0s autopkgtest [19:21:09]: starting date and time: 2024-11-13 19:21:09+0000 0s autopkgtest [19:21:09]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time 0s autopkgtest [19:21:09]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.b0ld2emy/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade picopore --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-ppc64el-22.secgroup --name adt-plucky-ppc64el-picopore-20241113-192109-juju-7f2275-prod-proposed-migration-environment-2-238f1c5a-6ee8-46c3-abbf-babb498e99fe --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 120s autopkgtest [19:23:09]: testbed dpkg architecture: ppc64el 120s autopkgtest [19:23:09]: testbed apt version: 2.9.8 120s autopkgtest [19:23:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 121s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 121s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 121s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 121s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [958 kB] 122s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [98.3 kB] 122s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [108 kB] 122s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [673 kB] 122s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [20.8 kB] 122s Fetched 1956 kB in 1s (1634 kB/s) 122s Reading package lists... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade... 126s The following NEW packages will be installed: 126s python3.13-gdbm 126s The following packages will be upgraded: 126s bpfcc-tools bpftrace libbpfcc libgnutls30t64 libjson-glib-1.0-0 126s libjson-glib-1.0-common libnewt0.52 libpython3-stdlib libutempter0 python3 126s python3-bpfcc python3-gdbm python3-minimal python3-newt whiptail 126s 15 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 126s Need to get 4700 kB of archives. 126s After this operation, 215 kB of additional disk space will be used. 126s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-minimal ppc64el 3.12.7-1 [27.4 kB] 126s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3 ppc64el 3.12.7-1 [24.0 kB] 126s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-stdlib ppc64el 3.12.7-1 [10.0 kB] 126s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgnutls30t64 ppc64el 3.8.8-2ubuntu1 [1072 kB] 127s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-newt ppc64el 0.52.24-2ubuntu4 [21.8 kB] 127s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el libnewt0.52 ppc64el 0.52.24-2ubuntu4 [62.1 kB] 127s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el whiptail ppc64el 0.52.24-2ubuntu4 [19.5 kB] 127s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-gdbm ppc64el 3.13.0-2 [31.5 kB] 127s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-gdbm ppc64el 3.12.7-1 [8640 B] 127s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libbpfcc ppc64el 0.30.0+ds-1ubuntu5 [696 kB] 127s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-bpfcc all 0.30.0+ds-1ubuntu5 [40.4 kB] 127s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpfcc-tools all 0.30.0+ds-1ubuntu5 [697 kB] 127s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpftrace ppc64el 0.21.2-2ubuntu2 [1898 kB] 127s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 127s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-0 ppc64el 1.10.0+ds-3 [76.0 kB] 127s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libutempter0 ppc64el 1.2.1-4 [9850 B] 127s Fetched 4700 kB in 1s (6054 kB/s) 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 128s Preparing to unpack .../python3-minimal_3.12.7-1_ppc64el.deb ... 128s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 128s Setting up python3-minimal (3.12.7-1) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 128s Preparing to unpack .../python3_3.12.7-1_ppc64el.deb ... 128s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 128s Preparing to unpack .../libpython3-stdlib_3.12.7-1_ppc64el.deb ... 128s Unpacking libpython3-stdlib:ppc64el (3.12.7-1) over (3.12.6-0ubuntu1) ... 129s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_ppc64el.deb ... 129s Unpacking libgnutls30t64:ppc64el (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 129s Setting up libgnutls30t64:ppc64el (3.8.8-2ubuntu1) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 129s Preparing to unpack .../00-python3-newt_0.52.24-2ubuntu4_ppc64el.deb ... 129s Unpacking python3-newt:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 129s Preparing to unpack .../01-libnewt0.52_0.52.24-2ubuntu4_ppc64el.deb ... 129s Unpacking libnewt0.52:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 129s Preparing to unpack .../02-whiptail_0.52.24-2ubuntu4_ppc64el.deb ... 129s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 129s Selecting previously unselected package python3.13-gdbm. 129s Preparing to unpack .../03-python3.13-gdbm_3.13.0-2_ppc64el.deb ... 129s Unpacking python3.13-gdbm (3.13.0-2) ... 129s Preparing to unpack .../04-python3-gdbm_3.12.7-1_ppc64el.deb ... 129s Unpacking python3-gdbm:ppc64el (3.12.7-1) over (3.12.6-1ubuntu1) ... 129s Preparing to unpack .../05-libbpfcc_0.30.0+ds-1ubuntu5_ppc64el.deb ... 129s Unpacking libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 129s Preparing to unpack .../06-python3-bpfcc_0.30.0+ds-1ubuntu5_all.deb ... 129s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 129s Preparing to unpack .../07-bpfcc-tools_0.30.0+ds-1ubuntu5_all.deb ... 129s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 129s Preparing to unpack .../08-bpftrace_0.21.2-2ubuntu2_ppc64el.deb ... 129s Unpacking bpftrace (0.21.2-2ubuntu2) over (0.21.2-2) ... 130s Preparing to unpack .../09-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 130s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 130s Preparing to unpack .../10-libjson-glib-1.0-0_1.10.0+ds-3_ppc64el.deb ... 130s Unpacking libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) over (1.10.0+ds-2) ... 130s Preparing to unpack .../11-libutempter0_1.2.1-4_ppc64el.deb ... 130s Unpacking libutempter0:ppc64el (1.2.1-4) over (1.2.1-3build1) ... 130s Setting up libnewt0.52:ppc64el (0.52.24-2ubuntu4) ... 130s Setting up libutempter0:ppc64el (1.2.1-4) ... 130s Setting up whiptail (0.52.24-2ubuntu4) ... 130s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 130s Setting up libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) ... 130s Setting up python3.13-gdbm (3.13.0-2) ... 130s Setting up libpython3-stdlib:ppc64el (3.12.7-1) ... 130s Setting up bpftrace (0.21.2-2ubuntu2) ... 130s Setting up python3 (3.12.7-1) ... 130s Setting up python3-newt:ppc64el (0.52.24-2ubuntu4) ... 130s Setting up libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) ... 130s Setting up python3-bpfcc (0.30.0+ds-1ubuntu5) ... 131s Setting up python3-gdbm:ppc64el (3.12.7-1) ... 131s Setting up bpfcc-tools (0.30.0+ds-1ubuntu5) ... 131s Processing triggers for man-db (2.12.1-3) ... 132s Processing triggers for libc-bin (2.40-1ubuntu3) ... 132s Reading package lists... 133s Building dependency tree... 133s Reading state information... 133s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 134s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 134s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 134s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 134s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 135s Reading package lists... 135s Reading package lists... 136s Building dependency tree... 136s Reading state information... 136s Calculating upgrade... 136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 136s Reading package lists... 137s Building dependency tree... 137s Reading state information... 137s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 140s autopkgtest [19:23:29]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 140s autopkgtest [19:23:29]: @@@@@@@@@@@@@@@@@@@@ apt-source picopore 143s Get:1 http://ftpmaster.internal/ubuntu plucky/universe picopore 1.2.0-3 (dsc) [2191 B] 143s Get:2 http://ftpmaster.internal/ubuntu plucky/universe picopore 1.2.0-3 (tar) [6276 kB] 143s Get:3 http://ftpmaster.internal/ubuntu plucky/universe picopore 1.2.0-3 (diff) [5332 B] 144s gpgv: Signature made Fri Dec 15 20:40:34 2023 UTC 144s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 144s gpgv: issuer "tille@debian.org" 144s gpgv: Can't check signature: No public key 144s dpkg-source: warning: cannot verify inline signature for ./picopore_1.2.0-3.dsc: no acceptable signature found 144s autopkgtest [19:23:33]: testing package picopore version 1.2.0-3 144s autopkgtest [19:23:33]: build not needed 145s autopkgtest [19:23:34]: test run-unit-test: preparing testbed 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s Starting pkgProblemResolver with broken count: 0 147s Starting 2 pkgProblemResolver with broken count: 0 147s Done 148s The following additional packages will be installed: 148s hdf5-tools libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 148s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblzf1 148s libpython3.13-minimal libpython3.13-stdlib libsz2 picopore python3-all 148s python3-h5py python3-h5py-serial python3-numpy python3-picopore 148s python3-watchdog python3.13 python3.13-minimal 148s Suggested packages: 148s python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-pytest 148s python3.13-venv python3.13-doc binfmt-support 148s Recommended packages: 148s javascript-common 148s The following NEW packages will be installed: 148s autopkgtest-satdep hdf5-tools libaec0 libblas3 libgfortran5 libhdf5-103-1t64 148s libhdf5-hl-100t64 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 148s liblzf1 libpython3.13-minimal libpython3.13-stdlib libsz2 picopore 148s python3-all python3-h5py python3-h5py-serial python3-numpy python3-picopore 148s python3-watchdog python3.13 python3.13-minimal 148s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 148s Need to get 17.9 MB/17.9 MB of archives. 148s After this operation, 77.2 MB of additional disk space will be used. 148s Get:1 /tmp/autopkgtest.8zJStI/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 148s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-minimal ppc64el 3.13.0-2 [881 kB] 148s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-minimal ppc64el 3.13.0-2 [2302 kB] 148s Get:4 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 148s Get:5 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 148s Get:6 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4ubuntu3 [1387 kB] 148s Get:7 http://ftpmaster.internal/ubuntu plucky/universe ppc64el hdf5-tools ppc64el 1.10.10+repack-4ubuntu3 [355 kB] 148s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-3build2 [222 kB] 148s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-8ubuntu1 [571 kB] 148s Get:10 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4ubuntu3 [71.2 kB] 148s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 148s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 148s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-sphinxdoc all 7.4.7-4 [158 kB] 148s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-3build2 [2806 kB] 149s Get:15 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 149s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-stdlib ppc64el 3.13.0-2 [2148 kB] 149s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11build1 [4434 kB] 149s Get:18 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py-serial ppc64el 3.11.0-5ubuntu1 [1159 kB] 149s Get:19 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py all 3.11.0-5ubuntu1 [7974 B] 149s Get:20 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-watchdog all 5.0.0-1 [125 kB] 149s Get:21 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-picopore all 1.2.0-3 [15.6 kB] 149s Get:22 http://ftpmaster.internal/ubuntu plucky/universe ppc64el picopore all 1.2.0-3 [9878 B] 149s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13 ppc64el 3.13.0-2 [719 kB] 149s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-all ppc64el 3.12.7-1 [888 B] 149s Fetched 17.9 MB in 1s (15.9 MB/s) 149s Selecting previously unselected package libpython3.13-minimal:ppc64el. 149s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73775 files and directories currently installed.) 149s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_ppc64el.deb ... 149s Unpacking libpython3.13-minimal:ppc64el (3.13.0-2) ... 149s Selecting previously unselected package python3.13-minimal. 149s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_ppc64el.deb ... 149s Unpacking python3.13-minimal (3.13.0-2) ... 150s Selecting previously unselected package libaec0:ppc64el. 150s Preparing to unpack .../02-libaec0_1.1.3-1_ppc64el.deb ... 150s Unpacking libaec0:ppc64el (1.1.3-1) ... 150s Selecting previously unselected package libsz2:ppc64el. 150s Preparing to unpack .../03-libsz2_1.1.3-1_ppc64el.deb ... 150s Unpacking libsz2:ppc64el (1.1.3-1) ... 150s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 150s Preparing to unpack .../04-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 150s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 150s Selecting previously unselected package hdf5-tools. 150s Preparing to unpack .../05-hdf5-tools_1.10.10+repack-4ubuntu3_ppc64el.deb ... 150s Unpacking hdf5-tools (1.10.10+repack-4ubuntu3) ... 150s Selecting previously unselected package libblas3:ppc64el. 150s Preparing to unpack .../06-libblas3_3.12.0-3build2_ppc64el.deb ... 150s Unpacking libblas3:ppc64el (3.12.0-3build2) ... 150s Selecting previously unselected package libgfortran5:ppc64el. 150s Preparing to unpack .../07-libgfortran5_14.2.0-8ubuntu1_ppc64el.deb ... 150s Unpacking libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 150s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 150s Preparing to unpack .../08-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 150s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 150s Selecting previously unselected package libjs-jquery. 150s Preparing to unpack .../09-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 150s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 150s Selecting previously unselected package libjs-underscore. 150s Preparing to unpack .../10-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 150s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 150s Selecting previously unselected package libjs-sphinxdoc. 150s Preparing to unpack .../11-libjs-sphinxdoc_7.4.7-4_all.deb ... 150s Unpacking libjs-sphinxdoc (7.4.7-4) ... 150s Selecting previously unselected package liblapack3:ppc64el. 150s Preparing to unpack .../12-liblapack3_3.12.0-3build2_ppc64el.deb ... 150s Unpacking liblapack3:ppc64el (3.12.0-3build2) ... 150s Selecting previously unselected package liblzf1:ppc64el. 150s Preparing to unpack .../13-liblzf1_3.6-4_ppc64el.deb ... 150s Unpacking liblzf1:ppc64el (3.6-4) ... 150s Selecting previously unselected package libpython3.13-stdlib:ppc64el. 150s Preparing to unpack .../14-libpython3.13-stdlib_3.13.0-2_ppc64el.deb ... 150s Unpacking libpython3.13-stdlib:ppc64el (3.13.0-2) ... 150s Selecting previously unselected package python3-numpy. 150s Preparing to unpack .../15-python3-numpy_1%3a1.26.4+ds-11build1_ppc64el.deb ... 150s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 151s Selecting previously unselected package python3-h5py-serial. 151s Preparing to unpack .../16-python3-h5py-serial_3.11.0-5ubuntu1_ppc64el.deb ... 151s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 151s Selecting previously unselected package python3-h5py. 151s Preparing to unpack .../17-python3-h5py_3.11.0-5ubuntu1_all.deb ... 151s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 151s Selecting previously unselected package python3-watchdog. 151s Preparing to unpack .../18-python3-watchdog_5.0.0-1_all.deb ... 151s Unpacking python3-watchdog (5.0.0-1) ... 151s Selecting previously unselected package python3-picopore. 151s Preparing to unpack .../19-python3-picopore_1.2.0-3_all.deb ... 151s Unpacking python3-picopore (1.2.0-3) ... 151s Selecting previously unselected package picopore. 151s Preparing to unpack .../20-picopore_1.2.0-3_all.deb ... 151s Unpacking picopore (1.2.0-3) ... 151s Selecting previously unselected package python3.13. 151s Preparing to unpack .../21-python3.13_3.13.0-2_ppc64el.deb ... 151s Unpacking python3.13 (3.13.0-2) ... 151s Selecting previously unselected package python3-all. 151s Preparing to unpack .../22-python3-all_3.12.7-1_ppc64el.deb ... 151s Unpacking python3-all (3.12.7-1) ... 151s Selecting previously unselected package autopkgtest-satdep. 151s Preparing to unpack .../23-1-autopkgtest-satdep.deb ... 151s Unpacking autopkgtest-satdep (0) ... 151s Setting up libaec0:ppc64el (1.1.3-1) ... 151s Setting up libpython3.13-minimal:ppc64el (3.13.0-2) ... 151s Setting up libblas3:ppc64el (3.12.0-3build2) ... 151s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 151s Setting up liblzf1:ppc64el (3.6-4) ... 151s Setting up libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 151s Setting up python3.13-minimal (3.13.0-2) ... 153s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 153s Setting up libpython3.13-stdlib:ppc64el (3.13.0-2) ... 153s Setting up libsz2:ppc64el (1.1.3-1) ... 153s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 153s Setting up liblapack3:ppc64el (3.12.0-3build2) ... 153s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 153s Setting up python3.13 (3.13.0-2) ... 154s Setting up python3-all (3.12.7-1) ... 154s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 159s Setting up libjs-sphinxdoc (7.4.7-4) ... 159s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 159s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 159s Setting up python3-watchdog (5.0.0-1) ... 160s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 160s Setting up hdf5-tools (1.10.10+repack-4ubuntu3) ... 160s Setting up python3-h5py (3.11.0-5ubuntu1) ... 161s Setting up python3-picopore (1.2.0-3) ... 161s Setting up picopore (1.2.0-3) ... 161s Setting up autopkgtest-satdep (0) ... 161s Processing triggers for systemd (256.5-2ubuntu4) ... 161s Processing triggers for man-db (2.12.1-3) ... 161s Processing triggers for libc-bin (2.40-1ubuntu3) ... 165s (Reading database ... 75770 files and directories currently installed.) 165s Removing autopkgtest-satdep (0) ... 165s autopkgtest [19:23:54]: test run-unit-test: [----------------------- 166s Performing lossless compression on 1 files... 166s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 166s .Complete. 166s Original size: 673522 166s Compressed size: 673522 166s Performing lossless decompression on 1 files... 166s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 166s .Complete. 166s Compressed size: 673522 166s Reverted size: 1347044 166s Checking equivalence of /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/albacore_1d_original.fast5 (file 1) and /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 (file 2)... 166s Complete with 0 errors. 167s Performing lossless compression on 1 files... 167s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 167s .Complete. 167s Original size: 673522 167s Compressed size: 673522 167s Performing deep lossless compression on 1 files... 167s .Complete. 167s Original size: 673522 167s Compressed size: 629000 167s Performing deep lossless decompression on 1 files... 167s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 167s .Complete. 167s Compressed size: 629000 167s Reverted size: 1276128 167s Checking equivalence of /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/albacore_1d_original.fast5 (file 1) and /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.albacore_1d_original.fast5 (file 2)... 168s Complete with 0 errors. 168s Performing deep lossless compression on 1 files... 168s .Complete. 168s Original size: 673522 168s Compressed size: 629000 168s Performing raw compression with FASTQ and summary on 1 files... 168s .Complete. 168s Original size: 673522 168s Compressed size: 119182 168s Performing raw compression with summary and no FASTQ on 1 files... 168s .Complete. 168s Original size: 673522 168s Compressed size: 103635 169s Performing raw compression with FASTQ and no summary on 1 files... 169s .Complete. 169s Original size: 673522 169s Compressed size: 116766 169s Performing raw compression with no summary and no FASTQ on 1 files... 169s .Complete. 169s Original size: 673522 169s Compressed size: 98915 170s Performing raw compression with manual keyword Analyses on 1 files... 170s .Complete. 170s Original size: 673522 170s Compressed size: 98915 170s Performing lossless compression on 1 files... 170s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 170s .Complete. 170s Original size: 2003942 170s Compressed size: 2003942 170s Performing lossless decompression on 1 files... 170s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 170s .Complete. 170s Compressed size: 2003942 170s Reverted size: 4007884 170s Checking equivalence of /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/metrichor_2d_original.fast5 (file 1) and /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 (file 2)... 171s Complete with 0 errors. 171s Performing lossless compression on 1 files... 171s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 171s .Complete. 171s Original size: 2003942 171s Compressed size: 2003942 171s Performing deep lossless compression on 1 files... 172s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 172s .Complete. 172s Original size: 2003942 172s Compressed size: 2003942 172s Performing deep lossless decompression on 1 files... 172s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 172s .Complete. 172s Compressed size: 2003942 172s Reverted size: 4007884 172s Checking equivalence of /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/metrichor_2d_original.fast5 (file 1) and /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 (file 2)... 172s Complete with 0 errors. 172s Performing deep lossless compression on 1 files... 172s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/sample_data/picopore.test.metrichor_2d_original.fast5 172s .Complete. 172s Original size: 2003942 172s Compressed size: 2003942 172s Performing raw compression with FASTQ and summary on 1 files... 172s .Complete. 172s Original size: 2003942 172s Compressed size: 270517 173s Performing raw compression with summary and no FASTQ on 1 files... 173s .Complete. 173s Original size: 2003942 173s Compressed size: 232978 173s Performing raw compression with FASTQ and no summary on 1 files... 173s .Complete. 173s Original size: 2003942 173s Compressed size: 261197 173s Performing raw compression with no summary and no FASTQ on 1 files... 174s .Complete. 174s Original size: 2003942 174s Compressed size: 219602 174s Performing raw compression with manual keyword Analyses on 1 files... 174s .Complete. 174s Original size: 2003942 174s Compressed size: 219602 174s Performing real time lossless compression... 174s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 174s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 184s ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime/albacore_1d_original.fast5 194s .ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime/metrichor_2d_original.fast5 204s . 204s Exiting Picopore. 204s Processing in-progress files. Press Ctrl-C again to abort. 204s Complete. 204s Original size: 2677464 204s Compressed size: 2677464 205s Performing real time deep lossless compression... 205s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 205s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 224s .ERROR: 'Dataset' object has no attribute 'value' on file /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime/metrichor_2d_original.fast5 234s . 234s Exiting Picopore. 234s Processing in-progress files. Press Ctrl-C again to abort. 234s Complete. 234s Original size: 2677464 234s Compressed size: 2632942 235s Performing real time raw compression with FASTQ and summary... 235s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 235s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 265s .. 265s Exiting Picopore. 265s Processing in-progress files. Press Ctrl-C again to abort. 265s Complete. 265s Original size: 1459954 265s Compressed size: 389699 265s Performing real time raw compression with summary and no FASTQ... 265s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 265s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 295s .. 295s Exiting Picopore. 295s Processing in-progress files. Press Ctrl-C again to abort. 295s Complete. 295s Original size: 2677464 295s Compressed size: 336613 296s Performing real time raw compression with FASTQ and no summary... 296s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 296s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 326s .. 326s Exiting Picopore. 326s Processing in-progress files. Press Ctrl-C again to abort. 326s Complete. 326s Original size: 1197810 326s Compressed size: 377963 326s Performing real time raw compression with no summary and no FASTQ... 326s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 326s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 356s .. 356s Exiting Picopore. 356s Processing in-progress files. Press Ctrl-C again to abort. 356s Complete. 356s Original size: 2677464 356s Compressed size: 318517 356s Performing real time raw compression with manual keyword Analyses... 356s Monitoring /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime in real time. Press Ctrl+C to exit. 356s No files found under /tmp/autopkgtest.8zJStI/autopkgtest_tmp/realtime 386s .. 386s Exiting Picopore. 386s Processing in-progress files. Press Ctrl-C again to abort. 386s Complete. 386s Original size: 2677464 386s Compressed size: 318517 386s python3 -m picopore -y --print-every 1 --test --mode lossless sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode lossless sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --test --mode deep-lossless sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode deep-lossless sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --fastq --summary sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --summary --no-fastq sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --fastq --no-summary sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --no-fastq --no-summary sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --manual Analyses sample_data/albacore_1d_original.fast5 386s python3 -m picopore -y --print-every 1 --test --mode lossless sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode lossless sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --test --mode deep-lossless sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode deep-lossless sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --fastq --summary sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --summary --no-fastq sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --fastq --no-summary sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --no-fastq --no-summary sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --print-every 1 --prefix picopore.test --mode raw --manual Analyses sample_data/metrichor_2d_original.fast5 386s python3 -m picopore -y --realtime --print-every 1 --mode lossless realtime 386s python3 -m picopore -y --realtime --print-every 1 --mode deep-lossless realtime 386s python3 -m picopore -y --realtime --print-every 1 --fastq --summary --mode raw realtime 386s python3 -m picopore -y --realtime --print-every 1 --summary --no-fastq --mode raw realtime 386s python3 -m picopore -y --realtime --print-every 1 --fastq --no-summary --mode raw realtime 386s python3 -m picopore -y --realtime --print-every 1 --no-fastq --no-summary --mode raw realtime 386s python3 -m picopore -y --realtime --print-every 1 --manual Analyses --mode raw realtime 386s PASS 387s autopkgtest [19:27:36]: test run-unit-test: -----------------------] 387s autopkgtest [19:27:36]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 387s run-unit-test PASS 388s autopkgtest [19:27:37]: test autodep8-python3: preparing testbed 526s autopkgtest [19:29:55]: testbed dpkg architecture: ppc64el 526s autopkgtest [19:29:55]: testbed apt version: 2.9.8 526s autopkgtest [19:29:55]: @@@@@@@@@@@@@@@@@@@@ test bed setup 527s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 527s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 527s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [958 kB] 528s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 528s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [98.3 kB] 528s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [108 kB] 528s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [673 kB] 528s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [20.8 kB] 528s Fetched 1956 kB in 1s (1845 kB/s) 528s Reading package lists... 530s Reading package lists... 531s Building dependency tree... 531s Reading state information... 531s Calculating upgrade... 531s The following NEW packages will be installed: 531s python3.13-gdbm 531s The following packages will be upgraded: 531s bpfcc-tools bpftrace libbpfcc libgnutls30t64 libjson-glib-1.0-0 531s libjson-glib-1.0-common libnewt0.52 libpython3-stdlib libutempter0 python3 531s python3-bpfcc python3-gdbm python3-minimal python3-newt whiptail 531s 15 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 531s Need to get 4700 kB of archives. 531s After this operation, 215 kB of additional disk space will be used. 531s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-minimal ppc64el 3.12.7-1 [27.4 kB] 531s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3 ppc64el 3.12.7-1 [24.0 kB] 531s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-stdlib ppc64el 3.12.7-1 [10.0 kB] 531s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgnutls30t64 ppc64el 3.8.8-2ubuntu1 [1072 kB] 532s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-newt ppc64el 0.52.24-2ubuntu4 [21.8 kB] 532s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el libnewt0.52 ppc64el 0.52.24-2ubuntu4 [62.1 kB] 532s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el whiptail ppc64el 0.52.24-2ubuntu4 [19.5 kB] 532s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-gdbm ppc64el 3.13.0-2 [31.5 kB] 532s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-gdbm ppc64el 3.12.7-1 [8640 B] 532s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libbpfcc ppc64el 0.30.0+ds-1ubuntu5 [696 kB] 532s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-bpfcc all 0.30.0+ds-1ubuntu5 [40.4 kB] 532s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpfcc-tools all 0.30.0+ds-1ubuntu5 [697 kB] 532s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el bpftrace ppc64el 0.21.2-2ubuntu2 [1898 kB] 532s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 532s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-0 ppc64el 1.10.0+ds-3 [76.0 kB] 532s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libutempter0 ppc64el 1.2.1-4 [9850 B] 532s Fetched 4700 kB in 1s (5844 kB/s) 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 533s Preparing to unpack .../python3-minimal_3.12.7-1_ppc64el.deb ... 533s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 533s Setting up python3-minimal (3.12.7-1) ... 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 533s Preparing to unpack .../python3_3.12.7-1_ppc64el.deb ... 533s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 533s Preparing to unpack .../libpython3-stdlib_3.12.7-1_ppc64el.deb ... 533s Unpacking libpython3-stdlib:ppc64el (3.12.7-1) over (3.12.6-0ubuntu1) ... 533s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_ppc64el.deb ... 533s Unpacking libgnutls30t64:ppc64el (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 533s Setting up libgnutls30t64:ppc64el (3.8.8-2ubuntu1) ... 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 533s Preparing to unpack .../00-python3-newt_0.52.24-2ubuntu4_ppc64el.deb ... 533s Unpacking python3-newt:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 533s Preparing to unpack .../01-libnewt0.52_0.52.24-2ubuntu4_ppc64el.deb ... 533s Unpacking libnewt0.52:ppc64el (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 533s Preparing to unpack .../02-whiptail_0.52.24-2ubuntu4_ppc64el.deb ... 533s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 533s Selecting previously unselected package python3.13-gdbm. 533s Preparing to unpack .../03-python3.13-gdbm_3.13.0-2_ppc64el.deb ... 533s Unpacking python3.13-gdbm (3.13.0-2) ... 533s Preparing to unpack .../04-python3-gdbm_3.12.7-1_ppc64el.deb ... 533s Unpacking python3-gdbm:ppc64el (3.12.7-1) over (3.12.6-1ubuntu1) ... 533s Preparing to unpack .../05-libbpfcc_0.30.0+ds-1ubuntu5_ppc64el.deb ... 533s Unpacking libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 533s Preparing to unpack .../06-python3-bpfcc_0.30.0+ds-1ubuntu5_all.deb ... 533s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 533s Preparing to unpack .../07-bpfcc-tools_0.30.0+ds-1ubuntu5_all.deb ... 533s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu5) over (0.30.0+ds-1ubuntu4) ... 534s Preparing to unpack .../08-bpftrace_0.21.2-2ubuntu2_ppc64el.deb ... 534s Unpacking bpftrace (0.21.2-2ubuntu2) over (0.21.2-2) ... 534s Preparing to unpack .../09-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 534s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 534s Preparing to unpack .../10-libjson-glib-1.0-0_1.10.0+ds-3_ppc64el.deb ... 534s Unpacking libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) over (1.10.0+ds-2) ... 534s Preparing to unpack .../11-libutempter0_1.2.1-4_ppc64el.deb ... 534s Unpacking libutempter0:ppc64el (1.2.1-4) over (1.2.1-3build1) ... 534s Setting up libnewt0.52:ppc64el (0.52.24-2ubuntu4) ... 534s Setting up libutempter0:ppc64el (1.2.1-4) ... 534s Setting up whiptail (0.52.24-2ubuntu4) ... 534s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 534s Setting up libbpfcc:ppc64el (0.30.0+ds-1ubuntu5) ... 534s Setting up python3.13-gdbm (3.13.0-2) ... 534s Setting up libpython3-stdlib:ppc64el (3.12.7-1) ... 534s Setting up bpftrace (0.21.2-2ubuntu2) ... 534s Setting up python3 (3.12.7-1) ... 534s Setting up python3-newt:ppc64el (0.52.24-2ubuntu4) ... 534s Setting up libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) ... 534s Setting up python3-bpfcc (0.30.0+ds-1ubuntu5) ... 534s Setting up python3-gdbm:ppc64el (3.12.7-1) ... 534s Setting up bpfcc-tools (0.30.0+ds-1ubuntu5) ... 534s Processing triggers for man-db (2.12.1-3) ... 536s Processing triggers for libc-bin (2.40-1ubuntu3) ... 536s Reading package lists... 536s Building dependency tree... 536s Reading state information... 537s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 537s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 537s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 537s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 537s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 538s Reading package lists... 538s Reading package lists... 539s Building dependency tree... 539s Reading state information... 539s Calculating upgrade... 539s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 539s Reading package lists... 539s Building dependency tree... 539s Reading state information... 540s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 544s Reading package lists... 544s Building dependency tree... 544s Reading state information... 544s Starting pkgProblemResolver with broken count: 0 544s Starting 2 pkgProblemResolver with broken count: 0 544s Done 544s The following additional packages will be installed: 544s hdf5-tools libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 544s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblzf1 544s libpython3.13-minimal libpython3.13-stdlib libsz2 python3-all python3-h5py 544s python3-h5py-serial python3-numpy python3-picopore python3-watchdog 544s python3.13 python3.13-minimal 544s Suggested packages: 544s python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-pytest 544s python3.13-venv python3.13-doc binfmt-support 544s Recommended packages: 544s javascript-common 544s The following NEW packages will be installed: 544s autopkgtest-satdep hdf5-tools libaec0 libblas3 libgfortran5 libhdf5-103-1t64 544s libhdf5-hl-100t64 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 544s liblzf1 libpython3.13-minimal libpython3.13-stdlib libsz2 python3-all 544s python3-h5py python3-h5py-serial python3-numpy python3-picopore 544s python3-watchdog python3.13 python3.13-minimal 544s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 544s Need to get 17.9 MB/17.9 MB of archives. 544s After this operation, 77.2 MB of additional disk space will be used. 544s Get:1 /tmp/autopkgtest.8zJStI/2-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 545s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-minimal ppc64el 3.13.0-2 [881 kB] 545s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-minimal ppc64el 3.13.0-2 [2302 kB] 545s Get:4 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 545s Get:5 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 545s Get:6 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-103-1t64 ppc64el 1.10.10+repack-4ubuntu3 [1387 kB] 545s Get:7 http://ftpmaster.internal/ubuntu plucky/universe ppc64el hdf5-tools ppc64el 1.10.10+repack-4ubuntu3 [355 kB] 545s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-3build2 [222 kB] 545s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-8ubuntu1 [571 kB] 545s Get:10 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhdf5-hl-100t64 ppc64el 1.10.10+repack-4ubuntu3 [71.2 kB] 545s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 545s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 545s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-sphinxdoc all 7.4.7-4 [158 kB] 545s Get:14 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-3build2 [2806 kB] 545s Get:15 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblzf1 ppc64el 3.6-4 [7920 B] 545s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libpython3.13-stdlib ppc64el 3.13.0-2 [2148 kB] 545s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13 ppc64el 3.13.0-2 [719 kB] 546s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-all ppc64el 3.12.7-1 [888 B] 546s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11build1 [4434 kB] 546s Get:20 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py-serial ppc64el 3.11.0-5ubuntu1 [1159 kB] 546s Get:21 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-h5py all 3.11.0-5ubuntu1 [7974 B] 546s Get:22 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-watchdog all 5.0.0-1 [125 kB] 546s Get:23 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-picopore all 1.2.0-3 [15.6 kB] 546s Fetched 17.9 MB in 1s (12.4 MB/s) 546s Selecting previously unselected package libpython3.13-minimal:ppc64el. 546s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73775 files and directories currently installed.) 546s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_ppc64el.deb ... 546s Unpacking libpython3.13-minimal:ppc64el (3.13.0-2) ... 546s Selecting previously unselected package python3.13-minimal. 546s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_ppc64el.deb ... 546s Unpacking python3.13-minimal (3.13.0-2) ... 546s Selecting previously unselected package libaec0:ppc64el. 546s Preparing to unpack .../02-libaec0_1.1.3-1_ppc64el.deb ... 546s Unpacking libaec0:ppc64el (1.1.3-1) ... 547s Selecting previously unselected package libsz2:ppc64el. 547s Preparing to unpack .../03-libsz2_1.1.3-1_ppc64el.deb ... 547s Unpacking libsz2:ppc64el (1.1.3-1) ... 547s Selecting previously unselected package libhdf5-103-1t64:ppc64el. 547s Preparing to unpack .../04-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 547s Unpacking libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 547s Selecting previously unselected package hdf5-tools. 547s Preparing to unpack .../05-hdf5-tools_1.10.10+repack-4ubuntu3_ppc64el.deb ... 547s Unpacking hdf5-tools (1.10.10+repack-4ubuntu3) ... 547s Selecting previously unselected package libblas3:ppc64el. 547s Preparing to unpack .../06-libblas3_3.12.0-3build2_ppc64el.deb ... 547s Unpacking libblas3:ppc64el (3.12.0-3build2) ... 547s Selecting previously unselected package libgfortran5:ppc64el. 547s Preparing to unpack .../07-libgfortran5_14.2.0-8ubuntu1_ppc64el.deb ... 547s Unpacking libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 547s Selecting previously unselected package libhdf5-hl-100t64:ppc64el. 547s Preparing to unpack .../08-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_ppc64el.deb ... 547s Unpacking libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 547s Selecting previously unselected package libjs-jquery. 547s Preparing to unpack .../09-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 547s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 547s Selecting previously unselected package libjs-underscore. 547s Preparing to unpack .../10-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 547s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 547s Selecting previously unselected package libjs-sphinxdoc. 547s Preparing to unpack .../11-libjs-sphinxdoc_7.4.7-4_all.deb ... 547s Unpacking libjs-sphinxdoc (7.4.7-4) ... 547s Selecting previously unselected package liblapack3:ppc64el. 547s Preparing to unpack .../12-liblapack3_3.12.0-3build2_ppc64el.deb ... 547s Unpacking liblapack3:ppc64el (3.12.0-3build2) ... 547s Selecting previously unselected package liblzf1:ppc64el. 547s Preparing to unpack .../13-liblzf1_3.6-4_ppc64el.deb ... 547s Unpacking liblzf1:ppc64el (3.6-4) ... 547s Selecting previously unselected package libpython3.13-stdlib:ppc64el. 547s Preparing to unpack .../14-libpython3.13-stdlib_3.13.0-2_ppc64el.deb ... 547s Unpacking libpython3.13-stdlib:ppc64el (3.13.0-2) ... 547s Selecting previously unselected package python3.13. 547s Preparing to unpack .../15-python3.13_3.13.0-2_ppc64el.deb ... 547s Unpacking python3.13 (3.13.0-2) ... 547s Selecting previously unselected package python3-all. 547s Preparing to unpack .../16-python3-all_3.12.7-1_ppc64el.deb ... 547s Unpacking python3-all (3.12.7-1) ... 547s Selecting previously unselected package python3-numpy. 547s Preparing to unpack .../17-python3-numpy_1%3a1.26.4+ds-11build1_ppc64el.deb ... 547s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 548s Selecting previously unselected package python3-h5py-serial. 548s Preparing to unpack .../18-python3-h5py-serial_3.11.0-5ubuntu1_ppc64el.deb ... 548s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 548s Selecting previously unselected package python3-h5py. 548s Preparing to unpack .../19-python3-h5py_3.11.0-5ubuntu1_all.deb ... 548s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 548s Selecting previously unselected package python3-watchdog. 548s Preparing to unpack .../20-python3-watchdog_5.0.0-1_all.deb ... 548s Unpacking python3-watchdog (5.0.0-1) ... 548s Selecting previously unselected package python3-picopore. 548s Preparing to unpack .../21-python3-picopore_1.2.0-3_all.deb ... 548s Unpacking python3-picopore (1.2.0-3) ... 548s Selecting previously unselected package autopkgtest-satdep. 548s Preparing to unpack .../22-2-autopkgtest-satdep.deb ... 548s Unpacking autopkgtest-satdep (0) ... 548s Setting up libaec0:ppc64el (1.1.3-1) ... 548s Setting up libpython3.13-minimal:ppc64el (3.13.0-2) ... 548s Setting up libblas3:ppc64el (3.12.0-3build2) ... 548s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 548s Setting up liblzf1:ppc64el (3.6-4) ... 548s Setting up libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 548s Setting up python3.13-minimal (3.13.0-2) ... 549s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 549s Setting up libpython3.13-stdlib:ppc64el (3.13.0-2) ... 549s Setting up libsz2:ppc64el (1.1.3-1) ... 549s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 549s Setting up liblapack3:ppc64el (3.12.0-3build2) ... 549s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 549s Setting up python3.13 (3.13.0-2) ... 550s Setting up python3-all (3.12.7-1) ... 550s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 555s Setting up libjs-sphinxdoc (7.4.7-4) ... 555s Setting up libhdf5-103-1t64:ppc64el (1.10.10+repack-4ubuntu3) ... 555s Setting up libhdf5-hl-100t64:ppc64el (1.10.10+repack-4ubuntu3) ... 555s Setting up python3-watchdog (5.0.0-1) ... 555s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 556s Setting up hdf5-tools (1.10.10+repack-4ubuntu3) ... 556s Setting up python3-h5py (3.11.0-5ubuntu1) ... 556s Setting up python3-picopore (1.2.0-3) ... 556s Setting up autopkgtest-satdep (0) ... 556s Processing triggers for systemd (256.5-2ubuntu4) ... 556s Processing triggers for man-db (2.12.1-3) ... 557s Processing triggers for libc-bin (2.40-1ubuntu3) ... 560s (Reading database ... 75758 files and directories currently installed.) 560s Removing autopkgtest-satdep (0) ... 562s autopkgtest [19:30:31]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import picopore; print(picopore)" ; done 562s autopkgtest [19:30:31]: test autodep8-python3: [----------------------- 563s Testing with python3.13: 563s Traceback (most recent call last): 563s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 563s from . import multiarray 563s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 563s from . import overrides 563s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 563s from numpy.core._multiarray_umath import ( 563s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 563s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 563s 563s During handling of the above exception, another exception occurred: 563s 563s Traceback (most recent call last): 563s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 563s from numpy.__config__ import show as show_config 563s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 563s from numpy.core._multiarray_umath import ( 563s ...<3 lines>... 563s ) 563s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 563s raise ImportError(msg) 563s ImportError: 563s 563s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 563s 563s Importing the numpy C-extensions failed. This error can happen for 563s many reasons, often due to issues with your setup or how NumPy was 563s installed. 563s 563s We have compiled some common reasons and troubleshooting tips at: 563s 563s https://numpy.org/devdocs/user/troubleshooting-importerror.html 563s 563s Please note and check the following: 563s 563s * The Python version is: Python3.13 from "/usr/bin/python3.13" 563s * The NumPy version is: "1.26.4" 563s 563s and make sure that they are the versions you expect. 563s Please carefully study the documentation linked above for further help. 563s 563s Original error was: No module named 'numpy.core._multiarray_umath' 563s 563s 563s The above exception was the direct cause of the following exception: 563s 563s Traceback (most recent call last): 563s File "", line 1, in 563s import picopore; print(picopore) 563s ^^^^^^^^^^^^^^^ 563s File "/usr/lib/python3/dist-packages/picopore/__init__.py", line 2, in 563s from picopore.util import log 563s File "/usr/lib/python3/dist-packages/picopore/util.py", line 19, in 563s import numpy as np 563s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 563s raise ImportError(msg) from e 563s ImportError: Error importing numpy: you should not try to import numpy from 563s its source directory; please exit the numpy source tree, and relaunch 563s your python interpreter from there. 563s autopkgtest [19:30:32]: test autodep8-python3: -----------------------] 564s autodep8-python3 FAIL non-zero exit status 1 564s autopkgtest [19:30:33]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 564s autopkgtest [19:30:33]: @@@@@@@@@@@@@@@@@@@@ summary 564s run-unit-test PASS 564s autodep8-python3 FAIL non-zero exit status 1 576s virt: nova [W] Using flock in prodstack6-ppc64el 576s virt: flock: timeout while waiting to get lock 576s virt: Creating nova instance adt-plucky-ppc64el-picopore-20241113-192109-juju-7f2275-prod-proposed-migration-environment-2-238f1c5a-6ee8-46c3-abbf-babb498e99fe from image adt/ubuntu-plucky-ppc64el-server-20241113.img (UUID 0c5715b6-5cca-4485-b8bf-b85dfd917a5f)... 576s virt: nova [W] Using flock in prodstack6-ppc64el 576s virt: Creating nova instance adt-plucky-ppc64el-picopore-20241113-192109-juju-7f2275-prod-proposed-migration-environment-2-238f1c5a-6ee8-46c3-abbf-babb498e99fe from image adt/ubuntu-plucky-ppc64el-server-20241113.img (UUID 0c5715b6-5cca-4485-b8bf-b85dfd917a5f)...