0s autopkgtest [09:13:26]: starting date and time: 2024-11-30 09:13:26+0000 0s autopkgtest [09:13:26]: git checkout: be626eda Fix armhf LXD image generation for plucky 0s autopkgtest [09:13:26]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ntaj9e1h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:fftw3,src:openmpi --apt-upgrade glam2 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=fftw3/3.3.10-2fakesync1build1 openmpi/5.0.6-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-ppc64el-31.secgroup --name adt-plucky-ppc64el-glam2-20241130-091326-juju-7f2275-prod-proposed-migration-environment-15-a9cdbef2-850a-4048-9d94-89a157426530 --image adt/ubuntu-plucky-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 77s autopkgtest [09:14:43]: testbed dpkg architecture: ppc64el 77s autopkgtest [09:14:43]: testbed apt version: 2.9.14ubuntu1 78s autopkgtest [09:14:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s autopkgtest [09:14:44]: testbed release detected to be: None 79s autopkgtest [09:14:45]: updating testbed package index (apt update) 79s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 79s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 79s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 79s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 79s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.1 kB] 79s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [64.6 kB] 79s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 79s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [788 kB] 80s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el Packages [96.1 kB] 80s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted ppc64el Packages [928 B] 80s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe ppc64el Packages [655 kB] 80s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse ppc64el Packages [11.0 kB] 80s Fetched 1714 kB in 1s (1677 kB/s) 81s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 82s Calculating upgrade... 82s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s autopkgtest [09:14:48]: upgrading testbed (apt dist-upgrade and autopurge) 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 83s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 83s Starting 2 pkgProblemResolver with broken count: 0 83s Done 83s Entering ResolveByKeep 83s 83s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Starting pkgProblemResolver with broken count: 0 84s Starting 2 pkgProblemResolver with broken count: 0 84s Done 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s autopkgtest [09:14:52]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 13:49:23 UTC 2024 86s autopkgtest [09:14:52]: @@@@@@@@@@@@@@@@@@@@ apt-source glam2 88s Get:1 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (dsc) [2006 B] 88s Get:2 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (tar) [238 kB] 88s Get:3 http://ftpmaster.internal/ubuntu plucky/universe glam2 1064-9 (diff) [12.6 kB] 88s gpgv: Signature made Mon Dec 7 21:41:36 2020 UTC 88s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 88s gpgv: issuer "tille@debian.org" 88s gpgv: Can't check signature: No public key 88s dpkg-source: warning: cannot verify inline signature for ./glam2_1064-9.dsc: no acceptable signature found 88s autopkgtest [09:14:54]: testing package glam2 version 1064-9 89s autopkgtest [09:14:55]: build not needed 89s autopkgtest [09:14:55]: test check-no-args: preparing testbed 89s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Starting pkgProblemResolver with broken count: 0 89s Starting 2 pkgProblemResolver with broken count: 0 89s Done 90s The following NEW packages will be installed: 90s glam2 libfftw3-double3 libgomp1 90s 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. 90s Need to get 851 kB of archives. 90s After this operation, 2427 kB of additional disk space will be used. 90s Get:1 http://ftpmaster.internal/ubuntu plucky/main ppc64el libgomp1 ppc64el 14.2.0-8ubuntu1 [161 kB] 90s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main ppc64el libfftw3-double3 ppc64el 3.3.10-2fakesync1build1 [443 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe ppc64el glam2 ppc64el 1064-9 [247 kB] 90s Fetched 851 kB in 1s (1572 kB/s) 90s Selecting previously unselected package libgomp1:ppc64el. 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74178 files and directories currently installed.) 91s Preparing to unpack .../libgomp1_14.2.0-8ubuntu1_ppc64el.deb ... 91s Unpacking libgomp1:ppc64el (14.2.0-8ubuntu1) ... 91s Selecting previously unselected package libfftw3-double3:ppc64el. 91s Preparing to unpack .../libfftw3-double3_3.3.10-2fakesync1build1_ppc64el.deb ... 91s Unpacking libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 91s Selecting previously unselected package glam2. 91s Preparing to unpack .../glam2_1064-9_ppc64el.deb ... 91s Unpacking glam2 (1064-9) ... 91s Setting up libgomp1:ppc64el (14.2.0-8ubuntu1) ... 91s Setting up libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 91s Setting up glam2 (1064-9) ... 91s Processing triggers for man-db (2.13.0-1) ... 91s Processing triggers for libc-bin (2.40-1ubuntu3) ... 92s autopkgtest [09:14:58]: test check-no-args: [----------------------- 92s Usage: glam2 [options] alphabet my_seqs.fa 92s Alphabets: p = proteins, n = nucleotides, other = alphabet file 92s Options (default settings): 92s -h: show all options and their default settings 92s -o: output file (stdout) 92s -r: number of alignment runs (10) 92s -n: end each run after this many iterations without improvement (10000) 92s -2: examine both strands - forward and reverse complement 92s -z: minimum number of sequences in the alignment (2) 92s -a: minimum number of aligned columns (2) 92s -b: maximum number of aligned columns (50) 92s -w: initial number of aligned columns (20) 92s -d: Dirichlet mixture file 92s -D: deletion pseudocount (0.1) 92s -E: no-deletion pseudocount (2.0) 92s -I: insertion pseudocount (0.02) 92s -J: no-insertion pseudocount (1.0) 92s -q: weight for generic versus sequence-set-specific residue abundances (1e+99) 92s -t: initial temperature (1.2) 92s -c: cooling factor per n iterations (1.44) 92s -u: temperature lower bound (0.1) 92s -p: print progress information at each iteration 92s -m: column-sampling moves per site-sampling move (1.0) 92s -x: site sampling algorithm: 0=FAST 1=SLOW 2=FFT (0) 92s -s: seed for pseudo-random numbers (1) 92s SUCCESS: Help text is there! 93s autopkgtest [09:14:59]: test check-no-args: -----------------------] 93s autopkgtest [09:14:59]: test check-no-args: - - - - - - - - - - results - - - - - - - - - - 93s check-no-args PASS 94s autopkgtest [09:15:00]: test run-unit-test: preparing testbed 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 94s Starting pkgProblemResolver with broken count: 0 94s Starting 2 pkgProblemResolver with broken count: 0 94s Done 95s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s autopkgtest [09:15:01]: test run-unit-test: [----------------------- 97s Run 1... 12350 iterations 99s Run 2... 17270 iterations 101s Run 3... 19781 iterations 102s Run 4... 12220 iterations 104s Run 5... 18950 iterations 106s Run 6... 15650 iterations 111s Run 7... 31104 iterations 113s Run 8... 21854 iterations 115s Run 9... 11813 iterations 116s Run 10... 11182 iterations 116s 116s GLAM2: Gapped Local Alignment of Motifs 116s Version 1064 116s 116s glam2 p lipocalin.s 116s Sequences: 5 116s Greatest sequence length: 189 116s Residue counts: A=65 C=26 D=62 E=70 F=39 G=52 H=23 I=43 K=78 L=79 M=16 N=48 P=29 Q=26 R=28 S=53 T=43 V=63 W=15 Y=45 x=0 116s 116s Score: 80.3660 Columns: 20 Sequences: 5 116s 116s ******************** 116s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 116s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 116s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 116s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 116s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 116s 116s KPVDNFDISKFAGTWHEIAK 116s QTGEDLNKAAIH A YALIL 116s RVKKG LENVN E WSM M 116s S MN VQRY K TV 116s R W 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 116s 0 -0.0655 116s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 116s 0 -0.0655 116s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 116s 0 -0.0655 116s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 116s 0 -0.0655 116s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 116s 0 -0.0655 116s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 116s 0 -0.0655 116s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 116s 0 -0.0655 116s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 116s 0 -0.0655 116s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 116s 0 -0.0655 116s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 116s 0 -0.0655 116s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 116s 116s Score: 80.3660 Columns: 20 Sequences: 5 116s 116s ******************** 116s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 116s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 116s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 116s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 116s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 116s 116s KPVDNFDISKFAGTWHEIAK 116s QTGEDLNKAAIH A YALIL 116s RVKKG LENVN E WSM M 116s S MN VQRY K TV 116s R W 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 116s 0 -0.0655 116s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 116s 0 -0.0655 116s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 116s 0 -0.0655 116s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 116s 0 -0.0655 116s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 116s 0 -0.0655 116s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 116s 0 -0.0655 116s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 116s 0 -0.0655 116s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 116s 0 -0.0655 116s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 116s 0 -0.0655 116s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 116s 0 -0.0655 116s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 116s 116s Score: 80.3660 Columns: 20 Sequences: 5 116s 116s ******************** 116s ICYA_MANSE 13 KPVNDFDLSAFAGAWHEIAK 32 + 33.3 116s LACB_BOVIN 21 QTMKGLDIQKVAGTWYSLAM 40 + 18.8 116s BBP_PIEBR 12 KPVDNFDWSNYHGKWWEVAK 31 + 27.9 116s RETB_BOVIN 10 RVKENFDKARFAGTWYAMAK 29 + 25.5 116s MUP2_MOUSE 23 STGRNFNVEKINGEWHTIIL 42 + 13.4 116s 116s KPVDNFDISKFAGTWHEIAK 116s QTGEDLNKAAIH A YALIL 116s RVKKG LENVN E WSM M 116s S MN VQRY K TV 116s R W 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 0 0 1.51 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 1.06 116s 0 -0.0655 116s 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 -2.00 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0.233 116s 0 -0.0655 116s 0 0 1 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 4.91 116s 0 -0.0655 116s 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 9.87 116s 0 -0.0655 116s 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 9.08 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 1 0 0 -1.61 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 -0.0557 116s 0 -0.0655 116s 1 0 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 0 0.836 116s 0 -0.0655 116s 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 2.40 116s 0 -0.0655 116s 3 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1.35 116s 0 -0.0655 116s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12.9 116s 0 -0.0655 116s 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0.355 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 22.5 116s 0 -0.0655 116s 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 7.34 116s 0 -0.0655 116s 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 -0.00544 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 5.12 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 1.70 116s 116s Score: 77.3362 Columns: 21 Sequences: 5 116s 116s ********************* 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 116s 116s NDFHWVLDTDYKNYAIAYLCN 116s KVL IIA NDKFLLFCMED 116s LDN PK ET IMGHNIK 116s T P S VN S R 116s V T Q Y 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 116s Score: 77.3362 Columns: 21 Sequences: 5 116s 116s ********************* 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 116s 116s NDFHWVLDTDYKNYAIAYLCN 116s KVL IIA NDKFLLFCMED 116s LDN PK ET IMGHNIK 116s T P S VN S R 116s V T Q Y 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 116s Score: 77.3362 Columns: 21 Sequences: 5 116s 116s ********************* 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 116s 116s NDFHWVLDTDYKNYAIAYLCN 116s KVL IIA NDKFLLFCMED 116s LDN PK ET IMGHNIK 116s T P S VN S R 116s V T Q Y 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 116s Score: 77.3362 Columns: 21 Sequences: 5 116s 116s ********************* 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCD 120 + 37.8 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMEN 125 + 20.1 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCK 116 + 27.2 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCR 121 + 26.7 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLIN 125 + 18.6 116s 116s NDFHWVLDTDYKNYAIAYLCN 116s KVL IIA NDKFLLFCMED 116s LDN PK ET IMGHNIK 116s T P S VN S R 116s V T Q Y 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 116s Score: 75.7471 Columns: 26 Sequences: 5 116s 116s ************************** 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 116s 116s NDFHWVLDTDYKNYAIAYLCNYAEDE 116s KVL IIA NDKFLLFCMEDEDDGK 116s LDN PK ET IMGHNIKLHNLD 116s T P S VN S RSKPP 116s V T Q Y L 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 0 -0.0655 116s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 116s 0 -0.0655 116s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 116s 0 -0.0655 116s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 116s 116s Score: 75.7471 Columns: 26 Sequences: 5 116s 116s ************************** 116s ICYA_MANSE 100 NLVPWVLATDYKNYAINYNCDYHPDK 125 + 40.6 116s LACB_BOVIN 106 NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 20.6 116s BBP_PIEBR 97 NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.0 116s RETB_BOVIN 101 NDDHWIIDTDYETFAVQYSCRLLNLD 126 + 20.6 116s MUP2_MOUSE 106 NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 18.1 116s 116s NDFHWVLDTDYKNYAIAYLCNYAEDE 116s KVL IIA NDKFLLFCMEDEDDGK 116s LDN PK ET IMGHNIKLHNLD 116s T P S VN S RSKPP 116s V T Q Y L 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 0 -0.0655 116s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 116s 0 -0.0655 116s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 116s 0 -0.0655 116s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 116s 116s Score: 73.5314 Columns: 41 Sequences: 5 116s 116s ********.*******.......************************** 116s ICYA_MANSE 81 KYTKQGKY.VMTFK.FGQRVV..NLVPWVLATDYKNYAINYNCDYHPDK 125 + 38.9 116s LACB_BOVIN 91 KTKIPAVF.KIDALNE.......NKVL.VLDTDYKKYLLFCMENSAEPE 130 + 21.8 116s BBP_PIEBR 78 DSKIGKIYHKLTYGGVTKE....NVFN.VLSTDNKNYIIGYYCKYDEDK 121 + 32.8 116s RETB_BOVIN 79 DTEDPAKF.KMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSCRLLNLD 126 + 34.1 116s MUP2_MOUSE 91 KTEKAGEY.SVTYDGF.......NTFT.IPKTDYDNFLMAHLINEKDGE 130 + 33.6 116s 116s KTEIPAKY KMTYDGF NDFHWVLDTDYKNYAIAYLCNYAEDE 116s DSKKAGEF SIDAGNV KVL IIA NDKFLLFCMEDEDDGK 116s YTDGKI VLKFK E LDN PK ET IMGHNIKLHNLD 116s Q V V L T P S VN S RSKPP 116s W V T Q Y L 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 0 0 2 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 5.22 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 0 1 0 2.46 116s 0 -0.0655 116s 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 2.94 116s 0 -0.0655 116s 0 0 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0.216 116s 0 -0.0655 116s 1 0 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 -1.06 116s 0 -0.0655 116s 2 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0.824 116s 0 -0.0655 116s 0 0 0 1 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 0 -0.808 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 1 -8.30 116s 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 1 0 1 0 0 0 1.49 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 1 2 0 0 0 0 0 0 1 0 0 0 4.57 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 3 0 0 0 0 2.41 116s 0 -0.0655 116s 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.65 116s 0 -0.0655 116s 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 -4.16 116s 0 -0.0655 116s 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 -1.19 116s 0 -0.0655 116s 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.743 116s 15 -23.5 116s 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 14.2 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 -3.28 116s 0 -0.0655 116s 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0.278 116s 0 -0.0655 116s 0 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 -2.97 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 3 -4.19 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 3 0 0 0 8.67 116s 0 -0.0655 116s 0 0 0 0 0 0 0 1 0 3 0 0 1 0 0 0 0 0 0 0 0 1.58 116s 0 -0.0655 116s 1 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0.395 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 12.2 116s 0 -0.0655 116s 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13.9 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 4 0 8.89 116s 0 -0.0655 116s 0 0 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 4.07 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 3.33 116s 0 -0.0655 116s 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 11.1 116s 0 -0.0655 116s 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 2.04 116s 0 -0.0655 116s 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 1 0 0 0 4.05 116s 0 -0.0655 116s 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 -3.34 116s 0 -0.0655 116s 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 3 0 5.78 116s 0 -0.0655 116s 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 -2.50 116s 0 -0.0655 116s 0 3 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2.99 116s 0 -0.0655 116s 0 0 1 0 0 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 1.52 116s 0 -0.0655 116s 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 -0.975 116s 0 -0.0655 116s 1 0 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 -2.88 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1.18 116s 0 -0.0655 116s 0 0 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 -2.32 116s 0 -0.0655 116s 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 3.72 116s 116s Run 1... 4122 iterations 116s 116s GLAM2: Gapped Local Alignment of Motifs 116s Version 1064 116s 116s glam2 -r 1 -n 1000 p crp0.s 116s Sequences: 18 116s Greatest sequence length: 105 116s Residue counts: A=572 C=345 D=0 E=0 F=0 G=395 H=0 I=0 K=0 L=0 M=0 N=0 P=0 Q=0 R=0 S=0 T=578 V=0 W=0 Y=0 x=0 116s 116s Score: 1431.87 Columns: 46 Sequences: 18 116s 116s *********.......*****.................********...............********........***.........****..********* 116s ce1cg 31 GCGAGAATAG......CGCGTGGTG.............TGAAAGACTGTTTTTTTGATCGTTTTCACAAAAA.....TGGAA.......GTCC..ACAGTCTTG 101 + 95.1 116s ara 31 TCACGGCAGAAAAGTCCACATTGATTATT.........TGCACGGCG..............TCACACTT........TGCTA.......TGCC..ATAGCATTT 94 + 114. 116s bglr1 37 ATATAACTTTATAAA.TTCCTAAAAT............TACACAAA...............GTTAATAAC.......TGTG........AGCAT.GGTCATATT 96 + 99.8 116s crp 46 ACATTGATG.......TACTGCATG.............TATGCAAAGGACG..........TCACATTACCG.....TGCAG.......TACA..GTTGATAGC 105 + 109. 116s cya 1 ACGGTGCTA.......CACTTG................TATGTAGCGCATC..........TTTCTTTACGG.....TCA.........ATCA..GCAAGGTGT 55 + 109. 116s deop2 18 AGATCGCAT.......TACAGTGATGCAAACTTG....TAAGTAGA...............TTTCCTTAAT......TGTGATGTG...TATC..GAAGTGTGT 84 + 105. 116s gale 10 AAACGGCTAAA.....TTCTTG................TGTAAACGA..............TTCCACTAATTTAT..TCCA........TGTC..ACACTTTTC 66 + 117. 116s ilv 21 TATCTGCAA.......TTCAG.................TACAAAACGTGATCA........ACCCCTCAATTT....TCCCTT......TGCT..GAAAAATTT 80 + 112. 116s lac 16 AGTTAGCTCA......CTCAT.................TAGGCACCCCAGGCT........TTACACTTTA......TGC.........TTCCG.GCTCGTATG 72 + 111. 116s male 4 TTACCGCCAA......TTCTG.................TAACAGAGA..............TCACACAAAGCGACGGTGGGGCGTAGG.GGCAA.GGAGGATGG 68 + 95.1 116s malk 22 ACACGGCTT.......CTGTGAACTAAACCGAGGTCA.TGTAAGGAA..............TTTCGTGA........TGT.........TGCTT.GCAAAAATC 85 + 109. 116s malt 50 ACAGTGCAAA......TTCAGACACA............TAAAAAAAC..............GTCATCGCT.......TGC.........ATTA..GAAAGGTTT 103 + 107. 116s ompa 30 ACAAGACTTTTTT...TTCATA................TGCCTGACGGA............GTTCACACT.......TGTAAGTT....TTCA..ACTACGTTG 89 + 113. 116s tnaa 9 ACATTAAAA.......TTCTTACGTAATTTATAATCTTTAAAAAAAGCA............TTTAATAT........TGC.........TCCCC.GAACGATTG 75 + 109. 116s uxu1 32 AACCCAATTAGAA...TTCGGGATTGACATGTCT....TACCAAAAGGTAGAACTT.....ATACGCCA........TCTC........ATCC..GATGCAAGC 105 + 101. 116s pbr322 12 ATGCGGCAT.......CAGAGCAGATTG..........TACTGAGA...............GTGCACCATA......TGCGGTGTGAAATACC..GCACAGATG 75 + 108. 116s trn9cat 11 AGATCACTT.......CGCAGAA...............TAAATAAATCCTGGT........GTCCCTGT........TGA.........TACCGGGAAGCCCTG 67 + 107. 116s tdc 47 ATAACGATA.......CTCTGGAAAG............TATTGAAA...............GTTAATTTG.......TGAGT.......GGTC..GCACATATC 100 + 107. 116s 116s ACACGGCTA TTCAG TAAAAAAA TTTCACTA TGC TGCC GCAGAATTG 116s T TCAAAT CA TT GCGCGGC GCAA TAT CT ATTA AATCGGAGT 116s T T T C A ACT C 116s 116s A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 116s 14 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 37.3 116s 0 -0.100 116s 3 8 0 0 0 3 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 32.9 116s 0 -0.100 116s 12 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.5 116s 0 -0.100 116s 3 7 0 0 0 2 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.9 116s 0 -0.100 116s 2 5 0 0 0 6 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 26.4 116s 0 -0.100 116s 6 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40.1 116s 0 -0.100 116s 5 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62.9 116s 0 -0.100 116s 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 34.9 116s 0 -0.100 116s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 116s 27 -51.1 116s 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 52.5 116s 0 -0.100 116s 5 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 32.4 116s 0 -0.100 116s 0 16 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75.8 116s 0 -0.100 116s 8 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 26.2 116s 0 -0.100 116s 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 38.4 116s 102 -82.2 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 116s 0 -0.100 116s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 116s 0 -0.100 116s 6 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 31.2 116s 0 -0.100 116s 9 3 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 26.2 116s 0 -0.100 116s 8 4 0 0 0 2 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 26.9 116s 0 -0.100 116s 13 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 116s 0 -0.100 116s 11 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33.5 116s 0 -0.100 116s 10 6 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39.7 116s 67 -71.8 116s 2 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 30.8 116s 0 -0.100 116s 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 49.3 116s 0 -0.100 116s 5 4 0 0 0 1 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 29.1 116s 0 -0.100 116s 4 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66.8 116s 0 -0.100 116s 11 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 29.8 116s 0 -0.100 116s 0 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 0 0 54.3 116s 0 -0.100 116s 5 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 24.3 116s 0 -0.100 116s 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 33.0 116s 37 -57.9 116s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 64.5 116s 0 -0.100 116s 0 4 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47.7 116s 0 -0.100 116s 3 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 34.0 116s 42 -60.8 116s 4 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 31.4 116s 0 -0.100 116s 4 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 22.9 116s 0 -0.100 116s 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 68.5 116s 0 -0.100 116s 6 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 45.9 116s 7 -27.4 116s 4 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43.6 116s 0 -0.100 116s 6 8 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 35.2 116s 0 -0.100 116s 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 39.1 116s 0 -0.100 116s 5 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35.3 116s 0 -0.100 116s 6 4 0 0 0 5 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 24.4 116s 0 -0.100 116s 6 2 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 22.2 116s 0 -0.100 116s 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 0 0 0 33.9 116s 0 -0.100 116s 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 40.8 116s 0 -0.100 116s 0 5 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 31.3 116s 116s PASS 117s autopkgtest [09:15:23]: test run-unit-test: -----------------------] 117s run-unit-test PASS 117s autopkgtest [09:15:23]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 118s autopkgtest [09:15:24]: @@@@@@@@@@@@@@@@@@@@ summary 118s check-no-args PASS 118s run-unit-test PASS 122s nova [W] Using flock in prodstack6-ppc64el 122s Creating nova instance adt-plucky-ppc64el-glam2-20241130-091326-juju-7f2275-prod-proposed-migration-environment-15-a9cdbef2-850a-4048-9d94-89a157426530 from image adt/ubuntu-plucky-ppc64el-server-20241129.img (UUID 4310160b-3912-43a6-9b37-357145536086)...