0s autopkgtest [05:47:32]: starting date and time: 2024-11-15 05:47:32+0000 0s autopkgtest [05:47:32]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [05:47:32]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4sukf7p8/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade q2-taxa --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@lcy02-5.secgroup --name adt-plucky-i386-q2-taxa-20241115-054732-juju-7f2275-prod-proposed-migration-environment-20-55c5431b-fef5-4acc-a31a-a28b41fa5a35 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 48s autopkgtest [05:48:20]: testbed dpkg architecture: amd64 48s autopkgtest [05:48:20]: testbed apt version: 2.9.8 48s autopkgtest [05:48:20]: test architecture: i386 48s autopkgtest [05:48:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup 48s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 48s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 48s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1055 kB] 48s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 48s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [97.2 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [131 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [198 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [818 kB] 48s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [299 kB] 48s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [740 B] 48s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [9128 B] 49s Fetched 2737 kB in 0s (8012 kB/s) 49s Reading package lists... 50s Reading package lists... 50s Building dependency tree... 50s Reading state information... 51s Calculating upgrade... 51s The following NEW packages will be installed: 51s python3.13-gdbm 51s The following packages will be upgraded: 51s firmware-sof-signed grub-common grub-pc grub-pc-bin grub2-common libcap-ng0 51s libexpat1 libpython3-stdlib lxd-installer man-db pastebinit python3 51s python3-gdbm python3-minimal python3-systemd xfsprogs 51s 16 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 51s Need to get 13.7 MB of archives. 51s After this operation, 578 kB of additional disk space will be used. 51s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.12.7-1 [27.4 kB] 51s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.12.7-1 [24.0 kB] 51s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.12.7-1 [10.0 kB] 51s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 firmware-sof-signed all 2024.06-1ubuntu2 [7083 kB] 51s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libcap-ng0 amd64 0.8.5-3build1 [15.6 kB] 51s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libexpat1 amd64 2.6.4-1 [94.9 kB] 51s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 man-db amd64 2.13.0-1 [1352 kB] 51s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-gdbm amd64 3.13.0-2 [31.3 kB] 51s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-gdbm amd64 3.12.7-1 [8642 B] 51s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 grub2-common amd64 2.12-5ubuntu7 [672 kB] 51s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc amd64 2.12-5ubuntu7 [137 kB] 51s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-pc-bin amd64 2.12-5ubuntu7 [1127 kB] 51s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 grub-common amd64 2.12-5ubuntu7 [2110 kB] 51s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 lxd-installer all 9 [5084 B] 51s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 pastebinit all 1.7.1-1 [14.9 kB] 51s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-systemd amd64 235-1build5 [45.7 kB] 51s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 xfsprogs amd64 6.8.0-2.2ubuntu2 [926 kB] 51s Preconfiguring packages ... 52s Fetched 13.7 MB in 0s (84.0 MB/s) 52s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 52s Preparing to unpack .../python3-minimal_3.12.7-1_amd64.deb ... 52s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 52s Setting up python3-minimal (3.12.7-1) ... 52s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75542 files and directories currently installed.) 52s Preparing to unpack .../python3_3.12.7-1_amd64.deb ... 52s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 52s Preparing to unpack .../libpython3-stdlib_3.12.7-1_amd64.deb ... 52s Unpacking libpython3-stdlib:amd64 (3.12.7-1) over (3.12.6-0ubuntu1) ... 52s Preparing to unpack .../firmware-sof-signed_2024.06-1ubuntu2_all.deb ... 52s Unpacking firmware-sof-signed (2024.06-1ubuntu2) over (2024.06-1ubuntu1) ... 52s Preparing to unpack .../libcap-ng0_0.8.5-3build1_amd64.deb ... 52s Unpacking libcap-ng0:amd64 (0.8.5-3build1) over (0.8.5-1) ... 52s Setting up libcap-ng0:amd64 (0.8.5-3build1) ... 52s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75568 files and directories currently installed.) 52s Preparing to unpack .../00-libexpat1_2.6.4-1_amd64.deb ... 52s Unpacking libexpat1:amd64 (2.6.4-1) over (2.6.2-2) ... 52s Preparing to unpack .../01-man-db_2.13.0-1_amd64.deb ... 52s Unpacking man-db (2.13.0-1) over (2.12.1-3) ... 53s Selecting previously unselected package python3.13-gdbm. 53s Preparing to unpack .../02-python3.13-gdbm_3.13.0-2_amd64.deb ... 53s Unpacking python3.13-gdbm (3.13.0-2) ... 53s Preparing to unpack .../03-python3-gdbm_3.12.7-1_amd64.deb ... 53s Unpacking python3-gdbm:amd64 (3.12.7-1) over (3.12.6-1ubuntu1) ... 53s Preparing to unpack .../04-grub2-common_2.12-5ubuntu7_amd64.deb ... 53s Unpacking grub2-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 53s Preparing to unpack .../05-grub-pc_2.12-5ubuntu7_amd64.deb ... 53s Unpacking grub-pc (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 53s Preparing to unpack .../06-grub-pc-bin_2.12-5ubuntu7_amd64.deb ... 53s Unpacking grub-pc-bin (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 53s Preparing to unpack .../07-grub-common_2.12-5ubuntu7_amd64.deb ... 53s Unpacking grub-common (2.12-5ubuntu7) over (2.12-5ubuntu5.1) ... 53s Preparing to unpack .../08-lxd-installer_9_all.deb ... 53s Unpacking lxd-installer (9) over (8) ... 53s Preparing to unpack .../09-pastebinit_1.7.1-1_all.deb ... 53s Unpacking pastebinit (1.7.1-1) over (1.7.0-1) ... 53s Preparing to unpack .../10-python3-systemd_235-1build5_amd64.deb ... 53s Unpacking python3-systemd (235-1build5) over (235-1build4) ... 53s Preparing to unpack .../11-xfsprogs_6.8.0-2.2ubuntu2_amd64.deb ... 53s Unpacking xfsprogs (6.8.0-2.2ubuntu2) over (6.8.0-2.2ubuntu1) ... 53s Setting up libexpat1:amd64 (2.6.4-1) ... 53s Setting up firmware-sof-signed (2024.06-1ubuntu2) ... 53s Setting up man-db (2.13.0-1) ... 53s Updating database of manual pages ... 55s man-db.service is a disabled or a static unit not running, not starting it. 55s Setting up lxd-installer (9) ... 56s Setting up python3.13-gdbm (3.13.0-2) ... 56s Setting up libpython3-stdlib:amd64 (3.12.7-1) ... 56s Setting up python3 (3.12.7-1) ... 56s Setting up grub-common (2.12-5ubuntu7) ... 56s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 57s Setting up xfsprogs (6.8.0-2.2ubuntu2) ... 57s update-initramfs: deferring update (trigger activated) 58s Setting up python3-systemd (235-1build5) ... 58s Setting up python3-gdbm:amd64 (3.12.7-1) ... 58s Setting up grub2-common (2.12-5ubuntu7) ... 58s Setting up pastebinit (1.7.1-1) ... 58s Setting up grub-pc-bin (2.12-5ubuntu7) ... 58s Setting up grub-pc (2.12-5ubuntu7) ... 58s Installing for i386-pc platform. 59s Installation finished. No error reported. 59s Sourcing file `/etc/default/grub' 59s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 59s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 59s Generating grub configuration file ... 59s Found linux image: /boot/vmlinuz-6.11.0-8-generic 59s Found initrd image: /boot/initrd.img-6.11.0-8-generic 59s Warning: os-prober will not be executed to detect other bootable partitions. 59s Systems on them will not be added to the GRUB boot configuration. 59s Check GRUB_DISABLE_OS_PROBER documentation entry. 59s Adding boot menu entry for UEFI Firmware Settings ... 59s done 59s Processing triggers for libc-bin (2.40-1ubuntu3) ... 59s Processing triggers for install-info (7.1.1-1) ... 59s Processing triggers for initramfs-tools (0.142ubuntu34) ... 59s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic 59s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 68s Reading package lists... 68s Building dependency tree... 68s Reading state information... 69s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 69s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 69s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 69s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 69s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 70s Reading package lists... 70s Reading package lists... 70s Building dependency tree... 70s Reading state information... 71s Calculating upgrade... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 71s Reading package lists... 71s Building dependency tree... 71s Reading state information... 71s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 71s autopkgtest [05:48:43]: rebooting testbed after setup commands that affected boot 75s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 86s autopkgtest [05:48:58]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 86s autopkgtest [05:48:58]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-taxa 87s Get:1 http://ftpmaster.internal/ubuntu plucky/universe q2-taxa 2024.5.0+dfsg-1build1 (dsc) [2380 B] 87s Get:2 http://ftpmaster.internal/ubuntu plucky/universe q2-taxa 2024.5.0+dfsg-1build1 (tar) [234 kB] 87s Get:3 http://ftpmaster.internal/ubuntu plucky/universe q2-taxa 2024.5.0+dfsg-1build1 (diff) [7576 B] 87s gpgv: Signature made Thu Jul 11 06:38:28 2024 UTC 87s gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 87s gpgv: Can't check signature: No public key 87s dpkg-source: warning: cannot verify inline signature for ./q2-taxa_2024.5.0+dfsg-1build1.dsc: no acceptable signature found 88s autopkgtest [05:49:00]: testing package q2-taxa version 2024.5.0+dfsg-1build1 88s autopkgtest [05:49:00]: build not needed 88s autopkgtest [05:49:00]: test run-unit-test: preparing testbed 90s Note, using file '/tmp/autopkgtest.8198Uc/1-autopkgtest-satdep.dsc' to get the build dependencies 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Starting pkgProblemResolver with broken count: 0 91s Starting 2 pkgProblemResolver with broken count: 0 91s Done 91s The following NEW packages will be installed: 91s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 91s fonts-glyphicons-halflings g++ g++-14 g++-14-x86-64-linux-gnu 91s g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu 91s javascript-common libaec0 libasan8 libblas3 libcc1-0 libgcc-14-dev 91s libgfortran5 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libhwasan0 libisl23 91s libitm1 libjs-bootstrap libjs-jquery libjs-jquery-hotkeys 91s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter 91s libjs-jquery-throttle-debounce libjs-popper.js liblapack3 liblbfgsb0 91s liblsan0 liblzf1 libmpc3 libnorm1t64 libopenblas0 libopenblas0-pthread 91s libpgm-5.3-0t64 libpython3.13-minimal libpython3.13-stdlib libquadmath0 91s libsodium23 libssw0 libstdc++-14-dev libsz2 libtsan2 libubsan1 libxslt1.1 91s libyajl2 libzmq5 node-d3-color node-d3-interpolate node-d3-scale-chromatic 91s node-fortawesome-fontawesome-free node-natural-sort node-normalize.css 91s node-thenby python3-all python3-bibtexparser python3-biom-format 91s python3-click python3-colorama python3-coverage python3-dateutil 91s python3-decorator python3-dill python3-filelock python3-flask 91s python3-flask-sqlalchemy python3-flufl.lock python3-globus-sdk 91s python3-greenlet python3-h5py python3-h5py-serial python3-hdmedians 91s python3-ijson python3-iniconfig python3-itsdangerous python3-lxml 91s python3-natsort python3-networkx python3-numpy python3-packaging 91s python3-pandas python3-pandas-lib python3-parsl python3-patsy 91s python3-platformdirs python3-pluggy python3-psutil python3-public python3-py 91s python3-pytest python3-pytest-cov python3-scipy python3-setproctitle 91s python3-six python3-skbio python3-sqlalchemy python3-statsmodels 91s python3-statsmodels-lib python3-tblib python3-tomlkit python3-tz 91s python3-tzlocal python3-werkzeug python3-zmq python3.13 python3.13-minimal 91s q2-taxa q2-types q2templates qiime 91s 0 upgraded, 119 newly installed, 0 to remove and 0 not upgraded. 91s Need to get 152 MB of archives. 91s After this operation, 694 MB of additional disk space will be used. 91s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.0-2 [879 kB] 91s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.0-2 [2188 kB] 91s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 91s Get:4 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 91s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB] 91s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB] 91s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [11.9 MB] 91s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-8ubuntu1 [1030 B] 91s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 91s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 91s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-8ubuntu1 [47.6 kB] 91s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-8ubuntu1 [148 kB] 91s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-8ubuntu1 [29.1 kB] 91s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-8ubuntu1 [2998 kB] 91s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-8ubuntu1 [1317 kB] 91s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-8ubuntu1 [2732 kB] 92s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-8ubuntu1 [1177 kB] 92s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-8ubuntu1 [1634 kB] 92s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-8ubuntu1 [153 kB] 92s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-8ubuntu1 [2814 kB] 92s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [23.3 MB] 92s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-8ubuntu1 [528 kB] 92s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 92s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 92s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-8ubuntu1 [2504 kB] 92s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8ubuntu1 [13.3 MB] 92s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-8ubuntu1 [19.9 kB] 92s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 92s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 92s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 92s Get:31 http://ftpmaster.internal/ubuntu plucky/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 92s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 javascript-common all 11+nmu1 [5936 B] 92s Get:33 http://ftpmaster.internal/ubuntu plucky/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 92s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-3build2 [247 kB] 92s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-8ubuntu1 [909 kB] 92s Get:36 http://ftpmaster.internal/ubuntu plucky/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 92s Get:37 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4ubuntu3 [1280 kB] 92s Get:38 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4ubuntu3 [56.6 kB] 92s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 92s Get:40 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-metadata all 12-4 [6582 B] 92s Get:41 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 92s Get:42 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 92s Get:43 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 92s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenblas0-pthread amd64 0.3.28+ds-3 [8826 kB] 92s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-3build2 [2668 kB] 92s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 92s Get:47 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 92s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1build1 [154 kB] 92s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 libopenblas0 amd64 0.3.28+ds-3 [6240 B] 92s Get:50 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build1 [167 kB] 92s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [2107 kB] 92s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libsodium23 amd64 1.0.18-1build3 [161 kB] 92s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 libssw0 amd64 1.1-15 [22.5 kB] 92s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu1 [169 kB] 92s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 libzmq5 amd64 4.3.5-1build2 [260 kB] 92s Get:56 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-d3-color all 1.4.1+~1.4.2-1 [19.9 kB] 92s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-d3-interpolate all 1.4.0+~1.4.2-1 [24.0 kB] 92s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-d3-scale-chromatic all 1.5.0+~1.5.1-1 [23.5 kB] 92s Get:59 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-fortawesome-fontawesome-free all 6.4.2+ds1-1 [1573 kB] 92s Get:60 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-natural-sort all 1.0.0-5 [4306 B] 92s Get:61 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 92s Get:62 http://ftpmaster.internal/ubuntu plucky/universe amd64 node-thenby all 1.3.4+git20200720.0fd165a+ds-5 [5098 B] 92s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.0-2 [719 kB] 92s Get:64 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-all amd64 3.12.7-1 [890 B] 92s Get:65 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-bibtexparser all 2.0.0b5+really1.4.1-1 [34.5 kB] 92s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-11build1 [4479 kB] 92s Get:67 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py-serial amd64 3.11.0-5ubuntu1 [1107 kB] 92s Get:68 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-h5py all 3.11.0-5ubuntu1 [7974 B] 92s Get:69 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-colorama all 0.4.6-4 [32.1 kB] 92s Get:70 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-click all 8.1.7-2 [79.5 kB] 92s Get:71 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-six all 1.16.0-7 [13.1 kB] 92s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB] 92s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-tz all 2024.1-2 [31.4 kB] 92s Get:74 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas-lib amd64 2.2.3+dfsg-5 [5087 kB] 92s Get:75 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pandas all 2.2.3+dfsg-5 [3112 kB] 92s Get:76 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 92s Get:77 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.13.1-5 [18.2 MB] 92s Get:78 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-biom-format amd64 2.1.16-1 [141 kB] 92s Get:79 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-coverage amd64 7.4.4+dfsg1-0ubuntu2 [147 kB] 92s Get:80 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-dill all 0.3.9-1 [84.5 kB] 92s Get:81 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-filelock all 3.16.1-1 [12.8 kB] 92s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-itsdangerous all 2.2.0-1 [15.2 kB] 92s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-werkzeug all 3.0.4-1ubuntu1 [171 kB] 92s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-flask all 3.0.3-1ubuntu1 [83.2 kB] 92s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-greenlet amd64 3.1.0-1 [183 kB] 92s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-sqlalchemy all 2.0.32+ds1-1ubuntu2 [1206 kB] 92s Get:87 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-flask-sqlalchemy all 3.1.1-2 [30.9 kB] 92s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-psutil amd64 5.9.8-2build2 [195 kB] 92s Get:89 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-public all 4.1.0-2 [7130 B] 92s Get:90 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-flufl.lock all 8.1.0-2 [12.5 kB] 92s Get:91 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-globus-sdk all 3.47.0-1 [267 kB] 92s Get:92 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-hdmedians amd64 0.14.2-5.1build1 [124 kB] 92s Get:93 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 92s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lxml amd64 5.3.0-1 [1282 kB] 92s Get:95 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-natsort all 8.0.2-2 [33.8 kB] 92s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 92s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.1-1 [41.4 kB] 92s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-setproctitle amd64 1.3.3-1build3 [19.8 kB] 92s Get:99 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-tblib all 3.0.0-5 [12.9 kB] 92s Get:100 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-py all 1.11.0-2 [72.7 kB] 92s Get:101 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-zmq amd64 24.0.1-5build1 [286 kB] 92s Get:102 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-parsl all 2024.11.11+ds-1 [270 kB] 92s Get:103 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-patsy all 0.5.6-1 [181 kB] 92s Get:104 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-platformdirs all 4.3.6-1 [16.8 kB] 92s Get:105 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 92s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB] 92s Get:107 http://ftpmaster.internal/ubuntu plucky/universe amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 92s Get:108 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest-cov all 5.0.0-1 [21.3 kB] 92s Get:109 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-statsmodels-lib amd64 0.14.4+dfsg-1 [1783 kB] 92s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-statsmodels all 0.14.4+dfsg-1 [5010 kB] 92s Get:111 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-skbio amd64 0.6.2-3 [1407 kB] 92s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-tomlkit all 0.13.2-1 [37.6 kB] 92s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-tzlocal all 5.2-1.1 [20.5 kB] 92s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 qiime all 2024.5.0-1ubuntu2 [312 kB] 92s Get:115 http://ftpmaster.internal/ubuntu plucky/universe amd64 q2templates all 2024.5.0+ds-1 [12.0 kB] 92s Get:116 http://ftpmaster.internal/ubuntu plucky/main amd64 libyajl2 amd64 2.1.0-5build1 [20.2 kB] 92s Get:117 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-ijson amd64 3.3.0-1 [36.7 kB] 92s Get:118 http://ftpmaster.internal/ubuntu plucky/universe amd64 q2-types all 2024.5.0-1ubuntu2 [5755 kB] 92s Get:119 http://ftpmaster.internal/ubuntu plucky/universe amd64 q2-taxa all 2024.5.0+dfsg-1build1 [40.0 kB] 93s Fetched 152 MB in 1s (129 MB/s) 93s Selecting previously unselected package libpython3.13-minimal:amd64. 93s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75582 files and directories currently installed.) 93s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_amd64.deb ... 93s Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... 93s Selecting previously unselected package python3.13-minimal. 93s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_amd64.deb ... 93s Unpacking python3.13-minimal (3.13.0-2) ... 93s Selecting previously unselected package libjs-jquery. 93s Preparing to unpack .../002-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 93s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 93s Selecting previously unselected package libjs-jquery-hotkeys. 93s Preparing to unpack .../003-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 93s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 93s Selecting previously unselected package libisl23:amd64. 93s Preparing to unpack .../004-libisl23_0.27-1_amd64.deb ... 93s Unpacking libisl23:amd64 (0.27-1) ... 93s Selecting previously unselected package libmpc3:amd64. 93s Preparing to unpack .../005-libmpc3_1.3.1-1build2_amd64.deb ... 93s Unpacking libmpc3:amd64 (1.3.1-1build2) ... 93s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 93s Preparing to unpack .../006-cpp-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 93s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package cpp-14. 94s Preparing to unpack .../007-cpp-14_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package cpp-x86-64-linux-gnu. 94s Preparing to unpack .../008-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 94s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 94s Selecting previously unselected package cpp. 94s Preparing to unpack .../009-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 94s Unpacking cpp (4:14.1.0-2ubuntu1) ... 94s Selecting previously unselected package libcc1-0:amd64. 94s Preparing to unpack .../010-libcc1-0_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libcc1-0:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libgomp1:amd64. 94s Preparing to unpack .../011-libgomp1_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libgomp1:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libitm1:amd64. 94s Preparing to unpack .../012-libitm1_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libitm1:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libasan8:amd64. 94s Preparing to unpack .../013-libasan8_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libasan8:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package liblsan0:amd64. 94s Preparing to unpack .../014-liblsan0_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking liblsan0:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libtsan2:amd64. 94s Preparing to unpack .../015-libtsan2_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libtsan2:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libubsan1:amd64. 94s Preparing to unpack .../016-libubsan1_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libubsan1:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libhwasan0:amd64. 94s Preparing to unpack .../017-libhwasan0_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libhwasan0:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libquadmath0:amd64. 94s Preparing to unpack .../018-libquadmath0_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libquadmath0:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package libgcc-14-dev:amd64. 94s Preparing to unpack .../019-libgcc-14-dev_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 94s Preparing to unpack .../020-gcc-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 94s Selecting previously unselected package gcc-14. 94s Preparing to unpack .../021-gcc-14_14.2.0-8ubuntu1_amd64.deb ... 94s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package gcc-x86-64-linux-gnu. 95s Preparing to unpack .../022-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 95s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 95s Selecting previously unselected package gcc. 95s Preparing to unpack .../023-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 95s Unpacking gcc (4:14.1.0-2ubuntu1) ... 95s Selecting previously unselected package libstdc++-14-dev:amd64. 95s Preparing to unpack .../024-libstdc++-14-dev_14.2.0-8ubuntu1_amd64.deb ... 95s Unpacking libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package g++-14-x86-64-linux-gnu. 95s Preparing to unpack .../025-g++-14-x86-64-linux-gnu_14.2.0-8ubuntu1_amd64.deb ... 95s Unpacking g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package g++-14. 95s Preparing to unpack .../026-g++-14_14.2.0-8ubuntu1_amd64.deb ... 95s Unpacking g++-14 (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package g++-x86-64-linux-gnu. 95s Preparing to unpack .../027-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 95s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 95s Selecting previously unselected package g++. 95s Preparing to unpack .../028-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 95s Unpacking g++ (4:14.1.0-2ubuntu1) ... 95s Selecting previously unselected package build-essential. 95s Preparing to unpack .../029-build-essential_12.10ubuntu1_amd64.deb ... 95s Unpacking build-essential (12.10ubuntu1) ... 95s Selecting previously unselected package fonts-glyphicons-halflings. 95s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 95s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 95s Selecting previously unselected package javascript-common. 95s Preparing to unpack .../031-javascript-common_11+nmu1_all.deb ... 95s Unpacking javascript-common (11+nmu1) ... 95s Selecting previously unselected package libaec0:amd64. 95s Preparing to unpack .../032-libaec0_1.1.3-1_amd64.deb ... 95s Unpacking libaec0:amd64 (1.1.3-1) ... 95s Selecting previously unselected package libblas3:amd64. 95s Preparing to unpack .../033-libblas3_3.12.0-3build2_amd64.deb ... 95s Unpacking libblas3:amd64 (3.12.0-3build2) ... 95s Selecting previously unselected package libgfortran5:amd64. 95s Preparing to unpack .../034-libgfortran5_14.2.0-8ubuntu1_amd64.deb ... 95s Unpacking libgfortran5:amd64 (14.2.0-8ubuntu1) ... 95s Selecting previously unselected package libsz2:amd64. 95s Preparing to unpack .../035-libsz2_1.1.3-1_amd64.deb ... 95s Unpacking libsz2:amd64 (1.1.3-1) ... 95s Selecting previously unselected package libhdf5-103-1t64:amd64. 95s Preparing to unpack .../036-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_amd64.deb ... 95s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 95s Selecting previously unselected package libhdf5-hl-100t64:amd64. 95s Preparing to unpack .../037-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_amd64.deb ... 95s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 95s Selecting previously unselected package libjs-bootstrap. 95s Preparing to unpack .../038-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 95s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 95s Selecting previously unselected package libjs-jquery-metadata. 95s Preparing to unpack .../039-libjs-jquery-metadata_12-4_all.deb ... 95s Unpacking libjs-jquery-metadata (12-4) ... 95s Selecting previously unselected package libjs-jquery-tablesorter. 95s Preparing to unpack .../040-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 95s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 95s Selecting previously unselected package libjs-jquery-throttle-debounce. 95s Preparing to unpack .../041-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 95s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 95s Selecting previously unselected package libjs-popper.js. 96s Preparing to unpack .../042-libjs-popper.js_1.16.1+ds-6_all.deb ... 96s Unpacking libjs-popper.js (1.16.1+ds-6) ... 96s Selecting previously unselected package libopenblas0-pthread:amd64. 96s Preparing to unpack .../043-libopenblas0-pthread_0.3.28+ds-3_amd64.deb ... 96s Unpacking libopenblas0-pthread:amd64 (0.3.28+ds-3) ... 96s Selecting previously unselected package liblapack3:amd64. 96s Preparing to unpack .../044-liblapack3_3.12.0-3build2_amd64.deb ... 96s Unpacking liblapack3:amd64 (3.12.0-3build2) ... 96s Selecting previously unselected package liblbfgsb0:amd64. 96s Preparing to unpack .../045-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 96s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 96s Selecting previously unselected package liblzf1:amd64. 96s Preparing to unpack .../046-liblzf1_3.6-4_amd64.deb ... 96s Unpacking liblzf1:amd64 (3.6-4) ... 96s Selecting previously unselected package libnorm1t64:amd64. 96s Preparing to unpack .../047-libnorm1t64_1.5.9+dfsg-3.1build1_amd64.deb ... 96s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-3.1build1) ... 96s Selecting previously unselected package libopenblas0:amd64. 96s Preparing to unpack .../048-libopenblas0_0.3.28+ds-3_amd64.deb ... 96s Unpacking libopenblas0:amd64 (0.3.28+ds-3) ... 96s Selecting previously unselected package libpgm-5.3-0t64:amd64. 96s Preparing to unpack .../049-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_amd64.deb ... 96s Unpacking libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build1) ... 96s Selecting previously unselected package libpython3.13-stdlib:amd64. 96s Preparing to unpack .../050-libpython3.13-stdlib_3.13.0-2_amd64.deb ... 96s Unpacking libpython3.13-stdlib:amd64 (3.13.0-2) ... 96s Selecting previously unselected package libsodium23:amd64. 96s Preparing to unpack .../051-libsodium23_1.0.18-1build3_amd64.deb ... 96s Unpacking libsodium23:amd64 (1.0.18-1build3) ... 96s Selecting previously unselected package libssw0:amd64. 96s Preparing to unpack .../052-libssw0_1.1-15_amd64.deb ... 96s Unpacking libssw0:amd64 (1.1-15) ... 96s Selecting previously unselected package libxslt1.1:amd64. 96s Preparing to unpack .../053-libxslt1.1_1.1.39-0exp1ubuntu1_amd64.deb ... 96s Unpacking libxslt1.1:amd64 (1.1.39-0exp1ubuntu1) ... 96s Selecting previously unselected package libzmq5:amd64. 96s Preparing to unpack .../054-libzmq5_4.3.5-1build2_amd64.deb ... 96s Unpacking libzmq5:amd64 (4.3.5-1build2) ... 96s Selecting previously unselected package node-d3-color. 96s Preparing to unpack .../055-node-d3-color_1.4.1+~1.4.2-1_all.deb ... 96s Unpacking node-d3-color (1.4.1+~1.4.2-1) ... 96s Selecting previously unselected package node-d3-interpolate. 96s Preparing to unpack .../056-node-d3-interpolate_1.4.0+~1.4.2-1_all.deb ... 96s Unpacking node-d3-interpolate (1.4.0+~1.4.2-1) ... 96s Selecting previously unselected package node-d3-scale-chromatic. 96s Preparing to unpack .../057-node-d3-scale-chromatic_1.5.0+~1.5.1-1_all.deb ... 96s Unpacking node-d3-scale-chromatic (1.5.0+~1.5.1-1) ... 96s Selecting previously unselected package node-fortawesome-fontawesome-free. 96s Preparing to unpack .../058-node-fortawesome-fontawesome-free_6.4.2+ds1-1_all.deb ... 96s Unpacking node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 97s Selecting previously unselected package node-natural-sort. 97s Preparing to unpack .../059-node-natural-sort_1.0.0-5_all.deb ... 97s Unpacking node-natural-sort (1.0.0-5) ... 97s Selecting previously unselected package node-normalize.css. 97s Preparing to unpack .../060-node-normalize.css_8.0.1-5_all.deb ... 97s Unpacking node-normalize.css (8.0.1-5) ... 97s Selecting previously unselected package node-thenby. 97s Preparing to unpack .../061-node-thenby_1.3.4+git20200720.0fd165a+ds-5_all.deb ... 97s Unpacking node-thenby (1.3.4+git20200720.0fd165a+ds-5) ... 97s Selecting previously unselected package python3.13. 97s Preparing to unpack .../062-python3.13_3.13.0-2_amd64.deb ... 97s Unpacking python3.13 (3.13.0-2) ... 97s Selecting previously unselected package python3-all. 97s Preparing to unpack .../063-python3-all_3.12.7-1_amd64.deb ... 97s Unpacking python3-all (3.12.7-1) ... 97s Selecting previously unselected package python3-bibtexparser. 97s Preparing to unpack .../064-python3-bibtexparser_2.0.0b5+really1.4.1-1_all.deb ... 97s Unpacking python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 97s Selecting previously unselected package python3-numpy. 97s Preparing to unpack .../065-python3-numpy_1%3a1.26.4+ds-11build1_amd64.deb ... 97s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 97s Selecting previously unselected package python3-h5py-serial. 97s Preparing to unpack .../066-python3-h5py-serial_3.11.0-5ubuntu1_amd64.deb ... 97s Unpacking python3-h5py-serial (3.11.0-5ubuntu1) ... 97s Selecting previously unselected package python3-h5py. 97s Preparing to unpack .../067-python3-h5py_3.11.0-5ubuntu1_all.deb ... 97s Unpacking python3-h5py (3.11.0-5ubuntu1) ... 97s Selecting previously unselected package python3-colorama. 97s Preparing to unpack .../068-python3-colorama_0.4.6-4_all.deb ... 97s Unpacking python3-colorama (0.4.6-4) ... 97s Selecting previously unselected package python3-click. 97s Preparing to unpack .../069-python3-click_8.1.7-2_all.deb ... 97s Unpacking python3-click (8.1.7-2) ... 97s Selecting previously unselected package python3-six. 97s Preparing to unpack .../070-python3-six_1.16.0-7_all.deb ... 97s Unpacking python3-six (1.16.0-7) ... 97s Selecting previously unselected package python3-dateutil. 97s Preparing to unpack .../071-python3-dateutil_2.9.0-2_all.deb ... 97s Unpacking python3-dateutil (2.9.0-2) ... 97s Selecting previously unselected package python3-tz. 97s Preparing to unpack .../072-python3-tz_2024.1-2_all.deb ... 97s Unpacking python3-tz (2024.1-2) ... 97s Selecting previously unselected package python3-pandas-lib:amd64. 97s Preparing to unpack .../073-python3-pandas-lib_2.2.3+dfsg-5_amd64.deb ... 97s Unpacking python3-pandas-lib:amd64 (2.2.3+dfsg-5) ... 97s Selecting previously unselected package python3-pandas. 97s Preparing to unpack .../074-python3-pandas_2.2.3+dfsg-5_all.deb ... 97s Unpacking python3-pandas (2.2.3+dfsg-5) ... 98s Selecting previously unselected package python3-decorator. 98s Preparing to unpack .../075-python3-decorator_5.1.1-5_all.deb ... 98s Unpacking python3-decorator (5.1.1-5) ... 98s Selecting previously unselected package python3-scipy. 98s Preparing to unpack .../076-python3-scipy_1.13.1-5_amd64.deb ... 98s Unpacking python3-scipy (1.13.1-5) ... 98s Selecting previously unselected package python3-biom-format. 98s Preparing to unpack .../077-python3-biom-format_2.1.16-1_amd64.deb ... 98s Unpacking python3-biom-format (2.1.16-1) ... 98s Selecting previously unselected package python3-coverage. 98s Preparing to unpack .../078-python3-coverage_7.4.4+dfsg1-0ubuntu2_amd64.deb ... 98s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 98s Selecting previously unselected package python3-dill. 98s Preparing to unpack .../079-python3-dill_0.3.9-1_all.deb ... 98s Unpacking python3-dill (0.3.9-1) ... 98s Selecting previously unselected package python3-filelock. 98s Preparing to unpack .../080-python3-filelock_3.16.1-1_all.deb ... 98s Unpacking python3-filelock (3.16.1-1) ... 98s Selecting previously unselected package python3-itsdangerous. 98s Preparing to unpack .../081-python3-itsdangerous_2.2.0-1_all.deb ... 98s Unpacking python3-itsdangerous (2.2.0-1) ... 98s Selecting previously unselected package python3-werkzeug. 98s Preparing to unpack .../082-python3-werkzeug_3.0.4-1ubuntu1_all.deb ... 98s Unpacking python3-werkzeug (3.0.4-1ubuntu1) ... 98s Selecting previously unselected package python3-flask. 98s Preparing to unpack .../083-python3-flask_3.0.3-1ubuntu1_all.deb ... 98s Unpacking python3-flask (3.0.3-1ubuntu1) ... 98s Selecting previously unselected package python3-greenlet. 98s Preparing to unpack .../084-python3-greenlet_3.1.0-1_amd64.deb ... 98s Unpacking python3-greenlet (3.1.0-1) ... 99s Selecting previously unselected package python3-sqlalchemy. 99s Preparing to unpack .../085-python3-sqlalchemy_2.0.32+ds1-1ubuntu2_all.deb ... 99s Unpacking python3-sqlalchemy (2.0.32+ds1-1ubuntu2) ... 99s Selecting previously unselected package python3-flask-sqlalchemy. 99s Preparing to unpack .../086-python3-flask-sqlalchemy_3.1.1-2_all.deb ... 99s Unpacking python3-flask-sqlalchemy (3.1.1-2) ... 99s Selecting previously unselected package python3-psutil. 99s Preparing to unpack .../087-python3-psutil_5.9.8-2build2_amd64.deb ... 99s Unpacking python3-psutil (5.9.8-2build2) ... 99s Selecting previously unselected package python3-public. 99s Preparing to unpack .../088-python3-public_4.1.0-2_all.deb ... 99s Unpacking python3-public (4.1.0-2) ... 99s Selecting previously unselected package python3-flufl.lock. 99s Preparing to unpack .../089-python3-flufl.lock_8.1.0-2_all.deb ... 99s Unpacking python3-flufl.lock (8.1.0-2) ... 99s Selecting previously unselected package python3-globus-sdk. 99s Preparing to unpack .../090-python3-globus-sdk_3.47.0-1_all.deb ... 99s Unpacking python3-globus-sdk (3.47.0-1) ... 99s Selecting previously unselected package python3-hdmedians. 99s Preparing to unpack .../091-python3-hdmedians_0.14.2-5.1build1_amd64.deb ... 99s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 99s Selecting previously unselected package python3-iniconfig. 99s Preparing to unpack .../092-python3-iniconfig_1.1.1-2_all.deb ... 99s Unpacking python3-iniconfig (1.1.1-2) ... 99s Selecting previously unselected package python3-lxml:amd64. 99s Preparing to unpack .../093-python3-lxml_5.3.0-1_amd64.deb ... 99s Unpacking python3-lxml:amd64 (5.3.0-1) ... 99s Selecting previously unselected package python3-natsort. 99s Preparing to unpack .../094-python3-natsort_8.0.2-2_all.deb ... 99s Unpacking python3-natsort (8.0.2-2) ... 99s Selecting previously unselected package python3-networkx. 99s Preparing to unpack .../095-python3-networkx_3.2.1-4ubuntu1_all.deb ... 99s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 100s Selecting previously unselected package python3-packaging. 100s Preparing to unpack .../096-python3-packaging_24.1-1_all.deb ... 100s Unpacking python3-packaging (24.1-1) ... 100s Selecting previously unselected package python3-setproctitle:amd64. 100s Preparing to unpack .../097-python3-setproctitle_1.3.3-1build3_amd64.deb ... 100s Unpacking python3-setproctitle:amd64 (1.3.3-1build3) ... 100s Selecting previously unselected package python3-tblib. 100s Preparing to unpack .../098-python3-tblib_3.0.0-5_all.deb ... 100s Unpacking python3-tblib (3.0.0-5) ... 100s Selecting previously unselected package python3-py. 100s Preparing to unpack .../099-python3-py_1.11.0-2_all.deb ... 100s Unpacking python3-py (1.11.0-2) ... 100s Selecting previously unselected package python3-zmq. 100s Preparing to unpack .../100-python3-zmq_24.0.1-5build1_amd64.deb ... 100s Unpacking python3-zmq (24.0.1-5build1) ... 100s Selecting previously unselected package python3-parsl. 100s Preparing to unpack .../101-python3-parsl_2024.11.11+ds-1_all.deb ... 100s Unpacking python3-parsl (2024.11.11+ds-1) ... 100s Selecting previously unselected package python3-patsy. 100s Preparing to unpack .../102-python3-patsy_0.5.6-1_all.deb ... 100s Unpacking python3-patsy (0.5.6-1) ... 100s Selecting previously unselected package python3-platformdirs. 100s Preparing to unpack .../103-python3-platformdirs_4.3.6-1_all.deb ... 100s Unpacking python3-platformdirs (4.3.6-1) ... 100s Selecting previously unselected package python3-pluggy. 100s Preparing to unpack .../104-python3-pluggy_1.5.0-1_all.deb ... 100s Unpacking python3-pluggy (1.5.0-1) ... 100s Selecting previously unselected package python3-pytest. 100s Preparing to unpack .../105-python3-pytest_8.3.3-1_all.deb ... 100s Unpacking python3-pytest (8.3.3-1) ... 100s Selecting previously unselected package libjs-jquery-isonscreen. 100s Preparing to unpack .../106-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 100s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 100s Selecting previously unselected package python3-pytest-cov. 100s Preparing to unpack .../107-python3-pytest-cov_5.0.0-1_all.deb ... 100s Unpacking python3-pytest-cov (5.0.0-1) ... 100s Selecting previously unselected package python3-statsmodels-lib:amd64. 100s Preparing to unpack .../108-python3-statsmodels-lib_0.14.4+dfsg-1_amd64.deb ... 100s Unpacking python3-statsmodels-lib:amd64 (0.14.4+dfsg-1) ... 100s Selecting previously unselected package python3-statsmodels. 100s Preparing to unpack .../109-python3-statsmodels_0.14.4+dfsg-1_all.deb ... 100s Unpacking python3-statsmodels (0.14.4+dfsg-1) ... 100s Selecting previously unselected package python3-skbio. 100s Preparing to unpack .../110-python3-skbio_0.6.2-3_amd64.deb ... 100s Unpacking python3-skbio (0.6.2-3) ... 101s Selecting previously unselected package python3-tomlkit. 101s Preparing to unpack .../111-python3-tomlkit_0.13.2-1_all.deb ... 101s Unpacking python3-tomlkit (0.13.2-1) ... 101s Selecting previously unselected package python3-tzlocal. 101s Preparing to unpack .../112-python3-tzlocal_5.2-1.1_all.deb ... 101s Unpacking python3-tzlocal (5.2-1.1) ... 101s Selecting previously unselected package qiime. 101s Preparing to unpack .../113-qiime_2024.5.0-1ubuntu2_all.deb ... 101s Unpacking qiime (2024.5.0-1ubuntu2) ... 101s Selecting previously unselected package q2templates. 101s Preparing to unpack .../114-q2templates_2024.5.0+ds-1_all.deb ... 101s Unpacking q2templates (2024.5.0+ds-1) ... 101s Selecting previously unselected package libyajl2:amd64. 101s Preparing to unpack .../115-libyajl2_2.1.0-5build1_amd64.deb ... 101s Unpacking libyajl2:amd64 (2.1.0-5build1) ... 101s Selecting previously unselected package python3-ijson. 101s Preparing to unpack .../116-python3-ijson_3.3.0-1_amd64.deb ... 101s Unpacking python3-ijson (3.3.0-1) ... 101s Selecting previously unselected package q2-types. 101s Preparing to unpack .../117-q2-types_2024.5.0-1ubuntu2_all.deb ... 101s Unpacking q2-types (2024.5.0-1ubuntu2) ... 101s Selecting previously unselected package q2-taxa. 101s Preparing to unpack .../118-q2-taxa_2024.5.0+dfsg-1build1_all.deb ... 101s Unpacking q2-taxa (2024.5.0+dfsg-1build1) ... 101s Setting up javascript-common (11+nmu1) ... 101s Setting up python3-iniconfig (1.1.1-2) ... 101s Setting up libnorm1t64:amd64 (1.5.9+dfsg-3.1build1) ... 101s Setting up node-d3-color (1.4.1+~1.4.2-1) ... 101s Setting up python3-filelock (3.16.1-1) ... 102s Setting up node-d3-interpolate (1.4.0+~1.4.2-1) ... 102s Setting up libsodium23:amd64 (1.0.18-1build3) ... 102s Setting up python3-tblib (3.0.0-5) ... 102s Setting up python3-py (1.11.0-2) ... 102s Setting up node-natural-sort (1.0.0-5) ... 102s Setting up libjs-popper.js (1.16.1+ds-6) ... 102s Setting up python3-colorama (0.4.6-4) ... 102s Setting up python3-public (4.1.0-2) ... 102s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 102s Setting up node-d3-scale-chromatic (1.5.0+~1.5.1-1) ... 102s Setting up libyajl2:amd64 (2.1.0-5build1) ... 102s Setting up python3-itsdangerous (2.2.0-1) ... 102s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 103s Setting up node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 103s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 103s Setting up libgomp1:amd64 (14.2.0-8ubuntu1) ... 103s Setting up python3-click (8.1.7-2) ... 103s Setting up python3-networkx (3.2.1-4ubuntu1) ... 105s Setting up libaec0:amd64 (1.1.3-1) ... 105s Setting up python3-platformdirs (4.3.6-1) ... 105s Setting up python3-psutil (5.9.8-2build2) ... 106s Setting up python3-tz (2024.1-2) ... 106s Setting up python3-natsort (8.0.2-2) ... 106s Setting up python3-flufl.lock (8.1.0-2) ... 106s Setting up python3-six (1.16.0-7) ... 107s Setting up libpython3.13-minimal:amd64 (3.13.0-2) ... 107s Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build1) ... 107s Setting up python3-decorator (5.1.1-5) ... 107s Setting up libblas3:amd64 (3.12.0-3build2) ... 107s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 107s Setting up python3-packaging (24.1-1) ... 107s Setting up python3-dill (0.3.9-1) ... 107s Setting up liblzf1:amd64 (3.6-4) ... 107s Setting up python3-greenlet (3.1.0-1) ... 108s Setting up libquadmath0:amd64 (14.2.0-8ubuntu1) ... 108s Setting up libmpc3:amd64 (1.3.1-1build2) ... 108s Setting up python3-setproctitle:amd64 (1.3.3-1build3) ... 108s Setting up libgfortran5:amd64 (14.2.0-8ubuntu1) ... 108s Setting up python3-pluggy (1.5.0-1) ... 108s Setting up libubsan1:amd64 (14.2.0-8ubuntu1) ... 108s Setting up libhwasan0:amd64 (14.2.0-8ubuntu1) ... 108s Setting up libasan8:amd64 (14.2.0-8ubuntu1) ... 108s Setting up libxslt1.1:amd64 (1.1.39-0exp1ubuntu1) ... 108s Setting up python3.13-minimal (3.13.0-2) ... 109s Setting up python3-dateutil (2.9.0-2) ... 109s Setting up python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 109s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 109s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 109s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 109s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 109s Setting up libtsan2:amd64 (14.2.0-8ubuntu1) ... 109s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 109s Setting up python3-tzlocal (5.2-1.1) ... 109s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 109s Setting up libisl23:amd64 (0.27-1) ... 109s Setting up python3-tomlkit (0.13.2-1) ... 110s Setting up node-normalize.css (8.0.1-5) ... 110s Setting up libpython3.13-stdlib:amd64 (3.13.0-2) ... 110s Setting up libssw0:amd64 (1.1-15) ... 110s Setting up libcc1-0:amd64 (14.2.0-8ubuntu1) ... 110s Setting up node-thenby (1.3.4+git20200720.0fd165a+ds-5) ... 110s Setting up liblsan0:amd64 (14.2.0-8ubuntu1) ... 110s Setting up python3-globus-sdk (3.47.0-1) ... 110s Setting up libsz2:amd64 (1.1.3-1) ... 110s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 110s Setting up libitm1:amd64 (14.2.0-8ubuntu1) ... 110s Setting up liblapack3:amd64 (3.12.0-3build2) ... 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 110s Setting up libopenblas0-pthread:amd64 (0.3.28+ds-3) ... 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode 110s Setting up libzmq5:amd64 (4.3.5-1build2) ... 110s Setting up python3-ijson (3.3.0-1) ... 110s Setting up python3.13 (3.13.0-2) ... 111s Setting up python3-pytest (8.3.3-1) ... 112s Setting up python3-all (3.12.7-1) ... 112s Setting up python3-sqlalchemy (2.0.32+ds1-1ubuntu2) ... 114s Setting up python3-werkzeug (3.0.4-1ubuntu1) ... 114s Setting up python3-zmq (24.0.1-5build1) ... 115s Setting up libjs-jquery-metadata (12-4) ... 115s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 115s Setting up cpp-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 115s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 118s Setting up cpp-14 (14.2.0-8ubuntu1) ... 118s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 118s Setting up python3-hdmedians (0.14.2-5.1build1) ... 118s Setting up libopenblas0:amd64 (0.3.28+ds-3) ... 118s Setting up python3-lxml:amd64 (5.3.0-1) ... 118s Setting up libgcc-14-dev:amd64 (14.2.0-8ubuntu1) ... 118s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4ubuntu3) ... 118s Setting up libstdc++-14-dev:amd64 (14.2.0-8ubuntu1) ... 118s Setting up python3-statsmodels-lib:amd64 (0.14.4+dfsg-1) ... 118s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 118s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 118s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4ubuntu3) ... 118s Setting up python3-scipy (1.13.1-5) ... 124s Setting up python3-flask (3.0.3-1ubuntu1) ... 125s Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5) ... 125s Setting up python3-h5py-serial (3.11.0-5ubuntu1) ... 125s Setting up python3-pytest-cov (5.0.0-1) ... 125s Setting up python3-patsy (0.5.6-1) ... 126s Setting up python3-pandas (2.2.3+dfsg-5) ... 134s Setting up python3-h5py (3.11.0-5ubuntu1) ... 134s Setting up python3-statsmodels (0.14.4+dfsg-1) ... 139s Setting up cpp (4:14.1.0-2ubuntu1) ... 139s Setting up gcc-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 139s Setting up python3-flask-sqlalchemy (3.1.1-2) ... 139s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 139s Setting up q2templates (2024.5.0+ds-1) ... 140s Setting up python3-parsl (2024.11.11+ds-1) ... 140s Setting up gcc-14 (14.2.0-8ubuntu1) ... 140s Setting up qiime (2024.5.0-1ubuntu2) ... 141s Setting up python3-biom-format (2.1.16-1) ... 141s Setting up python3-skbio (0.6.2-3) ... 143s Setting up q2-types (2024.5.0-1ubuntu2) ... 143s Setting up g++-14-x86-64-linux-gnu (14.2.0-8ubuntu1) ... 143s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 143s Setting up g++-14 (14.2.0-8ubuntu1) ... 143s Setting up q2-taxa (2024.5.0+dfsg-1build1) ... 143s Setting up gcc (4:14.1.0-2ubuntu1) ... 143s Setting up g++ (4:14.1.0-2ubuntu1) ... 143s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 143s Setting up build-essential (12.10ubuntu1) ... 143s Processing triggers for systemd (256.5-2ubuntu4) ... 143s Processing triggers for man-db (2.13.0-1) ... 144s Processing triggers for libc-bin (2.40-1ubuntu3) ... 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s Starting pkgProblemResolver with broken count: 0 145s Starting 2 pkgProblemResolver with broken count: 0 145s Done 146s The following NEW packages will be installed: 146s autopkgtest-satdep 146s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 146s Need to get 0 B/700 B of archives. 146s After this operation, 0 B of additional disk space will be used. 146s Get:1 /tmp/autopkgtest.8198Uc/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B] 146s Selecting previously unselected package autopkgtest-satdep. 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 93921 files and directories currently installed.) 146s Preparing to unpack .../2-autopkgtest-satdep.deb ... 146s Unpacking autopkgtest-satdep (0) ... 146s Setting up autopkgtest-satdep (0) ... 147s (Reading database ... 93921 files and directories currently installed.) 147s Removing autopkgtest-satdep (0) ... 151s autopkgtest [05:50:03]: test run-unit-test: [----------------------- 152s ============================= test session starts ============================== 152s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 152s cachedir: .pytest_cache 152s rootdir: /tmp/autopkgtest.8198Uc/autopkgtest_tmp 152s plugins: cov-5.0.0, typeguard-4.4.1 152s collecting ... collected 0 items / 3 errors 152s 152s ==================================== ERRORS ==================================== 152s ________________ ERROR collecting q2_taxa/tests/test_methods.py ________________ 152s ImportError while importing test module '/tmp/autopkgtest.8198Uc/autopkgtest_tmp/q2_taxa/tests/test_methods.py'. 152s Hint: make sure your test modules/packages have valid Python names. 152s Traceback: 152s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 152s return _bootstrap._gcd_import(name[level:], package, level) 152s q2_taxa/__init__.py:9: in 152s from ._method import collapse, filter_table, filter_seqs 152s q2_taxa/_method.py:9: in 152s import pandas as pd 152s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 152s raise ImportError( 152s E ImportError: Unable to import required dependencies: 152s E numpy: Error importing numpy: you should not try to import numpy from 152s E its source directory; please exit the numpy source tree, and relaunch 152s E your python interpreter from there. 152s _____________ ERROR collecting q2_taxa/tests/test_plugin_setup.py ______________ 152s ImportError while importing test module '/tmp/autopkgtest.8198Uc/autopkgtest_tmp/q2_taxa/tests/test_plugin_setup.py'. 152s Hint: make sure your test modules/packages have valid Python names. 152s Traceback: 152s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 152s return _bootstrap._gcd_import(name[level:], package, level) 152s q2_taxa/__init__.py:9: in 152s from ._method import collapse, filter_table, filter_seqs 152s q2_taxa/_method.py:9: in 152s import pandas as pd 152s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 152s raise ImportError( 152s E ImportError: Unable to import required dependencies: 152s E numpy: Error importing numpy: you should not try to import numpy from 152s E its source directory; please exit the numpy source tree, and relaunch 152s E your python interpreter from there. 152s ______________ ERROR collecting q2_taxa/tests/test_visualizer.py _______________ 152s ImportError while importing test module '/tmp/autopkgtest.8198Uc/autopkgtest_tmp/q2_taxa/tests/test_visualizer.py'. 152s Hint: make sure your test modules/packages have valid Python names. 152s Traceback: 152s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 152s return _bootstrap._gcd_import(name[level:], package, level) 152s q2_taxa/__init__.py:9: in 152s from ._method import collapse, filter_table, filter_seqs 152s q2_taxa/_method.py:9: in 152s import pandas as pd 152s /usr/lib/python3/dist-packages/pandas/__init__.py:19: in 152s raise ImportError( 152s E ImportError: Unable to import required dependencies: 152s E numpy: Error importing numpy: you should not try to import numpy from 152s E its source directory; please exit the numpy source tree, and relaunch 152s E your python interpreter from there. 152s 152s ---------- coverage: platform linux, python 3.13.0-final-0 ----------- 152s Name Stmts Miss Cover 152s -------------------------------------------------------- 152s q2_taxa/__init__.py 6 5 17% 152s q2_taxa/_examples.py 14 14 0% 152s q2_taxa/_method.py 54 53 2% 152s q2_taxa/_util.py 27 27 0% 152s q2_taxa/_version.py 4 4 0% 152s q2_taxa/_visualizer.py 51 51 0% 152s q2_taxa/plugin_setup.py 12 12 0% 152s q2_taxa/tests/__init__.py 0 0 100% 152s q2_taxa/tests/test_methods.py 436 436 0% 152s q2_taxa/tests/test_plugin_setup.py 7 7 0% 152s q2_taxa/tests/test_visualizer.py 61 61 0% 152s -------------------------------------------------------- 152s TOTAL 672 670 1% 152s 152s =========================== short test summary info ============================ 152s ERROR q2_taxa/tests/test_methods.py 152s ERROR q2_taxa/tests/test_plugin_setup.py 152s ERROR q2_taxa/tests/test_visualizer.py 152s !!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!! 152s ============================== 3 errors in 0.39s =============================== 152s autopkgtest [05:50:04]: test run-unit-test: -----------------------] 152s autopkgtest [05:50:04]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 152s run-unit-test FAIL non-zero exit status 2 153s autopkgtest [05:50:05]: @@@@@@@@@@@@@@@@@@@@ summary 153s run-unit-test FAIL non-zero exit status 2 169s nova [W] Skipping flock for amd64 169s Creating nova instance adt-plucky-i386-q2-taxa-20241115-054732-juju-7f2275-prod-proposed-migration-environment-20-55c5431b-fef5-4acc-a31a-a28b41fa5a35 from image adt/ubuntu-plucky-amd64-server-20241114.img (UUID 86f72d39-d3f4-462e-8625-4ce3a06b44aa)...