0s autopkgtest [15:20:28]: starting date and time: 2024-11-13 15:20:28+0000 0s autopkgtest [15:20:28]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [15:20:28]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.p14776k5/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade pairtools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-17.secgroup --name adt-plucky-ppc64el-pairtools-20241113-152028-juju-7f2275-prod-proposed-migration-environment-15-e0aad644-29d0-45e5-a6b7-4dc5e6c15d58 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 124s autopkgtest [15:22:32]: testbed dpkg architecture: ppc64el 124s autopkgtest [15:22:32]: testbed apt version: 2.9.8 124s autopkgtest [15:22:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 125s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 126s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 126s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.5 kB] 126s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [962 kB] 126s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [105 kB] 126s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [111 kB] 126s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [668 kB] 126s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [20.4 kB] 126s Fetched 1964 kB in 1s (1429 kB/s) 126s Reading package lists... 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 130s Calculating upgrade... 130s The following NEW packages will be installed: 130s python3.13-gdbm 130s The following packages will be upgraded: 130s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libpython3-stdlib 130s libutempter0 python3 python3-gdbm python3-minimal 130s 8 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 130s Need to get 1265 kB of archives. 130s After this operation, 141 kB of additional disk space will be used. 130s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-minimal ppc64el 3.12.7-1 [27.4 kB] 130s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3 ppc64el 3.12.7-1 [24.0 kB] 130s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libpython3-stdlib ppc64el 3.12.7-1 [10.0 kB] 130s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgnutls30t64 ppc64el 3.8.8-2ubuntu1 [1072 kB] 131s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-gdbm ppc64el 3.13.0-2 [31.5 kB] 131s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-gdbm ppc64el 3.12.7-1 [8640 B] 131s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 131s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjson-glib-1.0-0 ppc64el 1.10.0+ds-3 [76.0 kB] 131s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el libutempter0 ppc64el 1.2.1-4 [9850 B] 131s Fetched 1265 kB in 1s (1999 kB/s) 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 132s Preparing to unpack .../python3-minimal_3.12.7-1_ppc64el.deb ... 132s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 132s Setting up python3-minimal (3.12.7-1) ... 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 132s Preparing to unpack .../python3_3.12.7-1_ppc64el.deb ... 132s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 132s Preparing to unpack .../libpython3-stdlib_3.12.7-1_ppc64el.deb ... 132s Unpacking libpython3-stdlib:ppc64el (3.12.7-1) over (3.12.6-0ubuntu1) ... 132s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_ppc64el.deb ... 132s Unpacking libgnutls30t64:ppc64el (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 132s Setting up libgnutls30t64:ppc64el (3.8.8-2ubuntu1) ... 133s Selecting previously unselected package python3.13-gdbm. 133s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73767 files and directories currently installed.) 133s Preparing to unpack .../python3.13-gdbm_3.13.0-2_ppc64el.deb ... 133s Unpacking python3.13-gdbm (3.13.0-2) ... 133s Preparing to unpack .../python3-gdbm_3.12.7-1_ppc64el.deb ... 133s Unpacking python3-gdbm:ppc64el (3.12.7-1) over (3.12.6-1ubuntu1) ... 133s Preparing to unpack .../libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 133s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 133s Preparing to unpack .../libjson-glib-1.0-0_1.10.0+ds-3_ppc64el.deb ... 133s Unpacking libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) over (1.10.0+ds-2) ... 133s Preparing to unpack .../libutempter0_1.2.1-4_ppc64el.deb ... 133s Unpacking libutempter0:ppc64el (1.2.1-4) over (1.2.1-3build1) ... 133s Setting up libutempter0:ppc64el (1.2.1-4) ... 133s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 133s Setting up python3.13-gdbm (3.13.0-2) ... 133s Setting up libpython3-stdlib:ppc64el (3.12.7-1) ... 133s Setting up python3 (3.12.7-1) ... 133s Setting up libjson-glib-1.0-0:ppc64el (1.10.0+ds-3) ... 133s Setting up python3-gdbm:ppc64el (3.12.7-1) ... 133s Processing triggers for man-db (2.12.1-3) ... 135s Processing triggers for libc-bin (2.40-1ubuntu3) ... 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 136s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 136s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 136s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 137s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 138s Reading package lists... 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 139s Calculating upgrade... 139s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s Reading package lists... 139s Building dependency tree... 139s Reading state information... 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s autopkgtest [15:22:51]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 143s autopkgtest [15:22:51]: @@@@@@@@@@@@@@@@@@@@ apt-source pairtools 145s Get:1 http://ftpmaster.internal/ubuntu plucky/universe pairtools 1.0.3-1build1 (dsc) [2381 B] 145s Get:2 http://ftpmaster.internal/ubuntu plucky/universe pairtools 1.0.3-1build1 (tar) [1255 kB] 145s Get:3 http://ftpmaster.internal/ubuntu plucky/universe pairtools 1.0.3-1build1 (diff) [7144 B] 146s gpgv: Signature made Wed Apr 10 17:37:23 2024 UTC 146s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 146s gpgv: Can't check signature: No public key 146s dpkg-source: warning: cannot verify inline signature for ./pairtools_1.0.3-1build1.dsc: no acceptable signature found 146s autopkgtest [15:22:54]: testing package pairtools version 1.0.3-1build1 146s autopkgtest [15:22:54]: build not needed 147s autopkgtest [15:22:55]: test upstream-tests: preparing testbed 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 149s Starting pkgProblemResolver with broken count: 0 149s Starting 2 pkgProblemResolver with broken count: 0 149s Done 149s The following additional packages will be installed: 149s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx libblas3 149s libdeflate0 libfontconfig1 libgfortran5 libgomp1 libgraphite2-3 149s libharfbuzz0b libhts3t64 libhtscodecs2 libimagequant0 libjbig0 149s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 149s liblcms2-2 liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 149s libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 149s libxrender1 libxslt1.1 libxss1 python-matplotlib-data python3-appdirs 149s python3-bioframe python3-brotli python3-click python3-colorama 149s python3-contourpy python3-cycler python3-dateutil python3-decorator 149s python3-fonttools python3-fs python3-iniconfig python3-kiwisolver 149s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-numpy 149s python3-packaging python3-pairtools python3-pandas python3-pandas-lib 149s python3-pil python3-pil.imagetk python3-pluggy python3-pysam python3-pytest 149s python3-scipy python3-six python3-sympy python3-tk python3-tz 149s python3-ufolib2 python3-unicodedata2 python3.12-tk python3.13-tk 149s tk8.6-blt2.5 unicode-data x11-common 149s Suggested packages: 149s blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc 149s python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript 149s gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc 149s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 149s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 149s python3-gmpy2 gcc gfortran python-numpy-doc python3-dev 149s python3-pairtools-examples python-pandas-doc python3-statsmodels 149s python-pil-doc python-scipy-doc texlive-fonts-extra python-sympy-doc tix 149s python3-tk-dbg 149s Recommended packages: 149s javascript-common python3-bs4 python3-cssselect python3-html5lib 149s python3-bottleneck python3-numexpr python3-odf python3-openpyxl 149s python3-tables python3-olefile g++ | c++-compiler isympy-common 149s The following NEW packages will be installed: 149s autopkgtest-satdep blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 149s fonts-lyx libblas3 libdeflate0 libfontconfig1 libgfortran5 libgomp1 149s libgraphite2-3 libharfbuzz0b libhts3t64 libhtscodecs2 libimagequant0 149s libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui liblapack3 149s liblbfgsb0 liblcms2-2 liblerc4 libopenjp2-7 libqhull-r8.0 libraqm0 149s libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 149s libxft2 libxrender1 libxslt1.1 libxss1 python-matplotlib-data 149s python3-appdirs python3-bioframe python3-brotli python3-click 149s python3-colorama python3-contourpy python3-cycler python3-dateutil 149s python3-decorator python3-fonttools python3-fs python3-iniconfig 149s python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib 149s python3-mpmath python3-numpy python3-packaging python3-pairtools 149s python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk 149s python3-pluggy python3-pysam python3-pytest python3-scipy python3-six 149s python3-sympy python3-tk python3-tz python3-ufolib2 python3-unicodedata2 149s python3.12-tk python3.13-tk tk8.6-blt2.5 unicode-data x11-common 149s 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. 149s Need to get 74.0 MB/74.0 MB of archives. 149s After this operation, 355 MB of additional disk space will be used. 149s Get:1 /tmp/autopkgtest.mrt1ZB/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [720 B] 149s Get:2 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtcl8.6 ppc64el 8.6.15+dfsg-2 [1201 kB] 150s Get:3 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 150s Get:4 http://ftpmaster.internal/ubuntu plucky/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 150s Get:5 http://ftpmaster.internal/ubuntu plucky/main ppc64el fontconfig-config ppc64el 2.15.0-1.1ubuntu2 [37.4 kB] 150s Get:6 http://ftpmaster.internal/ubuntu plucky/main ppc64el libfontconfig1 ppc64el 2.15.0-1.1ubuntu2 [190 kB] 150s Get:7 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 150s Get:8 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 150s Get:9 http://ftpmaster.internal/ubuntu plucky/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB] 150s Get:10 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 150s Get:11 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtk8.6 ppc64el 8.6.15-1 [942 kB] 150s Get:12 http://ftpmaster.internal/ubuntu plucky/main ppc64el tk8.6-blt2.5 ppc64el 2.5.3+dfsg-7build1 [784 kB] 150s Get:13 http://ftpmaster.internal/ubuntu plucky/main ppc64el blt ppc64el 2.5.3+dfsg-7build1 [4840 B] 150s Get:14 http://ftpmaster.internal/ubuntu plucky/universe ppc64el fonts-lyx all 2.4.2.1-1 [171 kB] 150s Get:15 http://ftpmaster.internal/ubuntu plucky/main ppc64el libblas3 ppc64el 3.12.0-3build2 [222 kB] 150s Get:16 http://ftpmaster.internal/ubuntu plucky/main ppc64el libdeflate0 ppc64el 1.22-1 [63.3 kB] 150s Get:17 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgfortran5 ppc64el 14.2.0-8ubuntu1 [571 kB] 150s Get:18 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-8ubuntu1 [161 kB] 150s Get:19 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB] 150s Get:20 http://ftpmaster.internal/ubuntu plucky/main ppc64el libharfbuzz0b ppc64el 10.0.1-1 [596 kB] 150s Get:21 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhtscodecs2 ppc64el 1.6.1-1 [113 kB] 150s Get:22 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libhts3t64 ppc64el 1.20+ds-1 [567 kB] 151s Get:23 http://ftpmaster.internal/ubuntu plucky/main ppc64el libimagequant0 ppc64el 2.18.0-1build1 [43.2 kB] 151s Get:24 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu2 [219 kB] 151s Get:25 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 151s Get:26 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 151s Get:27 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 151s Get:28 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblapack3 ppc64el 3.12.0-3build2 [2806 kB] 151s Get:29 http://ftpmaster.internal/ubuntu plucky/universe ppc64el liblbfgsb0 ppc64el 3.0+dfsg.4-1build1 [33.0 kB] 151s Get:30 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB] 151s Get:31 http://ftpmaster.internal/ubuntu plucky/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu2 [270 kB] 151s Get:32 http://ftpmaster.internal/ubuntu plucky/universe ppc64el libqhull-r8.0 ppc64el 2020.2-6build1 [225 kB] 151s Get:33 http://ftpmaster.internal/ubuntu plucky/main ppc64el libraqm0 ppc64el 0.10.1-1build1 [19.4 kB] 151s Get:34 http://ftpmaster.internal/ubuntu plucky/main ppc64el libsharpyuv0 ppc64el 1.4.0-0.1 [22.0 kB] 151s Get:35 http://ftpmaster.internal/ubuntu plucky/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 151s Get:36 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebp7 ppc64el 1.4.0-0.1 [309 kB] 151s Get:37 http://ftpmaster.internal/ubuntu plucky/main ppc64el libtiff6 ppc64el 4.5.1+git230720-4ubuntu4 [272 kB] 151s Get:38 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebpdemux2 ppc64el 1.4.0-0.1 [14.1 kB] 151s Get:39 http://ftpmaster.internal/ubuntu plucky/main ppc64el libwebpmux3 ppc64el 1.4.0-0.1 [31.4 kB] 151s Get:40 http://ftpmaster.internal/ubuntu plucky/main ppc64el libxslt1.1 ppc64el 1.1.39-0exp1ubuntu1 [191 kB] 151s Get:41 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python-matplotlib-data all 3.8.3-3 [2928 kB] 151s Get:42 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-appdirs all 1.4.4-4 [10.9 kB] 151s Get:43 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-six all 1.16.0-7 [13.1 kB] 151s Get:44 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-dateutil all 2.9.0-2 [80.3 kB] 151s Get:45 http://ftpmaster.internal/ubuntu plucky/main ppc64el libopenjp2-7 ppc64el 2.5.0-2ubuntu1 [246 kB] 151s Get:46 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-pil ppc64el 10.4.0-1ubuntu1 [581 kB] 151s Get:47 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.12-tk ppc64el 3.12.7-3 [116 kB] 151s Get:48 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3.13-tk ppc64el 3.13.0-2 [107 kB] 151s Get:49 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el python3-tk ppc64el 3.12.7-1 [9752 B] 151s Get:50 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pil.imagetk ppc64el 10.4.0-1ubuntu1 [9810 B] 151s Get:51 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-numpy ppc64el 1:1.26.4+ds-11build1 [4434 kB] 152s Get:52 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-contourpy ppc64el 1.3.0-2 [217 kB] 152s Get:53 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-cycler all 0.12.1-1 [9716 B] 152s Get:54 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-brotli ppc64el 1.1.0-2build2 [413 kB] 152s Get:55 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-decorator all 5.1.1-5 [10.1 kB] 152s Get:56 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-scipy ppc64el 1.13.1-5 [18.3 MB] 153s Get:57 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 153s Get:58 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-mpmath all 1.3.0-1 [425 kB] 153s Get:59 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-sympy all 1.13.3-1 [4228 kB] 153s Get:60 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-tz all 2024.1-2 [31.4 kB] 153s Get:61 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-fs all 2.4.16-4 [91.3 kB] 153s Get:62 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-lxml ppc64el 5.3.0-1 [1354 kB] 153s Get:63 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-lz4 ppc64el 4.0.2+dfsg-1build4 [27.8 kB] 153s Get:64 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-unicodedata2 ppc64el 15.1.0+ds-1build1 [367 kB] 153s Get:65 http://ftpmaster.internal/ubuntu plucky/universe ppc64el unicode-data all 15.1.0-1 [8878 kB] 154s Get:66 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-fonttools ppc64el 4.46.0-1build2 [1473 kB] 154s Get:67 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-kiwisolver ppc64el 1.4.7-2 [59.2 kB] 154s Get:68 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-packaging all 24.1-1 [41.4 kB] 154s Get:69 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-matplotlib ppc64el 3.8.3-3 [4610 kB] 154s Get:70 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas-lib ppc64el 2.2.3+dfsg-5 [4761 kB] 154s Get:71 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pandas all 2.2.3+dfsg-5 [3112 kB] 155s Get:72 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-bioframe all 0.4.1-1 [76.1 kB] 155s Get:73 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-colorama all 0.4.6-4 [32.1 kB] 155s Get:74 http://ftpmaster.internal/ubuntu plucky/main ppc64el python3-click all 8.1.7-2 [79.5 kB] 155s Get:75 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-iniconfig all 1.1.1-2 [6024 B] 155s Get:76 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pysam ppc64el 0.22.1+ds-2 [3818 kB] 155s Get:77 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pairtools ppc64el 1.0.3-1build1 [226 kB] 155s Get:78 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pluggy all 1.5.0-1 [21.0 kB] 155s Get:79 http://ftpmaster.internal/ubuntu plucky/universe ppc64el python3-pytest all 8.3.3-1 [251 kB] 156s Fetched 74.0 MB in 6s (13.0 MB/s) 156s Selecting previously unselected package libtcl8.6:ppc64el. 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 73774 files and directories currently installed.) 156s Preparing to unpack .../00-libtcl8.6_8.6.15+dfsg-2_ppc64el.deb ... 156s Unpacking libtcl8.6:ppc64el (8.6.15+dfsg-2) ... 156s Selecting previously unselected package fonts-dejavu-mono. 156s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 156s Unpacking fonts-dejavu-mono (2.37-8) ... 156s Selecting previously unselected package fonts-dejavu-core. 156s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 156s Unpacking fonts-dejavu-core (2.37-8) ... 156s Selecting previously unselected package fontconfig-config. 156s Preparing to unpack .../03-fontconfig-config_2.15.0-1.1ubuntu2_ppc64el.deb ... 156s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 156s Selecting previously unselected package libfontconfig1:ppc64el. 156s Preparing to unpack .../04-libfontconfig1_2.15.0-1.1ubuntu2_ppc64el.deb ... 156s Unpacking libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ... 156s Selecting previously unselected package libxrender1:ppc64el. 156s Preparing to unpack .../05-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 156s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 156s Selecting previously unselected package libxft2:ppc64el. 156s Preparing to unpack .../06-libxft2_2.3.6-1build1_ppc64el.deb ... 156s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 156s Selecting previously unselected package x11-common. 156s Preparing to unpack .../07-x11-common_1%3a7.7+23ubuntu3_all.deb ... 156s Unpacking x11-common (1:7.7+23ubuntu3) ... 156s Selecting previously unselected package libxss1:ppc64el. 156s Preparing to unpack .../08-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 156s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 156s Selecting previously unselected package libtk8.6:ppc64el. 156s Preparing to unpack .../09-libtk8.6_8.6.15-1_ppc64el.deb ... 156s Unpacking libtk8.6:ppc64el (8.6.15-1) ... 156s Selecting previously unselected package tk8.6-blt2.5. 156s Preparing to unpack .../10-tk8.6-blt2.5_2.5.3+dfsg-7build1_ppc64el.deb ... 156s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 156s Selecting previously unselected package blt. 156s Preparing to unpack .../11-blt_2.5.3+dfsg-7build1_ppc64el.deb ... 156s Unpacking blt (2.5.3+dfsg-7build1) ... 156s Selecting previously unselected package fonts-lyx. 156s Preparing to unpack .../12-fonts-lyx_2.4.2.1-1_all.deb ... 156s Unpacking fonts-lyx (2.4.2.1-1) ... 156s Selecting previously unselected package libblas3:ppc64el. 156s Preparing to unpack .../13-libblas3_3.12.0-3build2_ppc64el.deb ... 156s Unpacking libblas3:ppc64el (3.12.0-3build2) ... 156s Selecting previously unselected package libdeflate0:ppc64el. 156s Preparing to unpack .../14-libdeflate0_1.22-1_ppc64el.deb ... 156s Unpacking libdeflate0:ppc64el (1.22-1) ... 157s Selecting previously unselected package libgfortran5:ppc64el. 157s Preparing to unpack .../15-libgfortran5_14.2.0-8ubuntu1_ppc64el.deb ... 157s Unpacking libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 157s Selecting previously unselected package libgomp1:ppc64el. 157s Preparing to unpack .../16-libgomp1_14.2.0-8ubuntu1_ppc64el.deb ... 157s Unpacking libgomp1:ppc64el (14.2.0-8ubuntu1) ... 157s Selecting previously unselected package libgraphite2-3:ppc64el. 157s Preparing to unpack .../17-libgraphite2-3_1.3.14-2ubuntu1_ppc64el.deb ... 157s Unpacking libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 157s Selecting previously unselected package libharfbuzz0b:ppc64el. 157s Preparing to unpack .../18-libharfbuzz0b_10.0.1-1_ppc64el.deb ... 157s Unpacking libharfbuzz0b:ppc64el (10.0.1-1) ... 157s Selecting previously unselected package libhtscodecs2:ppc64el. 157s Preparing to unpack .../19-libhtscodecs2_1.6.1-1_ppc64el.deb ... 157s Unpacking libhtscodecs2:ppc64el (1.6.1-1) ... 157s Selecting previously unselected package libhts3t64:ppc64el. 157s Preparing to unpack .../20-libhts3t64_1.20+ds-1_ppc64el.deb ... 157s Unpacking libhts3t64:ppc64el (1.20+ds-1) ... 157s Selecting previously unselected package libimagequant0:ppc64el. 157s Preparing to unpack .../21-libimagequant0_2.18.0-1build1_ppc64el.deb ... 157s Unpacking libimagequant0:ppc64el (2.18.0-1build1) ... 157s Selecting previously unselected package libjpeg-turbo8:ppc64el. 157s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-2ubuntu2_ppc64el.deb ... 157s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu2) ... 157s Selecting previously unselected package libjpeg8:ppc64el. 157s Preparing to unpack .../23-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 157s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 157s Selecting previously unselected package libjs-jquery. 157s Preparing to unpack .../24-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 157s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 157s Selecting previously unselected package libjs-jquery-ui. 157s Preparing to unpack .../25-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 157s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 157s Selecting previously unselected package liblapack3:ppc64el. 157s Preparing to unpack .../26-liblapack3_3.12.0-3build2_ppc64el.deb ... 157s Unpacking liblapack3:ppc64el (3.12.0-3build2) ... 157s Selecting previously unselected package liblbfgsb0:ppc64el. 157s Preparing to unpack .../27-liblbfgsb0_3.0+dfsg.4-1build1_ppc64el.deb ... 157s Unpacking liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 157s Selecting previously unselected package liblcms2-2:ppc64el. 157s Preparing to unpack .../28-liblcms2-2_2.16-2_ppc64el.deb ... 157s Unpacking liblcms2-2:ppc64el (2.16-2) ... 157s Selecting previously unselected package liblerc4:ppc64el. 157s Preparing to unpack .../29-liblerc4_4.0.0+ds-4ubuntu2_ppc64el.deb ... 157s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu2) ... 157s Selecting previously unselected package libqhull-r8.0:ppc64el. 157s Preparing to unpack .../30-libqhull-r8.0_2020.2-6build1_ppc64el.deb ... 157s Unpacking libqhull-r8.0:ppc64el (2020.2-6build1) ... 157s Selecting previously unselected package libraqm0:ppc64el. 157s Preparing to unpack .../31-libraqm0_0.10.1-1build1_ppc64el.deb ... 157s Unpacking libraqm0:ppc64el (0.10.1-1build1) ... 157s Selecting previously unselected package libsharpyuv0:ppc64el. 157s Preparing to unpack .../32-libsharpyuv0_1.4.0-0.1_ppc64el.deb ... 157s Unpacking libsharpyuv0:ppc64el (1.4.0-0.1) ... 157s Selecting previously unselected package libjbig0:ppc64el. 157s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 157s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 157s Selecting previously unselected package libwebp7:ppc64el. 157s Preparing to unpack .../34-libwebp7_1.4.0-0.1_ppc64el.deb ... 157s Unpacking libwebp7:ppc64el (1.4.0-0.1) ... 158s Selecting previously unselected package libtiff6:ppc64el. 158s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_ppc64el.deb ... 158s Unpacking libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ... 158s Selecting previously unselected package libwebpdemux2:ppc64el. 158s Preparing to unpack .../36-libwebpdemux2_1.4.0-0.1_ppc64el.deb ... 158s Unpacking libwebpdemux2:ppc64el (1.4.0-0.1) ... 158s Selecting previously unselected package libwebpmux3:ppc64el. 158s Preparing to unpack .../37-libwebpmux3_1.4.0-0.1_ppc64el.deb ... 158s Unpacking libwebpmux3:ppc64el (1.4.0-0.1) ... 158s Selecting previously unselected package libxslt1.1:ppc64el. 158s Preparing to unpack .../38-libxslt1.1_1.1.39-0exp1ubuntu1_ppc64el.deb ... 158s Unpacking libxslt1.1:ppc64el (1.1.39-0exp1ubuntu1) ... 158s Selecting previously unselected package python-matplotlib-data. 158s Preparing to unpack .../39-python-matplotlib-data_3.8.3-3_all.deb ... 158s Unpacking python-matplotlib-data (3.8.3-3) ... 158s Selecting previously unselected package python3-appdirs. 158s Preparing to unpack .../40-python3-appdirs_1.4.4-4_all.deb ... 158s Unpacking python3-appdirs (1.4.4-4) ... 158s Selecting previously unselected package python3-six. 158s Preparing to unpack .../41-python3-six_1.16.0-7_all.deb ... 158s Unpacking python3-six (1.16.0-7) ... 158s Selecting previously unselected package python3-dateutil. 158s Preparing to unpack .../42-python3-dateutil_2.9.0-2_all.deb ... 158s Unpacking python3-dateutil (2.9.0-2) ... 158s Selecting previously unselected package libopenjp2-7:ppc64el. 158s Preparing to unpack .../43-libopenjp2-7_2.5.0-2ubuntu1_ppc64el.deb ... 158s Unpacking libopenjp2-7:ppc64el (2.5.0-2ubuntu1) ... 158s Selecting previously unselected package python3-pil:ppc64el. 158s Preparing to unpack .../44-python3-pil_10.4.0-1ubuntu1_ppc64el.deb ... 158s Unpacking python3-pil:ppc64el (10.4.0-1ubuntu1) ... 158s Selecting previously unselected package python3.12-tk. 158s Preparing to unpack .../45-python3.12-tk_3.12.7-3_ppc64el.deb ... 158s Unpacking python3.12-tk (3.12.7-3) ... 158s Selecting previously unselected package python3.13-tk. 158s Preparing to unpack .../46-python3.13-tk_3.13.0-2_ppc64el.deb ... 158s Unpacking python3.13-tk (3.13.0-2) ... 158s Selecting previously unselected package python3-tk:ppc64el. 158s Preparing to unpack .../47-python3-tk_3.12.7-1_ppc64el.deb ... 158s Unpacking python3-tk:ppc64el (3.12.7-1) ... 158s Selecting previously unselected package python3-pil.imagetk:ppc64el. 158s Preparing to unpack .../48-python3-pil.imagetk_10.4.0-1ubuntu1_ppc64el.deb ... 158s Unpacking python3-pil.imagetk:ppc64el (10.4.0-1ubuntu1) ... 158s Selecting previously unselected package python3-numpy. 158s Preparing to unpack .../49-python3-numpy_1%3a1.26.4+ds-11build1_ppc64el.deb ... 158s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 159s Selecting previously unselected package python3-contourpy. 159s Preparing to unpack .../50-python3-contourpy_1.3.0-2_ppc64el.deb ... 159s Unpacking python3-contourpy (1.3.0-2) ... 159s Selecting previously unselected package python3-cycler. 159s Preparing to unpack .../51-python3-cycler_0.12.1-1_all.deb ... 159s Unpacking python3-cycler (0.12.1-1) ... 159s Selecting previously unselected package python3-brotli. 159s Preparing to unpack .../52-python3-brotli_1.1.0-2build2_ppc64el.deb ... 159s Unpacking python3-brotli (1.1.0-2build2) ... 159s Selecting previously unselected package python3-decorator. 159s Preparing to unpack .../53-python3-decorator_5.1.1-5_all.deb ... 159s Unpacking python3-decorator (5.1.1-5) ... 159s Selecting previously unselected package python3-scipy. 159s Preparing to unpack .../54-python3-scipy_1.13.1-5_ppc64el.deb ... 159s Unpacking python3-scipy (1.13.1-5) ... 160s Selecting previously unselected package python3-ufolib2. 160s Preparing to unpack .../55-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 160s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 160s Selecting previously unselected package python3-mpmath. 160s Preparing to unpack .../56-python3-mpmath_1.3.0-1_all.deb ... 160s Unpacking python3-mpmath (1.3.0-1) ... 160s Selecting previously unselected package python3-sympy. 160s Preparing to unpack .../57-python3-sympy_1.13.3-1_all.deb ... 160s Unpacking python3-sympy (1.13.3-1) ... 161s Selecting previously unselected package python3-tz. 161s Preparing to unpack .../58-python3-tz_2024.1-2_all.deb ... 161s Unpacking python3-tz (2024.1-2) ... 161s Selecting previously unselected package python3-fs. 161s Preparing to unpack .../59-python3-fs_2.4.16-4_all.deb ... 161s Unpacking python3-fs (2.4.16-4) ... 161s Selecting previously unselected package python3-lxml:ppc64el. 161s Preparing to unpack .../60-python3-lxml_5.3.0-1_ppc64el.deb ... 161s Unpacking python3-lxml:ppc64el (5.3.0-1) ... 161s Selecting previously unselected package python3-lz4. 161s Preparing to unpack .../61-python3-lz4_4.0.2+dfsg-1build4_ppc64el.deb ... 161s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 161s Selecting previously unselected package python3-unicodedata2. 161s Preparing to unpack .../62-python3-unicodedata2_15.1.0+ds-1build1_ppc64el.deb ... 161s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 161s Selecting previously unselected package unicode-data. 161s Preparing to unpack .../63-unicode-data_15.1.0-1_all.deb ... 161s Unpacking unicode-data (15.1.0-1) ... 161s Selecting previously unselected package python3-fonttools. 161s Preparing to unpack .../64-python3-fonttools_4.46.0-1build2_ppc64el.deb ... 161s Unpacking python3-fonttools (4.46.0-1build2) ... 161s Selecting previously unselected package python3-kiwisolver. 161s Preparing to unpack .../65-python3-kiwisolver_1.4.7-2_ppc64el.deb ... 161s Unpacking python3-kiwisolver (1.4.7-2) ... 161s Selecting previously unselected package python3-packaging. 161s Preparing to unpack .../66-python3-packaging_24.1-1_all.deb ... 161s Unpacking python3-packaging (24.1-1) ... 161s Selecting previously unselected package python3-matplotlib. 161s Preparing to unpack .../67-python3-matplotlib_3.8.3-3_ppc64el.deb ... 161s Unpacking python3-matplotlib (3.8.3-3) ... 162s Selecting previously unselected package python3-pandas-lib:ppc64el. 162s Preparing to unpack .../68-python3-pandas-lib_2.2.3+dfsg-5_ppc64el.deb ... 162s Unpacking python3-pandas-lib:ppc64el (2.2.3+dfsg-5) ... 162s Selecting previously unselected package python3-pandas. 162s Preparing to unpack .../69-python3-pandas_2.2.3+dfsg-5_all.deb ... 162s Unpacking python3-pandas (2.2.3+dfsg-5) ... 162s Selecting previously unselected package python3-bioframe. 162s Preparing to unpack .../70-python3-bioframe_0.4.1-1_all.deb ... 162s Unpacking python3-bioframe (0.4.1-1) ... 162s Selecting previously unselected package python3-colorama. 162s Preparing to unpack .../71-python3-colorama_0.4.6-4_all.deb ... 162s Unpacking python3-colorama (0.4.6-4) ... 162s Selecting previously unselected package python3-click. 162s Preparing to unpack .../72-python3-click_8.1.7-2_all.deb ... 162s Unpacking python3-click (8.1.7-2) ... 162s Selecting previously unselected package python3-iniconfig. 162s Preparing to unpack .../73-python3-iniconfig_1.1.1-2_all.deb ... 162s Unpacking python3-iniconfig (1.1.1-2) ... 162s Selecting previously unselected package python3-pysam. 162s Preparing to unpack .../74-python3-pysam_0.22.1+ds-2_ppc64el.deb ... 162s Unpacking python3-pysam (0.22.1+ds-2) ... 163s Selecting previously unselected package python3-pairtools. 163s Preparing to unpack .../75-python3-pairtools_1.0.3-1build1_ppc64el.deb ... 163s Unpacking python3-pairtools (1.0.3-1build1) ... 163s Selecting previously unselected package python3-pluggy. 163s Preparing to unpack .../76-python3-pluggy_1.5.0-1_all.deb ... 163s Unpacking python3-pluggy (1.5.0-1) ... 163s Selecting previously unselected package python3-pytest. 163s Preparing to unpack .../77-python3-pytest_8.3.3-1_all.deb ... 163s Unpacking python3-pytest (8.3.3-1) ... 163s Selecting previously unselected package autopkgtest-satdep. 163s Preparing to unpack .../78-1-autopkgtest-satdep.deb ... 163s Unpacking autopkgtest-satdep (0) ... 163s Setting up libhtscodecs2:ppc64el (1.6.1-1) ... 163s Setting up libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 163s Setting up liblcms2-2:ppc64el (2.16-2) ... 163s Setting up python3-iniconfig (1.1.1-2) ... 163s Setting up libsharpyuv0:ppc64el (1.4.0-0.1) ... 163s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu2) ... 163s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 163s Setting up python3-colorama (0.4.6-4) ... 163s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 163s Setting up python3-unicodedata2 (15.1.0+ds-1build1) ... 163s Setting up fonts-lyx (2.4.2.1-1) ... 163s Setting up x11-common (1:7.7+23ubuntu3) ... 164s Setting up libdeflate0:ppc64el (1.22-1) ... 164s Setting up libqhull-r8.0:ppc64el (2020.2-6build1) ... 164s Setting up libgomp1:ppc64el (14.2.0-8ubuntu1) ... 164s Setting up python3-click (8.1.7-2) ... 164s Setting up libjbig0:ppc64el (2.1-6.1ubuntu2) ... 164s Setting up python3-tz (2024.1-2) ... 164s Setting up unicode-data (15.1.0-1) ... 164s Setting up python3-six (1.16.0-7) ... 165s Setting up python3-decorator (5.1.1-5) ... 165s Setting up libblas3:ppc64el (3.12.0-3build2) ... 165s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 165s Setting up python3-packaging (24.1-1) ... 165s Setting up python3-brotli (1.1.0-2build2) ... 165s Setting up python3-cycler (0.12.1-1) ... 165s Setting up libimagequant0:ppc64el (2.18.0-1build1) ... 165s Setting up fonts-dejavu-mono (2.37-8) ... 165s Setting up python3-kiwisolver (1.4.7-2) ... 165s Setting up libtcl8.6:ppc64el (8.6.15+dfsg-2) ... 165s Setting up fonts-dejavu-core (2.37-8) ... 165s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu2) ... 165s Setting up libgfortran5:ppc64el (14.2.0-8ubuntu1) ... 165s Setting up python3-pluggy (1.5.0-1) ... 166s Setting up libwebp7:ppc64el (1.4.0-0.1) ... 166s Setting up libxslt1.1:ppc64el (1.1.39-0exp1ubuntu1) ... 166s Setting up libhts3t64:ppc64el (1.20+ds-1) ... 166s Setting up libopenjp2-7:ppc64el (2.5.0-2ubuntu1) ... 166s Setting up libharfbuzz0b:ppc64el (10.0.1-1) ... 166s Setting up python3-dateutil (2.9.0-2) ... 166s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 166s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 166s Setting up python3-mpmath (1.3.0-1) ... 167s Setting up python-matplotlib-data (3.8.3-3) ... 167s Setting up libwebpmux3:ppc64el (1.4.0-0.1) ... 167s Setting up python3-appdirs (1.4.4-4) ... 167s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 167s Setting up python3-sympy (1.13.3-1) ... 177s Setting up liblapack3:ppc64el (3.12.0-3build2) ... 177s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 177s Setting up python3-pysam (0.22.1+ds-2) ... 177s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 177s Setting up python3-pytest (8.3.3-1) ... 178s Setting up libwebpdemux2:ppc64el (1.4.0-0.1) ... 178s Setting up python3-fs (2.4.16-4) ... 178s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 178s Setting up libraqm0:ppc64el (0.10.1-1build1) ... 178s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 180s Setting up python3-lxml:ppc64el (5.3.0-1) ... 181s Setting up libtiff6:ppc64el (4.5.1+git230720-4ubuntu4) ... 181s Setting up python3-contourpy (1.3.0-2) ... 181s Setting up libfontconfig1:ppc64el (2.15.0-1.1ubuntu2) ... 181s Setting up liblbfgsb0:ppc64el (3.0+dfsg.4-1build1) ... 181s Setting up libxft2:ppc64el (2.3.6-1build1) ... 181s Setting up python3-scipy (1.13.1-5) ... 185s Setting up libtk8.6:ppc64el (8.6.15-1) ... 185s Setting up python3-pandas-lib:ppc64el (2.2.3+dfsg-5) ... 185s Setting up python3.12-tk (3.12.7-3) ... 186s Setting up python3.13-tk (3.13.0-2) ... 186s Setting up python3-pil:ppc64el (10.4.0-1ubuntu1) ... 186s Setting up python3-pandas (2.2.3+dfsg-5) ... 194s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 194s Setting up blt (2.5.3+dfsg-7build1) ... 194s Setting up python3-tk:ppc64el (3.12.7-1) ... 194s Setting up python3-pil.imagetk:ppc64el (10.4.0-1ubuntu1) ... 194s Setting up python3-fonttools (4.46.0-1build2) ... 195s Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... 196s Setting up python3-matplotlib (3.8.3-3) ... 198s Setting up python3-bioframe (0.4.1-1) ... 198s Setting up python3-pairtools (1.0.3-1build1) ... 198s /usr/lib/python3/dist-packages/pairtools/cli/select.py:90: SyntaxWarning: invalid escape sequence '\d' 198s """Select pairs according to some condition. 198s /usr/lib/python3/dist-packages/pairtools/lib/stats.py:928: SyntaxWarning: invalid escape sequence '\w' 198s """Extract the name of the tile for each read name in the series 198s Setting up autopkgtest-satdep (0) ... 198s Processing triggers for libc-bin (2.40-1ubuntu3) ... 198s Processing triggers for man-db (2.12.1-3) ... 205s (Reading database ... 83199 files and directories currently installed.) 205s Removing autopkgtest-satdep (0) ... 205s autopkgtest [15:23:53]: test upstream-tests: [----------------------- 206s 206s rm -rf pairtools 206s 206s pytest-3 --ignore=.pc 208s ============================= test session starts ============================== 208s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 208s rootdir: /tmp/autopkgtest.mrt1ZB/build.cKS/src 208s configfile: pytest.ini 208s testpaths: tests 208s plugins: typeguard-4.4.1 208s collected 31 items 208s 213s tests/test_dedup.py . [ 3%] 217s tests/test_filterbycov.py . [ 6%] 218s tests/test_flip.py . [ 9%] 219s tests/test_header.py . [ 12%] 219s tests/test_headerops.py ....... [ 35%] 221s tests/test_markasdup.py . [ 38%] 225s tests/test_merge.py . [ 41%] 228s tests/test_parse.py ... [ 51%] 230s tests/test_parse2.py .. [ 58%] 232s tests/test_restrict.py . [ 61%] 234s tests/test_scaling.py . [ 64%] 245s tests/test_select.py ....... [ 87%] 247s tests/test_sort.py . [ 90%] 248s tests/test_split.py . [ 93%] 257s tests/test_stats.py .. [100%] 257s 257s =============================== warnings summary =============================== 257s ../../../../usr/lib/python3/dist-packages/pairtools/lib/fileio.py:2 257s /usr/lib/python3/dist-packages/pairtools/lib/fileio.py:2: DeprecationWarning: 'pipes' is deprecated and slated for removal in Python 3.13 257s import pipes 257s 257s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 257s ======================== 31 passed, 1 warning in 50.99s ======================== 257s ALL PASS 257s 257s echo ALL PASS 258s autopkgtest [15:24:46]: test upstream-tests: -----------------------] 258s autopkgtest [15:24:46]: test upstream-tests: - - - - - - - - - - results - - - - - - - - - - 258s upstream-tests PASS 259s autopkgtest [15:24:47]: @@@@@@@@@@@@@@@@@@@@ summary 259s upstream-tests PASS 263s nova [W] Using flock in prodstack6-ppc64el 263s flock: timeout while waiting to get lock 263s Creating nova instance adt-plucky-ppc64el-pairtools-20241113-152028-juju-7f2275-prod-proposed-migration-environment-15-e0aad644-29d0-45e5-a6b7-4dc5e6c15d58 from image adt/ubuntu-plucky-ppc64el-server-20241113.img (UUID 0c5715b6-5cca-4485-b8bf-b85dfd917a5f)...