0s autopkgtest [02:02:17]: starting date and time: 2025-01-07 02:02:17+0000 0s autopkgtest [02:02:17]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [02:02:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nw1scgrk/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade python-cai --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.13.1-1~exp2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-16.secgroup --name adt-plucky-i386-python-cai-20250107-020217-juju-7f2275-prod-proposed-migration-environment-2-558af252-746e-4843-9cff-33d38134717f --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 97s autopkgtest [02:03:54]: testbed dpkg architecture: amd64 97s autopkgtest [02:03:54]: testbed apt version: 2.9.18 98s autopkgtest [02:03:55]: @@@@@@@@@@@@@@@@@@@@ test bed setup 98s autopkgtest [02:03:55]: testbed release detected to be: None 99s autopkgtest [02:03:56]: updating testbed package index (apt update) 99s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 100s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 100s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 100s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 100s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [112 kB] 100s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [16.5 kB] 100s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [9708 B] 100s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [756 kB] 100s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [132 kB] 100s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [209 kB] 100s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [40.1 kB] 100s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/restricted i386 Packages [2408 B] 100s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [890 kB] 100s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [346 kB] 100s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [23.4 kB] 100s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [3704 B] 100s Fetched 2613 kB in 1s (2429 kB/s) 101s Reading package lists... 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Calculating upgrade... 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 102s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s 0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded. 103s autopkgtest [02:04:00]: upgrading testbed (apt dist-upgrade and autopurge) 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 104s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 104s Starting 2 pkgProblemResolver with broken count: 0 104s Done 104s Entering ResolveByKeep 104s 104s The following packages were automatically installed and are no longer required: 104s python3.12 python3.12-minimal 104s Use 'sudo apt autoremove' to remove them. 104s The following NEW packages will be installed: 104s libpython3.13-minimal libpython3.13-stdlib python3.13 python3.13-minimal 104s The following packages will be upgraded: 104s libpython3-stdlib python3 python3-minimal 105s 3 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 105s Need to get 6118 kB of archives. 105s After this operation, 22.7 MB of additional disk space will be used. 105s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-minimal amd64 3.13.1-2 [881 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13-minimal amd64 3.13.1-2 [2358 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3-minimal amd64 3.13.1-1~exp2 [27.6 kB] 105s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 python3 amd64 3.13.1-1~exp2 [23.9 kB] 105s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [2088 kB] 105s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.13 amd64 3.13.1-2 [729 kB] 105s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 libpython3-stdlib amd64 3.13.1-1~exp2 [10.2 kB] 106s Fetched 6118 kB in 1s (7933 kB/s) 106s Selecting previously unselected package libpython3.13-minimal:amd64. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 75804 files and directories currently installed.) 106s Preparing to unpack .../libpython3.13-minimal_3.13.1-2_amd64.deb ... 106s Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... 106s Selecting previously unselected package python3.13-minimal. 106s Preparing to unpack .../python3.13-minimal_3.13.1-2_amd64.deb ... 106s Unpacking python3.13-minimal (3.13.1-2) ... 106s Setting up libpython3.13-minimal:amd64 (3.13.1-2) ... 106s Setting up python3.13-minimal (3.13.1-2) ... 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76124 files and directories currently installed.) 107s Preparing to unpack .../python3-minimal_3.13.1-1~exp2_amd64.deb ... 107s Unpacking python3-minimal (3.13.1-1~exp2) over (3.12.8-1) ... 107s Setting up python3-minimal (3.13.1-1~exp2) ... 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76124 files and directories currently installed.) 107s Preparing to unpack .../python3_3.13.1-1~exp2_amd64.deb ... 107s Unpacking python3 (3.13.1-1~exp2) over (3.12.8-1) ... 107s Selecting previously unselected package libpython3.13-stdlib:amd64. 107s Preparing to unpack .../libpython3.13-stdlib_3.13.1-2_amd64.deb ... 107s Unpacking libpython3.13-stdlib:amd64 (3.13.1-2) ... 107s Selecting previously unselected package python3.13. 107s Preparing to unpack .../python3.13_3.13.1-2_amd64.deb ... 107s Unpacking python3.13 (3.13.1-2) ... 107s Preparing to unpack .../libpython3-stdlib_3.13.1-1~exp2_amd64.deb ... 107s Unpacking libpython3-stdlib:amd64 (3.13.1-1~exp2) over (3.12.8-1) ... 107s Setting up libpython3.13-stdlib:amd64 (3.13.1-2) ... 107s Setting up libpython3-stdlib:amd64 (3.13.1-1~exp2) ... 107s Setting up python3.13 (3.13.1-2) ... 108s Setting up python3 (3.13.1-1~exp2) ... 108s /usr/bin/py3clean:101: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead. 108s for fn in glob1(directory, "%s.*" % fname): 108s Processing triggers for man-db (2.13.0-1) ... 109s Processing triggers for systemd (257-2ubuntu1) ... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s Starting pkgProblemResolver with broken count: 0 110s Starting 2 pkgProblemResolver with broken count: 0 110s Done 110s The following packages will be REMOVED: 110s python3.12* python3.12-minimal* 110s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 110s After this operation, 8926 kB disk space will be freed. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76541 files and directories currently installed.) 110s Removing python3.12 (3.12.8-3) ... 110s Removing python3.12-minimal (3.12.8-3) ... 111s /usr/bin/py3clean:125: DeprecationWarning: glob.glob1 is deprecated and will be removed in Python 3.15. Use glob.glob and pass a directory to its root_dir argument instead. 111s for fn in glob1(directory, "%s.%s.py[co]" % (fname, magic_tag)): 111s Processing triggers for man-db (2.13.0-1) ... 111s Processing triggers for systemd (257-2ubuntu1) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76513 files and directories currently installed.) 111s Purging configuration files for python3.12-minimal (3.12.8-3) ... 114s autopkgtest [02:04:11]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024 114s autopkgtest [02:04:11]: @@@@@@@@@@@@@@@@@@@@ apt-source python-cai 117s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (dsc) [2421 B] 117s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (tar) [1379 kB] 117s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-cai 1.0.2-5 (diff) [3852 B] 117s gpgv: Signature made Thu Dec 26 14:52:26 2024 UTC 117s gpgv: using RSA key AC0A4FF12611B6FCCF01C111393587D97D86500B 117s gpgv: Can't check signature: No public key 117s dpkg-source: warning: cannot verify inline signature for ./python-cai_1.0.2-5.dsc: no acceptable signature found 117s autopkgtest [02:04:14]: testing package python-cai version 1.0.2-5 117s autopkgtest [02:04:14]: build not needed 118s autopkgtest [02:04:15]: test command1: preparing testbed 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 119s Starting pkgProblemResolver with broken count: 0 119s Starting 2 pkgProblemResolver with broken count: 0 119s Done 119s The following NEW packages will be installed: 119s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 119s libblas3 libcairo2 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 119s libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 119s libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 119s liblcms2-2 liblerc4 libopenjp2-7 libpixman-1-0 libraqm0 libsharpyuv0 119s libtiff6 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 119s libxrender1 python-cai-doc python3-biopython python3-cai python3-cairo 119s python3-click python3-colorama python3-decorator python3-freetype 119s python3-iniconfig python3-numpy python3-packaging python3-pil python3-pluggy 119s python3-pytest python3-reportlab python3-rlpycairo python3-scipy sgml-base 119s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 120s 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded. 120s Need to get 53.5 MB of archives. 120s After this operation, 230 MB of additional disk space will be used. 120s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 sgml-base all 1.31 [11.4 kB] 120s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 120s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 120s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontenc1 amd64 1:1.1.8-1build1 [14.0 kB] 120s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 120s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 120s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 xfonts-utils amd64 1:7.7+7 [97.1 kB] 120s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 fonts-urw-base35 all 20200910-8 [11.0 MB] 121s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 fontconfig-config amd64 2.15.0-1.1ubuntu2 [37.3 kB] 121s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libblas3 amd64 3.12.0-4 [332 kB] 121s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libfontconfig1 amd64 2.15.0-1.1ubuntu2 [139 kB] 121s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 121s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 121s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 121s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 121s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libcairo2 amd64 1.18.2-2 [569 kB] 121s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB] 121s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libgfortran5 amd64 14.2.0-12ubuntu1 [909 kB] 121s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-12ubuntu1 [148 kB] 121s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 121s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libharfbuzz0b amd64 10.1.0-1 [541 kB] 121s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 121s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 121s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 121s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 121s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 121s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libjs-sphinxdoc all 8.1.3-3 [30.9 kB] 121s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 liblapack3 amd64 3.12.0-4 [3177 kB] 122s Get:29 http://ftpmaster.internal/ubuntu plucky/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 122s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 122s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 122s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 libraqm0 amd64 0.10.2-1 [17.2 kB] 122s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [17.5 kB] 122s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 122s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebp7 amd64 1.4.0-0.1 [231 kB] 122s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libtiff6 amd64 4.5.1+git230720-4ubuntu4 [200 kB] 122s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 122s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 122s Get:39 http://ftpmaster.internal/ubuntu plucky/universe amd64 python-cai-doc all 1.0.2-5 [26.0 kB] 122s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [5319 kB] 122s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libopenjp2-7 amd64 2.5.0-2ubuntu2 [217 kB] 122s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-pil amd64 10.4.0-1ubuntu2 [580 kB] 122s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-cairo amd64 1.26.1-2build1 [143 kB] 122s Get:44 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-freetype all 2.5.1-1 [92.3 kB] 122s Get:45 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-rlpycairo all 0.3.0-3 [9130 B] 122s Get:46 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-reportlab all 4.2.5-1 [1107 kB] 122s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 xml-core all 0.19 [20.3 kB] 122s Get:48 http://ftpmaster.internal/ubuntu plucky/universe amd64 w3c-sgml-lib all 1.3-3 [280 kB] 122s Get:49 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-biopython amd64 1.84+dfsg-4build1 [1719 kB] 122s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-colorama all 0.4.6-4 [32.1 kB] 122s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-click all 8.1.7-2 [79.5 kB] 122s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 122s Get:53 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-scipy amd64 1.14.1-3ubuntu1 [22.3 MB] 123s Get:54 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-cai all 1.0.2-5 [8434 B] 123s Get:55 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 123s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-packaging all 24.2-1 [51.5 kB] 123s Get:57 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 123s Get:58 http://ftpmaster.internal/ubuntu plucky/universe amd64 python3-pytest all 8.3.3-1 [251 kB] 123s Fetched 53.5 MB in 4s (15.1 MB/s) 123s Selecting previously unselected package sgml-base. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 76513 files and directories currently installed.) 123s Preparing to unpack .../00-sgml-base_1.31_all.deb ... 123s Unpacking sgml-base (1.31) ... 123s Selecting previously unselected package fonts-dejavu-mono. 123s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 123s Unpacking fonts-dejavu-mono (2.37-8) ... 123s Selecting previously unselected package fonts-dejavu-core. 123s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 123s Unpacking fonts-dejavu-core (2.37-8) ... 123s Selecting previously unselected package libfontenc1:amd64. 123s Preparing to unpack .../03-libfontenc1_1%3a1.1.8-1build1_amd64.deb ... 123s Unpacking libfontenc1:amd64 (1:1.1.8-1build1) ... 123s Selecting previously unselected package x11-common. 123s Preparing to unpack .../04-x11-common_1%3a7.7+23ubuntu3_all.deb ... 123s Unpacking x11-common (1:7.7+23ubuntu3) ... 123s Selecting previously unselected package xfonts-encodings. 123s Preparing to unpack .../05-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 123s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 123s Selecting previously unselected package xfonts-utils. 123s Preparing to unpack .../06-xfonts-utils_1%3a7.7+7_amd64.deb ... 123s Unpacking xfonts-utils (1:7.7+7) ... 123s Selecting previously unselected package fonts-urw-base35. 123s Preparing to unpack .../07-fonts-urw-base35_20200910-8_all.deb ... 123s Unpacking fonts-urw-base35 (20200910-8) ... 124s Selecting previously unselected package fontconfig-config. 124s Preparing to unpack .../08-fontconfig-config_2.15.0-1.1ubuntu2_amd64.deb ... 124s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 124s Selecting previously unselected package libblas3:amd64. 124s Preparing to unpack .../09-libblas3_3.12.0-4_amd64.deb ... 124s Unpacking libblas3:amd64 (3.12.0-4) ... 124s Selecting previously unselected package libfontconfig1:amd64. 124s Preparing to unpack .../10-libfontconfig1_2.15.0-1.1ubuntu2_amd64.deb ... 124s Unpacking libfontconfig1:amd64 (2.15.0-1.1ubuntu2) ... 124s Selecting previously unselected package libpixman-1-0:amd64. 124s Preparing to unpack .../11-libpixman-1-0_0.44.0-3_amd64.deb ... 124s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 124s Selecting previously unselected package libxcb-render0:amd64. 124s Preparing to unpack .../12-libxcb-render0_1.17.0-2_amd64.deb ... 124s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 124s Selecting previously unselected package libxcb-shm0:amd64. 124s 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(2.1-6.1ubuntu2) ... 128s Setting up python3-decorator (5.1.1-5) ... 128s Setting up libfontenc1:amd64 (1:1.1.8-1build1) ... 128s Setting up libblas3:amd64 (3.12.0-4) ... 128s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 128s Setting up python3-packaging (24.2-1) ... 128s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 128s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 128s Setting up fonts-dejavu-mono (2.37-8) ... 128s Setting up fonts-dejavu-core (2.37-8) ... 128s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 128s Setting up libgfortran5:amd64 (14.2.0-12ubuntu1) ... 128s Setting up python3-pluggy (1.5.0-1) ... 128s Setting up libwebp7:amd64 (1.4.0-0.1) ... 128s Setting up libopenjp2-7:amd64 (2.5.0-2ubuntu2) ... 128s Setting up libharfbuzz0b:amd64 (10.1.0-1) ... 128s Setting up sgml-base (1.31) ... 128s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) 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... 132s Setting up python-cai-doc (1.0.2-5) ... 132s Setting up fonts-urw-base35 (20200910-8) ... 133s Setting up libcairo2:amd64 (1.18.2-2) ... 133s Setting up python3-pil:amd64 (10.4.0-1ubuntu2) ... 133s Setting up python3-cairo (1.26.1-2build1) ... 133s Setting up python3-rlpycairo (0.3.0-3) ... 133s Setting up python3-reportlab (4.2.5-1) ... 134s Processing triggers for libc-bin (2.40-4ubuntu1) ... 134s Processing triggers for man-db (2.13.0-1) ... 135s Processing triggers for sgml-base (1.31) ... 135s Setting up w3c-sgml-lib (1.3-3) ... 160s Setting up python3-biopython (1.84+dfsg-4build1) ... 161s Setting up python3-cai (1.0.2-5) ... 163s autopkgtest [02:05:00]: testbed environment configured for cross-architecture building 163s autopkgtest [02:05:00]: test command1: pytest-3 163s autopkgtest [02:05:00]: test command1: [----------------------- 164s ============================= test session starts ============================== 164s platform linux -- Python 3.13.1, pytest-8.3.3, pluggy-1.5.0 164s rootdir: /tmp/autopkgtest.i4LjNE/build.Bci/src 164s plugins: typeguard-4.4.1 164s collected 15 items 164s 164s tests/test_cai.py ..... [ 33%] 164s tests/test_relative_adaptiveness.py .... [ 60%] 164s tests/test_rscu.py ...... [100%] 164s 164s =============================== warnings summary =============================== 164s tests/test_cai.py::test_only_non_synonymous 164s /usr/lib/python3/dist-packages/CAI/CAI.py:213: SmallSampleWarning: One or more sample arguments is too small; all returned values will be NaN. See documentation for sample size requirements. 164s return float(gmean(sequence_weights)) 164s 164s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 164s ======================== 15 passed, 1 warning in 0.42s ========================= 164s autopkgtest [02:05:01]: test command1: -----------------------] 165s autopkgtest [02:05:02]: test command1: - - - - - - - - - - results - - - - - - - - - - 165s command1 PASS 165s autopkgtest [02:05:02]: @@@@@@@@@@@@@@@@@@@@ summary 165s command1 PASS 194s nova [W] Skipping flock for amd64 194s Creating nova instance adt-plucky-i386-python-cai-20250107-020217-juju-7f2275-prod-proposed-migration-environment-2-558af252-746e-4843-9cff-33d38134717f from image adt/ubuntu-plucky-amd64-server-20250106.img (UUID f13b4a28-cf2d-4f39-940b-bc25a6090b60)... 194s nova [W] Timed out waiting for 74374215-1964-4870-ae94-ca491bf4f667 to get deleted.