0s autopkgtest [05:03:32]: starting date and time: 2024-11-02 05:03:32+0000 0s autopkgtest [05:03:32]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [05:03:32]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0biinzcd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-httr2 --apt-upgrade r-bioc-rcpi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-httr2/1.0.5-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-ppc64el-19.secgroup --name adt-plucky-ppc64el-r-bioc-rcpi-20241102-050332-juju-7f2275-prod-proposed-migration-environment-2-3b639d10-d0ed-487a-a166-9f38bcc54870 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 97s autopkgtest [05:05:09]: testbed dpkg architecture: ppc64el 97s autopkgtest [05:05:09]: testbed apt version: 2.9.8 97s autopkgtest [05:05:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 98s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 98s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [172 kB] 99s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2604 kB] 99s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.0 kB] 99s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 99s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [211 kB] 99s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [1796 kB] 99s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [47.5 kB] 100s Fetched 4952 kB in 1s (3425 kB/s) 100s Reading package lists... 102s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s Calculating upgrade... 103s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 104s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 104s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 104s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 105s Reading package lists... 105s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s Calculating upgrade... 106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 109s autopkgtest [05:05:21]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 110s autopkgtest [05:05:22]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rcpi 112s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (dsc) [2212 B] 112s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (tar) [1494 kB] 112s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (diff) [6848 B] 112s gpgv: Signature made Sat Sep 7 12:10:31 2024 UTC 112s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 112s gpgv: Can't check signature: No public key 112s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rcpi_1.40.2+ds-1.dsc: no acceptable signature found 112s autopkgtest [05:05:24]: testing package r-bioc-rcpi version 1.40.2+ds-1 113s autopkgtest [05:05:25]: build not needed 115s autopkgtest [05:05:27]: test pkg-r-autopkgtest: preparing testbed 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 116s Starting pkgProblemResolver with broken count: 1 116s Starting 2 pkgProblemResolver with broken count: 1 116s Investigating (0) r-cran-httr2:ppc64el < none -> 1.0.5-1 @un puN Ib > 116s Broken r-cran-httr2:ppc64el Depends on r-cran-curl:ppc64el < none -> 5.2.1+dfsg-1 @un puN > (>= 5.2.2) 116s Done 116s Some packages could not be installed. This may mean that you have 116s requested an impossible situation or if you are using the unstable 116s distribution that some required packages have not yet been created 116s or been moved out of Incoming. 116s The following information may help to resolve the situation: 116s 116s The following packages have unmet dependencies: 117s r-cran-httr2 : Depends: r-cran-curl (>= 5.2.2) but 5.2.1+dfsg-1 is to be installed 117s E: Unable to correct problems, you have held broken packages. 117s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s Starting pkgProblemResolver with broken count: 3 118s Starting 2 pkgProblemResolver with broken count: 3 118s Investigating (0) r-base-dev:ppc64el < none -> 4.4.2-1 @un puN Ib > 118s Broken r-base-dev:ppc64el Depends on r-base-core:ppc64el < none -> 4.4.1-1 @un puN > (>= 4.4.2-1) 118s Broken r-base-dev:ppc64el Depends on build-essential:ppc64el < none | 12.10ubuntu1 @un umH > 118s Considering build-essential:ppc64el 2 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libisl23:ppc64el 118s Re-Instated libmpc3:ppc64el 118s Re-Instated cpp-14-powerpc64le-linux-gnu:ppc64el 118s Re-Instated cpp-14:ppc64el 118s Re-Instated cpp-powerpc64le-linux-gnu:ppc64el 118s Re-Instated cpp:ppc64el 118s Re-Instated libcc1-0:ppc64el 118s Re-Instated libitm1:ppc64el 118s Re-Instated libasan8:ppc64el 118s Re-Instated liblsan0:ppc64el 118s Re-Instated libtsan2:ppc64el 118s Re-Instated libubsan1:ppc64el 118s Re-Instated libquadmath0:ppc64el 118s Re-Instated libgcc-14-dev:ppc64el 118s Re-Instated gcc-14-powerpc64le-linux-gnu:ppc64el 118s Re-Instated gcc-14:ppc64el 118s Re-Instated gcc-powerpc64le-linux-gnu:ppc64el 118s Re-Instated gcc:ppc64el 118s Re-Instated libstdc++-14-dev:ppc64el 118s Re-Instated g++-14-powerpc64le-linux-gnu:ppc64el 118s Re-Instated g++-14:ppc64el 118s Re-Instated g++-powerpc64le-linux-gnu:ppc64el 118s Re-Instated g++:ppc64el 118s Re-Instated build-essential:ppc64el 118s Broken r-base-dev:ppc64el Depends on gfortran:ppc64el < none | 4:14.1.0-2ubuntu1 @un uH > 118s Considering gfortran:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libgfortran-14-dev:ppc64el 118s Re-Instated gfortran-14-powerpc64le-linux-gnu:ppc64el 118s Re-Instated gfortran-14:ppc64el 118s Re-Instated gfortran-powerpc64le-linux-gnu:ppc64el 118s Re-Instated gfortran:ppc64el 118s Broken r-base-dev:ppc64el Depends on libblas-dev:ppc64el < none | 3.12.0-3build2 @un uH > 118s Considering libblas-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libblas-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on liblapack-dev:ppc64el < none | 3.12.0-3build2 @un uH > 118s Considering liblapack-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated liblapack-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libncurses-dev:ppc64el < none | 6.5-2 @un uH > 118s Considering libncurses-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libncurses-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libreadline-dev:ppc64el < none | 8.2-5 @un uH > 118s Considering libreadline-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libreadline-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libjpeg-dev:ppc64el < none | 8c-2ubuntu11 @un uH > 118s Considering libjpeg-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libjpeg-turbo8-dev:ppc64el 118s Re-Instated libjpeg8-dev:ppc64el 118s Re-Instated libjpeg-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libpcre2-dev:ppc64el < none | 10.42-4ubuntu3 @un uH > 118s Considering libpcre2-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libpcre2-16-0:ppc64el 118s Re-Instated libpcre2-32-0:ppc64el 118s Re-Instated libpcre2-posix3:ppc64el 118s Re-Instated libpcre2-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libpng-dev:ppc64el < none | 1.6.44-2 @un uH > 118s Considering libpng-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libpng16-16t64:ppc64el 118s Re-Instated libpng-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libbz2-dev:ppc64el < none | 1.0.8-6 @un uH > 118s Considering libbz2-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libbz2-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on liblzma-dev:ppc64el < none | 5.6.3-1 @un uH > 118s Considering liblzma-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated liblzma5:ppc64el 118s Re-Instated liblzma-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libicu-dev:ppc64el < none | 74.2-1ubuntu4 @un uH > 118s Considering libicu-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated icu-devtools:ppc64el 118s Re-Instated libicu-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libtirpc-dev:ppc64el < none | 1.3.4+ds-1.3 @un uH > 118s Considering libtirpc-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libtirpc-dev:ppc64el 118s Broken r-base-dev:ppc64el Depends on libdeflate-dev:ppc64el < none | 1.22-1 @un uH > 118s Considering libdeflate-dev:ppc64el 1 as a solution to r-base-dev:ppc64el 115 118s Re-Instated libdeflate-dev:ppc64el 118s Investigating (0) r-cran-shiny:ppc64el < none -> 1.9.1+dfsg-1 @un puN Ib > 118s Broken r-cran-shiny:ppc64el Depends on r-cran-httpuv:ppc64el < none | 1.6.15+dfsg-1 @un uH > (>= 1.5.2) 118s Considering r-cran-httpuv:ppc64el 2 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated r-cran-later:ppc64el 118s Re-Instated r-cran-promises:ppc64el 118s Re-Instated r-cran-httpuv:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on r-cran-xtable:ppc64el < none | 1:1.8-4-2 @un uH > 118s Considering r-cran-xtable:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated r-cran-xtable:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on r-cran-sourcetools:ppc64el < none | 0.1.7-1-1 @un uH > 118s Considering r-cran-sourcetools:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated r-cran-sourcetools:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on r-cran-commonmark:ppc64el < none | 1.9.1-1 @un uH > (>= 1.7) 118s Considering r-cran-commonmark:ppc64el 0 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated r-cran-commonmark:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on r-cran-cachem:ppc64el < none -> 1.0.8-1 @un puN > (>= 1.1.0) 118s Broken r-cran-shiny:ppc64el Depends on libjs-json:ppc64el < none | 0~20221030+~1.0.8-1 @un uH > 118s Considering libjs-json:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated libjs-json:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on libjs-es5-shim:ppc64el < none | 4.6.7-2 @un uH > 118s Considering libjs-es5-shim:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated libjs-es5-shim:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on libjs-twitter-bootstrap-datepicker:ppc64el < none | 1.3.1+dfsg1-4.1 @un uH > 118s Considering libjs-twitter-bootstrap-datepicker:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated libjs-twitter-bootstrap-datepicker:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on libjs-jquery-selectize.js:ppc64el < none | 0.12.6+dfsg-1.1 @un uH > 118s Considering libjs-jquery-selectize.js:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated libjs-sifter.js:ppc64el 118s Re-Instated libjs-microplugin.js:ppc64el 118s Re-Instated libjs-jquery-selectize.js:ppc64el 118s Broken r-cran-shiny:ppc64el Depends on libjs-d3:ppc64el < none | 3.5.17-4 @un uH > 118s Considering libjs-d3:ppc64el 1 as a solution to r-cran-shiny:ppc64el 114 118s Re-Instated libjs-d3:ppc64el 118s Investigating (0) r-cran-httr2:ppc64el < none -> 1.0.5-1 @un puN Ib > 118s Broken r-cran-httr2:ppc64el Depends on r-cran-curl:ppc64el < none -> 5.2.1+dfsg-1 @un puN > (>= 5.2.2) 118s Done 118s Some packages could not be installed. This may mean that you have 118s requested an impossible situation or if you are using the unstable 118s distribution that some required packages have not yet been created 118s or been moved out of Incoming. 118s The following information may help to resolve the situation: 118s 118s The following packages have unmet dependencies: 118s r-base-dev : Depends: r-base-core (>= 4.4.2-1) but 4.4.1-1 is to be installed 118s r-cran-httr2 : Depends: r-cran-curl (>= 5.2.2) but 5.2.1+dfsg-1 is to be installed 118s r-cran-shiny : Depends: r-cran-cachem (>= 1.1.0) but 1.0.8-1 is to be installed 118s E: Unable to correct problems, you have held broken packages. 118s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 118s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 118s autopkgtest [05:05:30]: @@@@@@@@@@@@@@@@@@@@ summary 118s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 132s nova [W] Using flock in prodstack6-ppc64el 132s Creating nova instance adt-plucky-ppc64el-r-bioc-rcpi-20241102-050332-juju-7f2275-prod-proposed-migration-environment-2-3b639d10-d0ed-487a-a166-9f38bcc54870 from image adt/ubuntu-plucky-ppc64el-server-20241102.img (UUID 6c75d7ee-3b45-4c3b-9217-03e6a1e48086)...