINT (288904.5 9120747)
1129s > plot(sfc, add = TRUE)
1129s > 
1129s > sf = st_as_sf(x, as_points = FALSE)
1129s > plot(sf, border = NA)
1129s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE)
1129s > plot(sf, border = NA)
1129s > 
1129s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE)
1129s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE)
1129s > identical(sfc1, sfc2)
1129s [1] TRUE
1129s > 
1129s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE)
1129s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE)
1129s > identical(sfc1, sfc2)
1129s [1] TRUE
1129s > 
1129s > # sf -> stars -> sf
1129s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3))
1129s > m = matrix(1:9,3)
1129s > colnames(m) = c("a", "b", "c")
1129s > foo = st_sf(m, geom = x)
1129s > x = st_as_stars(foo)
1129s > c(x)
1129s stars object with 1 dimensions and 3 attributes
1129s attribute(s):
1129s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1129s a     1     1.5      2    2     2.5    3
1129s b     4     4.5      5    5     5.5    6
1129s c     7     7.5      8    8     8.5    9
1129s dimension(s):
1129s      from to point                      values
1129s geom    1  3  TRUE POINT (0 1),...,POINT (2 3)
1129s > st_redimension(x)
1129s stars object with 2 dimensions and 1 attribute
1129s attribute(s):
1129s        Min. 1st Qu. Median Mean 3rd Qu. Max.
1129s a.b.c     1       3      5    5       7    9
1129s dimension(s):
1129s         from to point                      values
1129s geom       1  3  TRUE POINT (0 1),...,POINT (2 3)
1129s new_dim    1  3    NA                     a, b, c
1129s > c(x, x)
1130s stars object with 1 dimensions and 6 attributes
1130s attribute(s):
1130s      Min. 1st Qu. Median Mean 3rd Qu. Max.
1130s a       1     1.5      2    2     2.5    3
1130s b       4     4.5      5    5     5.5    6
1130s c       7     7.5      8    8     8.5    9
1130s a.1     1     1.5      2    2     2.5    3
1130s b.1     4     4.5      5    5     5.5    6
1130s c.1     7     7.5      8    8     8.5    9
1130s dimension(s):
1130s      from to point                      values
1130s geom    1  3  TRUE POINT (0 1),...,POINT (2 3)
1130s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2)))
1130s stars object with 2 dimensions and 1 attribute
1130s attribute(s):
1130s        Min. 1st Qu. Median Mean 3rd Qu. Max.
1130s a.b.c     1       3      5    5       7    9
1130s dimension(s):
1130s      from to     offset  delta refsys point                      values
1130s geom    1  3         NA     NA     NA  TRUE POINT (0 1),...,POINT (2 3)
1130s time    1  3 2017-11-27 1 days   Date    NA                        NULL
1130s > st_as_sf(y)
1130s Simple feature collection with 3 features and 3 fields
1130s Geometry type: POINT
1130s Dimension:     XY
1130s Bounding box:  xmin: 0 ymin: 1 xmax: 2 ymax: 3
1130s CRS:           NA
1130s   2017-11-27 2017-11-28 2017-11-29        geom
1130s 1          1          4          7 POINT (0 1)
1130s 2          2          5          8 POINT (1 2)
1130s 3          3          6          9 POINT (2 3)
1130s > st_as_sf(st_as_stars(foo))
1130s Simple feature collection with 3 features and 3 fields
1130s Geometry type: POINT
1130s Dimension:     XY
1130s Bounding box:  xmin: 0 ymin: 1 xmax: 2 ymax: 3
1130s CRS:           NA
1130s   a b c        geom
1130s 1 1 4 7 POINT (0 1)
1130s 2 2 5 8 POINT (1 2)
1130s 3 3 6 9 POINT (2 3)
1130s > 
1130s > c(x,x,along=1) # NEEDS FIXING!
1130s stars object with 1 dimensions and 3 attributes
1130s attribute(s):
1130s    Min. 1st Qu. Median Mean 3rd Qu. Max.
1130s a     1    1.25      2    2    2.75    3
1130s b     4    4.25      5    5    5.75    6
1130s c     7    7.25      8    8    8.75    9
1130s dimension(s):
1130s      from to point                      values
1130s geom    1  6  TRUE POINT (0 1),...,POINT (2 3)
1130s > # st_as_stars.sfc
1130s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE)
1130s stars object with 2 dimensions and 1 attribute
1130s attribute(s):
1130s         Min. 1st Qu. Median Mean 3rd Qu. Max.
1130s values     0       0      0 0.06       0    1
1130s dimension(s):
1130s   from to offset delta x/y
1130s x    1 10      0   0.2 [x]
1130s y    1 10      3  -0.2 [y]
1130s > 
1130s BEGIN TEST sp.R
1130s 
1130s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1130s Copyright (C) 2024 The R Foundation for Statistical Computing
1130s Platform: powerpc64le-unknown-linux-gnu
1130s 
1130s R is free software and comes with ABSOLUTELY NO WARRANTY.
1130s You are welcome to redistribute it under certain conditions.
1130s Type 'license()' or 'licence()' for distribution details.
1130s 
1130s R is a collaborative project with many contributors.
1130s Type 'contributors()' for more information and
1130s 'citation()' on how to cite R or R packages in publications.
1130s 
1130s Type 'demo()' for some demos, 'help()' for on-line help, or
1130s 'help.start()' for an HTML browser interface to help.
1130s Type 'q()' to quit R.
1130s 
1130s > options(rgdal_show_exportToProj4_warnings = "none")
1130s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) {
1130s + demo(meuse)
1130s + # remove +init=xxx
1130s + meuse@proj4string = CRS(
1130s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"
1130s + )
1130s + meuse.grid@proj4string = CRS(
1130s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs"
1130s + )
1130s + 
1130s + suppressPackageStartupMessages(library(stars))
1130s + (m = st_as_stars(meuse))
1130s + (gr = st_as_stars(meuse.grid))
1130s + 
1130s + m2 = as(m, "Spatial")
1130s + summary(m2)
1130s + gr2 = as(gr, "Spatial")
1130s + summary(gr2)
1130s + 
1130s + all.equal(meuse, m2, check.attributes = FALSE)
1130s + fullgrid(meuse.grid) = TRUE
1130s + all.equal(meuse.grid, gr2, check.attributes = FALSE)
1130s + 
1130s + #all.equal(meuse, m2)
1130s + #all.equal(meuse.grid, gr2)
1130s + }
1130s 
1130s 
1130s 	demo(meuse)
1130s 	---- ~~~~~
1130s 
1130s > require(sp)
1130s 
1130s > crs = CRS("EPSG:28992")
1130s 
1130s > data("meuse")
1130s 
1130s > coordinates(meuse) <- ~x+y
1130s 
1130s > proj4string(meuse) <- crs
1130s 
1130s > data("meuse.grid")
1130s 
1130s > coordinates(meuse.grid) <- ~x+y
1130s 
1130s > gridded(meuse.grid) <- TRUE
1130s 
1130s > proj4string(meuse.grid) <- crs
1130s 
1130s > data("meuse.riv")
1130s 
1130s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv")))
1130s 
1130s > proj4string(meuse.riv) <- crs
1130s 
1130s > data("meuse.area")
1130s 
1130s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area")))
1130s 
1130s > proj4string(meuse.area) <- crs
1131s [1] TRUE
1131s > 
1131s BEGIN TEST spacetime.R
1131s 
1131s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1131s Copyright (C) 2024 The R Foundation for Statistical Computing
1131s Platform: powerpc64le-unknown-linux-gnu
1131s 
1131s R is free software and comes with ABSOLUTELY NO WARRANTY.
1131s You are welcome to redistribute it under certain conditions.
1131s Type 'license()' or 'licence()' for distribution details.
1131s 
1131s R is a collaborative project with many contributors.
1131s Type 'contributors()' for more information and
1131s 'citation()' on how to cite R or R packages in publications.
1131s 
1131s Type 'demo()' for some demos, 'help()' for on-line help, or
1131s 'help.start()' for an HTML browser interface to help.
1131s Type 'q()' to quit R.
1131s 
1131s > suppressPackageStartupMessages(library(stars))
1132s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) {
1132s + set.seed(1331)
1132s + Sys.setenv(TZ="UTC")
1132s + example(STFDF)
1132s + 
1132s + x = st_as_stars(stfdf)
1132s + xx = as(x, "STFDF")
1132s + 
1132s + # as.xts.stars:
1132s + library(xts)
1132s + xts = as.xts(x)
1132s + st_as_stars(xts)
1132s + st_as_stars(xts, dimensions = st_dimensions(x))
1132s + 
1132s + library(sp)
1132s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1)))
1132s + gridded(pts) = TRUE
1132s + 
1132s + tm = xts(1:10, as.Date("2010-01-01")+0:9)
1132s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm))))
1132s + x = st_as_stars(stfdf)
1132s + xx = as(x, "STFDF")
1132s + 
1132s + x = st_as_stars(as(stfdf, "STSDF"))
1132s + }
1132s 
1132s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1))
1132s 
1132s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="")
1132s 
1132s STFDF> library(sp)
1132s 
1132s STFDF> sp = SpatialPoints(sp)
1132s 
1132s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13)
1132s 
1132s STFDF> m = c(10,20,30) # means for each of the 3 point locations
1132s 
1132s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4))
1132s 
1132s STFDF> IDs = paste("ID",1:length(mydata))
1132s 
1132s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs)
1132s 
1132s STFDF> stfdf = STFDF(sp, time, mydata)
1132s 
1132s STFDF> stfdf
1132s An object of class "STFDF"
1132s Slot "data":
1132s    values    ID
1132s 1    9.38  ID 1
1132s 2   21.10  ID 2
1132s 3   29.80  ID 3
1132s 4   11.50  ID 4
1132s 5   19.80  ID 5
1132s 6   31.20  ID 6
1132s 7   10.40  ID 7
1132s 8   20.50  ID 8
1132s 9   29.80  ID 9
1132s 10  10.30 ID 10
1132s 11  21.40 ID 11
1132s 12  29.40 ID 12
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s point3 1 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 2010-08-05 12:00:00         3
1132s 2010-08-05 13:00:00         4
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC"
1132s 
1132s 
1132s STFDF> stfdf[1:2,]
1132s An object of class "STFDF"
1132s Slot "data":
1132s   values    ID
1132s 1   9.38  ID 1
1132s 2  21.10  ID 2
1132s 3  11.50  ID 4
1132s 4  19.80  ID 5
1132s 5  10.40  ID 7
1132s 6  20.50  ID 8
1132s 7  10.30 ID 10
1132s 8  21.40 ID 11
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 2010-08-05 12:00:00         3
1132s 2010-08-05 13:00:00         4
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC"
1132s 
1132s 
1132s STFDF> stfdf[,1:2]
1132s An object of class "STFDF"
1132s Slot "data":
1132s   values   ID
1132s 1   9.38 ID 1
1132s 2  21.10 ID 2
1132s 3  29.80 ID 3
1132s 4  11.50 ID 4
1132s 5  19.80 ID 5
1132s 6  31.20 ID 6
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s point3 1 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s 
1132s 
1132s STFDF> stfdf[,,2]
1132s An object of class "STFDF"
1132s Slot "data":
1132s       ID
1132s 1   ID 1
1132s 2   ID 2
1132s 3   ID 3
1132s 4   ID 4
1132s 5   ID 5
1132s 6   ID 6
1132s 7   ID 7
1132s 8   ID 8
1132s 9   ID 9
1132s 10 ID 10
1132s 11 ID 11
1132s 12 ID 12
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s point3 1 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 2010-08-05 12:00:00         3
1132s 2010-08-05 13:00:00         4
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC"
1132s 
1132s 
1132s STFDF> stfdf[,,"values"]
1132s An object of class "STFDF"
1132s Slot "data":
1132s    values
1132s 1    9.38
1132s 2   21.10
1132s 3   29.80
1132s 4   11.50
1132s 5   19.80
1132s 6   31.20
1132s 7   10.40
1132s 8   20.50
1132s 9   29.80
1132s 10  10.30
1132s 11  21.40
1132s 12  29.40
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s point3 1 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 2010-08-05 12:00:00         3
1132s 2010-08-05 13:00:00         4
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC"
1132s 
1132s 
1132s STFDF> stfdf[1,]
1132s                     values    ID timeIndex
1132s 2010-08-05 10:00:00   9.38  ID 1         1
1132s 2010-08-05 11:00:00  11.50  ID 4         2
1132s 2010-08-05 12:00:00  10.40  ID 7         3
1132s 2010-08-05 13:00:00  10.30 ID 10         4
1132s 
1132s STFDF> stfdf[,2]
1132s   coordinates values   ID
1132s 1      (0, 0)   11.5 ID 4
1132s 2      (0, 1)   19.8 ID 5
1132s 3      (1, 1)   31.2 ID 6
1132s 
1132s STFDF> as(stfdf[,,1], "xts")
1132s                     point1 point2 point3
1132s 2010-08-05 10:00:00   9.38   21.1   29.8
1132s 2010-08-05 11:00:00  11.50   19.8   31.2
1132s 2010-08-05 12:00:00  10.40   20.5   29.8
1132s 2010-08-05 13:00:00  10.30   21.4   29.4
1132s 
1132s STFDF> as(stfdf[,,2], "xts")
1132s                     point1 point2 point3
1132s 2010-08-05 10:00:00   ID 1   ID 2   ID 3
1132s 2010-08-05 11:00:00   ID 4   ID 5   ID 6
1132s 2010-08-05 12:00:00   ID 7   ID 8   ID 9
1132s 2010-08-05 13:00:00  ID 10  ID 11  ID 12
1132s 
1132s STFDF> # examples for [[, [[<-, $ and $<- 
1132s STFDF> stfdf[[1]]
1132s  [1]  9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40
1132s 
1132s STFDF> stfdf[["values"]]
1132s  [1]  9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40
1132s 
1132s STFDF> stfdf[["newVal"]] <- rnorm(12)
1132s 
1132s STFDF> stfdf$ID
1132s  [1] "ID 1"  "ID 2"  "ID 3"  "ID 4"  "ID 5"  "ID 6"  "ID 7"  "ID 8"  "ID 9" 
1132s [10] "ID 10" "ID 11" "ID 12"
1132s 
1132s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="")
1132s 
1132s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="")
1132s 
1132s STFDF> stfdf
1132s An object of class "STFDF"
1132s Slot "data":
1132s    values       ID     newVal    NewID
1132s 1    9.38  OldIDs1 -0.3125824 NewIDs12
1132s 2   21.10  OldIDs2 -1.0536246 NewIDs11
1132s 3   29.80  OldIDs3 -0.7188880 NewIDs10
1132s 4   11.50  OldIDs4 -1.0525404  NewIDs9
1132s 5   19.80  OldIDs5 -0.8441413  NewIDs8
1132s 6   31.20  OldIDs6  1.1420848  NewIDs7
1132s 7   10.40  OldIDs7  1.9479070  NewIDs6
1132s 8   20.50  OldIDs8 -0.4512836  NewIDs5
1132s 9   29.80  OldIDs9  0.6695716  NewIDs4
1132s 10  10.30 OldIDs10  0.1269003  NewIDs3
1132s 11  21.40 OldIDs11 -0.7273297  NewIDs2
1132s 12  29.40 OldIDs12 -0.8151803  NewIDs1
1132s 
1132s Slot "sp":
1132s SpatialPoints:
1132s        x y
1132s point1 0 0
1132s point2 0 1
1132s point3 1 1
1132s Coordinate Reference System (CRS) arguments: NA 
1132s 
1132s Slot "time":
1132s                     timeIndex
1132s 2010-08-05 10:00:00         1
1132s 2010-08-05 11:00:00         2
1132s 2010-08-05 12:00:00         3
1132s 2010-08-05 13:00:00         4
1132s 
1132s Slot "endTime":
1132s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC"
1132s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC"
1132s 
1132s 
1132s STFDF> x = stfdf[stfdf[1:2,],] 
1132s 
1132s STFDF> all.equal(x, stfdf[1:2,]) 
1132s [1] TRUE
1132s 
1132s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor...
1132s [1] TRUE
1133s Loading required package: zoo
1133s 
1133s Attaching package: 'zoo'
1133s 
1133s The following objects are masked from 'package:base':
1133s 
1133s     as.Date, as.Date.numeric
1133s 
1133s only the first attribute will used; maybe use merge() first?
1133s > 
1133s BEGIN TEST spatstat.R
1133s 
1133s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1133s Copyright (C) 2024 The R Foundation for Statistical Computing
1133s Platform: powerpc64le-unknown-linux-gnu
1133s 
1133s R is free software and comes with ABSOLUTELY NO WARRANTY.
1133s You are welcome to redistribute it under certain conditions.
1133s Type 'license()' or 'licence()' for distribution details.
1133s 
1133s R is a collaborative project with many contributors.
1133s Type 'contributors()' for more information and
1133s 'citation()' on how to cite R or R packages in publications.
1133s 
1133s Type 'demo()' for some demos, 'help()' for on-line help, or
1133s 'help.start()' for an HTML browser interface to help.
1133s Type 'q()' to quit R.
1133s 
1133s > suppressPackageStartupMessages(library(sf))
1133s > 
1133s > library(stars)
1133s Loading required package: abind
1134s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) {
1134s + tif = system.file("tif/L7_ETMs.tif", package = "stars")
1134s + s = adrop(read_stars(tif)[,,,1]) > 70
1134s + plot(s)
1134s + m = as.owin(s)
1134s + plot(m)
1134s + print(table(m$m))
1134s + }
1135s 
1135s FALSE  TRUE 
1135s 39494 83354 
1135s > 
1135s BEGIN TEST stars.R
1135s 
1135s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1135s Copyright (C) 2024 The R Foundation for Statistical Computing
1135s Platform: powerpc64le-unknown-linux-gnu
1135s 
1135s R is free software and comes with ABSOLUTELY NO WARRANTY.
1135s You are welcome to redistribute it under certain conditions.
1135s Type 'license()' or 'licence()' for distribution details.
1135s 
1135s R is a collaborative project with many contributors.
1135s Type 'contributors()' for more information and
1135s 'citation()' on how to cite R or R packages in publications.
1135s 
1135s Type 'demo()' for some demos, 'help()' for on-line help, or
1135s 'help.start()' for an HTML browser interface to help.
1135s Type 'q()' to quit R.
1135s 
1135s > Sys.setenv(TZ="UTC")
1135s > suppressPackageStartupMessages(library(stars))
1136s > set.seed(13521) # runif
1136s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1136s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect
1136s stars object with 3 dimensions and 2 attributes
1136s attribute(s):
1136s                Min. 1st Qu. Median     Mean 3rd Qu. Max.
1136s L7_ETMs.tif       1      54     69 68.91242      86  255
1136s L7_ETMs.tif.1     1      54     69 68.91242      86  255
1136s dimension(s):
1136s      from  to  offset delta                     refsys point x/y
1136s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1136s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1136s band    1   6      NA    NA                         NA    NA    
1136s > (x = read_stars(tif))
1136s stars object with 3 dimensions and 1 attribute
1136s attribute(s):
1136s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1136s L7_ETMs.tif     1      54     69 68.91242      86  255
1136s dimension(s):
1136s      from  to  offset delta                     refsys point x/y
1136s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1136s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1136s band    1   6      NA    NA                         NA    NA    
1136s > # image(x)
1136s > gdal_crs(tif)
1136s Coordinate Reference System:
1136s   User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 
1136s   wkt:
1136s PROJCRS["SIRGAS 2000 / UTM zone 25S",
1136s     BASEGEOGCRS["SIRGAS 2000",
1136s         DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000",
1136s             ELLIPSOID["GRS 1980",6378137,298.257222101,
1136s                 LENGTHUNIT["metre",1]]],
1136s         PRIMEM["Greenwich",0,
1136s             ANGLEUNIT["degree",0.0174532925199433]],
1136s         ID["EPSG",4674]],
1136s     CONVERSION["UTM zone 25S",
1136s         METHOD["Transverse Mercator",
1136s             ID["EPSG",9807]],
1136s         PARAMETER["Latitude of natural origin",0,
1136s             ANGLEUNIT["degree",0.0174532925199433],
1136s             ID["EPSG",8801]],
1136s         PARAMETER["Longitude of natural origin",-33,
1136s             ANGLEUNIT["degree",0.0174532925199433],
1136s             ID["EPSG",8802]],
1136s         PARAMETER["Scale factor at natural origin",0.9996,
1136s             SCALEUNIT["unity",1],
1136s             ID["EPSG",8805]],
1136s         PARAMETER["False easting",500000,
1136s             LENGTHUNIT["metre",1],
1136s             ID["EPSG",8806]],
1136s         PARAMETER["False northing",10000000,
1136s             LENGTHUNIT["metre",1],
1136s             ID["EPSG",8807]]],
1136s     CS[Cartesian,2],
1136s         AXIS["easting",east,
1136s             ORDER[1],
1136s             LENGTHUNIT["metre",1]],
1136s         AXIS["northing",north,
1136s             ORDER[2],
1136s             LENGTHUNIT["metre",1]],
1136s     ID["EPSG",31985]]
1136s > plot(x)
1137s > plot(x, join_zlim = FALSE)
1137s > x %>% st_set_dimensions(names = c('a', 'b', 'c'))
1137s stars object with 3 dimensions and 1 attribute
1137s attribute(s):
1137s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1137s L7_ETMs.tif     1      54     69 68.91242      86  255
1137s dimension(s):
1137s   from  to  offset delta                     refsys point x/y
1137s a    1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1137s b    1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1137s c    1   6      NA    NA                         NA    NA    
1137s > st_get_dimension_values(x, 3)
1137s [1] 1 2 3 4 5 6
1137s > 
1137s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE))
1137s stars object with 3 dimensions and 1 attribute
1137s attribute(s):
1137s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1137s L7_ETMs.tif     1      54     69 68.91242      86  255
1137s dimension(s):
1138s             from  to  offset delta                     refsys point  values x/y
1138s x              1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [x]
1138s y              1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [y]
1138s band_number    1   6      NA    NA                         NA  TRUE 1,...,7    
1138s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>%
1138s + 	units::set_units(um) -> bw # units::set_units(µm) -> bw
1138s > # set bandwidth midpoint:
1138s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 
1138s +    names = "bandwidth_midpoint", point = TRUE))
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1138s L7_ETMs.tif     1      54     69 68.91242      86  255
1138s dimension(s):
1138s                    from  to  offset delta                     refsys point
1138s x                     1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE
1138s y                     1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE
1138s bandwidth_midpoint    1   6      NA    NA                    udunits  TRUE
1138s                                        values x/y
1138s x                                        NULL [x]
1138s y                                        NULL [y]
1138s bandwidth_midpoint 0.4825 [um],...,2.215 [um]    
1138s > # set bandwidth intervals:
1138s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth"))
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1138s L7_ETMs.tif     1      54     69 68.91242      86  255
1138s dimension(s):
1138s           from  to  offset delta                     refsys point
1138s x            1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE
1138s y            1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE
1138s bandwidth    1   6      NA    NA                    udunits    NA
1138s                                           values x/y
1138s x                                           NULL [x]
1138s y                                           NULL [y]
1138s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um]    
1138s > 
1138s > x + x
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1138s L7_ETMs.tif     2     108    138 137.8248     172  510
1138s dimension(s):
1138s      from  to  offset delta                     refsys point x/y
1138s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1138s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1138s band    1   6      NA    NA                         NA    NA    
1138s > x * x
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median    Mean 3rd Qu.  Max.
1138s L7_ETMs.tif     1    2916   4761 5512.41    7396 65025
1138s dimension(s):
1138s      from  to  offset delta                     refsys point x/y
1138s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1138s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1138s band    1   6      NA    NA                         NA    NA    
1138s > x[,,,1:3]
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1138s L7_ETMs.tif    21      58     70 70.36041      83  255
1138s dimension(s):
1138s      from  to  offset delta                     refsys point x/y
1138s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1138s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1138s band    1   3      NA    NA                         NA    NA    
1138s > x[,1:100,100:200,]
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1138s L7_ETMs.tif    13      54     65 67.21531      77  252
1138s dimension(s):
1138s      from  to  offset delta                     refsys point x/y
1138s x       1 100  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1138s y     100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1138s band    1   6      NA    NA                         NA    NA    
1138s > sqrt(x)
1138s stars object with 3 dimensions and 1 attribute
1138s attribute(s):
1138s              Min.  1st Qu.   Median     Mean  3rd Qu.     Max.
1138s L7_ETMs.tif     1 7.348469 8.306624 8.094006 9.273618 15.96872
1138s dimension(s):
1138s      from  to  offset delta                     refsys point x/y
1138s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1138s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1138s band    1   6      NA    NA                         NA    NA    
1138s > st_apply(x, 3, min)
1138s stars object with 1 dimensions and 1 attribute
1138s attribute(s):
1138s      Min. 1st Qu. Median Mean 3rd Qu. Max.
1138s min     1       3     15 18.5   29.25   47
1138s dimension(s):
1138s      from to
1138s band    1  6
1138s > st_apply(x, 1:2, max)
1139s stars object with 2 dimensions and 1 attribute
1139s attribute(s):
1139s      Min. 1st Qu. Median     Mean 3rd Qu. Max.
1139s max    55      85     96 99.36018     113  255
1139s dimension(s):
1139s   from  to  offset delta                     refsys point x/y
1139s x    1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1139s y    1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1139s > st_apply(x, 1:2, range)
1140s stars object with 3 dimensions and 1 attribute
1140s attribute(s):
1140s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1140s L7_ETMs.tif     1      50     71 72.43565      96  255
1140s dimension(s):
1140s       from  to  offset delta                     refsys point x/y
1140s range    1   2      NA    NA                         NA    NA    
1140s x        1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1140s y        1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1140s > 
1140s > geomatrix = system.file("tif/geomatrix.tif", package = "stars")
1140s > x = read_stars(geomatrix)
1140s > y = st_transform(x, st_crs(4326))
1140s > st_coordinates(x)[1:2,]
1140s         x       y
1140s 1 1841000 1144000
1140s 2 1841002 1143995
1140s > 
1140s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars")
1140s > if (nc != "" && require(PCICt, quietly = TRUE)) {
1140s +   print(x <- read_stars(nc))
1140s +   print(st_bbox(x))
1140s +   s = st_as_stars(st_bbox(x)) # inside = NA
1140s +   print(st_bbox(s))
1140s +   s = st_as_stars(st_bbox(x), inside = TRUE)
1140s +   print(st_bbox(s))
1140s +   s = st_as_stars(st_bbox(x), inside = FALSE)
1140s +   print(st_bbox(s))
1140s +   (s = st_as_stars(st_bbox(x), dy = 1))
1140s +   print(st_bbox(s))
1140s +   print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1)))
1140s +   s = st_as_stars(st_bbox(x), dx = 10)
1140s +   print(st_bbox(s))
1140s +   s = st_as_stars(st_bbox(x), dx = 20)
1140s +   print(st_bbox(s))
1140s +   x1 = x
1140s +   st_crs(x1) = "OGC:CRS84"
1140s +   print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree))))
1140s + 
1140s +   df = as.data.frame(x)
1140s +   if (require(units, quietly = TRUE))
1140s +     print(units::drop_units(x))
1140s + 
1140s +   print(dimnames(x))
1140s +   dimnames(x) <- letters[1:3]
1140s +   print(dimnames(x))
1140s + } # PCICt
1140s > 
1140s > st_as_stars()
1140s stars object with 2 dimensions and 1 attribute
1140s attribute(s):
1140s         Min. 1st Qu. Median Mean 3rd Qu. Max.
1140s values     0       0      0    0       0    0
1140s dimension(s):
1140s   from  to offset delta         refsys x/y
1140s x    1 360   -180     1 WGS 84 (CRS84) [x]
1140s y    1 180     90    -1 WGS 84 (CRS84) [y]
1140s > 
1140s > # multiple sub-datasets:
1140s > nc_red = system.file("nc/reduced.nc", package = "stars")
1140s > red = read_stars(nc_red)
1140s sst, anom, err, ice, 
1140s > red
1140s stars object with 4 dimensions and 4 attributes
1140s attribute(s):
1140s                         Min. 1st Qu. Median       Mean 3rd Qu.  Max.  NA's
1140s sst [degree_Celsius]   -1.80   -0.03 13.655 12.9940841 24.8125 32.97  4448
1140s anom [degree_Celsius] -10.16   -0.58 -0.080 -0.1855812  0.2100  2.99  4448
1140s err [degree_Celsius]    0.11    0.16  0.270  0.2626872  0.3200  0.84  4448
1140s ice [percent]           0.01    0.47  0.920  0.7178118  0.9600  1.00 13266
1140s dimension(s):
1140s      from  to         offset delta  refsys x/y
1140s x       1 180             -1     2      NA [x]
1140s y       1  90             90    -2      NA [y]
1140s zlev    1   1          0 [m]    NA      NA    
1140s time    1   1 1981-12-31 UTC    NA POSIXct    
1140s > plot(red)
1140s > 
1140s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE)
1140s > st_bbox(x)
1140s      xmin      ymin      xmax      ymax 
1140s  288776.3 9120475.8  289061.3 9120760.8 
1140s > x = read_stars(tif)
1140s > merge(split(x, "band"))
1140s stars object with 3 dimensions and 1 attribute
1140s attribute(s):
1141s                    Min. 1st Qu. Median     Mean 3rd Qu. Max.
1141s X1.X2.X3.X4.X5.X6     1      54     69 68.91242      86  255
1141s dimension(s):
1141s            from  to  offset delta                     refsys point    values
1141s x             1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE      NULL
1141s y             1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE      NULL
1141s attributes    1   6      NA    NA                         NA    NA X1,...,X6
1141s            x/y
1141s x          [x]
1141s y          [y]
1141s attributes    
1141s > 
1141s > read_stars(c(tif,tif)) # merges as attributes
1141s stars object with 3 dimensions and 2 attributes
1141s attribute(s):
1141s                Min. 1st Qu. Median     Mean 3rd Qu. Max.
1141s L7_ETMs.tif       1      54     69 68.91242      86  255
1141s L7_ETMs.tif.1     1      54     69 68.91242      86  255
1141s dimension(s):
1141s      from  to  offset delta                     refsys point x/y
1141s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1141s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1141s band    1   6      NA    NA                         NA    NA    
1141s > read_stars(c(tif,tif), along = "sensor")
1141s stars object with 4 dimensions and 1 attribute
1141s attribute(s), summary of first 1e+05 cells:
1141s              Min. 1st Qu. Median    Mean 3rd Qu. Max.
1141s L7_ETMs.tif    47      65     76 77.3419      87  255
1141s dimension(s):
1141s        from  to  offset delta                     refsys point x/y
1141s x         1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1141s y         1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1141s band      1   6      NA    NA                         NA    NA    
1141s sensor    1   2      NA    NA                         NA    NA    
1141s > read_stars(c(tif,tif), along = 4)
1141s stars object with 4 dimensions and 1 attribute
1141s attribute(s), summary of first 1e+05 cells:
1141s              Min. 1st Qu. Median    Mean 3rd Qu. Max.
1141s L7_ETMs.tif    47      65     76 77.3419      87  255
1141s dimension(s):
1141s         from  to  offset delta                     refsys point x/y
1141s x          1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1141s y          1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1141s band       1   6      NA    NA                         NA    NA    
1141s new_dim    1   2      NA    NA                         NA    NA    
1141s > read_stars(c(tif,tif), along = "band")
1141s stars object with 3 dimensions and 1 attribute
1141s attribute(s), summary of first 1e+05 cells:
1141s              Min. 1st Qu. Median    Mean 3rd Qu. Max.
1141s L7_ETMs.tif    47      65     76 77.3419      87  255
1141s dimension(s):
1141s      from  to  offset delta                     refsys point x/y
1141s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1141s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1141s band    1  12      NA    NA                         NA    NA    
1141s > read_stars(c(tif,tif), along = 3)
1142s stars object with 3 dimensions and 1 attribute
1142s attribute(s), summary of first 1e+05 cells:
1142s              Min. 1st Qu. Median    Mean 3rd Qu. Max.
1142s L7_ETMs.tif    47      65     76 77.3419      87  255
1142s dimension(s):
1142s      from  to  offset delta                     refsys point x/y
1142s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1142s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1142s band    1  12      NA    NA                         NA    NA    
1142s > 
1142s > # cut:
1142s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1142s > x = read_stars(tif)
1142s > cut(x, c(0, 50, 100, 255))
1142s stars object with 3 dimensions and 1 attribute
1142s attribute(s):
1142s     L7_ETMs.tif    
1142s  (0,50]   :156060  
1142s  (50,100] :503764  
1142s  (100,255]: 77264  
1142s dimension(s):
1142s      from  to  offset delta                     refsys point x/y
1142s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1142s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1142s band    1   6      NA    NA                         NA    NA    
1142s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))
1142s stars object with 2 dimensions and 1 attribute
1142s attribute(s):
1142s     L7_ETMs.tif    
1142s  (0,50]   :     1  
1142s  (50,100] :117134  
1142s  (100,255]:  5713  
1142s dimension(s):
1142s   from  to  offset delta                     refsys point x/y
1142s x    1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1142s y    1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1142s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)))
1142s > 
1142s > st_bbox(st_dimensions(x))
1142s      xmin      ymin      xmax      ymax 
1142s  288776.3 9110728.8  298722.8 9120760.8 
1142s > x[x < 0] = NA
1142s > x[is.na(x)] = 0
1142s > 
1142s > # c:
1142s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata")
1142s > if (FALSE && f != "") {
1142s +   files = c("avhrr-only-v2.19810901.nc",
1142s +   "avhrr-only-v2.19810902.nc",
1142s +   "avhrr-only-v2.19810903.nc",
1142s +   "avhrr-only-v2.19810904.nc",
1142s +   "avhrr-only-v2.19810905.nc",
1142s +   "avhrr-only-v2.19810906.nc",
1142s +   "avhrr-only-v2.19810907.nc",
1142s +   "avhrr-only-v2.19810908.nc",
1142s +   "avhrr-only-v2.19810909.nc")
1142s +   l = list()
1142s +   for (f in files) {
1142s + 	from = system.file(paste0("netcdf/", f), package = "starsdata")
1142s +   	l[[f]] = read_stars(from, sub = c("sst", "anom"))
1142s +   }
1142s +   ret = do.call(c, l)
1142s +   print(ret)
1142s +   ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2)))
1142s +   print(ret)
1142s +   #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times")))
1142s +   #print(ret)
1142s + }
1142s > 
1142s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default
1142s    from to point                                         values
1142s X1    1  1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1
1142s > 
1142s > if (FALSE && require("starsdata", quietly = TRUE)) {
1142s +   # curvilinear:
1142s +   s5p = system.file(
1142s +       "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc",
1142s +       package = "starsdata")
1142s +   print(s5p)
1142s +   lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude")
1142s +   lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude")
1142s +   nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column")
1142s +   lat = read_stars(lat_ds)
1142s +   lon = read_stars(lon_ds)
1142s +   nit = read_stars(nit_ds)
1142s +   nit[[1]][nit[[1]] > 9e+36] = NA
1142s +   
1142s +   ll = setNames(c(lon, lat), c("x", "y"))
1142s +   nit.c = st_as_stars(nit, curvilinear = ll)
1142s +   print(nit.c)
1142s + 
1142s +   s5p = system.file(
1142s +       "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc",
1142s +       package = "starsdata")
1142s +   nit.c2 = read_stars(s5p, 
1142s +   	sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column",
1142s +     curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude"))
1142s +   print(all.equal(nit.c, nit.c2))
1142s + }
1142s > 
1142s BEGIN TEST subset.R
1142s 
1142s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1142s Copyright (C) 2024 The R Foundation for Statistical Computing
1142s Platform: powerpc64le-unknown-linux-gnu
1142s 
1142s R is free software and comes with ABSOLUTELY NO WARRANTY.
1142s You are welcome to redistribute it under certain conditions.
1142s Type 'license()' or 'licence()' for distribution details.
1142s 
1142s R is a collaborative project with many contributors.
1142s Type 'contributors()' for more information and
1142s 'citation()' on how to cite R or R packages in publications.
1142s 
1142s Type 'demo()' for some demos, 'help()' for on-line help, or
1142s 'help.start()' for an HTML browser interface to help.
1142s Type 'q()' to quit R.
1142s 
1143s > suppressPackageStartupMessages(library(stars))
1143s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1143s > x = read_stars(tif)
1143s > y = st_set_dimensions(x, "band", point = TRUE)
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point  values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [y]
1143s band    1  4      NA    NA                         NA  TRUE 1,...,2    
1143s > y = st_set_dimensions(x, "band", point = NA)
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point          values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL [y]
1143s band    1  4      NA    NA                         NA    NA [1,2),...,[2,3)    
1143s > y = st_set_dimensions(x, "band", point = FALSE)
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point          values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE            NULL [y]
1143s band    1  4      NA    NA                         NA FALSE [1,2),...,[2,3)    
1143s > y = st_set_dimensions(x, "band", values = letters[1:6])
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point  values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [y]
1143s band    1  4      NA    NA                         NA    NA a,...,b    
1143s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA)
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point  values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [y]
1143s band    1  4      NA    NA                         NA    NA a,...,b    
1143s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE)
1143s > y[,1:10, 1:10, c(1,4,3,2)]
1143s stars object with 3 dimensions and 1 attribute
1143s attribute(s):
1143s              Min. 1st Qu. Median   Mean 3rd Qu. Max.
1143s L7_ETMs.tif    25      45     57 56.535      64   97
1143s dimension(s):
1143s      from to  offset delta                     refsys point  values x/y
1143s x       1 10  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [x]
1143s y       1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE    NULL [y]
1143s band    1  4      NA    NA                         NA  TRUE a,...,b    
1143s > 
1143s BEGIN TEST testthat.R
1143s 
1143s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1143s Copyright (C) 2024 The R Foundation for Statistical Computing
1143s Platform: powerpc64le-unknown-linux-gnu
1143s 
1143s R is free software and comes with ABSOLUTELY NO WARRANTY.
1143s You are welcome to redistribute it under certain conditions.
1143s Type 'license()' or 'licence()' for distribution details.
1143s 
1143s R is a collaborative project with many contributors.
1143s Type 'contributors()' for more information and
1143s 'citation()' on how to cite R or R packages in publications.
1143s 
1143s Type 'demo()' for some demos, 'help()' for on-line help, or
1143s 'help.start()' for an HTML browser interface to help.
1143s Type 'q()' to quit R.
1143s 
1143s > ## load dependencies
1143s > library(testthat)
1144s > suppressPackageStartupMessages(library(stars))
1144s > 
1144s > ## test package
1144s > test_check("stars")
1152s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ]
1152s 
1152s == Skipped tests (5) ===========================================================
1152s * On CRAN (4): 'test-OpenStreetMap.R:2:3', 'test-ncdf.R:1:1',
1152s   'test-ncproxy.R:1:1', 'test-rectilinear.R:89:3'
1152s * {cubble} is not installed (1): 'test-cubble.R:2:3'
1152s 
1152s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ]
1152s > 
1152s BEGIN TEST tidy.R
1153s 
1153s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1153s Copyright (C) 2024 The R Foundation for Statistical Computing
1153s Platform: powerpc64le-unknown-linux-gnu
1153s 
1153s R is free software and comes with ABSOLUTELY NO WARRANTY.
1153s You are welcome to redistribute it under certain conditions.
1153s Type 'license()' or 'licence()' for distribution details.
1153s 
1153s R is a collaborative project with many contributors.
1153s Type 'contributors()' for more information and
1153s 'citation()' on how to cite R or R packages in publications.
1153s 
1153s Type 'demo()' for some demos, 'help()' for on-line help, or
1153s 'help.start()' for an HTML browser interface to help.
1153s Type 'q()' to quit R.
1153s 
1153s > suppressPackageStartupMessages(library(stars))
1153s > 
1153s > if (require(dplyr, quietly = TRUE)) {
1153s + tif = system.file("tif/L7_ETMs.tif", package = "stars")
1153s + x <- read_stars(tif)
1153s + (y <- x %>% select(L7_ETMs.tif))
1153s + (y <- x %>% filter(band > 2))
1153s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif))
1153s + x %>% pull(L7_ETMs.tif) %>% class()
1153s + x %>% filter(x > 289900)
1153s + x %>% slice("x", 50:100)
1153s + 
1153s + suppressPackageStartupMessages(library(ggplot2))
1153s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band)
1153s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) +
1153s + 	coord_equal()
1153s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band)
1153s + 
1153s + 
1153s + # see https://github.com/r-spatial/stars/issues/539 :
1153s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars"))
1153s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units
1153s + 
1153s + x - slice(x, 'band', 1) # runs as expected, recycling the second object
1153s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless
1153s + try(x - slice(y, 'band', 1)) # fails as expected 
1153s + y - slice(y, 'band', 1) # runs as expected
1153s + }
1154s 
1154s Attaching package: 'dplyr'
1154s 
1154s The following objects are masked from 'package:stats':
1154s 
1154s     filter, lag
1154s 
1154s The following objects are masked from 'package:base':
1154s 
1154s     intersect, setdiff, setequal, union
1154s 
1154s Error in Ops.units(X[[i]], ...) : 
1154s   both operands of the expression should be "units" objects
1154s Error in Ops.units(X[[i]], ...) : 
1154s   both operands of the expression should be "units" objects
1154s stars object with 3 dimensions and 1 attribute
1154s attribute(s):
1154s                              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1154s L7_ETMs.tif [degree_Celsius] -184     -19     -8 -10.2353       0  131
1154s dimension(s):
1154s      from  to  offset delta                     refsys point x/y
1154s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1154s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1154s band    1   6      NA    NA                         NA    NA    
1154s > 
1154s BEGIN TEST transform.R
1154s 
1154s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1154s Copyright (C) 2024 The R Foundation for Statistical Computing
1154s Platform: powerpc64le-unknown-linux-gnu
1154s 
1154s R is free software and comes with ABSOLUTELY NO WARRANTY.
1154s You are welcome to redistribute it under certain conditions.
1154s Type 'license()' or 'licence()' for distribution details.
1154s 
1154s R is a collaborative project with many contributors.
1154s Type 'contributors()' for more information and
1154s 'citation()' on how to cite R or R packages in publications.
1154s 
1154s Type 'demo()' for some demos, 'help()' for on-line help, or
1154s 'help.start()' for an HTML browser interface to help.
1154s Type 'q()' to quit R.
1154s 
1154s > suppressPackageStartupMessages(library(stars))
1155s > #suppressPackageStartupMessages(library(lwgeom))
1155s > geomatrix = system.file("tif/geomatrix.tif", package = "stars")
1155s > (x = read_stars(geomatrix))
1155s stars object with 2 dimensions and 1 attribute
1155s attribute(s):
1155s                Min. 1st Qu. Median    Mean 3rd Qu. Max.
1155s geomatrix.tif    74     107    123 126.765     132  255
1155s dimension(s):
1155s   from to  offset delta                refsys point x/y
1155s x    1 20 1841002   1.5 WGS 84 / UTM zone 11N  TRUE [x]
1155s y    1 20 1144003  -1.5 WGS 84 / UTM zone 11N  TRUE [y]
1155s sheared raster with parameters: -5 -5 
1155s > new = st_crs(4326)
1155s > y = st_transform(x, new)
1155s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red')
1155s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE)
1155s > image(y, add = TRUE)
1155s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE)
1155s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE)
1155s > 
1155s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1155s > x = read_stars(tif)[,1:10,1:10,1:3]
1155s > x_ = st_transform(x, st_crs(4326))
1155s > ## IGNORE_RDIFF_BEGIN
1155s > if (require(lwgeom, quietly = TRUE)) {
1155s +   x__ = st_transform_proj(x, st_crs(4326)$proj4string)
1155s +   st_crs(x_) = st_crs(x__)
1155s +   print(all.equal(x_,x__))
1155s + 
1155s + # x__ = st_transform(x, x_) #now in st_warp 
1155s + # all.equal(x_, x__)
1155s + 
1155s +   x = st_xy2sfc(x, as_points = FALSE)
1155s +   (x_ = st_transform(x, st_crs(4326)))
1155s +   (x__ = st_transform_proj(x, st_crs(4326)))
1155s +   print(all.equal(x_,x__,check.attributes = FALSE))
1155s + }
1155s Linking to liblwgeom 3.0.0beta1 r16016, GEOS 3.13.0, PROJ 9.5.1
1155s 
1155s Attaching package: 'lwgeom'
1155s 
1155s The following object is masked from 'package:sf':
1155s 
1155s     st_perimeter
1155s 
1155s [1] TRUE
1155s [1] TRUE
1155s > ## IGNORE_RDIFF_END
1155s > 
1155s > # nothing to transform: now errs:
1155s > try(st_transform(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326)))
1155s > try(st_transform_proj(st_as_stars(list(m = matrix(1,10,10))), st_crs(4326)))
1155s > 
1155s Error in st_transform.stars(st_as_stars(list(m = matrix(1, 10, 10))),  : 
1155s   !is.na(st_crs(x)) is not TRUE
1155s Error in st_transform_proj.stars(st_as_stars(list(m = matrix(1, 10, 10))),  : 
1155s   !is.na(st_crs(x)) is not TRUE
1155s BEGIN TEST warp.R
1155s 
1155s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1155s Copyright (C) 2024 The R Foundation for Statistical Computing
1155s Platform: powerpc64le-unknown-linux-gnu
1155s 
1155s R is free software and comes with ABSOLUTELY NO WARRANTY.
1155s You are welcome to redistribute it under certain conditions.
1155s Type 'license()' or 'licence()' for distribution details.
1155s 
1155s R is a collaborative project with many contributors.
1155s Type 'contributors()' for more information and
1155s 'citation()' on how to cite R or R packages in publications.
1155s 
1155s Type 'demo()' for some demos, 'help()' for on-line help, or
1155s 'help.start()' for an HTML browser interface to help.
1155s Type 'q()' to quit R.
1155s 
1155s > suppressPackageStartupMessages(library(stars))
1156s > geomatrix = system.file("tif/geomatrix.tif", package = "stars")
1156s > x = read_stars(geomatrix)
1156s > # can stars reproduce what gdal does, by default?
1156s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999)
1156s > y = st_warp(x, x2)
1156s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) }
1156s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) }
1156s > names(x2) = names(y)
1156s > all.equal(x2, y) # yes?
1156s [1] TRUE
1156s > 
1156s > # does gdal reproduce with stars template object?
1156s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif"))
1156s stars object with 2 dimensions and 1 attribute
1156s attribute(s):
1156s           Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1156s file.tif    74     115    123 126.4289     132  255  224
1156s dimension(s):
1156s   from to  offset delta                refsys point x/y
1156s x    1 25 1840902  5.22 WGS 84 / UTM zone 11N FALSE [x]
1156s y    1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y]
1156s > 
1156s > # does gdal reproduce what stars does, default cell size?
1156s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE))
1156s stars object with 2 dimensions and 1 attribute
1156s attribute(s):
1156s                Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1156s geomatrix.tif    74     115    123 126.4289     132  255  224
1156s dimension(s):
1156s   from to  offset delta                refsys x/y
1156s x    1 25 1840902  5.22 WGS 84 / UTM zone 11N [x]
1156s y    1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y]
1156s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif"))
1156s stars object with 2 dimensions and 1 attribute
1156s attribute(s):
1156s           Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1156s file.tif    74     115    123 126.4289     132  255  224
1156s dimension(s):
1156s   from to  offset delta                refsys point x/y
1156s x    1 25 1840902  5.22 WGS 84 / UTM zone 11N FALSE [x]
1156s y    1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y]
1156s > 
1156s > # try with multiple bands:
1156s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1156s > (x1 = read_stars(tif))
1156s stars object with 3 dimensions and 1 attribute
1156s attribute(s):
1157s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1157s L7_ETMs.tif     1      54     69 68.91242      86  255
1157s dimension(s):
1157s      from  to  offset delta                     refsys point x/y
1157s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1157s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1157s band    1   6      NA    NA                         NA    NA    
1157s > tifcp = tempfile(fileext = ".tif")
1157s > file.copy(tif, tifcp)
1157s [1] TRUE
1157s > x1p = read_stars(tifcp, proxy = TRUE)
1157s > st_dimensions(x1p)
1157s      from  to  offset delta                     refsys point x/y
1157s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1157s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1157s band    1   6      NA    NA                         NA    NA    
1157s > (x1a = st_warp(x1, crs = st_crs(4326)))
1157s stars object with 3 dimensions and 1 attribute
1157s attribute(s):
1157s              Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1157s L7_ETMs.tif     1      54     69 68.93072      86  255 8778
1157s dimension(s):
1157s      from  to offset      delta refsys x/y
1157s x       1 350 -34.92  0.0002592 WGS 84 [x]
1157s y       1 352  -7.95 -0.0002592 WGS 84 [y]
1157s band    1   6     NA         NA     NA    
1157s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif"))
1157s stars object with 3 dimensions and 1 attribute
1157s attribute(s):
1157s           Min. 1st Qu. Median     Mean 3rd Qu. Max.
1157s file.tif     1      54     69 68.91242      86  255
1157s dimension(s):
1157s      from  to  offset delta                     refsys point x/y
1157s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1157s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1157s band    1   6      NA    NA                         NA    NA    
1157s > 
1157s > # does gdal reproduce what stars does? Smaller grid:
1157s > x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3)
1157s > # x2 = x2[,2:43,2:43]
1157s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) }
1157s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') }
1157s > ### doesn't work: FIXME: check with more recent GDAL:
1157s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif"))
1157s stars object with 2 dimensions and 1 attribute
1157s attribute(s):
1157s           Min. 1st Qu. Median     Mean 3rd Qu. Max. NA's
1157s file.tif    74     107    123 126.6584     132  255  727
1157s dimension(s):
1157s   from to  offset delta                refsys point x/y
1157s x    1 44 1840902     3 WGS 84 / UTM zone 11N FALSE [x]
1157s y    1 44 1144003    -3 WGS 84 / UTM zone 11N FALSE [y]
1157s > if (interactive()) { plot(y, breaks = "equal") }
1157s > names(x2) = names(y)
1157s > # isTRUE(all.equal(x2, y, check.attributes=FALSE))
1157s > m = mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE)
1157s > u = unique(as.vector(x2[[1]]-y[[1]]))
1157s > 
1157s > g = st_as_stars()
1157s > attr(g, "dimensions")$x$offset = 0
1157s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360)))
1157s > if (interactive()) { plot(g, axes=TRUE) }
1157s > a = st_warp(g, st_as_stars(), use_gdal=FALSE)
1157s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1)
1157s > all.equal(a, b, check.attributes = FALSE)
1157s [1] TRUE
1157s > 
1157s BEGIN TEST write.R
1157s 
1157s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1157s Copyright (C) 2024 The R Foundation for Statistical Computing
1157s Platform: powerpc64le-unknown-linux-gnu
1157s 
1157s R is free software and comes with ABSOLUTELY NO WARRANTY.
1157s You are welcome to redistribute it under certain conditions.
1157s Type 'license()' or 'licence()' for distribution details.
1157s 
1157s R is a collaborative project with many contributors.
1157s Type 'contributors()' for more information and
1157s 'citation()' on how to cite R or R packages in publications.
1157s 
1157s Type 'demo()' for some demos, 'help()' for on-line help, or
1157s 'help.start()' for an HTML browser interface to help.
1157s Type 'q()' to quit R.
1157s 
1157s > suppressPackageStartupMessages(library(stars))
1158s > 
1158s > tif = system.file("tif/L7_ETMs.tif", package = "stars")
1158s > (x = read_stars(tif))
1158s stars object with 3 dimensions and 1 attribute
1158s attribute(s):
1158s              Min. 1st Qu. Median     Mean 3rd Qu. Max.
1158s L7_ETMs.tif     1      54     69 68.91242      86  255
1158s dimension(s):
1158s      from  to  offset delta                     refsys point x/y
1158s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1158s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1158s band    1   6      NA    NA                         NA    NA    
1158s > 
1158s > # write stars object:
1158s > write_stars(x, tempfile(), driver = "GTiff")
1158s > 
1158s > # write stars_proxy object:
1158s > (x = read_stars(tif, proxy = TRUE))
1158s stars_proxy object with 1 attribute in 1 file(s):
1158s $L7_ETMs.tif
1158s [1] "[...]/L7_ETMs.tif"
1158s 
1158s dimension(s):
1158s      from  to  offset delta                     refsys point x/y
1158s x       1 349  288776  28.5 SIRGAS 2000 / UTM zone 25S FALSE [x]
1158s y       1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y]
1158s band    1   6      NA    NA                         NA    NA    
1158s > write_stars(x, tempfile(), driver = "GTiff")
1159s 
1159s > 
1159s autopkgtest [10:29:40]: test run-unit-test: -----------------------]
1160s run-unit-test        PASS
1160s autopkgtest [10:29:41]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
1160s autopkgtest [10:29:41]: test pkg-r-autopkgtest: preparing testbed
1269s autopkgtest [10:31:30]: testbed dpkg architecture: ppc64el
1269s autopkgtest [10:31:30]: testbed apt version: 2.9.18
1269s autopkgtest [10:31:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup
1269s autopkgtest [10:31:30]: testbed release detected to be: plucky
1270s autopkgtest [10:31:31]: updating testbed package index (apt update)
1271s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB]
1271s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
1271s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
1271s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
1271s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [908 kB]
1271s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [79.8 kB]
1271s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.6 kB]
1271s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [115 kB]
1271s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [839 kB]
1271s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [4628 B]
1272s Fetched 2074 kB in 1s (1654 kB/s)
1273s Reading package lists...
1273s + lsb_release --codename --short
1273s + RELEASE=plucky
1273s + cat
1273s + [ plucky != trusty ]
1273s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
1273s Reading package lists...
1274s Building dependency tree...
1274s Reading state information...
1274s Calculating upgrade...
1274s The following packages will be upgraded:
1274s   python-babel-localedata python3-babel wireless-regdb
1274s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1274s Need to get 6786 kB of archives.
1274s After this operation, 1883 kB of additional disk space will be used.
1274s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-babel all 2.17.0-1 [101 kB]
1275s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el python-babel-localedata all 2.17.0-1 [6678 kB]
1275s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el wireless-regdb all 2024.10.07-0ubuntu1 [7214 B]
1275s Fetched 6786 kB in 1s (7981 kB/s)
1276s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 106260 files and directories currently installed.)
1276s Preparing to unpack .../python3-babel_2.17.0-1_all.deb ...
1276s /usr/bin/py3clean:101: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead.
1276s   for fn in glob1(directory, "%s.*" % fname):
1276s Unpacking python3-babel (2.17.0-1) over (2.16.0-1) ...
1276s Preparing to unpack .../python-babel-localedata_2.17.0-1_all.deb ...
1276s Unpacking python-babel-localedata (2.17.0-1) over (2.16.0-1) ...
1277s Preparing to unpack .../wireless-regdb_2024.10.07-0ubuntu1_all.deb ...
1277s Unpacking wireless-regdb (2024.10.07-0ubuntu1) over (2024.07.04-0ubuntu1) ...
1277s Setting up wireless-regdb (2024.10.07-0ubuntu1) ...
1277s Setting up python-babel-localedata (2.17.0-1) ...
1277s Setting up python3-babel (2.17.0-1) ...
1277s Processing triggers for man-db (2.13.0-1) ...
1278s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
1278s + /usr/lib/apt/apt-helper analyze-pattern ?true
1278s + uname -r
1278s + sed s/\./\\./g
1278s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.*
1278s + apt list ?obsolete
1278s + tail -n+2
1278s + cut -d/ -f1
1278s + grep -v ^linux-.*6\.12\.0-12-generic.*
1278s + true
1278s + obsolete_pkgs=
1278s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove
1278s Reading package lists...
1278s Building dependency tree...
1278s Reading state information...
1278s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1278s + grep -q trusty /etc/lsb-release
1278s + [ ! -d /usr/share/doc/unattended-upgrades ]
1278s + [ ! -d /usr/share/doc/lxd ]
1278s + [ ! -d /usr/share/doc/lxd-client ]
1278s + [ ! -d /usr/share/doc/snapd ]
1278s + type iptables
1278s + cat
1278s + chmod 755 /etc/rc.local
1278s + . /etc/rc.local
1278s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
1278s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
1278s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
1278s + uname -m
1278s + [ ppc64le = ppc64le ]
1278s + systemctl is-active keyboard-setup.service
1278s + [ active = failed ]
1278s + [ -d /run/systemd/system ]
1278s + systemd-detect-virt --quiet --vm
1278s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
1278s + cat
1278s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
1278s + echo COMPRESS=lz4
1278s autopkgtest [10:31:39]: upgrading testbed (apt dist-upgrade and autopurge)
1279s Reading package lists...
1279s Building dependency tree...
1279s Reading state information...
1279s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
1279s Starting 2 pkgProblemResolver with broken count: 0
1279s Done
1280s Entering ResolveByKeep
1280s 
1280s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1280s Reading package lists...
1281s Building dependency tree...
1281s Reading state information...
1281s Starting pkgProblemResolver with broken count: 0
1281s Starting 2 pkgProblemResolver with broken count: 0
1281s Done
1281s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1284s Reading package lists...
1285s Building dependency tree...
1285s Reading state information...
1285s Starting pkgProblemResolver with broken count: 0
1285s Starting 2 pkgProblemResolver with broken count: 0
1285s Done
1285s The following NEW packages will be installed:
1285s   build-essential cpp cpp-14 cpp-14-powerpc64le-linux-gnu
1285s   cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config
1285s   fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome
1285s   fonts-glyphicons-halflings fonts-mathjax g++ g++-14
1285s   g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-14
1285s   gcc-14-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gdal-data
1285s   gdal-plugins gfortran gfortran-14 gfortran-14-powerpc64le-linux-gnu
1285s   gfortran-powerpc64le-linux-gnu icu-devtools javascript-common
1285s   libabsl20230802 libaec0 libaom3 libarmadillo14 libarpack2t64 libasan8
1285s   libavif16 libblas-dev libblas3 libblosc1 libbz2-dev libcairo2 libcc1-0
1285s   libcfitsio10t64 libdatrie1 libdav1d7 libde265-0 libdeflate-dev libdeflate0
1285s   libfontconfig1 libfreexl1 libfyba0t64 libgav1-1 libgcc-14-dev libgdal36
1285s   libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgfortran5
1285s   libgif7 libgomp1 libgpgmepp6t64 libgraphite2-3 libharfbuzz0b libhdf4-0-alt
1285s   libhdf5-310 libhdf5-hl-310 libheif-plugin-aomdec libheif-plugin-libde265
1285s   libheif1 libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
1285s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
1285s   libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
1285s   libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
1285s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
1285s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
1285s   libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack-dev liblapack3
1285s   liblcms2-2 liblerc4 liblsan0 libltdl7 liblua5.4-0 liblzma-dev libminizip1t64
1285s   libmpc3 libmysqlclient24 libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2
1285s   libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
1285s   libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
1285s   libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpoppler145 libpq5
1285s   libproj25 libqhull-r8.0 libquadmath0 librav1e0.7 libreadline-dev librttopo1
1285s   libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 libstdc++-14-dev
1285s   libsvtav1enc2 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev
1285s   libtk8.6 libtsan2 libubsan1 libudunits2-0 libudunits2-data liburiparser1
1285s   libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1
1285s   libxss1 libxt6t64 libyuv0 littler mysql-common node-bootstrap-sass
1285s   node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest
1285s   pkgconf pkgconf-bin proj-data r-base-core r-base-dev r-cran-abind
1285s   r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio
1285s   r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-class
1285s   r-cran-classint r-cran-cli r-cran-clue r-cran-cluster r-cran-codetools
1285s   r-cran-collapse r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11
1285s   r-cran-crayon r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc
1285s   r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate
1285s   r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome
1285s   r-cran-formula r-cran-fs r-cran-future r-cran-future.apply r-cran-generics
1285s   r-cran-ggforce r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue
1285s   r-cran-goftest r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools
1285s   r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib
1285s   r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later
1285s   r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv
1285s   r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata
1285s   r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise
1285s   r-cran-mgcv r-cran-mime r-cran-misctools r-cran-munsell r-cran-ncdfgeom
1285s   r-cran-ncmeta r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply
1285s   r-cran-pcict r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten
1285s   r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx
1285s   r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6
1285s   r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils
1285s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack r-cran-rex
1285s   r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot
1285s   r-cran-s2 r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-shiny
1285s   r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat
1285s   r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom
1285s   r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random
1285s   r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi
1285s   r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor
1285s   r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect
1285s   r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs
1285s   r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk
1285s   r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common
1285s   unzip x11-common xdg-utils zip zlib1g-dev
1286s 0 upgraded, 342 newly installed, 0 to remove and 0 not upgraded.
1286s Need to get 394 MB of archives.
1286s After this operation, 1236 MB of additional disk space will be used.
1286s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el libisl23 ppc64el 0.27-1 [882 kB]
1286s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libmpc3 ppc64el 1.3.1-1build2 [62.1 kB]
1286s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14-powerpc64le-linux-gnu ppc64el 14.2.0-13ubuntu1 [10.5 MB]
1287s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14 ppc64el 14.2.0-13ubuntu1 [1036 B]
1287s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [5456 B]
1287s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp ppc64el 4:14.1.0-2ubuntu1 [22.5 kB]
1287s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcc1-0 ppc64el 14.2.0-13ubuntu1 [48.1 kB]
1287s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-13ubuntu1 [161 kB]
1287s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el libitm1 ppc64el 14.2.0-13ubuntu1 [32.2 kB]
1287s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libasan8 ppc64el 14.2.0-13ubuntu1 [2945 kB]
1287s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblsan0 ppc64el 14.2.0-13ubuntu1 [1322 kB]
1287s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtsan2 ppc64el 14.2.0-13ubuntu1 [2695 kB]
1287s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el libubsan1 ppc64el 14.2.0-13ubuntu1 [1191 kB]
1287s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libquadmath0 ppc64el 14.2.0-13ubuntu1 [158 kB]
1287s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgcc-14-dev ppc64el 14.2.0-13ubuntu1 [1620 kB]
1287s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14-powerpc64le-linux-gnu ppc64el 14.2.0-13ubuntu1 [20.6 MB]
1288s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14 ppc64el 14.2.0-13ubuntu1 [534 kB]
1288s Get:18 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [1222 B]
1288s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc ppc64el 4:14.1.0-2ubuntu1 [5006 B]
1288s Get:20 http://ftpmaster.internal/ubuntu plucky/main ppc64el libstdc++-14-dev ppc64el 14.2.0-13ubuntu1 [2677 kB]
1289s Get:21 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14-powerpc64le-linux-gnu ppc64el 14.2.0-13ubuntu1 [12.0 MB]
1289s Get:22 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14 ppc64el 14.2.0-13ubuntu1 [21.1 kB]
1289s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [968 B]
1289s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++ ppc64el 4:14.1.0-2ubuntu1 [1090 B]
1289s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B]
1289s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el dctrl-tools ppc64el 2.24-3build3 [109 kB]
1289s Get:27 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB]
1289s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB]
1289s Get:29 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig-config ppc64el 2.15.0-1.1ubuntu2 [37.4 kB]
1289s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfontconfig1 ppc64el 2.15.0-1.1ubuntu2 [190 kB]
1289s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB]
1289s Get:32 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
1289s Get:33 http://ftpmaster.internal/ubuntu plucky/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
1289s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
1290s Get:35 http://ftpmaster.internal/ubuntu plucky/universe ppc64el gdal-data all 3.10.1+dfsg-1build2 [269 kB]
1290s Get:36 http://ftpmaster.internal/ubuntu plucky/universe ppc64el gdal-plugins ppc64el 3.10.1+dfsg-1build2 [25.6 kB]
1290s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-13ubuntu1 [571 kB]
1290s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran-14-dev ppc64el 14.2.0-13ubuntu1 [621 kB]
1290s Get:39 http://ftpmaster.internal/ubuntu plucky/main ppc64el gfortran-14-powerpc64le-linux-gnu ppc64el 14.2.0-13ubuntu1 [11.3 MB]
1290s Get:40 http://ftpmaster.internal/ubuntu plucky/main ppc64el gfortran-14 ppc64el 14.2.0-13ubuntu1 [13.2 kB]
1290s Get:41 http://ftpmaster.internal/ubuntu plucky/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [1024 B]
1290s Get:42 http://ftpmaster.internal/ubuntu plucky/main ppc64el gfortran ppc64el 4:14.1.0-2ubuntu1 [1168 B]
1290s Get:43 http://ftpmaster.internal/ubuntu plucky/main ppc64el icu-devtools ppc64el 76.1-1ubuntu2 [251 kB]
1290s Get:44 http://ftpmaster.internal/ubuntu plucky/main ppc64el javascript-common all 11+nmu1 [5936 B]
1290s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el libabsl20230802 ppc64el 20230802.1-4ubuntu2 [605 kB]
1290s Get:46 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB]
1290s Get:47 http://ftpmaster.internal/ubuntu plucky/main ppc64el libaom3 ppc64el 3.11.0-1 [3022 kB]
1291s Get:48 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-4 [222 kB]
1291s Get:49 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-4 [2814 kB]
1291s Get:50 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libarpack2t64 ppc64el 3.9.1-4 [107 kB]
1291s Get:51 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libarmadillo14 ppc64el 1:14.2.1+dfsg-1 [109 kB]
1291s Get:52 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libdav1d7 ppc64el 1.5.1-1 [589 kB]
1291s Get:53 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgav1-1 ppc64el 0.19.0-3 [932 kB]
1291s Get:54 http://ftpmaster.internal/ubuntu plucky/universe ppc64el librav1e0.7 ppc64el 0.7.1-9 [799 kB]
1291s Get:55 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsvtav1enc2 ppc64el 2.3.0+dfsg-1 [1575 kB]
1291s Get:56 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-3ubuntu2 [215 kB]
1291s Get:57 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B]
1291s Get:58 http://ftpmaster.internal/ubuntu plucky/main ppc64el libyuv0 ppc64el 0.0.1899.20250103-1 [273 kB]
1291s Get:59 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libavif16 ppc64el 1.1.1-1ubuntu1 [130 kB]
1291s Get:60 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas-dev ppc64el 3.12.0-4 [289 kB]
1291s Get:61 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsnappy1v5 ppc64el 1.2.1-1 [33.4 kB]
1291s Get:62 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libblosc1 ppc64el 1.21.5+ds-1build1 [38.5 kB]
1291s Get:63 http://ftpmaster.internal/ubuntu plucky/main ppc64el libbz2-dev ppc64el 1.0.8-6 [50.2 kB]
1291s Get:64 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpixman-1-0 ppc64el 0.44.0-3 [334 kB]
1291s Get:65 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB]
1291s Get:66 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B]
1291s Get:67 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB]
1291s Get:68 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcairo2 ppc64el 1.18.2-2 [747 kB]
1291s Get:69 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libcfitsio10t64 ppc64el 4.5.0-5 [710 kB]
1291s Get:70 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdatrie1 ppc64el 0.2.13-3build1 [22.7 kB]
1291s Get:71 http://ftpmaster.internal/ubuntu plucky/main ppc64el libde265-0 ppc64el 1.0.15-1build4 [284 kB]
1291s Get:72 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdeflate0 ppc64el 1.23-1 [63.4 kB]
1291s Get:73 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdeflate-dev ppc64el 1.23-1 [70.8 kB]
1291s Get:74 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libfyba0t64 ppc64el 4.1.1-11build1 [148 kB]
1291s Get:75 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libminizip1t64 ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu1 [25.6 kB]
1291s Get:76 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libfreexl1 ppc64el 2.0.0-1build2 [53.1 kB]
1291s Get:77 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeos3.13.0 ppc64el 3.13.0-1 [1082 kB]
1291s Get:78 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeos-c1t64 ppc64el 3.13.0-1 [107 kB]
1291s Get:79 http://ftpmaster.internal/ubuntu plucky/universe ppc64el proj-data all 9.5.1-1 [7924 kB]
1292s Get:80 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB]
1292s Get:81 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB]
1292s Get:82 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB]
1292s Get:83 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB]
1292s Get:84 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtiff6 ppc64el 4.5.1+git230720-4ubuntu4 [272 kB]
1292s Get:85 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libproj25 ppc64el 9.5.1-1 [1517 kB]
1292s Get:86 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgeotiff5 ppc64el 1.7.3-1 [65.2 kB]
1292s Get:87 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgif7 ppc64el 5.2.2-1ubuntu1 [41.2 kB]
1292s Get:88 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B]
1292s Get:89 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf4-0-alt ppc64el 4.3.0-1 [337 kB]
1292s Get:90 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-3 [1523 kB]
1292s Get:91 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif-plugin-aomdec ppc64el 1.19.5-1build1 [11.7 kB]
1292s Get:92 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif-plugin-libde265 ppc64el 1.19.5-1build1 [9188 B]
1292s Get:93 http://ftpmaster.internal/ubuntu plucky/main ppc64el libheif1 ppc64el 1.19.5-1build1 [452 kB]
1292s Get:94 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liburiparser1 ppc64el 0.9.8+dfsg-2 [52.7 kB]
1292s Get:95 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmlbase1t64 ppc64el 1.3.0-12build1 [59.5 kB]
1292s Get:96 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmldom1t64 ppc64el 1.3.0-12build1 [168 kB]
1292s Get:97 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libkmlengine1t64 ppc64el 1.3.0-12build1 [78.0 kB]
1292s Get:98 http://ftpmaster.internal/ubuntu plucky/main ppc64el mysql-common all 5.8+1.1.1 [6800 B]
1292s Get:99 http://ftpmaster.internal/ubuntu plucky/main ppc64el libmysqlclient24 ppc64el 8.4.4-0ubuntu1 [1295 kB]
1292s Get:100 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-3 [74.9 kB]
1292s Get:101 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libnetcdf19t64 ppc64el 1:4.9.2-6ubuntu2 [599 kB]
1292s Get:102 http://ftpmaster.internal/ubuntu plucky/main ppc64el libltdl7 ppc64el 2.5.4-2.1 [50.2 kB]
1292s Get:103 http://ftpmaster.internal/ubuntu plucky/main ppc64el libodbc2 ppc64el 2.3.12-2ubuntu1 [189 kB]
1293s Get:104 http://ftpmaster.internal/ubuntu plucky/main ppc64el unixodbc-common all 2.3.12-2ubuntu1 [9044 B]
1293s Get:105 http://ftpmaster.internal/ubuntu plucky/main ppc64el libodbcinst2 ppc64el 2.3.12-2ubuntu1 [37.3 kB]
1293s Get:106 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libogdi4.1 ppc64el 4.1.1+ds-5 [257 kB]
1293s Get:107 http://ftpmaster.internal/ubuntu plucky/main ppc64el libopenjp2-7 ppc64el 2.5.0-2ubuntu3 [247 kB]
1293s Get:108 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgpgmepp6t64 ppc64el 1.24.1-2ubuntu1 [134 kB]
1293s Get:109 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB]
1293s Get:110 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpoppler145 ppc64el 25.01.0-2 [1397 kB]
1293s Get:111 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpq5 ppc64el 17.2-1build2 [173 kB]
1293s Get:112 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB]
1293s Get:113 http://ftpmaster.internal/ubuntu plucky/universe ppc64el librttopo1 ppc64el 1.1.0-3build2 [240 kB]
1293s Get:114 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libspatialite8t64 ppc64el 5.1.0-3build1 [2233 kB]
1293s Get:115 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libxerces-c3.2t64 ppc64el 3.2.4+debian-1.3build1 [1065 kB]
1293s Get:116 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libgdal36 ppc64el 3.10.1+dfsg-1build2 [10.6 MB]
1294s Get:117 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB]
1294s Get:118 http://ftpmaster.internal/ubuntu plucky/main ppc64el libharfbuzz0b ppc64el 10.2.0-1 [598 kB]
1294s Get:119 http://ftpmaster.internal/ubuntu plucky/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB]
1294s Get:120 http://ftpmaster.internal/ubuntu plucky/main ppc64el libice6 ppc64el 2:1.1.1-1 [49.9 kB]
1294s Get:121 http://ftpmaster.internal/ubuntu plucky/main ppc64el libicu-dev ppc64el 76.1-1ubuntu2 [12.9 MB]
1294s Get:122 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-3ubuntu2 [358 kB]
1294s Get:123 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B]
1294s Get:124 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B]
1294s Get:125 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
1294s Get:126 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
1294s Get:127 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
1294s Get:128 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB]
1294s Get:129 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB]
1294s Get:130 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
1294s Get:131 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
1294s Get:132 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
1294s Get:133 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
1294s Get:134 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
1294s Get:135 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
1294s Get:136 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
1294s Get:137 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
1294s Get:138 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
1294s Get:139 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack-dev ppc64el 3.12.0-4 [6076 kB]
1294s Get:140 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblua5.4-0 ppc64el 5.4.7-1 [211 kB]
1294s Get:141 http://ftpmaster.internal/ubuntu plucky/main ppc64el libncurses-dev ppc64el 6.5-2 [480 kB]
1294s Get:142 http://ftpmaster.internal/ubuntu plucky/main ppc64el libthai-data all 0.1.29-2build1 [158 kB]
1294s Get:143 http://ftpmaster.internal/ubuntu plucky/main ppc64el libthai0 ppc64el 0.1.29-2build1 [21.8 kB]
1294s Get:144 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpango-1.0-0 ppc64el 1.56.1-1 [277 kB]
1294s Get:145 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpangoft2-1.0-0 ppc64el 1.56.1-1 [58.6 kB]
1294s Get:146 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpangocairo-1.0-0 ppc64el 1.56.1-1 [30.6 kB]
1294s Get:147 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpaper2 ppc64el 2.2.5-0.3 [18.0 kB]
1294s Get:148 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpaper-utils ppc64el 2.2.5-0.3 [15.6 kB]
1295s Get:149 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu3 [254 kB]
1295s Get:150 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu3 [238 kB]
1295s Get:151 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu3 [7108 B]
1295s Get:152 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu3 [817 kB]
1295s Get:153 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpkgconf3 ppc64el 1.8.1-4 [37.1 kB]
1295s Get:154 http://ftpmaster.internal/ubuntu plucky/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu1 [902 kB]
1295s Get:155 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpng-dev ppc64el 1.6.44-3 [325 kB]
1295s Get:156 http://ftpmaster.internal/ubuntu plucky/main ppc64el libreadline-dev ppc64el 8.2-6 [230 kB]
1295s Get:157 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsm6 ppc64el 2:1.2.4-1 [18.4 kB]
1295s Get:158 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtcl8.6 ppc64el 8.6.16+dfsg-1 [1201 kB]
1295s Get:159 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB]
1295s Get:160 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B]
1295s Get:161 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtk8.6 ppc64el 8.6.16-1 [946 kB]
1295s Get:162 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libudunits2-data all 2.2.28-7build1 [19.4 kB]
1295s Get:163 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libudunits2-0 ppc64el 2.2.28-7build1 [67.5 kB]
1295s Get:164 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.2build1 [202 kB]
1295s Get:165 http://ftpmaster.internal/ubuntu plucky/main ppc64el zip ppc64el 3.0-14ubuntu2 [196 kB]
1295s Get:166 http://ftpmaster.internal/ubuntu plucky/main ppc64el unzip ppc64el 6.0-28ubuntu6 [200 kB]
1295s Get:167 http://ftpmaster.internal/ubuntu plucky/main ppc64el xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
1295s Get:168 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-base-core ppc64el 4.4.2-1build1 [28.9 MB]
1296s Get:169 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-littler ppc64el 0.3.20-2 [97.3 kB]
1296s Get:170 http://ftpmaster.internal/ubuntu plucky/universe ppc64el littler all 0.3.20-2 [2554 B]
1296s Get:171 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB]
1296s Get:172 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
1296s Get:173 http://ftpmaster.internal/ubuntu plucky/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB]
1296s Get:174 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pandoc-data all 3.1.11.1-3build1 [78.8 kB]
1296s Get:175 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pandoc ppc64el 3.1.11.1+ds-2 [30.4 MB]
1298s Get:176 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblzma-dev ppc64el 5.6.3-1 [208 kB]
1298s Get:177 http://ftpmaster.internal/ubuntu plucky/main ppc64el pkgconf-bin ppc64el 1.8.1-4 [22.5 kB]
1298s Get:178 http://ftpmaster.internal/ubuntu plucky/main ppc64el pkgconf ppc64el 1.8.1-4 [16.7 kB]
1298s Get:179 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1.3 [223 kB]
1298s Get:180 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-base-dev all 4.4.2-1build1 [4342 B]
1298s Get:181 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
1298s Get:182 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-abind all 1.4-8-1 [66.9 kB]
1298s Get:183 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cli ppc64el 3.6.3-1 [1373 kB]
1298s Get:184 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB]
1298s Get:185 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-glue ppc64el 1.8.0-1 [165 kB]
1298s Get:186 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rlang ppc64el 1.1.5-1 [1740 kB]
1298s Get:187 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
1298s Get:188 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB]
1298s Get:189 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB]
1298s Get:190 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB]
1298s Get:191 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
1298s Get:192 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB]
1298s Get:193 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB]
1298s Get:194 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
1298s Get:195 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-3 [420 kB]
1298s Get:196 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-withr all 3.0.2+dfsg-1 [214 kB]
1298s Get:197 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tidyselect ppc64el 1.2.1+dfsg-1 [222 kB]
1298s Get:198 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-dplyr ppc64el 1.1.4-4 [1542 kB]
1298s Get:199 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB]
1298s Get:200 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mass ppc64el 7.3-64-1 [1117 kB]
1298s Get:201 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-class ppc64el 7.3-23-1 [94.5 kB]
1298s Get:202 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-proxy ppc64el 0.4-27-1 [185 kB]
1298s Get:203 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-e1071 ppc64el 1.7-16-1 [579 kB]
1299s Get:204 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-kernsmooth ppc64el 2.23-26-1 [96.6 kB]
1299s Get:205 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-classint ppc64el 0.4-11+dfsg-1 [109 kB]
1299s Get:206 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-dbi all 1.2.3-1 [853 kB]
1299s Get:207 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
1299s Get:208 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcpp ppc64el 1.0.14-1 [2006 kB]
1299s Get:209 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-wk ppc64el 0.9.4-1 [1815 kB]
1299s Get:210 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-s2 ppc64el 1.1.7-1 [2205 kB]
1299s Get:211 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-units ppc64el 0.8-5+dfsg-1 [275 kB]
1299s Get:212 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sf ppc64el 1.0-19+dfsg-1 [3287 kB]
1300s Get:213 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-areal all 0.1.8+dfsg-2 [1004 kB]
1300s Get:214 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sys ppc64el 3.4.3-1 [45.5 kB]
1300s Get:215 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-askpass ppc64el 1.2.1-1 [24.9 kB]
1300s Get:216 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB]
1300s Get:217 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-bdsmatrix ppc64el 1.3-7-1 [308 kB]
1300s Get:218 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-brio ppc64el 1.1.5-1 [39.1 kB]
1300s Get:219 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fastmap ppc64el 1.2.0-1 [75.0 kB]
1300s Get:220 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cachem ppc64el 1.1.0-1 [74.1 kB]
1300s Get:221 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-digest ppc64el 0.6.37-1 [223 kB]
1300s Get:222 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-htmltools ppc64el 0.5.8.1-1 [373 kB]
1300s Get:223 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
1300s Get:224 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-jsonlite ppc64el 1.8.9+dfsg-1 [451 kB]
1300s Get:225 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB]
1300s Get:226 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mime ppc64el 0.12-2 [35.9 kB]
1300s Get:227 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fs ppc64el 1.6.5+dfsg-1 [248 kB]
1300s Get:228 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB]
1300s Get:229 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sass ppc64el 0.4.9+dfsg-1 [1034 kB]
1300s Get:230 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
1300s Get:231 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cairo ppc64el 1.6-2-1 [97.5 kB]
1300s Get:232 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ps ppc64el 1.8.1-1 [399 kB]
1300s Get:233 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-processx ppc64el 3.8.5-1 [360 kB]
1300s Get:234 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-callr all 3.7.6-1 [458 kB]
1300s Get:235 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cluster ppc64el 2.1.8-1 [586 kB]
1300s Get:236 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-clue ppc64el 0.3-66-1 [971 kB]
1300s Get:237 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-codetools all 0.2-20-1 [90.5 kB]
1300s Get:238 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-collapse ppc64el 2.0.19-1 [3440 kB]
1301s Get:239 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-colorspace ppc64el 2.1-1+dfsg-1 [1570 kB]
1301s Get:240 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-commonmark ppc64el 1.9.2-2 [141 kB]
1301s Get:241 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB]
1301s Get:242 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rex all 1.2.1-1 [129 kB]
1301s Get:243 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-curl ppc64el 6.1.0+dfsg-1 [197 kB]
1301s Get:244 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-openssl ppc64el 2.2.0+dfsg-1 [408 kB]
1301s Get:245 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB]
1301s Get:246 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-crayon all 1.5.3-1 [165 kB]
1301s Get:247 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-yaml ppc64el 2.3.10-1 [123 kB]
1301s Get:248 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-covr ppc64el 3.6.4+dfsg-1 [302 kB]
1301s Get:249 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-cpp11 all 0.5.1-1 [233 kB]
1301s Get:250 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-deldir ppc64el 2.0-4-1build1 [273 kB]
1301s Get:251 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-desc all 1.4.3-1 [359 kB]
1301s Get:252 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-diffobj ppc64el 0.3.5-1 [1118 kB]
1301s Get:253 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-evaluate all 1.0.3-1 [114 kB]
1301s Get:254 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-farver ppc64el 2.1.2-1 [1389 kB]
1301s Get:255 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fnn ppc64el 1.1.4.1-1 [137 kB]
1301s Get:256 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-fontawesome all 0.5.3-1 [1331 kB]
1301s Get:257 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-formula all 1.2-5-1 [158 kB]
1301s Get:258 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-globals all 0.16.3-1 [120 kB]
1301s Get:259 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
1301s Get:260 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-parallelly ppc64el 1.41.0-1 [507 kB]
1301s Get:261 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-future all 1.34.0+dfsg-1 [646 kB]
1301s Get:262 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
1301s Get:263 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
1301s Get:264 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB]
1302s Get:265 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lattice ppc64el 0.22-6-1 [1340 kB]
1302s Get:266 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-nlme ppc64el 3.1.167-1 [2329 kB]
1302s Get:267 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-matrix ppc64el 1.7-2-1 [4536 kB]
1303s Get:268 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB]
1303s Get:269 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB]
1303s Get:270 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-munsell all 0.5.1-1 [213 kB]
1303s Get:271 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
1303s Get:272 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB]
1303s Get:273 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB]
1303s Get:274 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
1303s Get:275 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tweenr ppc64el 2.0.3-1 [432 kB]
1303s Get:276 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-polyclip ppc64el 1.10-7-1 [124 kB]
1303s Get:277 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-systemfonts ppc64el 1.2.1-1 [346 kB]
1303s Get:278 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rcppeigen ppc64el 0.3.4.0.2-1 [1477 kB]
1303s Get:279 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggforce ppc64el 0.4.2-1 [1836 kB]
1303s Get:280 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stringi ppc64el 1.8.4-1build1 [949 kB]
1303s Get:281 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB]
1303s Get:282 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ggthemes all 5.1.0-1 [434 kB]
1303s Get:283 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-goftest ppc64el 1.2-3-1 [60.2 kB]
1303s Get:284 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-gridextra all 2.3-3build1 [1024 kB]
1303s Get:285 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xfun ppc64el 0.50+dfsg-1 [569 kB]
1304s Get:286 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-highr all 0.11+dfsg-1 [38.5 kB]
1304s Get:287 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-later ppc64el 1.4.1+dfsg-1 [153 kB]
1304s Get:288 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-promises ppc64el 1.3.2+dfsg-1 [297 kB]
1304s Get:289 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-httpuv ppc64el 1.6.15+dfsg-1 [521 kB]
1304s Get:290 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-intervals ppc64el 0.15.5-1 [603 kB]
1304s Get:291 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
1304s Get:292 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-knitr all 1.49+dfsg-1 [859 kB]
1304s Get:293 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-zoo ppc64el 1.8-12-2 [986 kB]
1304s Get:294 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lmtest ppc64el 0.9.40-1 [397 kB]
1304s Get:295 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-lwgeom ppc64el 0.2-14-1 [482 kB]
1304s Get:296 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-maps ppc64el 3.4.2-1 [2366 kB]
1304s Get:297 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-mapdata ppc64el 2.3.1-1 [23.5 MB]
1306s Get:298 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-misctools all 0.6-28-1 [99.9 kB]
1306s Get:299 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sandwich all 3.1-1-1 [1483 kB]
1306s Get:300 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-maxlik all 1.5-2.1-1 [1083 kB]
1306s Get:301 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rnetcdf ppc64el 2.9-1-1build2 [254 kB]
1306s Get:302 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB]
1307s Get:303 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ncmeta all 0.3.6-1 [360 kB]
1307s Get:304 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-stars all 0.6-7-1 [4411 kB]
1307s Get:305 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB]
1308s Get:306 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pbapply all 1.7-2-1 [102 kB]
1308s Get:307 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pcict ppc64el 0.5-4.4-1 [97.5 kB]
1308s Get:308 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgbuild all 1.4.6-1 [213 kB]
1308s Get:309 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rprojroot all 2.0.4-2 [125 kB]
1308s Get:310 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-pkgload all 1.4.0-1 [247 kB]
1308s Get:311 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rbibutils ppc64el 2.3-1 [1047 kB]
1308s Get:312 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rdpack all 2.6.2-1 [757 kB]
1308s Get:313 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-plm all 2.6-5-1 [1815 kB]
1308s Get:314 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-praise all 1.0.0-4build1 [20.3 kB]
1308s Get:315 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-randomforest ppc64el 4.7-1.2-1 [227 kB]
1308s Get:316 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sp ppc64el 1:2.1-4+dfsg-1 [1474 kB]
1308s Get:317 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-terra ppc64el 1.8-10-1 [4285 kB]
1308s Get:318 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-raster ppc64el 3.6-31-1 [3184 kB]
1309s Get:319 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tinytex all 0.54-1 [147 kB]
1309s Get:320 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-modernizr all 3.13.0-0.1 [101 kB]
1309s Get:321 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB]
1309s Get:322 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB]
1309s Get:323 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
1309s Get:324 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-shiny all 1.9.1+dfsg-1 [3111 kB]
1309s Get:325 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
1309s Get:326 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-survival ppc64el 3.8-3-1 [8254 kB]
1310s Get:327 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-rpart ppc64el 4.1.24-1 [676 kB]
1310s Get:328 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-xts ppc64el 0.14.1-1 [1209 kB]
1310s Get:329 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spacetime all 1.3-2-2 [2775 kB]
1310s Get:330 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.utils ppc64el 3.1-2-1 [383 kB]
1310s Get:331 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.data all 3.1-4-1 [4047 kB]
1310s Get:332 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.geom ppc64el 3.2-9-2 [3979 kB]
1311s Get:333 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.random ppc64el 3.2-3-1 [1174 kB]
1311s Get:334 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-tensor all 1.5-4 [15.7 kB]
1311s Get:335 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.sparse ppc64el 3.1-0-1 [222 kB]
1311s Get:336 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.explore ppc64el 3.2-7-1 [3444 kB]
1311s Get:337 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.model ppc64el 3.2-11-1 [3384 kB]
1311s Get:338 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat.linnet ppc64el 3.1-5-1 [1476 kB]
1311s Get:339 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-spatstat ppc64el 3.0-8-1 [3881 kB]
1312s Get:340 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-waldo all 0.6.1-1 [150 kB]
1312s Get:341 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el r-cran-testthat ppc64el 3.2.3-1 [1649 kB]
1312s Get:342 http://ftpmaster.internal/ubuntu plucky/universe ppc64el r-cran-viridis all 0.6.5-1 [2770 kB]
1313s Preconfiguring packages ...
1313s Fetched 394 MB in 27s (14.7 MB/s)
1313s Selecting previously unselected package libisl23:ppc64el.
1313s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 106283 files and directories currently installed.)
1313s Preparing to unpack .../000-libisl23_0.27-1_ppc64el.deb ...
1313s Unpacking libisl23:ppc64el (0.27-1) ...
1313s Selecting previously unselected package libmpc3:ppc64el.
1313s Preparing to unpack .../001-libmpc3_1.3.1-1build2_ppc64el.deb ...
1313s Unpacking libmpc3:ppc64el (1.3.1-1build2) ...
1313s Selecting previously unselected package cpp-14-powerpc64le-linux-gnu.
1313s Preparing to unpack .../002-cpp-14-powerpc64le-linux-gnu_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking cpp-14-powerpc64le-linux-gnu (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package cpp-14.
1313s Preparing to unpack .../003-cpp-14_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking cpp-14 (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package cpp-powerpc64le-linux-gnu.
1313s Preparing to unpack .../004-cpp-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1313s Unpacking cpp-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ...
1313s Selecting previously unselected package cpp.
1313s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1313s Unpacking cpp (4:14.1.0-2ubuntu1) ...
1313s Selecting previously unselected package libcc1-0:ppc64el.
1313s Preparing to unpack .../006-libcc1-0_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking libcc1-0:ppc64el (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package libgomp1:ppc64el.
1313s Preparing to unpack .../007-libgomp1_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking libgomp1:ppc64el (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package libitm1:ppc64el.
1313s Preparing to unpack .../008-libitm1_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking libitm1:ppc64el (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package libasan8:ppc64el.
1313s Preparing to unpack .../009-libasan8_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking libasan8:ppc64el (14.2.0-13ubuntu1) ...
1313s Selecting previously unselected package liblsan0:ppc64el.
1313s Preparing to unpack .../010-liblsan0_14.2.0-13ubuntu1_ppc64el.deb ...
1313s Unpacking liblsan0:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package libtsan2:ppc64el.
1314s Preparing to unpack .../011-libtsan2_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking libtsan2:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package libubsan1:ppc64el.
1314s Preparing to unpack .../012-libubsan1_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking libubsan1:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package libquadmath0:ppc64el.
1314s Preparing to unpack .../013-libquadmath0_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking libquadmath0:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package libgcc-14-dev:ppc64el.
1314s Preparing to unpack .../014-libgcc-14-dev_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking libgcc-14-dev:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package gcc-14-powerpc64le-linux-gnu.
1314s Preparing to unpack .../015-gcc-14-powerpc64le-linux-gnu_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking gcc-14-powerpc64le-linux-gnu (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package gcc-14.
1314s Preparing to unpack .../016-gcc-14_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking gcc-14 (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package gcc-powerpc64le-linux-gnu.
1314s Preparing to unpack .../017-gcc-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1314s Unpacking gcc-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ...
1314s Selecting previously unselected package gcc.
1314s Preparing to unpack .../018-gcc_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1314s Unpacking gcc (4:14.1.0-2ubuntu1) ...
1314s Selecting previously unselected package libstdc++-14-dev:ppc64el.
1314s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking libstdc++-14-dev:ppc64el (14.2.0-13ubuntu1) ...
1314s Selecting previously unselected package g++-14-powerpc64le-linux-gnu.
1314s Preparing to unpack .../020-g++-14-powerpc64le-linux-gnu_14.2.0-13ubuntu1_ppc64el.deb ...
1314s Unpacking g++-14-powerpc64le-linux-gnu (14.2.0-13ubuntu1) ...
1315s Selecting previously unselected package g++-14.
1315s Preparing to unpack .../021-g++-14_14.2.0-13ubuntu1_ppc64el.deb ...
1315s Unpacking g++-14 (14.2.0-13ubuntu1) ...
1315s Selecting previously unselected package g++-powerpc64le-linux-gnu.
1315s Preparing to unpack .../022-g++-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1315s Unpacking g++-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ...
1315s Selecting previously unselected package g++.
1315s Preparing to unpack .../023-g++_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1315s Unpacking g++ (4:14.1.0-2ubuntu1) ...
1315s Selecting previously unselected package build-essential.
1315s Preparing to unpack .../024-build-essential_12.10ubuntu1_ppc64el.deb ...
1315s Unpacking build-essential (12.10ubuntu1) ...
1315s Selecting previously unselected package dctrl-tools.
1315s Preparing to unpack .../025-dctrl-tools_2.24-3build3_ppc64el.deb ...
1315s Unpacking dctrl-tools (2.24-3build3) ...
1315s Selecting previously unselected package fonts-dejavu-mono.
1315s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ...
1315s Unpacking fonts-dejavu-mono (2.37-8) ...
1315s Selecting previously unselected package fonts-dejavu-core.
1315s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ...
1315s Unpacking fonts-dejavu-core (2.37-8) ...
1315s Selecting previously unselected package fontconfig-config.
1315s Preparing to unpack .../028-fontconfig-config_2.15.0-1.1ubuntu2_ppc64el.deb ...
1315s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
1315s Selecting previously unselected package libfontconfig1:ppc64el.
1315s Preparing to unpack .../029-libfontconfig1_2.15.0-1.1ubuntu2_ppc64el.deb ...
1315s Unpacking libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ...
1315s Selecting previously unselected package fontconfig.
1315s Preparing to unpack .../030-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ...
1315s Unpacking fontconfig (2.15.0-1.1ubuntu2) ...
1315s Selecting previously unselected package fonts-font-awesome.
1315s Preparing to unpack .../031-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
1315s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
1315s Selecting previously unselected package fonts-glyphicons-halflings.
1315s Preparing to unpack .../032-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
1315s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
1315s Selecting previously unselected package fonts-mathjax.
1315s Preparing to unpack .../033-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
1315s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
1315s Selecting previously unselected package gdal-data.
1315s Preparing to unpack .../034-gdal-data_3.10.1+dfsg-1build2_all.deb ...
1315s Unpacking gdal-data (3.10.1+dfsg-1build2) ...
1315s Selecting previously unselected package gdal-plugins:ppc64el.
1315s Preparing to unpack .../035-gdal-plugins_3.10.1+dfsg-1build2_ppc64el.deb ...
1315s Unpacking gdal-plugins:ppc64el (3.10.1+dfsg-1build2) ...
1315s Selecting previously unselected package libgfortran5:ppc64el.
1315s Preparing to unpack .../036-libgfortran5_14.2.0-13ubuntu1_ppc64el.deb ...
1315s Unpacking libgfortran5:ppc64el (14.2.0-13ubuntu1) ...
1315s Selecting previously unselected package libgfortran-14-dev:ppc64el.
1315s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-13ubuntu1_ppc64el.deb ...
1315s Unpacking libgfortran-14-dev:ppc64el (14.2.0-13ubuntu1) ...
1316s Selecting previously unselected package gfortran-14-powerpc64le-linux-gnu.
1316s Preparing to unpack .../038-gfortran-14-powerpc64le-linux-gnu_14.2.0-13ubuntu1_ppc64el.deb ...
1316s Unpacking gfortran-14-powerpc64le-linux-gnu (14.2.0-13ubuntu1) ...
1316s Selecting previously unselected package gfortran-14.
1316s Preparing to unpack .../039-gfortran-14_14.2.0-13ubuntu1_ppc64el.deb ...
1316s Unpacking gfortran-14 (14.2.0-13ubuntu1) ...
1316s Selecting previously unselected package gfortran-powerpc64le-linux-gnu.
1316s Preparing to unpack .../040-gfortran-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1316s Unpacking gfortran-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ...
1316s Selecting previously unselected package gfortran.
1316s Preparing to unpack .../041-gfortran_4%3a14.1.0-2ubuntu1_ppc64el.deb ...
1316s Unpacking gfortran (4:14.1.0-2ubuntu1) ...
1316s Selecting previously unselected package icu-devtools.
1316s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_ppc64el.deb ...
1316s Unpacking icu-devtools (76.1-1ubuntu2) ...
1316s Selecting previously unselected package javascript-common.
1316s Preparing to unpack .../043-javascript-common_11+nmu1_all.deb ...
1316s Unpacking javascript-common (11+nmu1) ...
1316s Selecting previously unselected package libabsl20230802:ppc64el.
1316s Preparing to unpack .../044-libabsl20230802_20230802.1-4ubuntu2_ppc64el.deb ...
1316s Unpacking libabsl20230802:ppc64el (20230802.1-4ubuntu2) ...
1316s Selecting previously unselected package libaec0:ppc64el.
1316s Preparing to unpack .../045-libaec0_1.1.3-1_ppc64el.deb ...
1316s Unpacking libaec0:ppc64el (1.1.3-1) ...
1316s Selecting previously unselected package libaom3:ppc64el.
1316s Preparing to unpack .../046-libaom3_3.11.0-1_ppc64el.deb ...
1316s Unpacking libaom3:ppc64el (3.11.0-1) ...
1316s Selecting previously unselected package libblas3:ppc64el.
1316s Preparing to unpack .../047-libblas3_3.12.0-4_ppc64el.deb ...
1316s Unpacking libblas3:ppc64el (3.12.0-4) ...
1316s Selecting previously unselected package liblapack3:ppc64el.
1316s Preparing to unpack .../048-liblapack3_3.12.0-4_ppc64el.deb ...
1316s Unpacking liblapack3:ppc64el (3.12.0-4) ...
1316s Selecting previously unselected package libarpack2t64:ppc64el.
1316s Preparing to unpack .../049-libarpack2t64_3.9.1-4_ppc64el.deb ...
1316s Unpacking libarpack2t64:ppc64el (3.9.1-4) ...
1316s Selecting previously unselected package libarmadillo14.
1316s Preparing to unpack .../050-libarmadillo14_1%3a14.2.1+dfsg-1_ppc64el.deb ...
1316s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ...
1316s Selecting previously unselected package libdav1d7:ppc64el.
1316s Preparing to unpack .../051-libdav1d7_1.5.1-1_ppc64el.deb ...
1316s Unpacking libdav1d7:ppc64el (1.5.1-1) ...
1316s Selecting previously unselected package libgav1-1:ppc64el.
1316s Preparing to unpack .../052-libgav1-1_0.19.0-3_ppc64el.deb ...
1316s Unpacking libgav1-1:ppc64el (0.19.0-3) ...
1316s Selecting previously unselected package librav1e0.7:ppc64el.
1316s Preparing to unpack .../053-librav1e0.7_0.7.1-9_ppc64el.deb ...
1316s Unpacking librav1e0.7:ppc64el (0.7.1-9) ...
1316s Selecting previously unselected package libsvtav1enc2:ppc64el.
1316s Preparing to unpack .../054-libsvtav1enc2_2.3.0+dfsg-1_ppc64el.deb ...
1316s Unpacking libsvtav1enc2:ppc64el (2.3.0+dfsg-1) ...
1316s Selecting previously unselected package libjpeg-turbo8:ppc64el.
1316s Preparing to unpack .../055-libjpeg-turbo8_2.1.5-3ubuntu2_ppc64el.deb ...
1316s Unpacking libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ...
1316s Selecting previously unselected package libjpeg8:ppc64el.
1316s Preparing to unpack .../056-libjpeg8_8c-2ubuntu11_ppc64el.deb ...
1316s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ...
1316s Selecting previously unselected package libyuv0:ppc64el.
1316s Preparing to unpack .../057-libyuv0_0.0.1899.20250103-1_ppc64el.deb ...
1316s Unpacking libyuv0:ppc64el (0.0.1899.20250103-1) ...
1316s Selecting previously unselected package libavif16:ppc64el.
1316s Preparing to unpack .../058-libavif16_1.1.1-1ubuntu1_ppc64el.deb ...
1316s Unpacking libavif16:ppc64el (1.1.1-1ubuntu1) ...
1316s Selecting previously unselected package libblas-dev:ppc64el.
1316s Preparing to unpack .../059-libblas-dev_3.12.0-4_ppc64el.deb ...
1316s Unpacking libblas-dev:ppc64el (3.12.0-4) ...
1317s Selecting previously unselected package libsnappy1v5:ppc64el.
1317s Preparing to unpack .../060-libsnappy1v5_1.2.1-1_ppc64el.deb ...
1317s Unpacking libsnappy1v5:ppc64el (1.2.1-1) ...
1317s Selecting previously unselected package libblosc1:ppc64el.
1317s Preparing to unpack .../061-libblosc1_1.21.5+ds-1build1_ppc64el.deb ...
1317s Unpacking libblosc1:ppc64el (1.21.5+ds-1build1) ...
1317s Selecting previously unselected package libbz2-dev:ppc64el.
1317s Preparing to unpack .../062-libbz2-dev_1.0.8-6_ppc64el.deb ...
1317s Unpacking libbz2-dev:ppc64el (1.0.8-6) ...
1317s Selecting previously unselected package libpixman-1-0:ppc64el.
1317s Preparing to unpack .../063-libpixman-1-0_0.44.0-3_ppc64el.deb ...
1317s Unpacking libpixman-1-0:ppc64el (0.44.0-3) ...
1317s Selecting previously unselected package libxcb-render0:ppc64el.
1317s Preparing to unpack .../064-libxcb-render0_1.17.0-2_ppc64el.deb ...
1317s Unpacking libxcb-render0:ppc64el (1.17.0-2) ...
1317s Selecting previously unselected package libxcb-shm0:ppc64el.
1317s Preparing to unpack .../065-libxcb-shm0_1.17.0-2_ppc64el.deb ...
1317s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ...
1317s Selecting previously unselected package libxrender1:ppc64el.
1317s Preparing to unpack .../066-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ...
1317s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ...
1317s Selecting previously unselected package libcairo2:ppc64el.
1317s Preparing to unpack .../067-libcairo2_1.18.2-2_ppc64el.deb ...
1317s Unpacking libcairo2:ppc64el (1.18.2-2) ...
1317s Selecting previously unselected package libcfitsio10t64:ppc64el.
1317s Preparing to unpack .../068-libcfitsio10t64_4.5.0-5_ppc64el.deb ...
1317s Unpacking libcfitsio10t64:ppc64el (4.5.0-5) ...
1317s Selecting previously unselected package libdatrie1:ppc64el.
1317s Preparing to unpack .../069-libdatrie1_0.2.13-3build1_ppc64el.deb ...
1317s Unpacking libdatrie1:ppc64el (0.2.13-3build1) ...
1317s Selecting previously unselected package libde265-0:ppc64el.
1317s Preparing to unpack .../070-libde265-0_1.0.15-1build4_ppc64el.deb ...
1317s Unpacking libde265-0:ppc64el (1.0.15-1build4) ...
1317s Selecting previously unselected package libdeflate0:ppc64el.
1317s Preparing to unpack .../071-libdeflate0_1.23-1_ppc64el.deb ...
1317s Unpacking libdeflate0:ppc64el (1.23-1) ...
1317s Selecting previously unselected package libdeflate-dev:ppc64el.
1317s Preparing to unpack .../072-libdeflate-dev_1.23-1_ppc64el.deb ...
1317s Unpacking libdeflate-dev:ppc64el (1.23-1) ...
1317s Selecting previously unselected package libfyba0t64:ppc64el.
1317s Preparing to unpack .../073-libfyba0t64_4.1.1-11build1_ppc64el.deb ...
1317s Unpacking libfyba0t64:ppc64el (4.1.1-11build1) ...
1317s Selecting previously unselected package libminizip1t64:ppc64el.
1317s Preparing to unpack .../074-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_ppc64el.deb ...
1317s Unpacking libminizip1t64:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1317s Selecting previously unselected package libfreexl1:ppc64el.
1317s Preparing to unpack .../075-libfreexl1_2.0.0-1build2_ppc64el.deb ...
1317s Unpacking libfreexl1:ppc64el (2.0.0-1build2) ...
1317s Selecting previously unselected package libgeos3.13.0:ppc64el.
1317s Preparing to unpack .../076-libgeos3.13.0_3.13.0-1_ppc64el.deb ...
1317s Unpacking libgeos3.13.0:ppc64el (3.13.0-1) ...
1317s Selecting previously unselected package libgeos-c1t64:ppc64el.
1317s Preparing to unpack .../077-libgeos-c1t64_3.13.0-1_ppc64el.deb ...
1317s Unpacking libgeos-c1t64:ppc64el (3.13.0-1) ...
1317s Selecting previously unselected package proj-data.
1317s Preparing to unpack .../078-proj-data_9.5.1-1_all.deb ...
1317s Unpacking proj-data (9.5.1-1) ...
1317s Selecting previously unselected package libjbig0:ppc64el.
1317s Preparing to unpack .../079-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ...
1317s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ...
1317s Selecting previously unselected package liblerc4:ppc64el.
1317s Preparing to unpack .../080-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ...
1317s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ...
1317s Selecting previously unselected package libsharpyuv0:ppc64el.
1317s Preparing to unpack .../081-libsharpyuv0_1.5.0-0.1_ppc64el.deb ...
1317s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ...
1317s Selecting previously unselected package libwebp7:ppc64el.
1317s Preparing to unpack .../082-libwebp7_1.5.0-0.1_ppc64el.deb ...
1317s Unpacking libwebp7:ppc64el (1.5.0-0.1) ...
1317s Selecting previously unselected package libtiff6:ppc64el.
1317s Preparing to unpack .../083-libtiff6_4.5.1+git230720-4ubuntu4_ppc64el.deb ...
1317s Unpacking libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ...
1317s Selecting previously unselected package libproj25:ppc64el.
1317s Preparing to unpack .../084-libproj25_9.5.1-1_ppc64el.deb ...
1317s Unpacking libproj25:ppc64el (9.5.1-1) ...
1317s Selecting previously unselected package libgeotiff5:ppc64el.
1317s Preparing to unpack .../085-libgeotiff5_1.7.3-1_ppc64el.deb ...
1317s Unpacking libgeotiff5:ppc64el (1.7.3-1) ...
1317s Selecting previously unselected package libgif7:ppc64el.
1317s Preparing to unpack .../086-libgif7_5.2.2-1ubuntu1_ppc64el.deb ...
1317s Unpacking libgif7:ppc64el (5.2.2-1ubuntu1) ...
1317s Selecting previously unselected package libsz2:ppc64el.
1317s Preparing to unpack .../087-libsz2_1.1.3-1_ppc64el.deb ...
1317s Unpacking libsz2:ppc64el (1.1.3-1) ...
1317s Selecting previously unselected package libhdf4-0-alt:ppc64el.
1317s Preparing to unpack .../088-libhdf4-0-alt_4.3.0-1_ppc64el.deb ...
1317s Unpacking libhdf4-0-alt:ppc64el (4.3.0-1) ...
1317s Selecting previously unselected package libhdf5-310:ppc64el.
1317s Preparing to unpack .../089-libhdf5-310_1.14.5+repack-3_ppc64el.deb ...
1317s Unpacking libhdf5-310:ppc64el (1.14.5+repack-3) ...
1317s Selecting previously unselected package libheif-plugin-aomdec:ppc64el.
1317s Preparing to unpack .../090-libheif-plugin-aomdec_1.19.5-1build1_ppc64el.deb ...
1317s Unpacking libheif-plugin-aomdec:ppc64el (1.19.5-1build1) ...
1317s Selecting previously unselected package libheif-plugin-libde265:ppc64el.
1317s Preparing to unpack .../091-libheif-plugin-libde265_1.19.5-1build1_ppc64el.deb ...
1317s Unpacking libheif-plugin-libde265:ppc64el (1.19.5-1build1) ...
1317s Selecting previously unselected package libheif1:ppc64el.
1317s Preparing to unpack .../092-libheif1_1.19.5-1build1_ppc64el.deb ...
1317s Unpacking libheif1:ppc64el (1.19.5-1build1) ...
1318s Selecting previously unselected package liburiparser1:ppc64el.
1318s Preparing to unpack .../093-liburiparser1_0.9.8+dfsg-2_ppc64el.deb ...
1318s Unpacking liburiparser1:ppc64el (0.9.8+dfsg-2) ...
1318s Selecting previously unselected package libkmlbase1t64:ppc64el.
1318s Preparing to unpack .../094-libkmlbase1t64_1.3.0-12build1_ppc64el.deb ...
1318s Unpacking libkmlbase1t64:ppc64el (1.3.0-12build1) ...
1318s Selecting previously unselected package libkmldom1t64:ppc64el.
1318s Preparing to unpack .../095-libkmldom1t64_1.3.0-12build1_ppc64el.deb ...
1318s Unpacking libkmldom1t64:ppc64el (1.3.0-12build1) ...
1318s Selecting previously unselected package libkmlengine1t64:ppc64el.
1318s Preparing to unpack .../096-libkmlengine1t64_1.3.0-12build1_ppc64el.deb ...
1318s Unpacking libkmlengine1t64:ppc64el (1.3.0-12build1) ...
1318s Selecting previously unselected package mysql-common.
1318s Preparing to unpack .../097-mysql-common_5.8+1.1.1_all.deb ...
1318s Unpacking mysql-common (5.8+1.1.1) ...
1318s Selecting previously unselected package libmysqlclient24:ppc64el.
1318s Preparing to unpack .../098-libmysqlclient24_8.4.4-0ubuntu1_ppc64el.deb ...
1318s Unpacking libmysqlclient24:ppc64el (8.4.4-0ubuntu1) ...
1318s Selecting previously unselected package libhdf5-hl-310:ppc64el.
1318s Preparing to unpack .../099-libhdf5-hl-310_1.14.5+repack-3_ppc64el.deb ...
1318s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-3) ...
1318s Selecting previously unselected package libnetcdf19t64:ppc64el.
1318s Preparing to unpack .../100-libnetcdf19t64_1%3a4.9.2-6ubuntu2_ppc64el.deb ...
1318s Unpacking libnetcdf19t64:ppc64el (1:4.9.2-6ubuntu2) ...
1318s Selecting previously unselected package libltdl7:ppc64el.
1318s Preparing to unpack .../101-libltdl7_2.5.4-2.1_ppc64el.deb ...
1318s Unpacking libltdl7:ppc64el (2.5.4-2.1) ...
1318s Selecting previously unselected package libodbc2:ppc64el.
1318s Preparing to unpack .../102-libodbc2_2.3.12-2ubuntu1_ppc64el.deb ...
1318s Unpacking libodbc2:ppc64el (2.3.12-2ubuntu1) ...
1318s Selecting previously unselected package unixodbc-common.
1318s Preparing to unpack .../103-unixodbc-common_2.3.12-2ubuntu1_all.deb ...
1318s Unpacking unixodbc-common (2.3.12-2ubuntu1) ...
1318s Selecting previously unselected package libodbcinst2:ppc64el.
1318s Preparing to unpack .../104-libodbcinst2_2.3.12-2ubuntu1_ppc64el.deb ...
1318s Unpacking libodbcinst2:ppc64el (2.3.12-2ubuntu1) ...
1318s Selecting previously unselected package libogdi4.1:ppc64el.
1318s Preparing to unpack .../105-libogdi4.1_4.1.1+ds-5_ppc64el.deb ...
1318s Unpacking libogdi4.1:ppc64el (4.1.1+ds-5) ...
1318s Selecting previously unselected package libopenjp2-7:ppc64el.
1318s Preparing to unpack .../106-libopenjp2-7_2.5.0-2ubuntu3_ppc64el.deb ...
1318s Unpacking libopenjp2-7:ppc64el (2.5.0-2ubuntu3) ...
1318s Selecting previously unselected package libgpgmepp6t64:ppc64el.
1318s Preparing to unpack .../107-libgpgmepp6t64_1.24.1-2ubuntu1_ppc64el.deb ...
1318s Unpacking libgpgmepp6t64:ppc64el (1.24.1-2ubuntu1) ...
1318s Selecting previously unselected package liblcms2-2:ppc64el.
1318s Preparing to unpack .../108-liblcms2-2_2.16-2_ppc64el.deb ...
1318s Unpacking liblcms2-2:ppc64el (2.16-2) ...
1318s Selecting previously unselected package libpoppler145:ppc64el.
1318s Preparing to unpack .../109-libpoppler145_25.01.0-2_ppc64el.deb ...
1318s Unpacking libpoppler145:ppc64el (25.01.0-2) ...
1318s Selecting previously unselected package libpq5:ppc64el.
1318s Preparing to unpack .../110-libpq5_17.2-1build2_ppc64el.deb ...
1318s Unpacking libpq5:ppc64el (17.2-1build2) ...
1318s Selecting previously unselected package libqhull-r8.0:ppc64el.
1318s Preparing to unpack .../111-libqhull-r8.0_2020.2-6build1_ppc64el.deb ...
1318s Unpacking libqhull-r8.0:ppc64el (2020.2-6build1) ...
1318s Selecting previously unselected package librttopo1:ppc64el.
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1323s Selecting previously unselected package r-cran-e1071.
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1323s Selecting previously unselected package r-cran-pkgkitten.
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1324s Unpacking r-cran-s2 (1.1.7-1) ...
1324s Selecting previously unselected package r-cran-units.
1324s Preparing to unpack .../210-r-cran-units_0.8-5+dfsg-1_ppc64el.deb ...
1324s Unpacking r-cran-units (0.8-5+dfsg-1) ...
1324s Selecting previously unselected package r-cran-sf.
1324s Preparing to unpack .../211-r-cran-sf_1.0-19+dfsg-1_ppc64el.deb ...
1324s Unpacking r-cran-sf (1.0-19+dfsg-1) ...
1324s Selecting previously unselected package r-cran-areal.
1324s Preparing to unpack .../212-r-cran-areal_0.1.8+dfsg-2_all.deb ...
1324s Unpacking r-cran-areal (0.1.8+dfsg-2) ...
1324s Selecting previously unselected package r-cran-sys.
1324s Preparing to unpack .../213-r-cran-sys_3.4.3-1_ppc64el.deb ...
1324s Unpacking r-cran-sys (3.4.3-1) ...
1324s Selecting previously unselected package r-cran-askpass.
1324s Preparing to unpack .../214-r-cran-askpass_1.2.1-1_ppc64el.deb ...
1324s Unpacking r-cran-askpass (1.2.1-1) ...
1324s Selecting previously unselected package r-cran-base64enc.
1324s Preparing to unpack .../215-r-cran-base64enc_0.1-3-3_ppc64el.deb ...
1324s Unpacking r-cran-base64enc (0.1-3-3) ...
1324s Selecting previously unselected package r-cran-bdsmatrix.
1324s Preparing to unpack .../216-r-cran-bdsmatrix_1.3-7-1_ppc64el.deb ...
1324s Unpacking r-cran-bdsmatrix (1.3-7-1) ...
1324s Selecting previously unselected package r-cran-brio.
1324s Preparing to unpack .../217-r-cran-brio_1.1.5-1_ppc64el.deb ...
1324s Unpacking r-cran-brio (1.1.5-1) ...
1324s Selecting previously unselected package r-cran-fastmap.
1324s Preparing to unpack .../218-r-cran-fastmap_1.2.0-1_ppc64el.deb ...
1324s Unpacking r-cran-fastmap (1.2.0-1) ...
1324s Selecting previously unselected package r-cran-cachem.
1324s Preparing to unpack .../219-r-cran-cachem_1.1.0-1_ppc64el.deb ...
1324s Unpacking r-cran-cachem (1.1.0-1) ...
1324s Selecting previously unselected package r-cran-digest.
1324s Preparing to unpack .../220-r-cran-digest_0.6.37-1_ppc64el.deb ...
1324s Unpacking r-cran-digest (0.6.37-1) ...
1324s Selecting previously unselected package r-cran-htmltools.
1324s Preparing to unpack .../221-r-cran-htmltools_0.5.8.1-1_ppc64el.deb ...
1324s Unpacking r-cran-htmltools (0.5.8.1-1) ...
1324s Selecting previously unselected package r-cran-jquerylib.
1324s Preparing to unpack .../222-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ...
1324s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ...
1324s Selecting previously unselected package r-cran-jsonlite.
1324s Preparing to unpack .../223-r-cran-jsonlite_1.8.9+dfsg-1_ppc64el.deb ...
1324s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ...
1324s Selecting previously unselected package r-cran-memoise.
1324s Preparing to unpack .../224-r-cran-memoise_2.0.1-1_all.deb ...
1324s Unpacking r-cran-memoise (2.0.1-1) ...
1324s Selecting previously unselected package r-cran-mime.
1324s Preparing to unpack .../225-r-cran-mime_0.12-2_ppc64el.deb ...
1324s Unpacking r-cran-mime (0.12-2) ...
1324s Selecting previously unselected package r-cran-fs.
1324s Preparing to unpack .../226-r-cran-fs_1.6.5+dfsg-1_ppc64el.deb ...
1324s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
1324s Selecting previously unselected package r-cran-rappdirs.
1324s Preparing to unpack .../227-r-cran-rappdirs_0.3.3-1_ppc64el.deb ...
1324s Unpacking r-cran-rappdirs (0.3.3-1) ...
1324s Selecting previously unselected package r-cran-sass.
1324s Preparing to unpack .../228-r-cran-sass_0.4.9+dfsg-1_ppc64el.deb ...
1324s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
1324s Selecting previously unselected package r-cran-bslib.
1324s Preparing to unpack .../229-r-cran-bslib_0.8.0+dfsg-1_all.deb ...
1324s Unpacking r-cran-bslib (0.8.0+dfsg-1) ...
1324s Selecting previously unselected package r-cran-cairo.
1324s Preparing to unpack .../230-r-cran-cairo_1.6-2-1_ppc64el.deb ...
1324s Unpacking r-cran-cairo (1.6-2-1) ...
1325s Selecting previously unselected package r-cran-ps.
1325s Preparing to unpack .../231-r-cran-ps_1.8.1-1_ppc64el.deb ...
1325s Unpacking r-cran-ps (1.8.1-1) ...
1325s Selecting previously unselected package r-cran-processx.
1325s Preparing to unpack .../232-r-cran-processx_3.8.5-1_ppc64el.deb ...
1325s Unpacking r-cran-processx (3.8.5-1) ...
1325s Selecting previously unselected package r-cran-callr.
1325s Preparing to unpack .../233-r-cran-callr_3.7.6-1_all.deb ...
1325s Unpacking r-cran-callr (3.7.6-1) ...
1325s Selecting previously unselected package r-cran-cluster.
1325s Preparing to unpack .../234-r-cran-cluster_2.1.8-1_ppc64el.deb ...
1325s Unpacking r-cran-cluster (2.1.8-1) ...
1325s Selecting previously unselected package r-cran-clue.
1325s Preparing to unpack .../235-r-cran-clue_0.3-66-1_ppc64el.deb ...
1325s Unpacking r-cran-clue (0.3-66-1) ...
1325s Selecting previously unselected package r-cran-codetools.
1325s Preparing to unpack .../236-r-cran-codetools_0.2-20-1_all.deb ...
1325s Unpacking r-cran-codetools (0.2-20-1) ...
1325s Selecting previously unselected package r-cran-collapse.
1325s Preparing to unpack .../237-r-cran-collapse_2.0.19-1_ppc64el.deb ...
1325s Unpacking r-cran-collapse (2.0.19-1) ...
1325s Selecting previously unselected package r-cran-colorspace.
1325s Preparing to unpack .../238-r-cran-colorspace_2.1-1+dfsg-1_ppc64el.deb ...
1325s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
1325s Selecting previously unselected package r-cran-commonmark.
1325s Preparing to unpack .../239-r-cran-commonmark_1.9.2-2_ppc64el.deb ...
1325s Unpacking r-cran-commonmark (1.9.2-2) ...
1325s Selecting previously unselected package r-cran-lazyeval.
1325s Preparing to unpack .../240-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ...
1325s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
1325s Selecting previously unselected package r-cran-rex.
1325s Preparing to unpack .../241-r-cran-rex_1.2.1-1_all.deb ...
1325s Unpacking r-cran-rex (1.2.1-1) ...
1325s Selecting previously unselected package r-cran-curl.
1325s Preparing to unpack .../242-r-cran-curl_6.1.0+dfsg-1_ppc64el.deb ...
1325s Unpacking r-cran-curl (6.1.0+dfsg-1) ...
1325s Selecting previously unselected package r-cran-openssl.
1325s Preparing to unpack .../243-r-cran-openssl_2.2.0+dfsg-1_ppc64el.deb ...
1325s Unpacking r-cran-openssl (2.2.0+dfsg-1) ...
1325s Selecting previously unselected package r-cran-httr.
1325s Preparing to unpack .../244-r-cran-httr_1.4.7+dfsg-1_all.deb ...
1325s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
1325s Selecting previously unselected package r-cran-crayon.
1325s Preparing to unpack .../245-r-cran-crayon_1.5.3-1_all.deb ...
1325s Unpacking r-cran-crayon (1.5.3-1) ...
1325s Selecting previously unselected package r-cran-yaml.
1325s Preparing to unpack .../246-r-cran-yaml_2.3.10-1_ppc64el.deb ...
1325s Unpacking r-cran-yaml (2.3.10-1) ...
1325s Selecting previously unselected package r-cran-covr.
1325s Preparing to unpack .../247-r-cran-covr_3.6.4+dfsg-1_ppc64el.deb ...
1325s Unpacking r-cran-covr (3.6.4+dfsg-1) ...
1325s Selecting previously unselected package r-cran-cpp11.
1325s Preparing to unpack .../248-r-cran-cpp11_0.5.1-1_all.deb ...
1325s Unpacking r-cran-cpp11 (0.5.1-1) ...
1325s Selecting previously unselected package r-cran-deldir.
1325s Preparing to unpack .../249-r-cran-deldir_2.0-4-1build1_ppc64el.deb ...
1325s Unpacking r-cran-deldir (2.0-4-1build1) ...
1325s Selecting previously unselected package r-cran-desc.
1325s Preparing to unpack .../250-r-cran-desc_1.4.3-1_all.deb ...
1325s Unpacking r-cran-desc (1.4.3-1) ...
1325s Selecting previously unselected package r-cran-diffobj.
1325s Preparing to unpack .../251-r-cran-diffobj_0.3.5-1_ppc64el.deb ...
1325s Unpacking r-cran-diffobj (0.3.5-1) ...
1325s Selecting previously unselected package r-cran-evaluate.
1325s Preparing to unpack .../252-r-cran-evaluate_1.0.3-1_all.deb ...
1325s Unpacking r-cran-evaluate (1.0.3-1) ...
1325s Selecting previously unselected package r-cran-farver.
1325s Preparing to unpack .../253-r-cran-farver_2.1.2-1_ppc64el.deb ...
1325s Unpacking r-cran-farver (2.1.2-1) ...
1326s Selecting previously unselected package r-cran-fnn.
1326s Preparing to unpack .../254-r-cran-fnn_1.1.4.1-1_ppc64el.deb ...
1326s Unpacking r-cran-fnn (1.1.4.1-1) ...
1326s Selecting previously unselected package r-cran-fontawesome.
1326s Preparing to unpack .../255-r-cran-fontawesome_0.5.3-1_all.deb ...
1326s Unpacking r-cran-fontawesome (0.5.3-1) ...
1326s Selecting previously unselected package r-cran-formula.
1326s Preparing to unpack .../256-r-cran-formula_1.2-5-1_all.deb ...
1326s Unpacking r-cran-formula (1.2-5-1) ...
1326s Selecting previously unselected package r-cran-globals.
1326s Preparing to unpack .../257-r-cran-globals_0.16.3-1_all.deb ...
1326s Unpacking r-cran-globals (0.16.3-1) ...
1326s Selecting previously unselected package r-cran-listenv.
1326s Preparing to unpack .../258-r-cran-listenv_0.9.1+dfsg-1_all.deb ...
1326s Unpacking r-cran-listenv (0.9.1+dfsg-1) ...
1326s Selecting previously unselected package r-cran-parallelly.
1326s Preparing to unpack .../259-r-cran-parallelly_1.41.0-1_ppc64el.deb ...
1326s Unpacking r-cran-parallelly (1.41.0-1) ...
1326s Selecting previously unselected package r-cran-future.
1326s Preparing to unpack .../260-r-cran-future_1.34.0+dfsg-1_all.deb ...
1326s Unpacking r-cran-future (1.34.0+dfsg-1) ...
1326s Selecting previously unselected package r-cran-future.apply.
1326s Preparing to unpack .../261-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
1326s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
1326s Selecting previously unselected package r-cran-gtable.
1326s Preparing to unpack .../262-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
1326s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
1326s Selecting previously unselected package r-cran-isoband.
1326s Preparing to unpack .../263-r-cran-isoband_0.2.7-1_ppc64el.deb ...
1326s Unpacking r-cran-isoband (0.2.7-1) ...
1326s Selecting previously unselected package r-cran-lattice.
1326s Preparing to unpack .../264-r-cran-lattice_0.22-6-1_ppc64el.deb ...
1326s Unpacking r-cran-lattice (0.22-6-1) ...
1326s Selecting previously unselected package r-cran-nlme.
1326s Preparing to unpack .../265-r-cran-nlme_3.1.167-1_ppc64el.deb ...
1326s Unpacking r-cran-nlme (3.1.167-1) ...
1326s Selecting previously unselected package r-cran-matrix.
1326s Preparing to unpack .../266-r-cran-matrix_1.7-2-1_ppc64el.deb ...
1326s Unpacking r-cran-matrix (1.7-2-1) ...
1326s Selecting previously unselected package r-cran-mgcv.
1326s Preparing to unpack .../267-r-cran-mgcv_1.9-1-1_ppc64el.deb ...
1326s Unpacking r-cran-mgcv (1.9-1-1) ...
1326s Selecting previously unselected package r-cran-labeling.
1326s Preparing to unpack .../268-r-cran-labeling_0.4.3-1_all.deb ...
1326s Unpacking r-cran-labeling (0.4.3-1) ...
1326s Selecting previously unselected package r-cran-munsell.
1326s Preparing to unpack .../269-r-cran-munsell_0.5.1-1_all.deb ...
1326s Unpacking r-cran-munsell (0.5.1-1) ...
1326s Selecting previously unselected package r-cran-rcolorbrewer.
1326s Preparing to unpack .../270-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
1326s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
1326s Selecting previously unselected package r-cran-viridislite.
1326s Preparing to unpack .../271-r-cran-viridislite_0.4.2-2_all.deb ...
1326s Unpacking r-cran-viridislite (0.4.2-2) ...
1326s Selecting previously unselected package r-cran-scales.
1326s Preparing to unpack .../272-r-cran-scales_1.3.0-1_all.deb ...
1326s Unpacking r-cran-scales (1.3.0-1) ...
1326s Selecting previously unselected package r-cran-ggplot2.
1326s Preparing to unpack .../273-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
1326s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
1326s Selecting previously unselected package r-cran-tweenr.
1326s Preparing to unpack .../274-r-cran-tweenr_2.0.3-1_ppc64el.deb ...
1326s Unpacking r-cran-tweenr (2.0.3-1) ...
1326s Selecting previously unselected package r-cran-polyclip.
1326s Preparing to unpack .../275-r-cran-polyclip_1.10-7-1_ppc64el.deb ...
1326s Unpacking r-cran-polyclip (1.10-7-1) ...
1327s Selecting previously unselected package r-cran-systemfonts.
1327s Preparing to unpack .../276-r-cran-systemfonts_1.2.1-1_ppc64el.deb ...
1327s Unpacking r-cran-systemfonts (1.2.1-1) ...
1327s Selecting previously unselected package r-cran-rcppeigen.
1327s Preparing to unpack .../277-r-cran-rcppeigen_0.3.4.0.2-1_ppc64el.deb ...
1327s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
1327s Selecting previously unselected package r-cran-ggforce.
1327s Preparing to unpack .../278-r-cran-ggforce_0.4.2-1_ppc64el.deb ...
1327s Unpacking r-cran-ggforce (0.4.2-1) ...
1327s Selecting previously unselected package r-cran-stringi.
1327s Preparing to unpack .../279-r-cran-stringi_1.8.4-1build1_ppc64el.deb ...
1327s Unpacking r-cran-stringi (1.8.4-1build1) ...
1327s Selecting previously unselected package r-cran-stringr.
1327s Preparing to unpack .../280-r-cran-stringr_1.5.1-1_all.deb ...
1327s Unpacking r-cran-stringr (1.5.1-1) ...
1327s Selecting previously unselected package r-cran-ggthemes.
1327s Preparing to unpack .../281-r-cran-ggthemes_5.1.0-1_all.deb ...
1327s Unpacking r-cran-ggthemes (5.1.0-1) ...
1327s Selecting previously unselected package r-cran-goftest.
1327s Preparing to unpack .../282-r-cran-goftest_1.2-3-1_ppc64el.deb ...
1327s Unpacking r-cran-goftest (1.2-3-1) ...
1327s Selecting previously unselected package r-cran-gridextra.
1327s Preparing to unpack .../283-r-cran-gridextra_2.3-3build1_all.deb ...
1327s Unpacking r-cran-gridextra (2.3-3build1) ...
1327s Selecting previously unselected package r-cran-xfun.
1327s Preparing to unpack .../284-r-cran-xfun_0.50+dfsg-1_ppc64el.deb ...
1327s Unpacking r-cran-xfun (0.50+dfsg-1) ...
1327s Selecting previously unselected package r-cran-highr.
1327s Preparing to unpack .../285-r-cran-highr_0.11+dfsg-1_all.deb ...
1327s Unpacking r-cran-highr (0.11+dfsg-1) ...
1327s Selecting previously unselected package r-cran-later.
1327s Preparing to unpack .../286-r-cran-later_1.4.1+dfsg-1_ppc64el.deb ...
1327s Unpacking r-cran-later (1.4.1+dfsg-1) ...
1327s Selecting previously unselected package r-cran-promises.
1327s Preparing to unpack .../287-r-cran-promises_1.3.2+dfsg-1_ppc64el.deb ...
1327s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
1327s Selecting previously unselected package r-cran-httpuv.
1327s Preparing to unpack .../288-r-cran-httpuv_1.6.15+dfsg-1_ppc64el.deb ...
1327s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
1327s Selecting previously unselected package r-cran-intervals.
1327s Preparing to unpack .../289-r-cran-intervals_0.15.5-1_ppc64el.deb ...
1327s Unpacking r-cran-intervals (0.15.5-1) ...
1327s Selecting previously unselected package libjs-mathjax.
1327s Preparing to unpack .../290-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
1327s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
1328s Selecting previously unselected package r-cran-knitr.
1328s Preparing to unpack .../291-r-cran-knitr_1.49+dfsg-1_all.deb ...
1328s Unpacking r-cran-knitr (1.49+dfsg-1) ...
1328s Selecting previously unselected package r-cran-zoo.
1328s Preparing to unpack .../292-r-cran-zoo_1.8-12-2_ppc64el.deb ...
1328s Unpacking r-cran-zoo (1.8-12-2) ...
1328s Selecting previously unselected package r-cran-lmtest.
1328s Preparing to unpack .../293-r-cran-lmtest_0.9.40-1_ppc64el.deb ...
1328s Unpacking r-cran-lmtest (0.9.40-1) ...
1328s Selecting previously unselected package r-cran-lwgeom.
1328s Preparing to unpack .../294-r-cran-lwgeom_0.2-14-1_ppc64el.deb ...
1328s Unpacking r-cran-lwgeom (0.2-14-1) ...
1328s Selecting previously unselected package r-cran-maps.
1328s Preparing to unpack .../295-r-cran-maps_3.4.2-1_ppc64el.deb ...
1328s Unpacking r-cran-maps (3.4.2-1) ...
1328s Selecting previously unselected package r-cran-mapdata.
1328s Preparing to unpack .../296-r-cran-mapdata_2.3.1-1_ppc64el.deb ...
1328s Unpacking r-cran-mapdata (2.3.1-1) ...
1329s Selecting previously unselected package r-cran-misctools.
1329s Preparing to unpack .../297-r-cran-misctools_0.6-28-1_all.deb ...
1329s Unpacking r-cran-misctools (0.6-28-1) ...
1329s Selecting previously unselected package r-cran-sandwich.
1329s Preparing to unpack .../298-r-cran-sandwich_3.1-1-1_all.deb ...
1329s Unpacking r-cran-sandwich (3.1-1-1) ...
1329s Selecting previously unselected package r-cran-maxlik.
1329s Preparing to unpack .../299-r-cran-maxlik_1.5-2.1-1_all.deb ...
1329s Unpacking r-cran-maxlik (1.5-2.1-1) ...
1329s Selecting previously unselected package r-cran-rnetcdf.
1329s Preparing to unpack .../300-r-cran-rnetcdf_2.9-1-1build2_ppc64el.deb ...
1329s Unpacking r-cran-rnetcdf (2.9-1-1build2) ...
1329s Selecting previously unselected package r-cran-tidyr.
1329s Preparing to unpack .../301-r-cran-tidyr_1.3.1-1_ppc64el.deb ...
1329s Unpacking r-cran-tidyr (1.3.1-1) ...
1329s Selecting previously unselected package r-cran-ncmeta.
1329s Preparing to unpack .../302-r-cran-ncmeta_0.3.6-1_all.deb ...
1329s Unpacking r-cran-ncmeta (0.3.6-1) ...
1329s Selecting previously unselected package r-cran-stars.
1329s Preparing to unpack .../303-r-cran-stars_0.6-7-1_all.deb ...
1329s Unpacking r-cran-stars (0.6-7-1) ...
1329s Selecting previously unselected package r-cran-ncdfgeom.
1329s Preparing to unpack .../304-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ...
1329s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ...
1329s Selecting previously unselected package r-cran-pbapply.
1329s Preparing to unpack .../305-r-cran-pbapply_1.7-2-1_all.deb ...
1329s Unpacking r-cran-pbapply (1.7-2-1) ...
1329s Selecting previously unselected package r-cran-pcict.
1329s Preparing to unpack .../306-r-cran-pcict_0.5-4.4-1_ppc64el.deb ...
1329s Unpacking r-cran-pcict (0.5-4.4-1) ...
1329s Selecting previously unselected package r-cran-pkgbuild.
1329s Preparing to unpack .../307-r-cran-pkgbuild_1.4.6-1_all.deb ...
1329s Unpacking r-cran-pkgbuild (1.4.6-1) ...
1329s Selecting previously unselected package r-cran-rprojroot.
1329s Preparing to unpack .../308-r-cran-rprojroot_2.0.4-2_all.deb ...
1329s Unpacking r-cran-rprojroot (2.0.4-2) ...
1329s Selecting previously unselected package r-cran-pkgload.
1329s Preparing to unpack .../309-r-cran-pkgload_1.4.0-1_all.deb ...
1329s Unpacking r-cran-pkgload (1.4.0-1) ...
1329s Selecting previously unselected package r-cran-rbibutils.
1329s Preparing to unpack .../310-r-cran-rbibutils_2.3-1_ppc64el.deb ...
1329s Unpacking r-cran-rbibutils (2.3-1) ...
1329s Selecting previously unselected package r-cran-rdpack.
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1329s Unpacking r-cran-rdpack (2.6.2-1) ...
1329s Selecting previously unselected package r-cran-plm.
1329s Preparing to unpack .../312-r-cran-plm_2.6-5-1_all.deb ...
1329s Unpacking r-cran-plm (2.6-5-1) ...
1329s Selecting previously unselected package r-cran-praise.
1329s Preparing to unpack .../313-r-cran-praise_1.0.0-4build1_all.deb ...
1329s Unpacking r-cran-praise (1.0.0-4build1) ...
1329s Selecting previously unselected package r-cran-randomforest.
1329s Preparing to unpack .../314-r-cran-randomforest_4.7-1.2-1_ppc64el.deb ...
1329s Unpacking r-cran-randomforest (4.7-1.2-1) ...
1329s Selecting previously unselected package r-cran-sp.
1329s Preparing to unpack .../315-r-cran-sp_1%3a2.1-4+dfsg-1_ppc64el.deb ...
1329s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ...
1329s Selecting previously unselected package r-cran-terra.
1329s Preparing to unpack .../316-r-cran-terra_1.8-10-1_ppc64el.deb ...
1329s Unpacking r-cran-terra (1.8-10-1) ...
1329s Selecting previously unselected package r-cran-raster.
1329s Preparing to unpack .../317-r-cran-raster_3.6-31-1_ppc64el.deb ...
1329s Unpacking r-cran-raster (3.6-31-1) ...
1330s Selecting previously unselected package r-cran-tinytex.
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1330s Unpacking r-cran-tinytex (0.54-1) ...
1330s Selecting previously unselected package libjs-modernizr.
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1330s Unpacking libjs-modernizr (3.13.0-0.1) ...
1330s Selecting previously unselected package r-cran-xtable.
1330s Preparing to unpack .../320-r-cran-xtable_1%3a1.8-4-2_all.deb ...
1330s Unpacking r-cran-xtable (1:1.8-4-2) ...
1330s Selecting previously unselected package r-cran-sourcetools.
1330s Preparing to unpack .../321-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ...
1330s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
1330s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
1330s Preparing to unpack .../322-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
1330s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
1330s Selecting previously unselected package r-cran-shiny.
1330s Preparing to unpack .../323-r-cran-shiny_1.9.1+dfsg-1_all.deb ...
1330s Unpacking r-cran-shiny (1.9.1+dfsg-1) ...
1330s Selecting previously unselected package r-cran-rmarkdown.
1330s Preparing to unpack .../324-r-cran-rmarkdown_2.29+dfsg-1_all.deb ...
1330s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ...
1330s Selecting previously unselected package r-cran-survival.
1330s Preparing to unpack .../325-r-cran-survival_3.8-3-1_ppc64el.deb ...
1330s Unpacking r-cran-survival (3.8-3-1) ...
1330s Selecting previously unselected package r-cran-rpart.
1330s Preparing to unpack .../326-r-cran-rpart_4.1.24-1_ppc64el.deb ...
1330s Unpacking r-cran-rpart (4.1.24-1) ...
1330s Selecting previously unselected package r-cran-xts.
1330s Preparing to unpack .../327-r-cran-xts_0.14.1-1_ppc64el.deb ...
1330s Unpacking r-cran-xts (0.14.1-1) ...
1330s Selecting previously unselected package r-cran-spacetime.
1330s Preparing to unpack .../328-r-cran-spacetime_1.3-2-2_all.deb ...
1330s Unpacking r-cran-spacetime (1.3-2-2) ...
1330s Selecting previously unselected package r-cran-spatstat.utils.
1330s Preparing to unpack .../329-r-cran-spatstat.utils_3.1-2-1_ppc64el.deb ...
1330s Unpacking r-cran-spatstat.utils (3.1-2-1) ...
1330s Selecting previously unselected package r-cran-spatstat.data.
1330s Preparing to unpack .../330-r-cran-spatstat.data_3.1-4-1_all.deb ...
1330s Unpacking r-cran-spatstat.data (3.1-4-1) ...
1330s Selecting previously unselected package r-cran-spatstat.geom.
1330s Preparing to unpack .../331-r-cran-spatstat.geom_3.2-9-2_ppc64el.deb ...
1330s Unpacking r-cran-spatstat.geom (3.2-9-2) ...
1330s Selecting previously unselected package r-cran-spatstat.random.
1330s Preparing to unpack .../332-r-cran-spatstat.random_3.2-3-1_ppc64el.deb ...
1330s Unpacking r-cran-spatstat.random (3.2-3-1) ...
1330s Selecting previously unselected package r-cran-tensor.
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1330s Unpacking r-cran-tensor (1.5-4) ...
1331s Selecting previously unselected package r-cran-spatstat.sparse.
1331s Preparing to unpack .../334-r-cran-spatstat.sparse_3.1-0-1_ppc64el.deb ...
1331s Unpacking r-cran-spatstat.sparse (3.1-0-1) ...
1331s Selecting previously unselected package r-cran-spatstat.explore.
1331s Preparing to unpack .../335-r-cran-spatstat.explore_3.2-7-1_ppc64el.deb ...
1331s Unpacking r-cran-spatstat.explore (3.2-7-1) ...
1331s Selecting previously unselected package r-cran-spatstat.model.
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1331s Selecting previously unselected package r-cran-spatstat.linnet.
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1331s Selecting previously unselected package r-cran-spatstat.
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1331s Selecting previously unselected package r-cran-waldo.
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1331s Selecting previously unselected package r-cran-testthat.
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1331s Unpacking r-cran-testthat (3.2.3-1) ...
1331s Selecting previously unselected package r-cran-viridis.
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1331s Unpacking r-cran-viridis (0.6.5-1) ...
1331s Setting up libjs-json (0~20221030+~1.0.8-1) ...
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1331s Setting up liblcms2-2:ppc64el (2.16-2) ...
1331s Setting up libpixman-1-0:ppc64el (0.44.0-3) ...
1331s Setting up libsharpyuv0:ppc64el (1.5.0-0.1) ...
1331s Setting up libgpgmepp6t64:ppc64el (1.24.1-2ubuntu1) ...
1331s Setting up libaom3:ppc64el (3.11.0-1) ...
1331s Setting up mysql-common (5.8+1.1.1) ...
1331s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
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1331s Setting up unzip (6.0-28ubuntu6) ...
1331s Setting up libgeos3.13.0:ppc64el (3.13.0-1) ...
1331s Setting up x11-common (1:7.7+23ubuntu3) ...
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1332s Setting up libmysqlclient24:ppc64el (8.4.4-0ubuntu1) ...
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1332s Setting up libsnappy1v5:ppc64el (1.2.1-1) ...
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1332s Setting up libtirpc-dev:ppc64el (1.3.4+ds-1.3) ...
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1332s Setting up pkgconf-bin (1.8.1-4) ...
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1332s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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1334s Setting up gcc-14 (14.2.0-13ubuntu1) ...
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1334s Setting up gfortran-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ...
1334s Setting up r-base-core (4.4.2-1build1) ...
1334s Creating config file /etc/R/Renviron with new version
1335s Setting up r-cran-crayon (1.5.3-1) ...
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1335s Setting up r-cran-pbapply (1.7-2-1) ...
1335s Setting up r-cran-formula (1.2-5-1) ...
1335s Setting up r-cran-intervals (0.15.5-1) ...
1335s Setting up r-cran-spatstat.utils (3.1-2-1) ...
1335s Setting up g++ (4:14.1.0-2ubuntu1) ...
1335s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
1335s Setting up r-cran-viridislite (0.4.2-2) ...
1335s Setting up r-cran-cluster (2.1.8-1) ...
1335s Setting up build-essential (12.10ubuntu1) ...
1335s Setting up r-cran-tensor (1.5-4) ...
1335s Setting up r-cran-lazyeval (0.2.2-1build1) ...
1335s Setting up r-cran-wk (0.9.4-1) ...
1335s Setting up r-cran-commonmark (1.9.2-2) ...
1335s Setting up r-cran-proxy (0.4-27-1) ...
1335s Setting up r-cran-r6 (2.5.1-1) ...
1335s Setting up r-cran-pkgkitten (0.2.4-1) ...
1335s Setting up r-cran-magrittr (2.0.3-1) ...
1335s Setting up r-cran-rappdirs (0.3.3-1) ...
1335s Setting up r-cran-littler (0.3.20-2) ...
1335s Setting up r-cran-fs (1.6.5+dfsg-1) ...
1335s Setting up r-cran-rcpp (1.0.14-1) ...
1335s Setting up r-cran-curl (6.1.0+dfsg-1) ...
1335s Setting up r-cran-codetools (0.2-20-1) ...
1335s Setting up r-cran-brio (1.1.5-1) ...
1335s Setting up r-cran-diffobj (0.3.5-1) ...
1335s Setting up r-cran-maps (3.4.2-1) ...
1335s Setting up r-cran-rlang (1.1.5-1) ...
1335s Setting up r-cran-listenv (0.9.1+dfsg-1) ...
1335s Setting up littler (0.3.20-2) ...
1335s Setting up r-cran-xfun (0.50+dfsg-1) ...
1335s Setting up r-cran-sys (3.4.3-1) ...
1335s Setting up r-cran-withr (3.0.2+dfsg-1) ...
1335s Setting up r-cran-processx (3.8.5-1) ...
1335s Setting up r-cran-mime (0.12-2) ...
1335s Setting up r-cran-praise (1.0.0-4build1) ...
1335s Setting up r-cran-generics (0.1.3-1) ...
1335s Setting up r-cran-base64enc (0.1-3-3) ...
1335s Setting up r-cran-abind (1.4-8-1) ...
1335s Setting up r-cran-s2 (1.1.7-1) ...
1335s Setting up r-cran-digest (0.6.37-1) ...
1335s Setting up r-cran-yaml (2.3.10-1) ...
1335s Setting up r-cran-evaluate (1.0.3-1) ...
1335s Setting up r-cran-dbi (1.2.3-1) ...
1335s Setting up r-cran-highr (0.11+dfsg-1) ...
1335s Setting up r-cran-fansi (1.0.5-1) ...
1335s Setting up r-cran-pcict (0.5-4.4-1) ...
1335s Setting up r-cran-mass (7.3-64-1) ...
1335s Setting up r-cran-cairo (1.6-2-1) ...
1335s Setting up r-cran-mapdata (2.3.1-1) ...
1335s Setting up r-cran-collapse (2.0.19-1) ...
1335s Setting up r-cran-bdsmatrix (1.3-7-1) ...
1335s Setting up r-cran-glue (1.8.0-1) ...
1335s Setting up r-cran-xtable (1:1.8-4-2) ...
1335s Setting up r-cran-polyclip (1.10-7-1) ...
1335s Setting up r-cran-clue (0.3-66-1) ...
1335s Setting up r-cran-cli (3.6.3-1) ...
1335s Setting up gfortran (4:14.1.0-2ubuntu1) ...
1335s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
1335s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
1335s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
1335s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
1335s Setting up r-cran-rbibutils (2.3-1) ...
1335s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
1335s Setting up r-cran-rprojroot (2.0.4-2) ...
1335s Setting up r-cran-fnn (1.1.4.1-1) ...
1335s Setting up r-cran-deldir (2.0-4-1build1) ...
1335s Setting up r-cran-goftest (1.2-3-1) ...
1335s Setting up r-cran-randomforest (4.7-1.2-1) ...
1335s Setting up r-cran-askpass (1.2.1-1) ...
1335s Setting up r-cran-fastmap (1.2.0-1) ...
1335s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
1335s Setting up r-cran-rnetcdf (2.9-1-1build2) ...
1335s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
1335s Setting up r-cran-sp (1:2.1-4+dfsg-1) ...
1335s Setting up r-cran-utf8 (1.2.4-1) ...
1335s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
1335s Setting up r-cran-parallelly (1.41.0-1) ...
1335s Setting up r-cran-stringi (1.8.4-1build1) ...
1335s Setting up r-cran-rex (1.2.1-1) ...
1335s Setting up r-cran-cpp11 (0.5.1-1) ...
1335s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
1335s Setting up r-cran-isoband (0.2.7-1) ...
1335s Setting up r-cran-waldo (0.6.1-1) ...
1335s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
1335s Setting up r-cran-zoo (1.8-12-2) ...
1335s Setting up r-cran-units (0.8-5+dfsg-1) ...
1335s Setting up r-cran-later (1.4.1+dfsg-1) ...
1335s Setting up r-cran-matrix (1.7-2-1) ...
1335s Setting up r-cran-spatstat.sparse (3.1-0-1) ...
1335s Setting up r-cran-htmltools (0.5.8.1-1) ...
1335s Setting up r-cran-tinytex (0.54-1) ...
1335s Setting up r-cran-kernsmooth (2.23-26-1) ...
1335s Setting up r-cran-knitr (1.49+dfsg-1) ...
1335s Setting up r-cran-mgcv (1.9-1-1) ...
1335s Setting up r-cran-cachem (1.1.0-1) ...
1335s Setting up r-cran-lmtest (0.9.40-1) ...
1335s Setting up r-cran-sass (0.4.9+dfsg-1) ...
1335s Setting up r-cran-globals (0.16.3-1) ...
1335s Setting up r-cran-vctrs (0.6.5-1) ...
1335s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
1335s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
1335s Setting up r-cran-openssl (2.2.0+dfsg-1) ...
1335s Setting up r-base-dev (4.4.2-1build1) ...
1335s Setting up r-cran-misctools (0.6-28-1) ...
1335s Setting up r-cran-stringr (1.5.1-1) ...
1335s Setting up r-cran-class (7.3-23-1) ...
1335s Setting up r-cran-callr (3.7.6-1) ...
1335s Setting up r-cran-desc (1.4.3-1) ...
1335s Setting up r-cran-munsell (0.5.1-1) ...
1335s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
1335s Setting up r-cran-sandwich (3.1-1-1) ...
1335s Setting up r-cran-fontawesome (0.5.3-1) ...
1335s Setting up r-cran-survival (3.8-3-1) ...
1335s Setting up r-cran-xts (0.14.1-1) ...
1335s Setting up r-cran-rdpack (2.6.2-1) ...
1335s Setting up r-cran-tweenr (2.0.3-1) ...
1335s Setting up r-cran-future (1.34.0+dfsg-1) ...
1335s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
1335s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
1335s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
1335s Setting up r-cran-systemfonts (1.2.1-1) ...
1335s Setting up r-cran-httr (1.4.7+dfsg-1) ...
1335s Setting up r-cran-gridextra (2.3-3build1) ...
1335s Setting up r-cran-scales (1.3.0-1) ...
1335s Setting up r-cran-memoise (2.0.1-1) ...
1335s Setting up r-cran-covr (3.6.4+dfsg-1) ...
1335s Setting up r-cran-promises (1.3.2+dfsg-1) ...
1335s Setting up r-cran-purrr (1.0.2-1) ...
1335s Setting up r-cran-e1071 (1.7-16-1) ...
1335s Setting up r-cran-spatstat.data (3.1-4-1) ...
1335s Setting up r-cran-maxlik (1.5-2.1-1) ...
1335s Setting up r-cran-spacetime (1.3-2-2) ...
1335s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
1335s Setting up r-cran-spatstat.geom (3.2-9-2) ...
1335s Setting up r-cran-pkgbuild (1.4.6-1) ...
1335s Setting up r-cran-dplyr (1.1.4-4) ...
1335s Setting up r-cran-pkgload (1.4.0-1) ...
1335s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
1335s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
1335s Setting up r-cran-rpart (4.1.24-1) ...
1335s Setting up r-cran-spatstat.random (3.2-3-1) ...
1335s Setting up r-cran-plm (2.6-5-1) ...
1335s Setting up r-cran-viridis (0.6.5-1) ...
1335s Setting up r-cran-testthat (3.2.3-1) ...
1335s Setting up r-cran-classint (0.4-11+dfsg-1) ...
1335s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
1335s Setting up r-cran-spatstat.explore (3.2-7-1) ...
1335s Setting up r-cran-ggthemes (5.1.0-1) ...
1335s Setting up r-cran-tidyr (1.3.1-1) ...
1335s Setting up r-cran-ggforce (0.4.2-1) ...
1335s Setting up r-cran-spatstat.model (3.2-11-1) ...
1335s Setting up r-cran-shiny (1.9.1+dfsg-1) ...
1335s Setting up r-cran-ncmeta (0.3.6-1) ...
1335s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
1335s Setting up r-cran-spatstat.linnet (3.1-5-1) ...
1335s Setting up r-cran-spatstat (3.0-8-1) ...
1335s Setting up libheif-plugin-aomdec:ppc64el (1.19.5-1build1) ...
1335s Setting up libheif-plugin-libde265:ppc64el (1.19.5-1build1) ...
1335s Setting up libheif1:ppc64el (1.19.5-1build1) ...
1335s Setting up libgdal36:ppc64el (3.10.1+dfsg-1build2) ...
1335s Setting up r-cran-sf (1.0-19+dfsg-1) ...
1335s Setting up r-cran-stars (0.6-7-1) ...
1335s Setting up r-cran-areal (0.1.8+dfsg-2) ...
1335s Setting up r-cran-lwgeom (0.2-14-1) ...
1335s Setting up r-cran-terra (1.8-10-1) ...
1335s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ...
1335s Setting up r-cran-raster (3.6-31-1) ...
1335s Processing triggers for install-info (7.1.1-1) ...
1335s Processing triggers for libc-bin (2.40-4ubuntu1) ...
1335s Processing triggers for man-db (2.13.0-1) ...
1342s autopkgtest [10:32:43]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
1342s autopkgtest [10:32:43]: test pkg-r-autopkgtest: [-----------------------
1342s Test: Try to load the R library stars
1342s 
1342s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
1342s Copyright (C) 2024 The R Foundation for Statistical Computing
1342s Platform: powerpc64le-unknown-linux-gnu
1342s 
1342s R is free software and comes with ABSOLUTELY NO WARRANTY.
1342s You are welcome to redistribute it under certain conditions.
1342s Type 'license()' or 'licence()' for distribution details.
1342s 
1342s R is a collaborative project with many contributors.
1342s Type 'contributors()' for more information and
1342s 'citation()' on how to cite R or R packages in publications.
1342s 
1342s Type 'demo()' for some demos, 'help()' for on-line help, or
1342s 'help.start()' for an HTML browser interface to help.
1342s Type 'q()' to quit R.
1342s 
1342s > library('stars')
1342s Loading required package: abind
1342s Loading required package: sf
1343s Linking to GEOS 3.13.0, GDAL 3.10.1, PROJ 9.5.1; sf_use_s2() is TRUE
1343s > 
1343s > 
1343s Other tests are currently unsupported!
1343s They will be progressively added.
1343s autopkgtest [10:32:44]: test pkg-r-autopkgtest: -----------------------]
1344s autopkgtest [10:32:45]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
1344s pkg-r-autopkgtest    PASS
1344s autopkgtest [10:32:45]: @@@@@@@@@@@@@@@@@@@@ summary
1344s run-unit-test        PASS
1344s pkg-r-autopkgtest    PASS
1351s nova [W] Timed out waiting for 514b95f6-9932-4469-9138-292ef89e0653 to get deleted.
1351s nova [W] Using flock in prodstack6-ppc64el
1351s Creating nova instance adt-plucky-ppc64el-r-cran-stars-20250204-101021-juju-7f2275-prod-proposed-migration-environment-15-b7714107-8151-4df5-9e44-f482c39a9a6b from image adt/ubuntu-plucky-ppc64el-server-20250203.img (UUID 0c217399-b3be-4a44-a7da-172b7e7687e2)...
1351s nova [W] Timed out waiting for 35ba0531-c657-45f9-8838-00b618825383 to get deleted.