0s autopkgtest [19:13:20]: starting date and time: 2024-11-01 19:13:20+0000 0s autopkgtest [19:13:20]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [19:13:20]: host juju-7f2275-prod-proposed-migration-environment-14; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0f_n5cel/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python-dateutil --apt-upgrade pynwb --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python-dateutil/2.9.0-3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-14@bos03-ppc64el-5.secgroup --name adt-plucky-ppc64el-pynwb-20241101-191320-juju-7f2275-prod-proposed-migration-environment-14-df44b580-c8de-46df-8e8c-ceb65fb4e6d2 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-14 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 136s autopkgtest [19:15:36]: testbed dpkg architecture: ppc64el 136s autopkgtest [19:15:36]: testbed apt version: 2.9.8 136s autopkgtest [19:15:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup 137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 138s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [183 kB] 138s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2775 kB] 138s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [44.0 kB] 138s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 138s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [221 kB] 138s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [1753 kB] 138s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [23.2 kB] 139s Fetched 5081 kB in 2s (2971 kB/s) 139s Reading package lists... 142s Reading package lists... 142s Building dependency tree... 142s Reading state information... 143s Calculating upgrade... 143s The following packages will be upgraded: 143s libevdev2 libftdi1-2 libinih1 nano python3-lazr.uri 143s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s Need to get 422 kB of archives. 143s After this operation, 17.4 kB of additional disk space will be used. 143s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el libevdev2 ppc64el 1.13.3+dfsg-1 [39.2 kB] 143s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el nano ppc64el 8.2-1 [329 kB] 143s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el libftdi1-2 ppc64el 1.5-7 [32.1 kB] 143s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libinih1 ppc64el 58-1ubuntu1 [7816 B] 143s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-lazr.uri all 1.0.6-4 [13.6 kB] 144s Fetched 422 kB in 0s (861 kB/s) 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73549 files and directories currently installed.) 144s Preparing to unpack .../libevdev2_1.13.3+dfsg-1_ppc64el.deb ... 144s Unpacking libevdev2:ppc64el (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 144s Preparing to unpack .../nano_8.2-1_ppc64el.deb ... 144s Unpacking nano (8.2-1) over (8.1-1) ... 144s Preparing to unpack .../libftdi1-2_1.5-7_ppc64el.deb ... 144s Unpacking libftdi1-2:ppc64el (1.5-7) over (1.5-6build5) ... 144s Preparing to unpack .../libinih1_58-1ubuntu1_ppc64el.deb ... 144s Unpacking libinih1:ppc64el (58-1ubuntu1) over (55-1ubuntu2) ... 144s Preparing to unpack .../python3-lazr.uri_1.0.6-4_all.deb ... 145s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 145s Setting up libinih1:ppc64el (58-1ubuntu1) ... 145s Setting up python3-lazr.uri (1.0.6-4) ... 145s Setting up libftdi1-2:ppc64el (1.5-7) ... 145s Setting up nano (8.2-1) ... 145s Setting up libevdev2:ppc64el (1.13.3+dfsg-1) ... 145s Processing triggers for man-db (2.12.1-3) ... 146s Processing triggers for install-info (7.1.1-1) ... 146s Processing triggers for libc-bin (2.40-1ubuntu3) ... 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 148s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 148s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 148s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 148s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 149s Reading package lists... 149s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s Calculating upgrade... 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 150s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s autopkgtest [19:15:54]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 154s autopkgtest [19:15:54]: @@@@@@@@@@@@@@@@@@@@ apt-source pynwb 156s Get:1 http://ftpmaster.internal/ubuntu plucky/universe pynwb 2.5.0-1 (dsc) [2156 B] 156s Get:2 http://ftpmaster.internal/ubuntu plucky/universe pynwb 2.5.0-1 (tar) [621 kB] 156s Get:3 http://ftpmaster.internal/ubuntu plucky/universe pynwb 2.5.0-1 (diff) [6328 B] 156s gpgv: Signature made Fri Dec 22 15:42:20 2023 UTC 156s gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA 156s gpgv: Can't check signature: No public key 156s dpkg-source: warning: cannot verify inline signature for ./pynwb_2.5.0-1.dsc: no acceptable signature found 156s autopkgtest [19:15:56]: testing package pynwb version 2.5.0-1 157s autopkgtest [19:15:57]: build not needed 158s autopkgtest [19:15:58]: test autodep8-python3: preparing testbed 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 160s Starting pkgProblemResolver with broken count: 0 160s Starting 2 pkgProblemResolver with broken count: 0 160s Done 160s The following additional packages will be installed: 160s libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 liblapack3 160s liblbfgsb0 liblzf1 libsz2 python3-all python3-dateutil python3-decorator 160s python3-h5py python3-h5py-serial python3-hdmf python3-numpy python3-pandas 160s python3-pandas-lib python3-pynwb python3-ruamel.yaml 160s python3-ruamel.yaml.clib python3-scipy python3-tz 160s Suggested packages: 160s python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-pytest 160s python-pandas-doc python3-statsmodels python-scipy-doc 160s Recommended packages: 160s python3-matplotlib python3-bottleneck python3-numexpr python3-odf 160s python3-openpyxl python3-bs4 python3-html5lib python3-lxml python3-tables 160s g++ | c++-compiler python3-pil 160s The following NEW packages will be installed: 160s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1t64 160s libhdf5-hl-100t64 liblapack3 liblbfgsb0 liblzf1 libsz2 python3-all 160s python3-dateutil python3-decorator python3-h5py python3-h5py-serial 160s python3-hdmf python3-numpy python3-pandas python3-pandas-lib python3-pynwb 160s python3-ruamel.yaml python3-ruamel.yaml.clib python3-scipy python3-tz 160s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 160s Need to get 37.5 MB/37.5 MB of archives. 160s After this operation, 180 MB of additional disk space will be used. 160s Get:1 /tmp/autopkgtest.bSYb1k/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 161s Get:2 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 161s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-3build2 [222 kB] 161s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-7ubuntu1 [571 kB] 161s Get:5 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 161s Get:6 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4ubuntu3 [1387 kB] 161s Get:7 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4ubuntu3 [71.2 kB] 161s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-3build2 [2806 kB] 161s Get:9 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 161s Get:10 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 161s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-all ppc64el 3.12.6-0ubuntu1 [888 B] 161s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-dateutil all 2.9.0-3 [80.2 kB] 161s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 161s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11build1 [4434 kB] 162s Get:15 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py-serial ppc64el 3.11.0-5ubuntu1 [1159 kB] 162s Get:16 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py all 3.11.0-5ubuntu1 [7974 B] 162s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-tz all 2024.1-2 [31.4 kB] 162s Get:18 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas-lib ppc64el 2.2.2+dfsg-4 [4602 kB] 162s Get:19 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas all 2.2.2+dfsg-4 [3111 kB] 162s Get:20 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-scipy ppc64el 1.13.1-3 [18.3 MB] 163s Get:21 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-ruamel.yaml.clib ppc64el 0.2.8+ds-2 [161 kB] 163s Get:22 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-ruamel.yaml all 0.18.6+ds-3 [126 kB] 163s Get:23 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-hdmf all 3.11.0-2 [270 kB] 163s Get:24 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pynwb all 2.5.0-1 [109 kB] 164s Fetched 37.5 MB in 3s (14.2 MB/s) 164s Selecting previously unselected package libaec0:ppc64el. 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73549 files and directories currently installed.) 164s Preparing to unpack .../00-libaec0_1.1.3-1_ppc64el.deb ... 164s Unpacking libaec0:ppc64el (1.1.3-1) ... 164s Selecting previously unselected package libblas3:ppc64el. 164s Preparing to unpack .../01-libblas3_3.12.0-3build2_ppc64el.deb ... 164s Unpacking libblas3:ppc64el (3.12.0-3build2) ... 164s Selecting previously unselected package libgfortran5:ppc64el. 164s Preparing to unpack .../02-libgfortran5_14.2.0-7ubuntu1_ppc64el.deb ... 164s Unpacking libgfortran5:ppc64el (14.2.0-7ubuntu1) ... 164s Selecting previously unselected package libsz2:ppc64el. 164s Preparing to unpack .../03-libsz2_1.1.3-1_ppc64el.deb ... 164s Unpacking libsz2:ppc64el (1.1.3-1) ... 164s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 164s Preparing to unpack .../04-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 164s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 164s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 164s Preparing to unpack .../05-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 164s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 164s Selecting previously unselected package liblapack3:ppc64el. 164s Preparing to unpack .../06-liblapack3_3.12.0-3build2_ppc64el.deb ... 164s Unpacking liblapack3:ppc64el (3.12.0-3build2) ... 164s Selecting previously unselected package liblbfgsb0:ppc64el. 164s Preparing to unpack .../07-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 164s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 164s Selecting previously unselected package liblzf1:ppc64el. 164s Preparing to unpack .../08-liblzf1_3.6-4_ppc64el.deb ... 164s Unpacking liblzf1:ppc64el (3.6-4) ... 164s Selecting previously unselected package python3-all. 164s Preparing to unpack .../09-python3-all_3.12.6-0ubuntu1_ppc64el.deb ... 164s Unpacking python3-all (3.12.6-0ubuntu1) ... 164s Selecting previously unselected package python3-dateutil. 164s Preparing to unpack .../10-python3-dateutil_2.9.0-3_all.deb ... 164s Unpacking python3-dateutil (2.9.0-3) ... 164s Selecting previously unselected package python3-decorator. 164s Preparing to unpack .../11-python3-decorator_5.1.1-5_all.deb ... 164s Unpacking python3-decorator (5.1.1-5) ... 164s Selecting previously unselected package python3-numpy. 164s Preparing to unpack .../12-python3-numpy_1%3a1.26.4+ds-11build1_ppc64el.deb ... 164s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 164s Selecting previously unselected package python3-h5py-serial. 164s Preparing to unpack .../13-python3-h5py-serial_3.11.0-5ubuntu1_ppc64el.deb ... 164s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 164s Selecting previously unselected package python3-h5py. 164s Preparing to unpack .../14-python3-h5py_3.11.0-5ubuntu1_all.deb ... 164s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 164s Selecting previously unselected package python3-tz. 164s Preparing to unpack .../15-python3-tz_2024.1-2_all.deb ... 164s Unpacking python3-tz (2024.1-2) ... 164s Selecting previously unselected package python3-pandas-lib:ppc64el. 164s Preparing to unpack .../16-python3-pandas-lib_2.2.2+dfsg-4_ppc64el.deb ... 164s Unpacking python3-pandas-lib:ppc64el (2.2.2+dfsg-4) ... 165s Selecting previously unselected package python3-pandas. 165s Preparing to unpack .../17-python3-pandas_2.2.2+dfsg-4_all.deb ... 165s Unpacking python3-pandas (2.2.2+dfsg-4) ... 165s Selecting previously unselected package python3-scipy. 165s Preparing to unpack .../18-python3-scipy_1.13.1-3_ppc64el.deb ... 165s Unpacking python3-scipy (1.13.1-3) ... 166s Selecting previously unselected package python3-ruamel.yaml.clib:ppc64el. 166s Preparing to unpack .../19-python3-ruamel.yaml.clib_0.2.8+ds-2_ppc64el.deb ... 166s Unpacking python3-ruamel.yaml.clib:ppc64el (0.2.8+ds-2) ... 166s Selecting previously unselected package python3-ruamel.yaml. 166s Preparing to unpack .../20-python3-ruamel.yaml_0.18.6+ds-3_all.deb ... 166s Unpacking python3-ruamel.yaml (0.18.6+ds-3) ... 166s Selecting previously unselected package python3-hdmf. 166s Preparing to unpack .../21-python3-hdmf_3.11.0-2_all.deb ... 166s Unpacking python3-hdmf (3.11.0-2) ... 166s Selecting previously unselected package python3-pynwb. 166s Preparing to unpack .../22-python3-pynwb_2.5.0-1_all.deb ... 166s Unpacking python3-pynwb (2.5.0-1) ... 166s Selecting previously unselected package autopkgtest-satdep. 166s Preparing to unpack .../23-1-autopkgtest-satdep.deb ... 166s Unpacking autopkgtest-satdep (0) ... 166s Setting up python3-ruamel.yaml.clib:ppc64el (0.2.8+ds-2) ... 166s Setting up python3-all (3.12.6-0ubuntu1) ... 166s Setting up libaec0:ppc64el (1.1.3-1) ... 166s Setting up python3-tz (2024.1-2) ... 166s Setting up python3-decorator (5.1.1-5) ... 166s Setting up libblas3:ppc64el (3.12.0-3build2) ... 166s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 166s Setting up liblzf1:ppc64el (3.6-4) ... 166s Setting up libgfortran5:ppc64el (14.2.0-7ubuntu1) ... 166s Setting up python3-ruamel.yaml (0.18.6+ds-3) ... 166s Setting up python3-dateutil (2.9.0-3) ... 167s Setting up libsz2:ppc64el (1.1.3-1) ... 167s Setting up liblapack3:ppc64el (3.12.0-3build2) ... 167s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 167s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 169s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 169s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 169s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 169s Setting up python3-scipy (1.13.1-3) ... 174s Setting up python3-pandas-lib:ppc64el (2.2.2+dfsg-4) ... 174s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 174s Setting up python3-pandas (2.2.2+dfsg-4) ... 181s Setting up python3-h5py (3.11.0-5ubuntu1) ... 181s Setting up python3-hdmf (3.11.0-2) ... 182s /usr/lib/python3/dist-packages/hdmf/common/hdmf-common-schema/docs/source/conf.py:220: SyntaxWarning: invalid escape sequence '\s' 182s """ 182s Setting up python3-pynwb (2.5.0-1) ... 182s Setting up autopkgtest-satdep (0) ... 182s Processing triggers for man-db (2.12.1-3) ... 183s Processing triggers for libc-bin (2.40-1ubuntu3) ... 186s (Reading database ... 78102 files and directories currently installed.) 186s Removing autopkgtest-satdep (0) ... 186s autopkgtest [19:16:26]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import pynwb; print(pynwb)" ; done 186s autopkgtest [19:16:26]: test autodep8-python3: [----------------------- 187s Testing with python3.12: 189s 189s autopkgtest [19:16:29]: test autodep8-python3: -----------------------] 190s autodep8-python3 PASS (superficial) 190s autopkgtest [19:16:30]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 190s autopkgtest [19:16:30]: @@@@@@@@@@@@@@@@@@@@ summary 190s autodep8-python3 PASS (superficial) 195s nova [W] Using flock in prodstack6-ppc64el 195s flock: timeout while waiting to get lock 195s Creating nova instance adt-plucky-ppc64el-pynwb-20241101-191320-juju-7f2275-prod-proposed-migration-environment-14-df44b580-c8de-46df-8e8c-ceb65fb4e6d2 from image adt/ubuntu-plucky-ppc64el-server-20241101.img (UUID d479b61b-bfab-4ebe-8e06-591f77402620)...