0s autopkgtest [23:40:09]: starting date and time: 2024-11-13 23:40:09+0000 0s autopkgtest [23:40:09]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [23:40:09]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kkwvftwd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-skbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-ppc64el-9.secgroup --name adt-plucky-ppc64el-python-skbio-20241113-234009-juju-7f2275-prod-proposed-migration-environment-20-d22db9cf-c04e-43a3-bfe8-5de75c6420b5 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 136s autopkgtest [23:42:25]: testbed dpkg architecture: ppc64el 136s autopkgtest [23:42:25]: testbed apt version: 2.9.8 136s autopkgtest [23:42:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 137s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 137s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 137s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 137s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [971 kB] 137s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [110 kB] 137s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [692 kB] 137s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [20.8 kB] 138s Fetched 1993 kB in 1s (1985 kB/s) 138s Reading package lists... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 141s Calculating upgrade... 141s The following NEW packages will be installed: 141s python3.13-gdbm 141s The following packages will be upgraded: 141s bpfcc-tools bpftrace libbpfcc libgnutls30t64 libjson-glib-1.0-0 141s libjson-glib-1.0-common libnewt0.52 libpython3-stdlib libutempter0 python3 141s python3-bpfcc python3-gdbm python3-minimal python3-newt whiptail 141s 15 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 141s Need to get 4700 kB of archives. 141s After this operation, 215 kB of additional disk space will be used. 141s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-minimal ppc64el 3.12.7-1 [27.4 kB] 141s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3 ppc64el 3.12.7-1 [24.0 kB] 141s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-stdlib ppc64el 3.12.7-1 [10.0 kB] 141s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgnutls30t64 ppc64el 3.8.8-2ubuntu1 [1072 kB] 142s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-newt ppc64el 0.52.24-2ubuntu4 [21.8 kB] 142s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el libnewt0.52 ppc64el 0.52.24-2ubuntu4 [62.1 kB] 142s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el whiptail ppc64el 0.52.24-2ubuntu4 [19.5 kB] 142s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-gdbm ppc64el 3.13.0-2 [31.5 kB] 142s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-gdbm ppc64el 3.12.7-1 [8640 B] 142s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libbpfcc ppc64el 0.30.0+ds-1ubuntu5 [696 kB] 142s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-bpfcc all 0.30.0+ds-1ubuntu5 [40.4 kB] 142s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpfcc-tools all 0.30.0+ds-1ubuntu5 [697 kB] 143s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpftrace ppc64el 0.21.2-2ubuntu2 [1898 kB] 143s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 143s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-0 ppc64el 1.10.0+ds-3 [76.0 kB] 143s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libutempter0 ppc64el 1.2.1-4 [9850 B] 143s Fetched 4700 kB in 2s (2324 kB/s) 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 144s Preparing to unpack .../python3-minimal_3.12.7-1_ppc64el.deb ... 144s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 144s Setting up python3-minimal (3.12.7-1) ... 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 144s Preparing to unpack .../python3_3.12.7-1_ppc64el.deb ... 144s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 144s Preparing to unpack .../libpython3-stdlib_3.12.7-1_ppc64el.deb ... 144s Unpacking libpython3-stdlib:ppc64el (3.12.7-1) over (3.12.6-0ubuntu1) ... 144s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_ppc64el.deb ... 144s Unpacking libgnutls30t64:ppc64el (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 144s Setting up libgnutls30t64:ppc64el (3.8.8-2ubuntu1) ... 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 144s Preparing to unpack .../00-python3-newt_0.52.24-2ubuntu4_ppc64el.deb ... 144s Unpacking python3-newt:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 144s Preparing to unpack .../01-libnewt0.52_0.52.24-2ubuntu4_ppc64el.deb ... 144s Unpacking libnewt0.52:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 144s Preparing to unpack .../02-whiptail_0.52.24-2ubuntu4_ppc64el.deb ... 144s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 144s Selecting previously unselected package python3.13-gdbm. 144s Preparing to unpack .../03-python3.13-gdbm_3.13.0-2_ppc64el.deb ... 144s Unpacking python3.13-gdbm (3.13.0-2) ... 144s Preparing to unpack .../04-python3-gdbm_3.12.7-1_ppc64el.deb ... 144s Unpacking python3-gdbm:ppc64el (3.12.7-1) over (3.12.6-1ubuntu1) ... 144s Preparing to unpack .../05-libbpfcc_0.30.0+ds-1ubuntu5_ppc64el.deb ... 144s Unpacking libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 144s Preparing to unpack .../06-python3-bpfcc_0.30.0+ds-1ubuntu5_all.deb ... 144s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 144s Preparing to unpack .../07-bpfcc-tools_0.30.0+ds-1ubuntu5_all.deb ... 144s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 144s Preparing to unpack .../08-bpftrace_0.21.2-2ubuntu2_ppc64el.deb ... 144s Unpacking bpftrace (0.21.2-2ubuntu2) over (0.21.2-2) ... 145s Preparing to unpack .../09-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 145s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 145s Preparing to unpack .../10-libjson-glib-1.0-0_1.10.0+ds-3_ppc64el.deb ... 145s Unpacking libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) over (1.10.0+ds-2) ... 145s Preparing to unpack .../11-libutempter0_1.2.1-4_ppc64el.deb ... 145s Unpacking libutempter0:ppc64el (1.2.1-4) over (1.2.1-3build1) ... 145s Setting up libnewt0.52:ppc64el (0.52.24-2ubuntu4) ... 145s Setting up libutempter0:ppc64el (1.2.1-4) ... 145s Setting up whiptail (0.52.24-2ubuntu4) ... 145s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 145s Setting up libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) ... 145s Setting up python3.13-gdbm (3.13.0-2) ... 145s Setting up libpython3-stdlib:ppc64el (3.12.7-1) ... 145s Setting up bpftrace (0.21.2-2ubuntu2) ... 145s Setting up python3 (3.12.7-1) ... 145s Setting up python3-newt:ppc64el (0.52.24-2ubuntu4) ... 145s Setting up libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) ... 145s Setting up python3-bpfcc (0.30.0+ds-1ubuntu5) ... 145s Setting up python3-gdbm:ppc64el (3.12.7-1) ... 145s Setting up bpfcc-tools (0.30.0+ds-1ubuntu5) ... 145s Processing triggers for man-db (2.12.1-3) ... 146s Processing triggers for libc-bin (2.40-1ubuntu3) ... 146s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 147s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 147s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 147s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 148s Reading package lists... 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Calculating upgrade... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 152s autopkgtest [23:42:41]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 152s autopkgtest [23:42:41]: @@@@@@@@@@@@@@@@@@@@ apt-source python-skbio 155s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-skbio 0.6.2-3 (dsc) [2897 B] 155s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-skbio 0.6.2-3 (tar) [2204 kB] 155s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-skbio 0.6.2-3 (diff) [11.1 kB] 155s gpgv: Signature made Sat Sep 28 10:29:34 2024 UTC 155s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 155s gpgv: Can't check signature: No public key 155s dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.6.2-3.dsc: no acceptable signature found 155s autopkgtest [23:42:44]: testing package python-skbio version 0.6.2-3 156s autopkgtest [23:42:45]: build not needed 157s autopkgtest [23:42:46]: test pybuild-autopkgtest: preparing testbed 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s Starting pkgProblemResolver with broken count: 0 159s Starting 2 pkgProblemResolver with broken count: 0 159s Done 160s The following additional packages will be installed: 160s architecture-properties autoconf automake autopoint autotools-dev blt 160s build-essential cpp cpp-14 cpp-14-powerpc64le-linux-gnu 160s cpp-powerpc64le-linux-gnu cython3 debhelper debugedit dh-autoreconf 160s dh-python dh-strip-nondeterminism docutils-common dwz fontconfig-config 160s fonts-dejavu-core fonts-dejavu-mono fonts-lyx fonts-mathjax fonts-open-sans 160s g++ g++-14 g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-14 160s gcc-14-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gettext 160s intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 libcc1-0 160s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 160s libfontconfig1 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 160s libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libisl23 160s libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 160s libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 160s liblbfgsb0 liblcms2-2 liblerc4 liblsan0 liblzf1 libmpc3 libopenjp2-7 160s libpython3-all-dev libpython3-dev libpython3.12-dev libpython3.13 160s libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 160s libquadmath0 libraqm0 libsharpyuv0 libsimde-dev libssw-dev libssw0 160s libstdc++-14-dev libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libtsan2 160s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 160s libxss1 m4 po-debconf pybuild-plugin-autopkgtest python-biom-format-doc 160s python-matplotlib-data python-numpy-doc python-pandas-doc python-scipy-doc 160s python-skbio-doc python3-alabaster python3-all python3-all-dev 160s python3-appdirs python3-asttokens python3-biom-format python3-brotli 160s python3-bs4 python3-cachecontrol python3-click python3-colorama 160s python3-contourpy python3-cycler python3-dateutil python3-decorator 160s python3-defusedxml python3-dev python3-doc python3-docutils 160s python3-executing python3-fonttools python3-fs python3-h5py 160s python3-h5py-serial python3-hdmedians python3-imagesize python3-iniconfig 160s python3-ipython python3-jedi python3-joblib python3-kiwisolver python3-lxml 160s python3-lz4 python3-matplotlib python3-matplotlib-inline python3-mpmath 160s python3-msgpack python3-natsort python3-numpy python3-numpydoc 160s python3-packaging python3-pandas python3-pandas-lib python3-parso 160s python3-patsy python3-pexpect python3-pil python3-pil.imagetk python3-pluggy 160s python3-prompt-toolkit python3-ptyprocess python3-pure-eval 160s python3-pydata-sphinx-theme python3-pytest python3-roman python3-scipy 160s python3-six python3-skbio python3-sklearn python3-sklearn-lib 160s python3-snowballstemmer python3-soupsieve python3-sphinx 160s python3-sphinx-copybutton python3-sphinx-design python3-stack-data 160s python3-statsmodels python3-statsmodels-lib python3-sympy python3-tabulate 160s python3-threadpoolctl python3-tk python3-traitlets python3-typeshed 160s python3-tz python3-ufolib2 python3-wcwidth python3.12-dev python3.12-doc 160s python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk 160s sgml-base sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core 160s zlib1g-dev 160s Suggested packages: 160s autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales 160s cpp-14-doc cython-doc dh-make flit python3-build python3-installer 160s python3-wheel gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc 160s gdb-powerpc64le-linux-gnu gettext-doc libasprintf-dev libgettextpo-dev 160s libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc 160s liblcms2-utils libstdc++-14-doc tcl8.6 tk8.6 libtool-doc gfortran 160s | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python-imageio-doc 160s python-pytest-doc python-skimage-doc python-cycler-doc python3-examples 160s docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french 160s texlive-latex-base texlive-latex-recommended python-h5py-doc 160s python-ipython-doc python-joblib-doc python-lxml-doc cm-super-minimal dvipng 160s ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 160s librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi-cairo 160s python3-gobject python3-pyqt5 python3-sip python3-tornado 160s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 160s python-natsort-doc gfortran python-patsy-doc python-pexpect-doc 160s python-pil-doc python3-dap python-sklearn-doc python3-stemmer dvisvgm 160s fonts-freefont-otf imagemagick-6.q16 latexmk python3-sphinx-rtd-theme 160s sphinx-doc tex-gyre texlive-fonts-extra texlive-fonts-recommended 160s texlive-plain-generic python-sphinx-copybutton-doc python-statsmodels-doc 160s python-sympy-doc tix python3-tk-dbg python-traitlets-doc python3.13-venv 160s python3.13-doc binfmt-support sgml-base-doc 160s Recommended packages: 160s libarchive-cpio-perl javascript-common libjson-xs-perl libltdl-dev 160s libmail-sendmail-perl libpaper-utils python3-simplejson python3-psutil 160s python3-cssselect python3-html5lib python3-bottleneck python3-numexpr 160s python3-odf python3-openpyxl python3-tables python3-olefile 160s python3-accessible-pygments python3-cvxopt isympy-common 160s The following NEW packages will be installed: 160s architecture-properties autoconf automake autopkgtest-satdep autopoint 160s autotools-dev blt build-essential cpp cpp-14 cpp-14-powerpc64le-linux-gnu 160s cpp-powerpc64le-linux-gnu cython3 debhelper debugedit dh-autoreconf 160s dh-python dh-strip-nondeterminism docutils-common dwz fontconfig-config 160s fonts-dejavu-core fonts-dejavu-mono fonts-lyx fonts-mathjax fonts-open-sans 160s g++ g++-14 g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-14 160s gcc-14-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gettext 160s intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 libcc1-0 160s libdebhelper-perl libdeflate0 libexpat1-dev libfile-stripnondeterminism-perl 160s libfontconfig1 libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 160s libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libisl23 160s libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui 160s libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 160s liblbfgsb0 liblcms2-2 liblerc4 liblsan0 liblzf1 libmpc3 libopenjp2-7 160s libpython3-all-dev libpython3-dev libpython3.12-dev libpython3.13 160s libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 160s libquadmath0 libraqm0 libsharpyuv0 libsimde-dev libssw-dev libssw0 160s libstdc++-14-dev libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libtsan2 160s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 160s libxss1 m4 po-debconf pybuild-plugin-autopkgtest python-biom-format-doc 160s python-matplotlib-data python-numpy-doc python-pandas-doc python-scipy-doc 160s python-skbio-doc python3-alabaster python3-all python3-all-dev 160s python3-appdirs python3-asttokens python3-biom-format python3-brotli 160s python3-bs4 python3-cachecontrol python3-click python3-colorama 160s python3-contourpy python3-cycler python3-dateutil python3-decorator 160s python3-defusedxml python3-dev python3-doc python3-docutils 160s python3-executing python3-fonttools python3-fs python3-h5py 160s python3-h5py-serial python3-hdmedians python3-imagesize python3-iniconfig 160s python3-ipython python3-jedi python3-joblib python3-kiwisolver python3-lxml 160s python3-lz4 python3-matplotlib python3-matplotlib-inline python3-mpmath 160s python3-msgpack python3-natsort python3-numpy python3-numpydoc 160s python3-packaging python3-pandas python3-pandas-lib python3-parso 160s python3-patsy python3-pexpect python3-pil python3-pil.imagetk python3-pluggy 160s python3-prompt-toolkit python3-ptyprocess python3-pure-eval 160s python3-pydata-sphinx-theme python3-pytest python3-roman python3-scipy 160s python3-six python3-skbio python3-sklearn python3-sklearn-lib 160s python3-snowballstemmer python3-soupsieve python3-sphinx 160s python3-sphinx-copybutton python3-sphinx-design python3-stack-data 160s python3-statsmodels python3-statsmodels-lib python3-sympy python3-tabulate 160s python3-threadpoolctl python3-tk python3-traitlets python3-typeshed 160s python3-tz python3-ufolib2 python3-wcwidth python3.12-dev python3.12-doc 160s python3.12-tk python3.13 python3.13-dev python3.13-minimal python3.13-tk 160s sgml-base sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core 160s zlib1g-dev 160s 0 upgraded, 202 newly installed, 0 to remove and 0 not upgraded. 160s Need to get 220 MB/220 MB of archives. 160s After this operation, 1249 MB of additional disk space will be used. 160s Get:1 /tmp/autopkgtest.JvfSqh/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [984 B] 160s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-minimal ppc64el 3.13.0-2 [881 kB] 161s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-minimal ppc64el 3.13.0-2 [2302 kB] 161s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el sgml-base all 1.31 [11.4 kB] 161s Get:5 http://ftpmaster.internal/ubuntu plucky/universe ppc64el architecture-properties ppc64el 0.2.3 [2064 B] 161s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el m4 ppc64el 1.4.19-4build1 [278 kB] 161s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el autoconf all 2.72-3 [382 kB] 161s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el autotools-dev all 20220109.1 [44.9 kB] 161s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el automake all 1:1.16.5-1.3ubuntu1 [558 kB] 161s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el autopoint all 0.22.5-2 [616 kB] 161s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtcl8.6 ppc64el 8.6.15+dfsg-2 [1201 kB] 162s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 162s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 162s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig-config ppc64el 2.15.0-1.1ubuntu2 [37.4 kB] 162s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfontconfig1 ppc64el 2.15.0-1.1ubuntu2 [190 kB] 162s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 162s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 162s Get:18 http://ftpmaster.internal/ubuntu plucky/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB] 162s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 162s Get:20 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtk8.6 ppc64el 8.6.15-1 [942 kB] 162s Get:21 http://ftpmaster.internal/ubuntu plucky/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7build1 [784 kB] 162s Get:22 http://ftpmaster.internal/ubuntu plucky/main ppc64el blt ppc64el 2.5.3+dfsg-7build1 [4840 B] 162s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el libisl23 ppc64el 0.27-1 [882 kB] 162s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el libmpc3 ppc64el 1.3.1-1build2 [62.1 kB] 162s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [10.5 MB] 163s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-14 ppc64el 14.2.0-8ubuntu1 [1034 B] 163s Get:27 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [5456 B] 163s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el cpp ppc64el 4:14.1.0-2ubuntu1 [22.5 kB] 163s Get:29 http://ftpmaster.internal/ubuntu plucky/main ppc64el libcc1-0 ppc64el 14.2.0-8ubuntu1 [48.1 kB] 163s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-8ubuntu1 [161 kB] 163s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el libitm1 ppc64el 14.2.0-8ubuntu1 [31.9 kB] 163s Get:32 http://ftpmaster.internal/ubuntu plucky/main ppc64el libasan8 ppc64el 14.2.0-8ubuntu1 [2945 kB] 163s Get:33 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblsan0 ppc64el 14.2.0-8ubuntu1 [1322 kB] 163s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtsan2 ppc64el 14.2.0-8ubuntu1 [2695 kB] 163s Get:35 http://ftpmaster.internal/ubuntu plucky/main ppc64el libubsan1 ppc64el 14.2.0-8ubuntu1 [1191 kB] 163s Get:36 http://ftpmaster.internal/ubuntu plucky/main ppc64el libquadmath0 ppc64el 14.2.0-8ubuntu1 [158 kB] 163s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgcc-14-dev ppc64el 14.2.0-8ubuntu1 [1619 kB] 163s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [20.6 MB] 164s Get:39 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-14 ppc64el 14.2.0-8ubuntu1 [528 kB] 164s Get:40 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [1222 B] 164s Get:41 http://ftpmaster.internal/ubuntu plucky/main ppc64el gcc ppc64el 4:14.1.0-2ubuntu1 [5006 B] 164s Get:42 http://ftpmaster.internal/ubuntu plucky/main ppc64el libstdc++-14-dev ppc64el 14.2.0-8ubuntu1 [2673 kB] 164s Get:43 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14-powerpc64le-linux-gnu ppc64el 14.2.0-8ubuntu1 [12.0 MB] 164s Get:44 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-14 ppc64el 14.2.0-8ubuntu1 [19.9 kB] 164s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:14.1.0-2ubuntu1 [968 B] 164s Get:46 http://ftpmaster.internal/ubuntu plucky/main ppc64el g++ ppc64el 4:14.1.0-2ubuntu1 [1090 B] 164s Get:47 http://ftpmaster.internal/ubuntu plucky/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 164s Get:48 http://ftpmaster.internal/ubuntu plucky/universe ppc64el cython3 ppc64el 3.0.11+dfsg-1ubuntu1 [2579 kB] 165s Get:49 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 165s Get:50 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtool all 2.4.7-7build1 [166 kB] 165s Get:51 http://ftpmaster.internal/ubuntu plucky/main ppc64el dh-autoreconf all 20 [16.1 kB] 165s Get:52 http://ftpmaster.internal/ubuntu plucky/main ppc64el libarchive-zip-perl all 1.68-1 [90.2 kB] 165s Get:53 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 165s Get:54 http://ftpmaster.internal/ubuntu plucky/main ppc64el dh-strip-nondeterminism all 1.14.0-1 [5058 B] 165s Get:55 http://ftpmaster.internal/ubuntu plucky/main ppc64el debugedit ppc64el 1:5.1-1 [52.1 kB] 165s Get:56 http://ftpmaster.internal/ubuntu plucky/main ppc64el dwz ppc64el 0.15-1build6 [142 kB] 165s Get:57 http://ftpmaster.internal/ubuntu plucky/main ppc64el gettext ppc64el 0.22.5-2 [1082 kB] 165s Get:58 http://ftpmaster.internal/ubuntu plucky/main ppc64el intltool-debian all 0.35.0+20060710.6 [23.2 kB] 165s Get:59 http://ftpmaster.internal/ubuntu plucky/main ppc64el po-debconf all 1.0.21+nmu1 [233 kB] 165s Get:60 http://ftpmaster.internal/ubuntu plucky/main ppc64el debhelper all 13.20ubuntu1 [893 kB] 165s Get:61 http://ftpmaster.internal/ubuntu plucky/universe ppc64el dh-python all 6.20241024 [112 kB] 165s Get:62 http://ftpmaster.internal/ubuntu plucky/main ppc64el xml-core all 0.19 [20.3 kB] 165s Get:63 http://ftpmaster.internal/ubuntu plucky/main ppc64el docutils-common all 0.21.2+dfsg-2 [131 kB] 165s Get:64 http://ftpmaster.internal/ubuntu plucky/universe ppc64el fonts-lyx all 2.4.2.1-1 [171 kB] 165s Get:65 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 165s Get:66 http://ftpmaster.internal/ubuntu plucky/universe ppc64el fonts-open-sans all 1.11-2 [635 kB] 165s Get:67 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 165s Get:68 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-3build2 [222 kB] 165s Get:69 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdeflate0 ppc64el 1.22-1 [63.3 kB] 165s Get:70 http://ftpmaster.internal/ubuntu plucky/main ppc64el libexpat1-dev ppc64el 2.6.2-2 [149 kB] 165s Get:71 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-8ubuntu1 [571 kB] 165s Get:72 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB] 165s Get:73 http://ftpmaster.internal/ubuntu plucky/main ppc64el libharfbuzz0b ppc64el 10.0.1-1 [596 kB] 165s Get:74 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 165s Get:75 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4ubuntu3 [1387 kB] 165s Get:76 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4ubuntu3 [71.2 kB] 165s Get:77 http://ftpmaster.internal/ubuntu plucky/main ppc64el libimagequant0 ppc64el 2.18.0-1build1 [43.2 kB] 165s Get:78 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu2 [219 kB] 165s Get:79 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 165s Get:80 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 165s Get:81 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 165s Get:82 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 165s Get:83 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-sphinxdoc all 7.4.7-4 [158 kB] 165s Get:84 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-perl all 4.10000-1 [81.9 kB] 165s Get:85 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-3build2 [2806 kB] 165s Get:86 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 165s Get:87 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB] 165s Get:88 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu2 [270 kB] 165s Get:89 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 165s Get:90 http://ftpmaster.internal/ubuntu plucky/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu1 [902 kB] 165s Get:91 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.12-dev ppc64el 3.12.7-3 [6136 kB] 165s Get:92 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-dev ppc64el 3.12.7-1 [10.3 kB] 165s Get:93 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-stdlib ppc64el 3.13.0-2 [2148 kB] 165s Get:94 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13 ppc64el 3.13.0-2 [2527 kB] 166s Get:95 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-dev ppc64el 3.13.0-2 [5958 kB] 166s Get:96 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-all-dev ppc64el 3.12.7-1 [916 B] 166s Get:97 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB] 166s Get:98 http://ftpmaster.internal/ubuntu plucky/main ppc64el libraqm0 ppc64el 0.10.1-1build1 [19.4 kB] 166s Get:99 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsharpyuv0 ppc64el 1.4.0-0.1 [22.0 kB] 166s Get:100 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsimde-dev all 0.8.2-1 [466 kB] 166s Get:101 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libssw0 ppc64el 1.1-15 [24.2 kB] 166s Get:102 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libssw-dev ppc64el 1.1-15 [26.2 kB] 166s Get:103 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 166s Get:104 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebp7 ppc64el 1.4.0-0.1 [309 kB] 166s Get:105 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtiff6 ppc64el 4.5.1+git230720-4ubuntu4 [272 kB] 166s Get:106 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebpdemux2 ppc64el 1.4.0-0.1 [14.1 kB] 166s Get:107 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebpmux3 ppc64el 1.4.0-0.1 [31.4 kB] 166s Get:108 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1ubuntu1 [191 kB] 166s Get:109 http://ftpmaster.internal/ubuntu plucky/universe ppc64el pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 166s Get:110 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-biom-format-doc all 2.1.16-1 [57.5 kB] 166s Get:111 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-matplotlib-data all 3.8.3-3 [2928 kB] 167s Get:112 http://ftpmaster.internal/ubuntu plucky/main ppc64el python-numpy-doc all 1:1.26.4+ds-11build1 [6734 kB] 167s Get:113 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 167s Get:114 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-pandas-doc all 2.2.3+dfsg-5 [9117 kB] 168s Get:115 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-skbio-doc all 0.6.2-3 [2071 kB] 168s Get:116 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13 ppc64el 3.13.0-2 [719 kB] 168s Get:117 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-all ppc64el 3.12.7-1 [888 B] 168s Get:118 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.12-dev ppc64el 3.12.7-3 [505 kB] 168s Get:119 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-dev ppc64el 3.12.7-1 [26.7 kB] 168s Get:120 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-dev ppc64el 3.13.0-2 [507 kB] 168s Get:121 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-all-dev ppc64el 3.12.7-1 [912 B] 168s Get:122 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 168s Get:123 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-asttokens all 2.4.1-2 [20.8 kB] 168s Get:124 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11build1 [4434 kB] 169s Get:125 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py-serial ppc64el 3.11.0-5ubuntu1 [1159 kB] 169s Get:126 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py all 3.11.0-5ubuntu1 [7974 B] 169s Get:127 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-colorama all 0.4.6-4 [32.1 kB] 169s Get:128 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-click all 8.1.7-2 [79.5 kB] 169s Get:129 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-six all 1.16.0-7 [13.1 kB] 169s Get:130 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-dateutil all 2.9.0-2 [80.3 kB] 169s Get:131 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-tz all 2024.1-2 [31.4 kB] 169s Get:132 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas-lib ppc64el 2.2.3+dfsg-5 [4761 kB] 169s Get:133 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas all 2.2.3+dfsg-5 [3112 kB] 169s Get:134 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 169s Get:135 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-scipy ppc64el 1.13.1-5 [18.3 MB] 171s Get:136 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-biom-format ppc64el 2.1.16-1 [152 kB] 171s Get:137 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-brotli ppc64el 1.1.0-2build2 [413 kB] 171s Get:138 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-soupsieve all 2.6-1 [33.0 kB] 171s Get:139 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-bs4 all 4.12.3-3 [109 kB] 171s Get:140 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-msgpack ppc64el 1.0.3-3build2 [86.9 kB] 171s Get:141 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-cachecontrol all 0.14.0-1 [19.0 kB] 171s Get:142 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-contourpy ppc64el 1.3.0-2 [217 kB] 171s Get:143 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-cycler all 0.12.1-1 [9716 B] 171s Get:144 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-defusedxml all 0.7.1-2 [42.0 kB] 171s Get:145 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.12-doc all 3.12.7-3 [12.4 MB] 172s Get:146 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-doc all 3.12.7-1 [10.3 kB] 172s Get:147 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-roman all 4.2-1 [10.0 kB] 172s Get:148 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-docutils all 0.21.2+dfsg-2 [409 kB] 172s Get:149 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-executing all 2.1.0-0.1 [24.4 kB] 172s Get:150 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 172s Get:151 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-mpmath all 1.3.0-1 [425 kB] 172s Get:152 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sympy all 1.13.3-1 [4228 kB] 172s Get:153 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-fs all 2.4.16-4 [91.3 kB] 172s Get:154 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-lxml ppc64el 5.3.0-1 [1354 kB] 172s Get:155 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build4 [27.8 kB] 172s Get:156 http://ftpmaster.internal/ubuntu plucky/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 173s Get:157 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-fonttools ppc64el 4.46.0-1build2 [1473 kB] 173s Get:158 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-hdmedians ppc64el 0.14.2-5.1build1 [147 kB] 173s Get:159 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-imagesize all 1.4.1-1 [6844 B] 173s Get:160 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 173s Get:161 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-parso all 0.8.3-1 [67.2 kB] 173s Get:162 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-typeshed all 0.0~git20231111.6764465-3 [1274 kB] 173s Get:163 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-jedi all 0.19.1+ds1-1 [693 kB] 173s Get:164 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 173s Get:165 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-matplotlib-inline all 0.1.6-2 [8784 B] 173s Get:166 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-ptyprocess all 0.7.0-6 [14.8 kB] 173s Get:167 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-pexpect all 4.9-2 [48.1 kB] 173s Get:168 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-wcwidth all 0.2.13+dfsg1-1 [26.3 kB] 173s Get:169 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-prompt-toolkit all 3.0.48-1 [256 kB] 173s Get:170 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pure-eval all 0.2.3-1 [11.4 kB] 173s Get:171 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-stack-data all 0.6.3-1 [22.0 kB] 173s Get:172 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-ipython all 8.20.0-1ubuntu1 [561 kB] 173s Get:173 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-joblib all 1.3.2-5 [206 kB] 173s Get:174 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-kiwisolver ppc64el 1.4.7-2 [59.2 kB] 173s Get:175 http://ftpmaster.internal/ubuntu plucky/main ppc64el libopenjp2-7 ppc64el 2.5.0-2ubuntu1 [246 kB] 173s Get:176 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-pil ppc64el 10.4.0-1ubuntu1 [581 kB] 173s Get:177 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.12-tk ppc64el 3.12.7-3 [116 kB] 173s Get:178 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-tk ppc64el 3.13.0-2 [107 kB] 173s Get:179 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-tk ppc64el 3.12.7-1 [9752 B] 173s Get:180 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pil.imagetk ppc64el 10.4.0-1ubuntu1 [9810 B] 173s Get:181 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-packaging all 24.1-1 [41.4 kB] 173s Get:182 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-matplotlib ppc64el 3.8.3-3 [4610 kB] 173s Get:183 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-natsort all 8.0.2-2 [33.8 kB] 173s Get:184 http://ftpmaster.internal/ubuntu plucky/main ppc64el sphinx-common all 7.4.7-4 [775 kB] 174s Get:185 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-alabaster all 0.7.16-0.1 [18.5 kB] 174s Get:186 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 174s Get:187 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-sphinx all 7.4.7-4 [593 kB] 174s Get:188 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-tabulate all 0.9.0-1 [45.3 kB] 174s Get:189 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-numpydoc all 1.6.0-2 [50.5 kB] 174s Get:190 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-patsy all 0.5.6-1 [181 kB] 174s Get:191 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 174s Get:192 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pydata-sphinx-theme all 0.15.4+dfsg-2 [41.5 kB] 174s Get:193 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pytest all 8.3.3-1 [251 kB] 174s Get:194 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-statsmodels-lib ppc64el 0.14.4+dfsg-1 [1727 kB] 174s Get:195 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-statsmodels all 0.14.4+dfsg-1 [5010 kB] 174s Get:196 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-skbio ppc64el 0.6.2-3 [1438 kB] 174s Get:197 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-threadpoolctl all 3.1.0-1 [21.3 kB] 174s Get:198 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sklearn-lib ppc64el 1.4.2+dfsg-6 [3838 kB] 175s Get:199 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sklearn all 1.4.2+dfsg-6 [2257 kB] 175s Get:200 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-copybutton all 0.5.2-2 [16.6 kB] 175s Get:201 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sphinx-design all 0.6.1-1 [894 kB] 175s Get:202 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-scipy-doc all 1.13.1-5 [31.1 kB] 175s Fetched 220 MB in 15s (14.8 MB/s) 175s Selecting previously unselected package libpython3.13-minimal:ppc64el. 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73775 files and directories currently installed.) 175s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_ppc64el.deb ... 175s Unpacking libpython3.13-minimal:ppc64el (3.13.0-2) ... 175s Selecting previously unselected package python3.13-minimal. 175s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_ppc64el.deb ... 175s Unpacking python3.13-minimal (3.13.0-2) ... 175s Selecting previously unselected package sgml-base. 175s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 175s Unpacking sgml-base (1.31) ... 175s Selecting previously unselected package architecture-properties:ppc64el. 175s Preparing to unpack .../003-architecture-properties_0.2.3_ppc64el.deb ... 175s Unpacking architecture-properties:ppc64el (0.2.3) ... 175s Selecting previously unselected package m4. 175s Preparing to unpack .../004-m4_1.4.19-4build1_ppc64el.deb ... 175s Unpacking m4 (1.4.19-4build1) ... 176s Selecting previously unselected package autoconf. 176s Preparing to unpack .../005-autoconf_2.72-3_all.deb ... 176s Unpacking autoconf (2.72-3) ... 176s Selecting previously unselected package autotools-dev. 176s Preparing to unpack .../006-autotools-dev_20220109.1_all.deb ... 176s Unpacking autotools-dev (20220109.1) ... 176s Selecting previously unselected package automake. 176s Preparing to unpack .../007-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 176s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 176s Selecting previously unselected package autopoint. 176s Preparing to unpack .../008-autopoint_0.22.5-2_all.deb ... 176s Unpacking autopoint (0.22.5-2) ... 176s Selecting previously unselected package libtcl8.6:ppc64el. 176s Preparing to unpack .../009-libtcl8.6_8.6.15+dfsg-2_ppc64el.deb ... 176s Unpacking libtcl8.6:ppc64el (8.6.15+dfsg-2) ... 176s Selecting previously unselected package fonts-dejavu-mono. 176s Preparing to unpack .../010-fonts-dejavu-mono_2.37-8_all.deb ... 176s Unpacking fonts-dejavu-mono (2.37-8) ... 176s Selecting previously unselected package fonts-dejavu-core. 176s Preparing to unpack .../011-fonts-dejavu-core_2.37-8_all.deb ... 176s Unpacking fonts-dejavu-core (2.37-8) ... 176s Selecting previously unselected package fontconfig-config. 176s Preparing to unpack .../012-fontconfig-config_2.15.0-1.1ubuntu2_ppc64el.deb ... 176s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 176s Selecting previously unselected package libfontconfig1:ppc64el. 176s Preparing to unpack .../013-libfontconfig1_2.15.0-1.1ubuntu2_ppc64el.deb ... 176s Unpacking libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ... 176s Selecting previously unselected package libxrender1:ppc64el. 176s Preparing to unpack .../014-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 176s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 176s Selecting previously unselected package libxft2:ppc64el. 176s Preparing to unpack .../015-libxft2_2.3.6-1build1_ppc64el.deb ... 176s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 176s Selecting previously unselected package x11-common. 176s Preparing to unpack .../016-x11-common_1%3a7.7+23ubuntu3_all.deb ... 176s Unpacking x11-common (1:7.7+23ubuntu3) ... 176s Selecting previously unselected package libxss1:ppc64el. 176s Preparing to unpack .../017-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 176s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 176s Selecting previously unselected package libtk8.6:ppc64el. 176s Preparing to unpack .../018-libtk8.6_8.6.15-1_ppc64el.deb ... 176s Unpacking libtk8.6:ppc64el (8.6.15-1) ... 176s Selecting previously unselected package tk8.6-blt2.5. 176s Preparing to unpack .../019-tk8.6-blt2.5_2.5.3+dfsg-7build1_ppc64el.deb ... 176s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 176s Selecting previously unselected package blt. 176s Preparing to unpack .../020-blt_2.5.3+dfsg-7build1_ppc64el.deb ... 176s Unpacking blt (2.5.3+dfsg-7build1) ... 176s Selecting previously unselected package libisl23:ppc64el. 176s Preparing to unpack .../021-libisl23_0.27-1_ppc64el.deb ... 176s Unpacking libisl23:ppc64el (0.27-1) ... 176s Selecting previously unselected package libmpc3:ppc64el. 176s Preparing to unpack .../022-libmpc3_1.3.1-1build2_ppc64el.deb ... 176s Unpacking libmpc3:ppc64el (1.3.1-1build2) ... 176s Selecting previously unselected package cpp-14-powerpc64le-linux-gnu. 176s Preparing to unpack .../023-cpp-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 176s Unpacking cpp-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 176s Selecting previously unselected package cpp-14. 176s Preparing to unpack .../024-cpp-14_14.2.0-8ubuntu1_ppc64el.deb ... 176s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 176s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 176s Preparing to unpack .../025-cpp-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 176s Unpacking cpp-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 176s Selecting previously unselected package cpp. 176s Preparing to unpack .../026-cpp_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 176s Unpacking cpp (4:14.1.0-2ubuntu1) ... 176s Selecting previously unselected package libcc1-0:ppc64el. 176s Preparing to unpack .../027-libcc1-0_14.2.0-8ubuntu1_ppc64el.deb ... 176s Unpacking libcc1-0:ppc64el (14.2.0-8ubuntu1) ... 176s Selecting previously unselected package libgomp1:ppc64el. 177s Preparing to unpack .../028-libgomp1_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libgomp1:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libitm1:ppc64el. 177s Preparing to unpack .../029-libitm1_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libitm1:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libasan8:ppc64el. 177s Preparing to unpack .../030-libasan8_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libasan8:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package liblsan0:ppc64el. 177s Preparing to unpack .../031-liblsan0_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking liblsan0:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libtsan2:ppc64el. 177s Preparing to unpack .../032-libtsan2_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libtsan2:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libubsan1:ppc64el. 177s Preparing to unpack .../033-libubsan1_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libubsan1:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libquadmath0:ppc64el. 177s Preparing to unpack .../034-libquadmath0_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libquadmath0:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package libgcc-14-dev:ppc64el. 177s Preparing to unpack .../035-libgcc-14-dev_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libgcc-14-dev:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package gcc-14-powerpc64le-linux-gnu. 177s Preparing to unpack .../036-gcc-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking gcc-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package gcc-14. 177s Preparing to unpack .../037-gcc-14_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 177s Preparing to unpack .../038-gcc-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 177s Unpacking gcc-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 177s Selecting previously unselected package gcc. 177s Preparing to unpack .../039-gcc_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 177s Unpacking gcc (4:14.1.0-2ubuntu1) ... 177s Selecting previously unselected package libstdc++-14-dev:ppc64el. 177s Preparing to unpack .../040-libstdc++-14-dev_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking libstdc++-14-dev:ppc64el (14.2.0-8ubuntu1) ... 177s Selecting previously unselected package g++-14-powerpc64le-linux-gnu. 177s Preparing to unpack .../041-g++-14-powerpc64le-linux-gnu_14.2.0-8ubuntu1_ppc64el.deb ... 177s Unpacking g++-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 178s Selecting previously unselected package g++-14. 178s Preparing to unpack .../042-g++-14_14.2.0-8ubuntu1_ppc64el.deb ... 178s Unpacking g++-14 (14.2.0-8ubuntu1) ... 178s Selecting previously unselected package g++-powerpc64le-linux-gnu. 178s Preparing to unpack .../043-g++-powerpc64le-linux-gnu_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 178s Unpacking g++-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 178s Selecting previously unselected package g++. 178s Preparing to unpack .../044-g++_4%3a14.1.0-2ubuntu1_ppc64el.deb ... 178s Unpacking g++ (4:14.1.0-2ubuntu1) ... 178s Selecting previously unselected package build-essential. 178s Preparing to unpack .../045-build-essential_12.10ubuntu1_ppc64el.deb ... 178s Unpacking build-essential (12.10ubuntu1) ... 178s Selecting previously unselected package cython3. 178s Preparing to unpack .../046-cython3_3.0.11+dfsg-1ubuntu1_ppc64el.deb ... 178s Unpacking cython3 (3.0.11+dfsg-1ubuntu1) ... 178s Selecting previously unselected package libdebhelper-perl. 178s Preparing to unpack .../047-libdebhelper-perl_13.20ubuntu1_all.deb ... 178s Unpacking libdebhelper-perl (13.20ubuntu1) ... 178s Selecting previously unselected package libtool. 178s Preparing to unpack .../048-libtool_2.4.7-7build1_all.deb ... 178s Unpacking libtool (2.4.7-7build1) ... 178s Selecting previously unselected package dh-autoreconf. 178s Preparing to unpack .../049-dh-autoreconf_20_all.deb ... 178s Unpacking dh-autoreconf (20) ... 178s Selecting previously unselected package libarchive-zip-perl. 178s Preparing to unpack .../050-libarchive-zip-perl_1.68-1_all.deb ... 178s Unpacking libarchive-zip-perl (1.68-1) ... 178s Selecting previously unselected package libfile-stripnondeterminism-perl. 178s Preparing to unpack .../051-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 178s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 178s Selecting previously unselected package dh-strip-nondeterminism. 178s Preparing to unpack .../052-dh-strip-nondeterminism_1.14.0-1_all.deb ... 178s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 178s Selecting previously unselected package debugedit. 178s Preparing to unpack .../053-debugedit_1%3a5.1-1_ppc64el.deb ... 178s Unpacking debugedit (1:5.1-1) ... 178s Selecting previously unselected package dwz. 178s Preparing to unpack .../054-dwz_0.15-1build6_ppc64el.deb ... 178s Unpacking dwz (0.15-1build6) ... 178s Selecting previously unselected package gettext. 178s Preparing to unpack .../055-gettext_0.22.5-2_ppc64el.deb ... 178s Unpacking gettext (0.22.5-2) ... 178s Selecting previously unselected package intltool-debian. 178s Preparing to unpack .../056-intltool-debian_0.35.0+20060710.6_all.deb ... 178s Unpacking intltool-debian (0.35.0+20060710.6) ... 178s Selecting previously unselected package po-debconf. 178s Preparing to unpack .../057-po-debconf_1.0.21+nmu1_all.deb ... 178s Unpacking po-debconf (1.0.21+nmu1) ... 178s Selecting previously unselected package debhelper. 178s Preparing to unpack .../058-debhelper_13.20ubuntu1_all.deb ... 178s Unpacking debhelper (13.20ubuntu1) ... 178s Selecting previously unselected package dh-python. 178s Preparing to unpack .../059-dh-python_6.20241024_all.deb ... 178s Unpacking dh-python (6.20241024) ... 178s Selecting previously unselected package xml-core. 178s Preparing to unpack .../060-xml-core_0.19_all.deb ... 178s Unpacking xml-core (0.19) ... 178s Selecting previously unselected package docutils-common. 178s Preparing to unpack .../061-docutils-common_0.21.2+dfsg-2_all.deb ... 178s Unpacking docutils-common (0.21.2+dfsg-2) ... 178s Selecting previously unselected package fonts-lyx. 178s Preparing to unpack .../062-fonts-lyx_2.4.2.1-1_all.deb ... 178s Unpacking fonts-lyx (2.4.2.1-1) ... 178s Selecting previously unselected package fonts-mathjax. 178s Preparing to unpack .../063-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 178s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 178s Selecting previously unselected package fonts-open-sans. 178s Preparing to unpack .../064-fonts-open-sans_1.11-2_all.deb ... 178s Unpacking fonts-open-sans (1.11-2) ... 178s Selecting previously unselected package libaec0:ppc64el. 178s Preparing to unpack .../065-libaec0_1.1.3-1_ppc64el.deb ... 178s Unpacking libaec0:ppc64el (1.1.3-1) ... 178s Selecting previously unselected package libblas3:ppc64el. 178s Preparing to unpack .../066-libblas3_3.12.0-3build2_ppc64el.deb ... 178s Unpacking libblas3:ppc64el (3.12.0-3build2) ... 178s Selecting previously unselected package libdeflate0:ppc64el. 178s Preparing to unpack .../067-libdeflate0_1.22-1_ppc64el.deb ... 178s Unpacking libdeflate0:ppc64el (1.22-1) ... 178s Selecting previously unselected package libexpat1-dev:ppc64el. 178s Preparing to unpack .../068-libexpat1-dev_2.6.2-2_ppc64el.deb ... 178s Unpacking libexpat1-dev:ppc64el (2.6.2-2) ... 178s Selecting previously unselected package libgfortran5:ppc64el. 178s Preparing to unpack .../069-libgfortran5_14.2.0-8ubuntu1_ppc64el.deb ... 178s Unpacking libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 178s Selecting previously unselected package libgraphite2-3:ppc64el. 178s Preparing to unpack .../070-libgraphite2-3_1.3.14-2ubuntu1_ppc64el.deb ... 178s Unpacking libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 178s Selecting previously unselected package libharfbuzz0b:ppc64el. 178s Preparing to unpack .../071-libharfbuzz0b_10.0.1-1_ppc64el.deb ... 178s Unpacking libharfbuzz0b:ppc64el (10.0.1-1) ... 178s Selecting previously unselected package libsz2:ppc64el. 178s Preparing to unpack .../072-libsz2_1.1.3-1_ppc64el.deb ... 178s Unpacking libsz2:ppc64el (1.1.3-1) ... 178s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 178s Preparing to unpack .../073-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 178s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 179s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 179s Preparing to unpack .../074-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 179s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 179s Selecting previously unselected package libimagequant0:ppc64el. 179s Preparing to unpack .../075-libimagequant0_2.18.0-1build1_ppc64el.deb ... 179s Unpacking libimagequant0:ppc64el (2.18.0-1build1) ... 179s Selecting previously unselected package libjpeg-turbo8:ppc64el. 179s Preparing to unpack .../076-libjpeg-turbo8_2.1.5-2ubuntu2_ppc64el.deb ... 179s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu2) ... 179s Selecting previously unselected package libjpeg8:ppc64el. 179s Preparing to unpack .../077-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 179s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 179s Selecting previously unselected package libjs-jquery. 179s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 179s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 179s Selecting previously unselected package libjs-jquery-ui. 179s Preparing to unpack .../079-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 179s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 179s Selecting previously unselected package libjs-underscore. 179s Preparing to unpack .../080-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 179s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 179s Selecting previously unselected package libjs-sphinxdoc. 179s Preparing to unpack .../081-libjs-sphinxdoc_7.4.7-4_all.deb ... 179s Unpacking libjs-sphinxdoc (7.4.7-4) ... 179s Selecting previously unselected package libjson-perl. 179s Preparing to unpack .../082-libjson-perl_4.10000-1_all.deb ... 179s Unpacking libjson-perl (4.10000-1) ... 179s Selecting previously unselected package liblapack3:ppc64el. 179s Preparing to unpack .../083-liblapack3_3.12.0-3build2_ppc64el.deb ... 179s Unpacking liblapack3:ppc64el (3.12.0-3build2) ... 179s Selecting previously unselected package liblbfgsb0:ppc64el. 179s Preparing to unpack .../084-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 179s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 179s Selecting previously unselected package liblcms2-2:ppc64el. 179s Preparing to unpack .../085-liblcms2-2_2.16-2_ppc64el.deb ... 179s Unpacking liblcms2-2:ppc64el (2.16-2) ... 179s Selecting previously unselected package liblerc4:ppc64el. 179s Preparing to unpack .../086-liblerc4_4.0.0+ds-4ubuntu2_ppc64el.deb ... 179s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu2) ... 179s Selecting previously unselected package liblzf1:ppc64el. 179s Preparing to unpack .../087-liblzf1_3.6-4_ppc64el.deb ... 179s Unpacking liblzf1:ppc64el (3.6-4) ... 179s Selecting previously unselected package zlib1g-dev:ppc64el. 179s Preparing to unpack .../088-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_ppc64el.deb ... 179s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 179s Selecting previously unselected package libpython3.12-dev:ppc64el. 179s Preparing to unpack .../089-libpython3.12-dev_3.12.7-3_ppc64el.deb ... 179s Unpacking libpython3.12-dev:ppc64el (3.12.7-3) ... 179s Selecting previously unselected package libpython3-dev:ppc64el. 179s Preparing to unpack .../090-libpython3-dev_3.12.7-1_ppc64el.deb ... 179s Unpacking libpython3-dev:ppc64el (3.12.7-1) ... 179s Selecting previously unselected package libpython3.13-stdlib:ppc64el. 179s Preparing to unpack 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unpack .../096-libraqm0_0.10.1-1build1_ppc64el.deb ... 180s Unpacking libraqm0:ppc64el (0.10.1-1build1) ... 180s Selecting previously unselected package libsharpyuv0:ppc64el. 180s Preparing to unpack .../097-libsharpyuv0_1.4.0-0.1_ppc64el.deb ... 180s Unpacking libsharpyuv0:ppc64el (1.4.0-0.1) ... 180s Selecting previously unselected package libsimde-dev. 180s Preparing to unpack .../098-libsimde-dev_0.8.2-1_all.deb ... 180s Unpacking libsimde-dev (0.8.2-1) ... 180s Selecting previously unselected package libssw0:ppc64el. 180s Preparing to unpack .../099-libssw0_1.1-15_ppc64el.deb ... 180s Unpacking libssw0:ppc64el (1.1-15) ... 180s Selecting previously unselected package libssw-dev:ppc64el. 180s Preparing to unpack .../100-libssw-dev_1.1-15_ppc64el.deb ... 180s Unpacking libssw-dev:ppc64el (1.1-15) ... 180s Selecting previously unselected package libjbig0:ppc64el. 180s Preparing to unpack .../101-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 180s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 180s Selecting previously unselected package libwebp7:ppc64el. 180s Preparing to unpack .../102-libwebp7_1.4.0-0.1_ppc64el.deb ... 180s Unpacking libwebp7:ppc64el (1.4.0-0.1) ... 180s Selecting previously unselected package libtiff6:ppc64el. 180s Preparing to unpack .../103-libtiff6_4.5.1+git230720-4ubuntu4_ppc64el.deb ... 180s Unpacking libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ... 180s Selecting previously unselected package libwebpdemux2:ppc64el. 180s Preparing to unpack .../104-libwebpdemux2_1.4.0-0.1_ppc64el.deb ... 180s Unpacking libwebpdemux2:ppc64el (1.4.0-0.1) ... 180s Selecting previously unselected package libwebpmux3:ppc64el. 180s Preparing to unpack .../105-libwebpmux3_1.4.0-0.1_ppc64el.deb ... 180s Unpacking libwebpmux3:ppc64el (1.4.0-0.1) ... 180s Selecting previously unselected package libxslt1.1:ppc64el. 180s Preparing to unpack .../106-libxslt1.1_1.1.39-0exp1ubuntu1_ppc64el.deb ... 180s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1ubuntu1) ... 180s Selecting previously unselected package pybuild-plugin-autopkgtest. 180s Preparing to unpack .../107-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 180s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 180s Selecting previously unselected package python-biom-format-doc. 180s Preparing to unpack .../108-python-biom-format-doc_2.1.16-1_all.deb ... 180s Unpacking python-biom-format-doc (2.1.16-1) ... 180s Selecting previously unselected package python-matplotlib-data. 180s Preparing to unpack .../109-python-matplotlib-data_3.8.3-3_all.deb ... 180s Unpacking python-matplotlib-data (3.8.3-3) ... 180s Selecting previously unselected package python-numpy-doc. 180s Preparing to unpack .../110-python-numpy-doc_1%3a1.26.4+ds-11build1_all.deb ... 180s Unpacking python-numpy-doc (1:1.26.4+ds-11build1) ... 181s Selecting previously unselected package libjs-mathjax. 181s Preparing to unpack .../111-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 181s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 182s Selecting previously unselected package python-pandas-doc. 182s Preparing to unpack .../112-python-pandas-doc_2.2.3+dfsg-5_all.deb ... 182s Unpacking python-pandas-doc (2.2.3+dfsg-5) ... 183s Selecting previously unselected package python-skbio-doc. 183s Preparing to unpack .../113-python-skbio-doc_0.6.2-3_all.deb ... 183s Unpacking python-skbio-doc (0.6.2-3) ... 183s Selecting previously unselected package python3.13. 183s Preparing to unpack .../114-python3.13_3.13.0-2_ppc64el.deb ... 183s Unpacking python3.13 (3.13.0-2) ... 183s Selecting previously unselected package python3-all. 183s Preparing to unpack .../115-python3-all_3.12.7-1_ppc64el.deb ... 183s Unpacking python3-all (3.12.7-1) ... 183s Selecting previously unselected package python3.12-dev. 183s Preparing to unpack .../116-python3.12-dev_3.12.7-3_ppc64el.deb ... 183s Unpacking python3.12-dev (3.12.7-3) ... 184s Selecting previously unselected package python3-dev. 184s Preparing to unpack .../117-python3-dev_3.12.7-1_ppc64el.deb ... 184s Unpacking python3-dev (3.12.7-1) ... 184s Selecting previously unselected package python3.13-dev. 184s Preparing to unpack .../118-python3.13-dev_3.13.0-2_ppc64el.deb ... 184s Unpacking python3.13-dev (3.13.0-2) ... 184s Selecting previously unselected package python3-all-dev. 184s Preparing to unpack .../119-python3-all-dev_3.12.7-1_ppc64el.deb ... 184s Unpacking python3-all-dev (3.12.7-1) ... 184s Selecting previously unselected package python3-appdirs. 184s Preparing to unpack .../120-python3-appdirs_1.4.4-4_all.deb ... 184s Unpacking python3-appdirs (1.4.4-4) ... 184s Selecting previously unselected package python3-asttokens. 184s Preparing to unpack .../121-python3-asttokens_2.4.1-2_all.deb ... 184s Unpacking python3-asttokens (2.4.1-2) ... 184s Selecting previously unselected package python3-numpy. 184s Preparing to unpack .../122-python3-numpy_1%3a1.26.4+ds-11build1_ppc64el.deb ... 184s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 184s Selecting previously unselected package python3-h5py-serial. 184s Preparing to unpack .../123-python3-h5py-serial_3.11.0-5ubuntu1_ppc64el.deb ... 184s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 184s Selecting previously unselected package python3-h5py. 184s Preparing to unpack .../124-python3-h5py_3.11.0-5ubuntu1_all.deb ... 184s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 184s Selecting previously unselected package python3-colorama. 184s Preparing to unpack .../125-python3-colorama_0.4.6-4_all.deb ... 184s Unpacking python3-colorama (0.4.6-4) ... 184s Selecting previously unselected package python3-click. 184s Preparing to unpack .../126-python3-click_8.1.7-2_all.deb ... 184s Unpacking python3-click (8.1.7-2) ... 184s Selecting previously unselected package python3-six. 184s Preparing to unpack .../127-python3-six_1.16.0-7_all.deb ... 184s Unpacking python3-six (1.16.0-7) ... 184s Selecting previously unselected package python3-dateutil. 184s Preparing to unpack .../128-python3-dateutil_2.9.0-2_all.deb ... 184s Unpacking python3-dateutil (2.9.0-2) ... 184s Selecting previously unselected package python3-tz. 184s Preparing to unpack .../129-python3-tz_2024.1-2_all.deb ... 184s Unpacking python3-tz (2024.1-2) ... 184s Selecting previously unselected package python3-pandas-lib:ppc64el. 184s Preparing to unpack .../130-python3-pandas-lib_2.2.3+dfsg-5_ppc64el.deb ... 184s Unpacking python3-pandas-lib:ppc64el (2.2.3+dfsg-5) ... 184s Selecting previously unselected package python3-pandas. 184s Preparing to unpack .../131-python3-pandas_2.2.3+dfsg-5_all.deb ... 184s Unpacking python3-pandas (2.2.3+dfsg-5) ... 184s Selecting previously unselected package python3-decorator. 184s Preparing to unpack .../132-python3-decorator_5.1.1-5_all.deb ... 184s Unpacking python3-decorator (5.1.1-5) ... 184s Selecting previously unselected package python3-scipy. 184s Preparing to unpack .../133-python3-scipy_1.13.1-5_ppc64el.deb ... 184s Unpacking python3-scipy (1.13.1-5) ... 185s Selecting previously unselected package python3-biom-format. 185s Preparing to unpack .../134-python3-biom-format_2.1.16-1_ppc64el.deb ... 185s Unpacking python3-biom-format (2.1.16-1) ... 185s Selecting previously unselected package python3-brotli. 185s Preparing to unpack .../135-python3-brotli_1.1.0-2build2_ppc64el.deb ... 185s Unpacking python3-brotli (1.1.0-2build2) ... 185s Selecting previously unselected package python3-soupsieve. 185s Preparing to unpack .../136-python3-soupsieve_2.6-1_all.deb ... 185s Unpacking python3-soupsieve (2.6-1) ... 185s Selecting previously unselected package python3-bs4. 185s Preparing to unpack .../137-python3-bs4_4.12.3-3_all.deb ... 185s Unpacking python3-bs4 (4.12.3-3) ... 185s Selecting previously unselected package python3-msgpack. 185s Preparing to unpack .../138-python3-msgpack_1.0.3-3build2_ppc64el.deb ... 185s Unpacking python3-msgpack (1.0.3-3build2) ... 185s Selecting previously unselected package python3-cachecontrol. 185s Preparing to unpack .../139-python3-cachecontrol_0.14.0-1_all.deb ... 185s Unpacking python3-cachecontrol (0.14.0-1) ... 185s Selecting previously unselected package python3-contourpy. 185s Preparing to unpack .../140-python3-contourpy_1.3.0-2_ppc64el.deb ... 185s Unpacking python3-contourpy (1.3.0-2) ... 185s Selecting previously unselected package python3-cycler. 185s Preparing to unpack .../141-python3-cycler_0.12.1-1_all.deb ... 185s Unpacking python3-cycler (0.12.1-1) ... 185s Selecting previously unselected package python3-defusedxml. 185s Preparing to unpack .../142-python3-defusedxml_0.7.1-2_all.deb ... 185s Unpacking python3-defusedxml (0.7.1-2) ... 185s Selecting previously unselected package python3.12-doc. 185s Preparing to unpack .../143-python3.12-doc_3.12.7-3_all.deb ... 185s Unpacking python3.12-doc (3.12.7-3) ... 185s Selecting previously unselected package python3-doc. 185s Preparing to unpack .../144-python3-doc_3.12.7-1_all.deb ... 185s Unpacking python3-doc (3.12.7-1) ... 186s Selecting previously unselected package python3-roman. 186s Preparing to unpack .../145-python3-roman_4.2-1_all.deb ... 186s Unpacking python3-roman (4.2-1) ... 186s Selecting previously unselected package python3-docutils. 186s Preparing to unpack .../146-python3-docutils_0.21.2+dfsg-2_all.deb ... 186s Unpacking python3-docutils (0.21.2+dfsg-2) ... 186s Selecting previously unselected package python3-executing. 186s Preparing to unpack .../147-python3-executing_2.1.0-0.1_all.deb ... 186s Unpacking python3-executing (2.1.0-0.1) ... 186s Selecting previously unselected package python3-ufolib2. 186s Preparing to unpack .../148-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 186s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 186s Selecting previously unselected package python3-mpmath. 186s Preparing to unpack .../149-python3-mpmath_1.3.0-1_all.deb ... 186s Unpacking python3-mpmath (1.3.0-1) ... 186s Selecting previously unselected package python3-sympy. 186s Preparing to unpack .../150-python3-sympy_1.13.3-1_all.deb ... 186s Unpacking python3-sympy (1.13.3-1) ... 186s Selecting previously unselected package python3-fs. 186s Preparing to unpack .../151-python3-fs_2.4.16-4_all.deb ... 186s Unpacking python3-fs (2.4.16-4) ... 186s Selecting previously unselected package python3-lxml:ppc64el. 186s Preparing to unpack .../152-python3-lxml_5.3.0-1_ppc64el.deb ... 186s Unpacking python3-lxml:ppc64el (5.3.0-1) ... 186s Selecting previously unselected package python3-lz4. 186s Preparing to unpack .../153-python3-lz4_4.0.2+dfsg-1build4_ppc64el.deb ... 186s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 186s Selecting previously unselected package unicode-data. 186s Preparing to unpack .../154-unicode-data_15.1.0-1_all.deb ... 186s Unpacking unicode-data (15.1.0-1) ... 186s Selecting previously unselected package python3-fonttools. 186s Preparing to unpack .../155-python3-fonttools_4.46.0-1build2_ppc64el.deb ... 186s Unpacking python3-fonttools (4.46.0-1build2) ... 186s Selecting previously unselected package python3-hdmedians. 186s Preparing to unpack .../156-python3-hdmedians_0.14.2-5.1build1_ppc64el.deb ... 186s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 186s Selecting previously unselected package python3-imagesize. 186s Preparing to unpack .../157-python3-imagesize_1.4.1-1_all.deb ... 186s Unpacking python3-imagesize (1.4.1-1) ... 186s Selecting previously unselected package python3-iniconfig. 186s Preparing to unpack .../158-python3-iniconfig_1.1.1-2_all.deb ... 186s Unpacking python3-iniconfig (1.1.1-2) ... 186s Selecting previously unselected package python3-parso. 186s Preparing to unpack .../159-python3-parso_0.8.3-1_all.deb ... 186s Unpacking python3-parso (0.8.3-1) ... 186s Selecting previously unselected package python3-typeshed. 186s Preparing to unpack .../160-python3-typeshed_0.0~git20231111.6764465-3_all.deb ... 186s Unpacking python3-typeshed (0.0~git20231111.6764465-3) ... 187s Selecting previously unselected package python3-jedi. 187s Preparing to unpack .../161-python3-jedi_0.19.1+ds1-1_all.deb ... 187s Unpacking python3-jedi (0.19.1+ds1-1) ... 187s Selecting previously unselected package python3-traitlets. 187s Preparing to unpack .../162-python3-traitlets_5.14.3+really5.14.3-1_all.deb ... 187s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ... 187s Selecting previously unselected package python3-matplotlib-inline. 187s Preparing to unpack .../163-python3-matplotlib-inline_0.1.6-2_all.deb ... 187s Unpacking python3-matplotlib-inline (0.1.6-2) ... 187s Selecting previously unselected package python3-ptyprocess. 187s Preparing to unpack .../164-python3-ptyprocess_0.7.0-6_all.deb ... 187s Unpacking python3-ptyprocess (0.7.0-6) ... 187s Selecting previously unselected package python3-pexpect. 187s Preparing to unpack .../165-python3-pexpect_4.9-2_all.deb ... 187s Unpacking python3-pexpect (4.9-2) ... 187s Selecting previously unselected package python3-wcwidth. 187s Preparing to unpack .../166-python3-wcwidth_0.2.13+dfsg1-1_all.deb ... 187s Unpacking python3-wcwidth (0.2.13+dfsg1-1) ... 187s Selecting previously unselected package python3-prompt-toolkit. 187s Preparing to unpack .../167-python3-prompt-toolkit_3.0.48-1_all.deb ... 187s Unpacking python3-prompt-toolkit (3.0.48-1) ... 187s Selecting previously unselected package python3-pure-eval. 187s Preparing to unpack .../168-python3-pure-eval_0.2.3-1_all.deb ... 187s Unpacking python3-pure-eval (0.2.3-1) ... 187s Selecting previously unselected package python3-stack-data. 187s Preparing to unpack .../169-python3-stack-data_0.6.3-1_all.deb ... 187s Unpacking python3-stack-data (0.6.3-1) ... 187s Selecting previously unselected package python3-ipython. 187s Preparing to unpack .../170-python3-ipython_8.20.0-1ubuntu1_all.deb ... 187s Unpacking python3-ipython (8.20.0-1ubuntu1) ... 188s Selecting previously unselected package python3-joblib. 188s Preparing to unpack .../171-python3-joblib_1.3.2-5_all.deb ... 188s Unpacking python3-joblib (1.3.2-5) ... 188s Selecting previously unselected package python3-kiwisolver. 188s Preparing to unpack .../172-python3-kiwisolver_1.4.7-2_ppc64el.deb ... 188s Unpacking python3-kiwisolver (1.4.7-2) ... 188s Selecting previously unselected package libopenjp2-7:ppc64el. 188s Preparing to unpack .../173-libopenjp2-7_2.5.0-2ubuntu1_ppc64el.deb ... 188s Unpacking libopenjp2-7:ppc64el (2.5.0-2ubuntu1) ... 188s Selecting previously unselected package python3-pil:ppc64el. 188s Preparing to unpack .../174-python3-pil_10.4.0-1ubuntu1_ppc64el.deb ... 188s Unpacking python3-pil:ppc64el (10.4.0-1ubuntu1) ... 188s Selecting previously unselected package python3.12-tk. 188s Preparing to unpack .../175-python3.12-tk_3.12.7-3_ppc64el.deb ... 188s Unpacking python3.12-tk (3.12.7-3) ... 188s Selecting previously unselected package python3.13-tk. 188s Preparing to unpack .../176-python3.13-tk_3.13.0-2_ppc64el.deb ... 188s Unpacking python3.13-tk (3.13.0-2) ... 188s Selecting previously unselected package python3-tk:ppc64el. 188s Preparing to unpack .../177-python3-tk_3.12.7-1_ppc64el.deb ... 188s Unpacking python3-tk:ppc64el (3.12.7-1) ... 188s Selecting previously unselected package python3-pil.imagetk:ppc64el. 188s Preparing to unpack .../178-python3-pil.imagetk_10.4.0-1ubuntu1_ppc64el.deb ... 188s Unpacking python3-pil.imagetk:ppc64el (10.4.0-1ubuntu1) ... 188s Selecting previously unselected package python3-packaging. 188s Preparing to unpack .../179-python3-packaging_24.1-1_all.deb ... 188s Unpacking python3-packaging (24.1-1) ... 188s Selecting previously unselected package python3-matplotlib. 188s Preparing to unpack .../180-python3-matplotlib_3.8.3-3_ppc64el.deb ... 188s Unpacking python3-matplotlib (3.8.3-3) ... 188s Selecting previously unselected package python3-natsort. 188s Preparing to unpack .../181-python3-natsort_8.0.2-2_all.deb ... 188s Unpacking python3-natsort (8.0.2-2) ... 188s Selecting previously unselected package sphinx-common. 188s Preparing to unpack .../182-sphinx-common_7.4.7-4_all.deb ... 188s Unpacking sphinx-common (7.4.7-4) ... 188s Selecting previously unselected package python3-alabaster. 188s Preparing to unpack .../183-python3-alabaster_0.7.16-0.1_all.deb ... 188s Unpacking python3-alabaster (0.7.16-0.1) ... 188s Selecting previously unselected package python3-snowballstemmer. 188s Preparing to unpack .../184-python3-snowballstemmer_2.2.0-4build1_all.deb ... 188s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 188s Selecting previously unselected package python3-sphinx. 188s Preparing to unpack .../185-python3-sphinx_7.4.7-4_all.deb ... 188s Unpacking python3-sphinx (7.4.7-4) ... 188s Selecting previously unselected package python3-tabulate. 188s Preparing to unpack .../186-python3-tabulate_0.9.0-1_all.deb ... 188s Unpacking python3-tabulate (0.9.0-1) ... 188s Selecting previously unselected package python3-numpydoc. 188s Preparing to unpack .../187-python3-numpydoc_1.6.0-2_all.deb ... 188s Unpacking python3-numpydoc (1.6.0-2) ... 188s Selecting previously unselected package python3-patsy. 188s Preparing to unpack .../188-python3-patsy_0.5.6-1_all.deb ... 188s Unpacking python3-patsy (0.5.6-1) ... 188s Selecting previously unselected package python3-pluggy. 188s Preparing to unpack .../189-python3-pluggy_1.5.0-1_all.deb ... 188s Unpacking python3-pluggy (1.5.0-1) ... 188s Selecting previously unselected package python3-pydata-sphinx-theme. 188s Preparing to unpack .../190-python3-pydata-sphinx-theme_0.15.4+dfsg-2_all.deb ... 188s Unpacking python3-pydata-sphinx-theme (0.15.4+dfsg-2) ... 188s Selecting previously unselected package python3-pytest. 188s Preparing to unpack .../191-python3-pytest_8.3.3-1_all.deb ... 188s Unpacking python3-pytest (8.3.3-1) ... 188s Selecting previously unselected package python3-statsmodels-lib:ppc64el. 188s Preparing to unpack .../192-python3-statsmodels-lib_0.14.4+dfsg-1_ppc64el.deb ... 188s Unpacking python3-statsmodels-lib:ppc64el (0.14.4+dfsg-1) ... 188s Selecting previously unselected package python3-statsmodels. 188s Preparing to unpack .../193-python3-statsmodels_0.14.4+dfsg-1_all.deb ... 188s Unpacking python3-statsmodels (0.14.4+dfsg-1) ... 189s Selecting previously unselected package python3-skbio. 189s Preparing to unpack .../194-python3-skbio_0.6.2-3_ppc64el.deb ... 189s Unpacking python3-skbio (0.6.2-3) ... 189s Selecting previously unselected package python3-threadpoolctl. 189s Preparing to unpack .../195-python3-threadpoolctl_3.1.0-1_all.deb ... 189s Unpacking python3-threadpoolctl (3.1.0-1) ... 189s Selecting previously unselected package python3-sklearn-lib:ppc64el. 189s Preparing to unpack .../196-python3-sklearn-lib_1.4.2+dfsg-6_ppc64el.deb ... 189s Unpacking python3-sklearn-lib:ppc64el (1.4.2+dfsg-6) ... 189s Selecting previously unselected package python3-sklearn. 189s Preparing to unpack .../197-python3-sklearn_1.4.2+dfsg-6_all.deb ... 189s Unpacking python3-sklearn (1.4.2+dfsg-6) ... 189s Selecting previously unselected package python3-sphinx-copybutton. 189s Preparing to unpack .../198-python3-sphinx-copybutton_0.5.2-2_all.deb ... 189s Unpacking python3-sphinx-copybutton (0.5.2-2) ... 189s Selecting previously unselected package python3-sphinx-design. 189s Preparing to unpack .../199-python3-sphinx-design_0.6.1-1_all.deb ... 189s Unpacking python3-sphinx-design (0.6.1-1) ... 189s Selecting previously unselected package python-scipy-doc. 189s Preparing to unpack .../200-python-scipy-doc_1.13.1-5_all.deb ... 189s Unpacking python-scipy-doc (1.13.1-5) ... 189s Selecting previously unselected package autopkgtest-satdep. 189s Preparing to unpack .../201-1-autopkgtest-satdep.deb ... 189s Unpacking autopkgtest-satdep (0) ... 189s Setting up dh-python (6.20241024) ... 189s Setting up libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 189s Setting up libsimde-dev (0.8.2-1) ... 189s Setting up liblcms2-2:ppc64el (2.16-2) ... 189s Setting up python3-iniconfig (1.1.1-2) ... 190s Setting up libsharpyuv0:ppc64el (1.4.0-0.1) ... 190s Setting up python3-pure-eval (0.2.3-1) ... 190s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 190s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu2) ... 190s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 190s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 190s Setting up python3-joblib (1.3.2-5) ... 191s Setting up python3-parso (0.8.3-1) ... 191s Setting up python3-colorama (0.4.6-4) ... 191s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 191s Setting up python3-defusedxml (0.7.1-2) ... 191s Setting up libarchive-zip-perl (1.68-1) ... 191s Setting up python3-asttokens (2.4.1-2) ... 192s Setting up architecture-properties:ppc64el (0.2.3) ... 192s Setting up python3-alabaster (0.7.16-0.1) ... 192s Setting up fonts-lyx (2.4.2.1-1) ... 192s Setting up libdebhelper-perl (13.20ubuntu1) ... 192s Setting up python3-threadpoolctl (3.1.0-1) ... 192s Setting up x11-common (1:7.7+23ubuntu3) ... 193s Setting up libdeflate0:ppc64el (1.22-1) ... 193s Setting up python3-tabulate (0.9.0-1) ... 193s Setting up m4 (1.4.19-4build1) ... 193s Setting up libqhull-r8.0:ppc64el (2020.2-6build1) ... 193s Setting up libgomp1:ppc64el (14.2.0-8ubuntu1) ... 193s Setting up python3-click (8.1.7-2) ... 193s Setting up fonts-open-sans (1.11-2) ... 193s Setting up libjbig0:ppc64el (2.1-6.1ubuntu2) ... 193s Setting up libaec0:ppc64el (1.1.3-1) ... 193s Setting up python3-tz (2024.1-2) ... 193s Setting up python3-natsort (8.0.2-2) ... 193s Setting up unicode-data (15.1.0-1) ... 193s Setting up python3-six (1.16.0-7) ... 194s Setting up libpython3.13-minimal:ppc64el (3.13.0-2) ... 194s Setting up python3-roman (4.2-1) ... 194s Setting up python3-decorator (5.1.1-5) ... 194s Setting up autotools-dev (20220109.1) ... 194s Setting up libblas3:ppc64el (3.12.0-3build2) ... 194s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 194s Setting up python3-packaging (24.1-1) ... 194s Setting up libexpat1-dev:ppc64el (2.6.2-2) ... 194s Setting up python3-wcwidth (0.2.13+dfsg1-1) ... 195s Setting up python3-typeshed (0.0~git20231111.6764465-3) ... 195s Setting up python3-executing (2.1.0-0.1) ... 195s Setting up python3-snowballstemmer (2.2.0-4build1) ... 195s Setting up python3-brotli (1.1.0-2build2) ... 196s Setting up liblzf1:ppc64el (3.6-4) ... 196s Setting up libquadmath0:ppc64el (14.2.0-8ubuntu1) ... 196s Setting up python3-cycler (0.12.1-1) ... 196s Setting up libimagequant0:ppc64el (2.18.0-1build1) ... 196s Setting up fonts-dejavu-mono (2.37-8) ... 196s Setting up python3-kiwisolver (1.4.7-2) ... 196s Setting up libmpc3:ppc64el (1.3.1-1build2) ... 196s Setting up cython3 (3.0.11+dfsg-1ubuntu1) ... 198s Setting up libtcl8.6:ppc64el (8.6.15+dfsg-2) ... 198s Setting up autopoint (0.22.5-2) ... 198s Setting up fonts-dejavu-core (2.37-8) ... 198s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu2) ... 198s Setting up libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 198s Setting up autoconf (2.72-3) ... 198s Setting up python3-pluggy (1.5.0-1) ... 198s Setting up libwebp7:ppc64el (1.4.0-0.1) ... 198s Setting up libubsan1:ppc64el (14.2.0-8ubuntu1) ... 198s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 198s Setting up dwz (0.15-1build6) ... 198s Setting up python3-traitlets (5.14.3+really5.14.3-1) ... 198s Setting up libasan8:ppc64el (14.2.0-8ubuntu1) ... 198s Setting up libjson-perl (4.10000-1) ... 198s Setting up libxslt1.1:ppc64el (1.1.39-0exp1ubuntu1) ... 198s Setting up debugedit (1:5.1-1) ... 198s Setting up libopenjp2-7:ppc64el (2.5.0-2ubuntu1) ... 198s Setting up python3.13-minimal (3.13.0-2) ... 200s Setting up libharfbuzz0b:ppc64el (10.0.1-1) ... 200s Setting up python3-dateutil (2.9.0-2) ... 200s Setting up sgml-base (1.31) ... 200s Setting up python3-msgpack (1.0.3-3build2) ... 200s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 200s Setting up python3-cachecontrol (0.14.0-1) ... 200s Setting up libtsan2:ppc64el (14.2.0-8ubuntu1) ... 200s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 200s Setting up python3-mpmath (1.3.0-1) ... 201s Setting up libisl23:ppc64el (0.27-1) ... 201s Setting up python-matplotlib-data (3.8.3-3) ... 201s Setting up libwebpmux3:ppc64el (1.4.0-0.1) ... 201s Setting up python3-appdirs (1.4.4-4) ... 201s Setting up libpython3.13-stdlib:ppc64el (3.13.0-2) ... 201s Setting up python3-stack-data (0.6.3-1) ... 202s Setting up libssw0:ppc64el (1.1-15) ... 202s Setting up python3-soupsieve (2.6-1) ... 202s Setting up libcc1-0:ppc64el (14.2.0-8ubuntu1) ... 202s Setting up liblsan0:ppc64el (14.2.0-8ubuntu1) ... 202s Setting up libsz2:ppc64el (1.1.3-1) ... 202s Setting up libitm1:ppc64el (14.2.0-8ubuntu1) ... 202s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 202s Setting up python3-imagesize (1.4.1-1) ... 202s Setting up python3-ptyprocess (0.7.0-6) ... 202s Setting up libpython3.13:ppc64el (3.13.0-2) ... 202s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 202s Setting up automake (1:1.16.5-1.3ubuntu1) ... 202s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 202s Setting up python3-prompt-toolkit (3.0.48-1) ... 203s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 203s Setting up python3-sympy (1.13.3-1) ... 218s Setting up liblapack3:ppc64el (3.12.0-3build2) ... 218s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 218s Setting up gettext (0.22.5-2) ... 218s Setting up python3-jedi (0.19.1+ds1-1) ... 219s Setting up libssw-dev:ppc64el (1.1-15) ... 219s Setting up python3.13 (3.13.0-2) ... 220s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 220s Setting up python3-pytest (8.3.3-1) ... 221s Setting up libwebpdemux2:ppc64el (1.4.0-0.1) ... 221s Setting up python3-all (3.12.7-1) ... 221s Setting up libpython3.12-dev:ppc64el (3.12.7-3) ... 221s Setting up python3-bs4 (4.12.3-3) ... 221s Setting up intltool-debian (0.35.0+20060710.6) ... 221s Setting up python3-matplotlib-inline (0.1.6-2) ... 221s Setting up python3-fs (2.4.16-4) ... 222s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 222s Setting up python3-pexpect (4.9-2) ... 222s Setting up libraqm0:ppc64el (0.10.1-1build1) ... 222s Setting up libpython3.13-dev:ppc64el (3.13.0-2) ... 222s Setting up python-scipy-doc (1.13.1-5) ... 222s Setting up python3.12-dev (3.12.7-3) ... 222s Setting up cpp-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 222s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 226s Setting up libjs-sphinxdoc (7.4.7-4) ... 226s Setting up cpp-14 (14.2.0-8ubuntu1) ... 226s Setting up dh-strip-nondeterminism (1.14.0-1) ... 226s Setting up python3-hdmedians (0.14.2-5.1build1) ... 227s Setting up python3-lxml:ppc64el (5.3.0-1) ... 227s Setting up libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ... 227s Setting up xml-core (0.19) ... 227s Setting up python3-contourpy (1.3.0-2) ... 227s Setting up libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ... 227s Setting up libgcc-14-dev:ppc64el (14.2.0-8ubuntu1) ... 227s Setting up python3.12-doc (3.12.7-3) ... 227s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 227s Setting up libstdc++-14-dev:ppc64el (14.2.0-8ubuntu1) ... 227s Setting up python3-statsmodels-lib:ppc64el (0.14.4+dfsg-1) ... 227s Setting up python3-doc (3.12.7-1) ... 227s Setting up cpp-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 227s Setting up gcc-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 227s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 227s Setting up python-numpy-doc (1:1.26.4+ds-11build1) ... 227s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 227s Setting up libxft2:ppc64el (2.3.6-1build1) ... 227s Setting up python3-scipy (1.13.1-5) ... 235s Setting up libpython3-dev:ppc64el (3.12.7-1) ... 235s Setting up g++-14-powerpc64le-linux-gnu (14.2.0-8ubuntu1) ... 235s Setting up python-pandas-doc (2.2.3+dfsg-5) ... 235s Setting up python3.13-dev (3.13.0-2) ... 235s Setting up po-debconf (1.0.21+nmu1) ... 235s Setting up libtk8.6:ppc64el (8.6.15-1) ... 235s Setting up python3-pandas-lib:ppc64el (2.2.3+dfsg-5) ... 235s Setting up python3.12-tk (3.12.7-3) ... 236s Setting up python3-sklearn-lib:ppc64el (1.4.2+dfsg-6) ... 236s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 236s Setting up python3.13-tk (3.13.0-2) ... 236s Setting up gcc-14 (14.2.0-8ubuntu1) ... 236s Setting up python-biom-format-doc (2.1.16-1) ... 236s Setting up python3-patsy (0.5.6-1) ... 237s Setting up python-skbio-doc (0.6.2-3) ... 237s Setting up python3-pil:ppc64el (10.4.0-1ubuntu1) ... 237s Setting up python3-pandas (2.2.3+dfsg-5) ... 249s Setting up gcc-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 249s Setting up libpython3-all-dev:ppc64el (3.12.7-1) ... 249s Setting up python3-ipython (8.20.0-1ubuntu1) ... 250s Setting up sphinx-common (7.4.7-4) ... 250s Setting up python3-dev (3.12.7-1) ... 250s Setting up python3-h5py (3.11.0-5ubuntu1) ... 251s Setting up python3-sklearn (1.4.2+dfsg-6) ... 255s Setting up python3-statsmodels (0.14.4+dfsg-1) ... 262s Setting up cpp (4:14.1.0-2ubuntu1) ... 262s Setting up g++-14 (14.2.0-8ubuntu1) ... 262s Setting up g++-powerpc64le-linux-gnu (4:14.1.0-2ubuntu1) ... 262s Setting up python3-all-dev (3.12.7-1) ... 262s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 262s Setting up libtool (2.4.7-7build1) ... 262s Setting up blt (2.5.3+dfsg-7build1) ... 262s Setting up python3-tk:ppc64el (3.12.7-1) ... 262s Setting up gcc (4:14.1.0-2ubuntu1) ... 262s Setting up dh-autoreconf (20) ... 262s Setting up python3-biom-format (2.1.16-1) ... 262s Setting up python3-pil.imagetk:ppc64el (10.4.0-1ubuntu1) ... 263s Setting up python3-skbio (0.6.2-3) ... 264s Setting up g++ (4:14.1.0-2ubuntu1) ... 264s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 264s Setting up build-essential (12.10ubuntu1) ... 264s Setting up debhelper (13.20ubuntu1) ... 264s Setting up pybuild-plugin-autopkgtest (6.20241024) ... 264s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 264s Setting up python3-fonttools (4.46.0-1build2) ... 267s Setting up python3-matplotlib (3.8.3-3) ... 270s Processing triggers for libc-bin (2.40-1ubuntu3) ... 270s Processing triggers for systemd (256.5-2ubuntu4) ... 270s Processing triggers for man-db (2.12.1-3) ... 272s Processing triggers for install-info (7.1.1-1) ... 273s Processing triggers for sgml-base (1.31) ... 273s Setting up docutils-common (0.21.2+dfsg-2) ... 273s Processing triggers for sgml-base (1.31) ... 273s Setting up python3-docutils (0.21.2+dfsg-2) ... 274s Setting up python3-sphinx (7.4.7-4) ... 275s Setting up python3-sphinx-copybutton (0.5.2-2) ... 276s Setting up python3-sphinx-design (0.6.1-1) ... 276s Setting up python3-numpydoc (1.6.0-2) ... 276s Setting up python3-pydata-sphinx-theme (0.15.4+dfsg-2) ... 276s Setting up autopkgtest-satdep (0) ... 284s (Reading database ... 117421 files and directories currently installed.) 284s Removing autopkgtest-satdep (0) ... 284s autopkgtest [23:44:53]: test pybuild-autopkgtest: pybuild-autopkgtest 284s autopkgtest [23:44:53]: test pybuild-autopkgtest: [----------------------- 285s pybuild-autopkgtest 285s I: pybuild base:311: cd /tmp/autopkgtest.JvfSqh/autopkgtest_tmp/build; python3.13 -m pytest --pyargs skbio 286s ERROR: while parsing the following warning configuration: 286s 286s ignore::skbio.util.SkbioWarning 286s 286s This error occurred: 286s 286s Traceback (most recent call last): 286s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 24, in 286s from . import _debian_h5py_serial as _h5py 286s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py", line 25, in 286s from . import _errors 286s ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 286s 286s During handling of the above exception, another exception occurred: 286s 286s Traceback (most recent call last): 286s File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1917, in parse_warning_filter 286s category: type[Warning] = _resolve_warning_category(category_) 286s ~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ 286s File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1955, in _resolve_warning_category 286s m = __import__(module, None, None, [klass]) 286s File "/usr/lib/python3/dist-packages/skbio/__init__.py", line 12, in 286s import skbio.io # noqa 286s ^^^^^^^^^^^^^^^ 286s File "/usr/lib/python3/dist-packages/skbio/io/__init__.py", line 251, in 286s from .registry import write, read, sniff, create_format, io_registry 286s File "/usr/lib/python3/dist-packages/skbio/io/registry.py", line 181, in 286s from .util import _resolve_file, open_file, open_files, _d as _open_kwargs 286s File "/usr/lib/python3/dist-packages/skbio/io/util.py", line 32, in 286s from skbio.io._iosources import get_io_sources, get_compression_handler 286s File "/usr/lib/python3/dist-packages/skbio/io/_iosources.py", line 18, in 286s from ._fileobject import ( 286s ...<3 lines>... 286s ) 286s File "/usr/lib/python3/dist-packages/skbio/io/_fileobject.py", line 10, in 286s import h5py 286s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 26, in 286s from . import _debian_h5py_mpi as _h5py 286s ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 286s 286s 286s E: pybuild pybuild:389: test: plugin distutils failed with: exit code=4: cd /tmp/autopkgtest.JvfSqh/autopkgtest_tmp/build; python3.13 -m pytest --pyargs skbio 286s I: pybuild base:311: cd /tmp/autopkgtest.JvfSqh/autopkgtest_tmp/build; python3.12 -m pytest --pyargs skbio 290s ============================= test session starts ============================== 290s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 290s rootdir: /tmp/autopkgtest.JvfSqh/autopkgtest_tmp/build 290s configfile: pyproject.toml 290s plugins: typeguard-4.4.1 290s collected 2793 items 290s 290s alignment/tests/test_pairwise.py ......................... [ 0%] 290s alignment/tests/test_path.py ................. [ 1%] 290s alignment/tests/test_ssw.py ........................... [ 2%] 290s alignment/tests/test_tabular_msa.py .................................... [ 3%] 291s ........................................................................ [ 6%] 292s ........................................................................ [ 8%] 293s ........................................................................ [ 11%] 294s ........................................................................ [ 14%] 294s ........................................................................ [ 16%] 294s ..... [ 16%] 294s diversity/alpha/tests/test_ace.py .. [ 16%] 297s diversity/alpha/tests/test_base.py ............................... [ 18%] 297s diversity/alpha/tests/test_chao1.py ... [ 18%] 297s diversity/alpha/tests/test_gini.py .... [ 18%] 303s diversity/alpha/tests/test_lladser.py ............ [ 18%] 303s diversity/alpha/tests/test_pd.py ................ [ 19%] 303s diversity/beta/tests/test_unifrac.py ............................ [ 20%] 303s diversity/tests/test_block.py ........... [ 20%] 303s diversity/tests/test_driver.py ..................................... [ 21%] 303s diversity/tests/test_util.py ................ [ 22%] 303s embedding/tests/test_embedding.py ................... [ 23%] 303s embedding/tests/test_protein.py .............. [ 23%] 303s io/format/tests/test_base.py ................................ [ 24%] 303s io/format/tests/test_binary_dm.py ......... [ 25%] 303s io/format/tests/test_biom.py ... [ 25%] 304s io/format/tests/test_blast6.py ........... [ 25%] 304s io/format/tests/test_blast7.py .............. [ 26%] 304s io/format/tests/test_clustal.py ............. [ 26%] 304s io/format/tests/test_embed.py ........ [ 26%] 306s io/format/tests/test_embl.py ............................... [ 28%] 306s io/format/tests/test_emptyfile.py .. [ 28%] 311s io/format/tests/test_fasta.py ................ [ 28%] 315s io/format/tests/test_fastq.py ............... [ 29%] 316s io/format/tests/test_genbank.py ..................... [ 30%] 316s io/format/tests/test_gff3.py ........................ [ 30%] 316s io/format/tests/test_lsmat.py ....... [ 31%] 316s io/format/tests/test_newick.py ....... [ 31%] 317s io/format/tests/test_ordination.py ..... [ 31%] 318s io/format/tests/test_phylip.py ....... [ 31%] 318s io/format/tests/test_qseq.py ...... [ 32%] 318s io/format/tests/test_sample_metadata.py .... [ 32%] 318s io/format/tests/test_sequence_feature_vocabulary.py .... [ 32%] 319s io/format/tests/test_stockholm.py ...................................... [ 33%] 319s ..................................... [ 34%] 319s io/format/tests/test_taxdump.py ...... [ 35%] 319s io/tests/test_iosources.py .......... [ 35%] 320s io/tests/test_registry.py .............................................. [ 37%] 320s ................................................ [ 38%] 322s io/tests/test_util.py .........................................sssssssss [ 40%] 324s sssssssssssssssssssss................................................... [ 43%] 328s ........................................................................ [ 45%] 329s .......................... [ 46%] 330s metadata/tests/test_enan.py ... [ 46%] 331s metadata/tests/test_intersection.py ............... [ 47%] 331s metadata/tests/test_interval.py ........................................ [ 48%] 331s ............................... [ 49%] 332s metadata/tests/test_io.py .............................................. [ 51%] 332s ............................................................ [ 53%] 333s metadata/tests/test_metadata.py ........................................ [ 55%] 333s .................... [ 55%] 333s metadata/tests/test_metadata_column.py ................................. [ 57%] 333s ........................................ [ 58%] 333s metadata/tests/test_missing.py ................ [ 59%] 333s metadata/tests/test_mixin.py ........................................... [ 60%] 333s ....................................................... [ 62%] 333s sequence/tests/test_alphabet.py ..... [ 62%] 333s sequence/tests/test_distance.py .......................... [ 63%] 333s sequence/tests/test_dna.py ... [ 63%] 333s sequence/tests/test_genetic_code.py .......................... [ 64%] 333s sequence/tests/test_grammared_sequence.py .............................. [ 65%] 333s ................... [ 66%] 333s sequence/tests/test_nucleotide_sequences.py ............................ [ 67%] 333s . [ 67%] 333s sequence/tests/test_protein.py ........... [ 67%] 333s sequence/tests/test_rna.py ... [ 68%] 333s sequence/tests/test_sequence.py ........................................ [ 69%] 333s ........................................................................ [ 72%] 333s ........................................................................ [ 74%] 334s ........................................................................ [ 77%] 334s ....... [ 77%] 334s sequence/tests/test_substitution.py ........ [ 77%] 334s stats/distance/tests/test_anosim.py .... [ 77%] 334s stats/distance/tests/test_base.py ...................................... [ 79%] 334s .......................................................... [ 81%] 352s stats/distance/tests/test_bioenv.py ................. [ 81%] 356s stats/distance/tests/test_mantel.py .................................... [ 83%] 356s ........ [ 83%] 356s stats/distance/tests/test_permanova.py ..... [ 83%] 371s stats/distance/tests/test_permdisp.py .............. [ 84%] 371s stats/evolve/tests/test_hommola.py ............ [ 84%] 371s stats/ordination/tests/test_canonical_correspondence_analysis.py ...... [ 84%] 371s stats/ordination/tests/test_correspondence_analysis.py ........ [ 85%] 371s stats/ordination/tests/test_ordination_results.py ............. [ 85%] 371s stats/ordination/tests/test_principal_coordinate_analysis.py ........... [ 86%] 371s . [ 86%] 371s stats/ordination/tests/test_redundancy_analysis.py .... [ 86%] 371s stats/ordination/tests/test_util.py .......... [ 86%] 372s stats/tests/test_composition.py ........................................ [ 87%] 392s .......................................... [ 89%] 393s stats/tests/test_gradient.py .......................... [ 90%] 393s stats/tests/test_misc.py ... [ 90%] 396s stats/tests/test_power.py ........................................... [ 92%] 397s stats/tests/test_subsample.py ............ [ 92%] 397s table/tests/test_base.py . [ 92%] 397s tests/test_base.py ..... [ 92%] 397s tests/test_workflow.py ................. [ 93%] 397s tree/tests/test_majority_rule.py ...... [ 93%] 398s tree/tests/test_nj.py ............................ [ 94%] 399s tree/tests/test_tree.py ................................................ [ 96%] 399s ........................................................ [ 98%] 399s util/tests/test_decorator.py ........ [ 98%] 399s util/tests/test_misc.py .................... [ 99%] 400s util/tests/test_plotting.py ...... [ 99%] 400s util/tests/test_testing.py ............... [100%] 400s 400s =============================== warnings summary =============================== 400s alignment/tests/test_pairwise.py::PairwiseAlignmentTests::test_compute_score_and_traceback_matrices 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:56: DeprecationWarning: make_identity_substitution_matrix is deprecated as of 0.4.0. It has been replaced by the SubstitutionMatrix class. Additional details at https://github.com/scikit-bio/scikit-bio/pull/1913. 400s warn( 400s 400s alignment/tests/test_ssw.py::TestAlignStripedSmithWaterman::test_invalid_type 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:56: DeprecationWarning: local_pairwise_align_ssw is deprecated as of 0.5.8. It will be removed in favor of more general purpose and performant aligners. Additional details at https://github.com/scikit-bio/scikit-bio/issues/1814. 400s warn( 400s 400s alignment/tests/test_tabular_msa.py::TestGapFrequencies::test_no_positions_relative 400s /usr/lib/python3/dist-packages/skbio/alignment/_tabular_msa.py:1648: RuntimeWarning: invalid value encountered in divide 400s gap_freqs /= length 400s 400s diversity/tests/test_block.py::ParallelBetaDiversity::test_block_beta_diversity 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:56: DeprecationWarning: partial_beta_diversity is deprecated as of 0.5.0. The return type is unstable. Developer caution is advised. The resulting DistanceMatrix object will include zeros when distance has not been calculated, and therefore can be misleading. 400s warn( 400s 400s metadata/tests/test_io.py: 10 warnings 400s /usr/lib/python3/dist-packages/skbio/metadata/io.py:411: FutureWarning: Downcasting behavior in `replace` is deprecated and will be removed in a future version. To retain the old behavior, explicitly call `result.infer_objects(copy=False)`. To opt-in to the future behavior, set `pd.set_option('future.no_silent_downcasting', True)` 400s series = series.replace("", np.nan) 400s 400s metadata/tests/test_io.py::TestSave::test_numeric_metadata_column_insdc_missing 400s metadata/tests/test_metadata_column.py::TestToSeries::test_encode_missing_true 400s metadata/tests/test_metadata_column.py::TestToDataframe::test_encode_missing_true 400s /usr/lib/python3/dist-packages/skbio/metadata/_metadata.py:1102: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise an error in a future version of pandas. Value '['missing']' has dtype incompatible with float64, please explicitly cast to a compatible dtype first. 400s series[missing.index] = missing 400s 400s metadata/tests/test_missing.py::TestISNDC::test_roundtrip_all_missing_object 400s metadata/tests/test_missing.py::TestOmitted::test_roundtrip_all_missing_object 400s /usr/lib/python3/dist-packages/skbio/metadata/tests/test_missing.py:53: FutureWarning: Mismatched null-like values nan and None found. In a future version, pandas equality-testing functions (e.g. assert_frame_equal) will consider these not-matching and raise. 400s pdt.assert_series_equal(missing, series.astype(object)) 400s 400s metadata/tests/test_missing.py::TestOmitted::test_roundtrip_bool 400s metadata/tests/test_missing.py::TestOmitted::test_roundtrip_string 400s /usr/lib/python3/dist-packages/skbio/metadata/tests/test_missing.py:31: FutureWarning: Mismatched null-like values nan and None found. In a future version, pandas equality-testing functions (e.g. assert_frame_equal) will consider these not-matching and raise. 400s pdt.assert_series_equal(missing, series[1:].astype(object)) 400s 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_has_nondegenerates 400s /usr/lib/python3/dist-packages/skbio/sequence/_grammared_sequence.py:639: DeprecationWarning: has_nondegenerates is deprecated as of 0.5.0 400s warn("has_nondegenerates is deprecated as of 0.5.0", DeprecationWarning) 400s 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerate_chars 400s sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars 400s sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars 400s sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars 400s sequence/tests/test_nucleotide_sequences.py::TestNucleotideSequence::test_nondegenerate_chars 400s sequence/tests/test_protein.py::TestProtein::test_nondegenerate_chars 400s sequence/tests/test_protein.py::TestProtein::test_nondegenerate_chars 400s /usr/lib/python3/dist-packages/skbio/sequence/_grammared_sequence.py:313: DeprecationWarning: nondegenerate_chars is deprecated as of 0.5.0 400s warn("nondegenerate_chars is deprecated as of 0.5.0", DeprecationWarning) 400s 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s sequence/tests/test_grammared_sequence.py::TestGrammaredSequence::test_nondegenerates 400s /usr/lib/python3/dist-packages/skbio/sequence/_grammared_sequence.py:572: DeprecationWarning: nondenengerates is deprecated as of 0.5.0. 400s warn("nondenengerates is deprecated as of 0.5.0.", DeprecationWarning) 400s 400s sequence/tests/test_sequence.py::TestSequence::test_frequencies_empty_sequence 400s /usr/lib/python3/dist-packages/skbio/sequence/_sequence.py:1824: RuntimeWarning: invalid value encountered in divide 400s obs_counts = obs_counts / len(self) 400s 400s stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_pearson 400s /usr/lib/python3/dist-packages/skbio/stats/distance/_mantel.py:364: ConstantInputWarning: All values in data are exactly equal; results may not be reliable. 400s warnings.warn(ConstantInputWarning()) 400s 400s stats/distance/tests/test_mantel.py::MantelTests::test_no_variation_spearman 400s /usr/lib/python3/dist-packages/skbio/stats/distance/_mantel.py:483: ConstantInputWarning: All values in data are exactly equal; results may not be reliable. 400s warnings.warn(ConstantInputWarning()) 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_call_via_series 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_call_via_series 400s /usr/lib/python3/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.006573677549550482 and the largest is 0.17668321589384078. 400s warn( 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_eq_groups 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_no_permuations 400s /usr/lib/python3/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -13.541846544269617 and the largest is 16.587201374785895. 400s warn( 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_mixedgroups 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_uneq_groups 400s /usr/lib/python3/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -15.629533932395201 and the largest is 20.903154277938906. 400s warn( 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null 400s /usr/lib/python3/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py:190: RuntimeWarning: invalid value encountered in divide 400s proportion_explained = eigvals / sum_eigenvalues 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_centroids_null 400s /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:563: ConstantInputWarning: Each of the input arrays is constant; the F statistic is not defined or infinite 400s res = hypotest_fun_out(*samples, axis=axis, **kwds) 400s 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results 400s stats/distance/tests/test_permdisp.py::testPERMDISP::test_confirm_betadispr_results 400s /usr/lib/python3/dist-packages/skbio/stats/ordination/_principal_coordinate_analysis.py:146: RuntimeWarning: The result contains negative eigenvalues. Please compare their magnitude with the magnitude of some of the largest positive eigenvalues. If the negative ones are smaller, it's probably safe to ignore them, but if they are large in magnitude, the results won't be useful. See the Notes section for more details. The smallest eigenvalue is -0.007758325147780548 and the largest is 2.7077929489469246. 400s warn( 400s 400s stats/ordination/tests/test_redundancy_analysis.py::TestRDAErrors::test_shape 400s /usr/lib/python3.12/unittest/case.py:690: DeprecationWarning: It is deprecated to return a value that is not None from a test case (>) 400s return self.run(*args, **kwds) 400s 400s stats/tests/test_composition.py::CompositionTests::test_multiplicative_replacement 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:60: UserWarning: multiplicative_replacement is deprecated as of 0.6.0. 400s warn(f"{func.__name__} is deprecated as of {ver}.") 400s 400s stats/tests/test_composition.py::AncomTests::test_ancom_alternative_test 400s /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:531: RuntimeWarning: Precision loss occurred in moment calculation due to catastrophic cancellation. This occurs when the data are nearly identical. Results may be unreliable. 400s res = hypotest_fun_out(*samples, **kwds) 400s 400s stats/tests/test_composition.py::AncomTests::test_ancom_multiple_comparisons_deprecated 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:60: UserWarning: ancom is deprecated as of 0.6.0. 400s warn(f"{func.__name__} is deprecated as of {ver}.") 400s 400s stats/tests/test_composition.py::AncomTests::test_ancom_no_signal 400s /usr/lib/python3/dist-packages/scipy/stats/_axis_nan_policy.py:531: ConstantInputWarning: Each of the input arrays is constant; the F statistic is not defined or infinite 400s res = hypotest_fun_out(*samples, **kwds) 400s 400s stats/tests/test_composition.py::VLRTests::test_pairwise_vlr 400s /usr/lib/python3/dist-packages/skbio/stats/composition.py:947: RuntimeWarning: divide by zero encountered in log 400s X_log = np.log(mat) 400s 400s stats/tests/test_composition.py::VLRTests::test_pairwise_vlr 400s /usr/lib/python3/dist-packages/numpy/lib/function_base.py:2742: RuntimeWarning: invalid value encountered in subtract 400s X -= avg[:, None] 400s 400s stats/tests/test_composition.py::VLRTests::test_vlr 400s /usr/lib/python3/dist-packages/skbio/stats/composition.py:831: RuntimeWarning: divide by zero encountered in log 400s x = np.log(x) 400s 400s stats/tests/test_composition.py::VLRTests::test_vlr 400s /usr/lib/python3/dist-packages/numpy/core/_methods.py:173: RuntimeWarning: invalid value encountered in subtract 400s x = asanyarray(arr - arrmean) 400s 400s stats/tests/test_gradient.py::GradientTests::test_weight_by_vector 400s /usr/lib/python3/dist-packages/skbio/stats/gradient.py:167: FutureWarning: Setting an item of incompatible dtype is deprecated and will raise an error in a future version of pandas. Value '6.357142857142857' has dtype incompatible with int64, please explicitly cast to a compatible dtype first. 400s trajectories.loc[idx] = ( 400s 400s tree/tests/test_tree.py::TreeTests::test_root_at 400s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:1327: FutureWarning: The default behavior of `root_at` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `reset=True, branch_attrs=[], root_name=None`. 400s warn( 400s 400s tree/tests/test_tree.py::TreeTests::test_root_at 400s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:776: FutureWarning: The default behavior of `unrooted_copy` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `branch_attrs={"length", "support"}, root_name=None`. 400s warn( 400s 400s tree/tests/test_tree.py::TreeTests::test_root_at_midpoint 400s /usr/lib/python3/dist-packages/skbio/tree/_tree.py:1472: FutureWarning: The default behavior of `root_at_midpoint` is subject to change in 0.7.0. The new default behavior can be achieved by specifying `reset=True, branch_attrs=[], root_name=None`. 400s warn( 400s 400s tree/tests/test_tree.py::TreeTests::test_unrooted_deepcopy 400s /usr/lib/python3/dist-packages/skbio/util/_warning.py:56: DeprecationWarning: unrooted_deepcopy is deprecated as of 0.6.2. Use unrooted_copy instead. 400s warn( 400s 400s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 400s ========== 2763 passed, 30 skipped, 70 warnings in 112.31s (0:01:52) =========== 400s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 400s make: *** [/tmp/7Efn3Gilqv/run:4: pybuild-autopkgtest] Error 25 400s pybuild-autopkgtest: error: /tmp/7Efn3Gilqv/run pybuild-autopkgtest returned exit code 2 400s autopkgtest [23:46:49]: test pybuild-autopkgtest: -----------------------] 401s pybuild-autopkgtest FAIL non-zero exit status 25 401s autopkgtest [23:46:50]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 401s autopkgtest [23:46:50]: @@@@@@@@@@@@@@@@@@@@ summary 401s pybuild-autopkgtest FAIL non-zero exit status 25 412s nova [W] Using flock in prodstack6-ppc64el 412s Creating nova instance adt-plucky-ppc64el-python-skbio-20241113-234009-juju-7f2275-prod-proposed-migration-environment-20-d22db9cf-c04e-43a3-bfe8-5de75c6420b5 from image adt/ubuntu-plucky-ppc64el-server-20241113.img (UUID 0c5715b6-5cca-4485-b8bf-b85dfd917a5f)...