0s autopkgtest [15:06:45]: starting date and time: 2024-11-09 15:06:45+0000
  0s autopkgtest [15:06:45]: git checkout: 0acbae0a WIP show VirtSubproc stderr in real-time
  0s autopkgtest [15:06:45]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ntiatb92/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:htslib --apt-upgrade nim-hts --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=htslib/1.20+ds-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-3.secgroup --name adt-plucky-i386-nim-hts-20241109-150645-juju-7f2275-prod-proposed-migration-environment-2-40286a29-7292-4e46-86e0-c6fa07806784 --image adt/ubuntu-plucky-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
728s autopkgtest [15:18:53]: testbed dpkg architecture: amd64
728s autopkgtest [15:18:53]: testbed apt version: 2.9.8
728s autopkgtest [15:18:53]: test architecture: i386
728s autopkgtest [15:18:53]: @@@@@@@@@@@@@@@@@@@@ test bed setup
729s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
730s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
730s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [104 kB]
730s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1004 kB]
731s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.3 kB]
731s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main amd64 Packages [156 kB]
732s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main i386 Packages [106 kB]
732s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/restricted amd64 Packages [32.6 kB]
732s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [751 kB]
733s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [329 kB]
734s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse i386 Packages [13.0 kB]
734s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse amd64 Packages [37.7 kB]
734s Fetched 2630 kB in 5s (574 kB/s)
734s Reading package lists...
736s Reading package lists...
736s Building dependency tree...
736s Reading state information...
736s Calculating upgrade...
737s The following NEW packages will be installed:
737s   systemd-cryptsetup
737s The following packages will be upgraded:
737s   base-passwd bash-completion libattr1 libbpf1 libbsd0 libbytesize-common
737s   libbytesize1 libdrm-common libdrm2 libjson-glib-1.0-0
737s   libjson-glib-1.0-common libmaxminddb0 libmnl0 libnghttp2-14 libnspr4
737s   libnss-systemd libpam-systemd libpython3.12-minimal libpython3.12-stdlib
737s   libpython3.12t64 libsystemd-shared libsystemd0 libudev1 libudisks2-0
737s   liburcu8t64 linux-firmware openssh-client openssh-server openssh-sftp-server
737s   pci.ids python3-gi python3-idna python3-jsonpatch python3-lazr.restfulclient
737s   python3-urllib3 python3-wadllib python3.12 python3.12-gdbm
737s   python3.12-minimal systemd systemd-resolved systemd-sysv systemd-timesyncd
737s   udev udisks2 usbutils
737s 46 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
737s Need to get 558 MB of archives.
737s After this operation, 29.4 MB of additional disk space will be used.
737s Get:1 http://ftpmaster.internal/ubuntu plucky/main amd64 base-passwd amd64 3.6.5 [53.4 kB]
737s Get:2 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12t64 amd64 3.12.7-2 [2372 kB]
741s Get:3 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12 amd64 3.12.7-2 [661 kB]
742s Get:4 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [2079 kB]
745s Get:5 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-minimal amd64 3.12.7-2 [2345 kB]
749s Get:6 http://ftpmaster.internal/ubuntu plucky/main amd64 libpython3.12-minimal amd64 3.12.7-2 [836 kB]
750s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libnss-systemd amd64 256.5-2ubuntu4 [191 kB]
750s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-timesyncd amd64 256.5-2ubuntu4 [40.8 kB]
750s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-resolved amd64 256.5-2ubuntu4 [339 kB]
751s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd-shared amd64 256.5-2ubuntu4 [2289 kB]
754s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 libsystemd0 amd64 256.5-2ubuntu4 [511 kB]
755s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-sysv amd64 256.5-2ubuntu4 [11.9 kB]
755s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libpam-systemd amd64 256.5-2ubuntu4 [288 kB]
755s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd amd64 256.5-2ubuntu4 [3587 kB]
761s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 udev amd64 256.5-2ubuntu4 [2081 kB]
764s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libudev1 amd64 256.5-2ubuntu4 [209 kB]
764s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-sftp-server amd64 1:9.7p1-7ubuntu5 [40.8 kB]
764s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-server amd64 1:9.7p1-7ubuntu5 [583 kB]
765s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 openssh-client amd64 1:9.7p1-7ubuntu5 [1027 kB]
767s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libattr1 amd64 1:2.5.2-2 [12.1 kB]
767s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libbsd0 amd64 0.12.2-2 [49.9 kB]
767s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libbpf1 amd64 1:1.4.6-1 [184 kB]
767s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 libmnl0 amd64 1.0.5-3 [12.6 kB]
767s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-gi amd64 3.50.0-3 [250 kB]
768s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 bash-completion all 1:2.14.0-2 [210 kB]
768s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm-common all 2.4.123-1 [8436 B]
768s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libdrm2 amd64 2.4.123-1 [43.7 kB]
768s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 libmaxminddb0 amd64 1.11.0-1 [19.9 kB]
768s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-14 amd64 1.64.0-1 [80.7 kB]
768s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 liburcu8t64 amd64 0.14.1-1 [68.6 kB]
768s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 pci.ids all 0.0~2024.10.24-1 [279 kB]
769s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 python3.12-gdbm amd64 3.12.7-2 [30.4 kB]
769s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 usbutils amd64 1:018-1 [84.5 kB]
769s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize1 amd64 2.11-1ubuntu1 [14.0 kB]
769s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 libbytesize-common all 2.11-1ubuntu1 [3584 B]
769s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-common all 1.10.0+ds-2 [5502 B]
769s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 libjson-glib-1.0-0 amd64 1.10.0+ds-2 [72.8 kB]
769s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libnspr4 amd64 2:4.35-1.1ubuntu2 [118 kB]
769s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 udisks2 amd64 2.10.1-11ubuntu1 [326 kB]
770s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libudisks2-0 amd64 2.10.1-11ubuntu1 [176 kB]
770s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-firmware amd64 20241108.git3bbb13a7-0ubuntu1 [536 MB]
1402s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-idna all 3.8-2 [47.0 kB]
1402s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-jsonpatch all 1.32-4 [12.2 kB]
1402s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-wadllib all 2.0.0-1 [36.7 kB]
1403s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-lazr.restfulclient all 0.14.6-2 [50.9 kB]
1403s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 python3-urllib3 all 2.0.7-2ubuntu0.1 [93.1 kB]
1403s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 systemd-cryptsetup amd64 256.5-2ubuntu4 [120 kB]
1403s Preconfiguring packages ...
1403s Fetched 558 MB in 11min 7s (837 kB/s)
1404s (Reading database ... 
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(Reading database ... 75312 files and directories currently installed.)
1404s Preparing to unpack .../base-passwd_3.6.5_amd64.deb ...
1404s Unpacking base-passwd (3.6.5) over (3.6.4) ...
1404s Setting up base-passwd (3.6.5) ...
1404s (Reading database ... 
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1404s Preparing to unpack .../0-libpython3.12t64_3.12.7-2_amd64.deb ...
1404s Unpacking libpython3.12t64:amd64 (3.12.7-2) over (3.12.7-1) ...
1404s Preparing to unpack .../1-python3.12_3.12.7-2_amd64.deb ...
1404s Unpacking python3.12 (3.12.7-2) over (3.12.7-1) ...
1404s Preparing to unpack .../2-libpython3.12-stdlib_3.12.7-2_amd64.deb ...
1404s Unpacking libpython3.12-stdlib:amd64 (3.12.7-2) over (3.12.7-1) ...
1404s Preparing to unpack .../3-python3.12-minimal_3.12.7-2_amd64.deb ...
1404s Unpacking python3.12-minimal (3.12.7-2) over (3.12.7-1) ...
1404s Preparing to unpack .../4-libpython3.12-minimal_3.12.7-2_amd64.deb ...
1404s Unpacking libpython3.12-minimal:amd64 (3.12.7-2) over (3.12.7-1) ...
1404s Preparing to unpack .../5-libnss-systemd_256.5-2ubuntu4_amd64.deb ...
1404s Unpacking libnss-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1404s Preparing to unpack .../6-systemd-timesyncd_256.5-2ubuntu4_amd64.deb ...
1404s Unpacking systemd-timesyncd (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1404s Preparing to unpack .../7-systemd-resolved_256.5-2ubuntu4_amd64.deb ...
1404s Unpacking systemd-resolved (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1404s Preparing to unpack .../8-libsystemd-shared_256.5-2ubuntu4_amd64.deb ...
1404s Unpacking libsystemd-shared:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Preparing to unpack .../9-libsystemd0_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking libsystemd0:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Setting up libsystemd0:amd64 (256.5-2ubuntu4) ...
1405s (Reading database ... 
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1405s Preparing to unpack .../systemd-sysv_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking systemd-sysv (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Preparing to unpack .../libpam-systemd_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking libpam-systemd:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Preparing to unpack .../systemd_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking systemd (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Preparing to unpack .../udev_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking udev (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Preparing to unpack .../libudev1_256.5-2ubuntu4_amd64.deb ...
1405s Unpacking libudev1:amd64 (256.5-2ubuntu4) over (256.5-2ubuntu3) ...
1405s Setting up libudev1:amd64 (256.5-2ubuntu4) ...
1405s (Reading database ... 
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(Reading database ... 75313 files and directories currently installed.)
1405s Preparing to unpack .../openssh-sftp-server_1%3a9.7p1-7ubuntu5_amd64.deb ...
1405s Unpacking openssh-sftp-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ...
1405s Preparing to unpack .../openssh-server_1%3a9.7p1-7ubuntu5_amd64.deb ...
1405s Unpacking openssh-server (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ...
1405s Preparing to unpack .../openssh-client_1%3a9.7p1-7ubuntu5_amd64.deb ...
1405s Unpacking openssh-client (1:9.7p1-7ubuntu5) over (1:9.7p1-7ubuntu4) ...
1405s Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ...
1405s Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.2-1build2) ...
1405s Setting up libattr1:amd64 (1:2.5.2-2) ...
1405s (Reading database ... 
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1405s Preparing to unpack .../libbsd0_0.12.2-2_amd64.deb ...
1405s Unpacking libbsd0:amd64 (0.12.2-2) over (0.12.2-1) ...
1405s Setting up libbsd0:amd64 (0.12.2-2) ...
1405s (Reading database ... 
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(Reading database ... 75313 files and directories currently installed.)
1405s Preparing to unpack .../00-libbpf1_1%3a1.4.6-1_amd64.deb ...
1405s Unpacking libbpf1:amd64 (1:1.4.6-1) over (1:1.4.5-1) ...
1405s Preparing to unpack .../01-libmnl0_1.0.5-3_amd64.deb ...
1405s Unpacking libmnl0:amd64 (1.0.5-3) over (1.0.5-2build1) ...
1406s Preparing to unpack .../02-python3-gi_3.50.0-3_amd64.deb ...
1406s Unpacking python3-gi (3.50.0-3) over (3.48.2-1) ...
1406s Preparing to unpack .../03-bash-completion_1%3a2.14.0-2_all.deb ...
1406s Unpacking bash-completion (1:2.14.0-2) over (1:2.14.0-1) ...
1406s Preparing to unpack .../04-libdrm-common_2.4.123-1_all.deb ...
1406s Unpacking libdrm-common (2.4.123-1) over (2.4.122-1) ...
1406s Preparing to unpack .../05-libdrm2_2.4.123-1_amd64.deb ...
1406s Unpacking libdrm2:amd64 (2.4.123-1) over (2.4.122-1) ...
1406s Preparing to unpack .../06-libmaxminddb0_1.11.0-1_amd64.deb ...
1406s Unpacking libmaxminddb0:amd64 (1.11.0-1) over (1.10.0-1) ...
1406s Preparing to unpack .../07-libnghttp2-14_1.64.0-1_amd64.deb ...
1406s Unpacking libnghttp2-14:amd64 (1.64.0-1) over (1.62.1-2) ...
1406s Preparing to unpack .../08-liburcu8t64_0.14.1-1_amd64.deb ...
1406s Unpacking liburcu8t64:amd64 (0.14.1-1) over (0.14.0-4) ...
1406s Preparing to unpack .../09-pci.ids_0.0~2024.10.24-1_all.deb ...
1406s Unpacking pci.ids (0.0~2024.10.24-1) over (0.0~2024.09.12-1) ...
1406s Preparing to unpack .../10-python3.12-gdbm_3.12.7-2_amd64.deb ...
1406s Unpacking python3.12-gdbm (3.12.7-2) over (3.12.7-1) ...
1406s Preparing to unpack .../11-usbutils_1%3a018-1_amd64.deb ...
1406s Unpacking usbutils (1:018-1) over (1:017-3build1) ...
1406s Preparing to unpack .../12-libbytesize1_2.11-1ubuntu1_amd64.deb ...
1406s Unpacking libbytesize1:amd64 (2.11-1ubuntu1) over (2.10-1ubuntu2) ...
1406s Preparing to unpack .../13-libbytesize-common_2.11-1ubuntu1_all.deb ...
1406s Unpacking libbytesize-common (2.11-1ubuntu1) over (2.10-1ubuntu2) ...
1406s Preparing to unpack .../14-libjson-glib-1.0-common_1.10.0+ds-2_all.deb ...
1406s Unpacking libjson-glib-1.0-common (1.10.0+ds-2) over (1.8.0-2build2) ...
1406s Preparing to unpack .../15-libjson-glib-1.0-0_1.10.0+ds-2_amd64.deb ...
1406s Unpacking libjson-glib-1.0-0:amd64 (1.10.0+ds-2) over (1.8.0-2build2) ...
1406s Preparing to unpack .../16-libnspr4_2%3a4.35-1.1ubuntu2_amd64.deb ...
1406s Unpacking libnspr4:amd64 (2:4.35-1.1ubuntu2) over (2:4.35-1.1ubuntu1) ...
1406s Preparing to unpack .../17-udisks2_2.10.1-11ubuntu1_amd64.deb ...
1406s Unpacking udisks2 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ...
1406s Preparing to unpack .../18-libudisks2-0_2.10.1-11ubuntu1_amd64.deb ...
1406s Unpacking libudisks2-0:amd64 (2.10.1-11ubuntu1) over (2.10.1-9ubuntu2) ...
1406s Preparing to unpack .../19-linux-firmware_20241108.git3bbb13a7-0ubuntu1_amd64.deb ...
1406s Unpacking linux-firmware (20241108.git3bbb13a7-0ubuntu1) over (20240913.gita34e7a5f-0ubuntu2) ...
1409s Preparing to unpack .../20-python3-idna_3.8-2_all.deb ...
1409s Unpacking python3-idna (3.8-2) over (3.6-2.1) ...
1409s Preparing to unpack .../21-python3-jsonpatch_1.32-4_all.deb ...
1409s Unpacking python3-jsonpatch (1.32-4) over (1.32-3) ...
1409s Preparing to unpack .../22-python3-wadllib_2.0.0-1_all.deb ...
1409s Unpacking python3-wadllib (2.0.0-1) over (1.3.6-5) ...
1409s Preparing to unpack .../23-python3-lazr.restfulclient_0.14.6-2_all.deb ...
1409s Unpacking python3-lazr.restfulclient (0.14.6-2) over (0.14.6-1) ...
1409s Preparing to unpack .../24-python3-urllib3_2.0.7-2ubuntu0.1_all.deb ...
1409s Unpacking python3-urllib3 (2.0.7-2ubuntu0.1) over (2.0.7-2) ...
1409s Selecting previously unselected package systemd-cryptsetup.
1409s Preparing to unpack .../25-systemd-cryptsetup_256.5-2ubuntu4_amd64.deb ...
1409s Unpacking systemd-cryptsetup (256.5-2ubuntu4) ...
1409s Setting up liburcu8t64:amd64 (0.14.1-1) ...
1409s Setting up pci.ids (0.0~2024.10.24-1) ...
1409s Setting up linux-firmware (20241108.git3bbb13a7-0ubuntu1) ...
1409s Setting up openssh-client (1:9.7p1-7ubuntu5) ...
1409s Setting up libmaxminddb0:amd64 (1.11.0-1) ...
1409s Setting up python3.12-gdbm (3.12.7-2) ...
1409s Setting up python3-jsonpatch (1.32-4) ...
1409s Setting up libpython3.12-minimal:amd64 (3.12.7-2) ...
1409s Setting up libnghttp2-14:amd64 (1.64.0-1) ...
1409s Setting up usbutils (1:018-1) ...
1409s Setting up libnspr4:amd64 (2:4.35-1.1ubuntu2) ...
1409s Setting up bash-completion (1:2.14.0-2) ...
1409s Setting up python3-wadllib (2.0.0-1) ...
1409s Setting up python3-gi (3.50.0-3) ...
1410s Setting up libbytesize-common (2.11-1ubuntu1) ...
1410s Setting up libmnl0:amd64 (1.0.5-3) ...
1410s Setting up python3-idna (3.8-2) ...
1410s Setting up libsystemd-shared:amd64 (256.5-2ubuntu4) ...
1410s Setting up python3-urllib3 (2.0.7-2ubuntu0.1) ...
1410s Setting up libjson-glib-1.0-common (1.10.0+ds-2) ...
1410s Setting up libbytesize1:amd64 (2.11-1ubuntu1) ...
1410s Setting up python3-lazr.restfulclient (0.14.6-2) ...
1410s Setting up libdrm-common (2.4.123-1) ...
1410s Setting up libbpf1:amd64 (1:1.4.6-1) ...
1410s Setting up libudisks2-0:amd64 (2.10.1-11ubuntu1) ...
1410s Setting up python3.12-minimal (3.12.7-2) ...
1411s Setting up openssh-sftp-server (1:9.7p1-7ubuntu5) ...
1411s Setting up libpython3.12-stdlib:amd64 (3.12.7-2) ...
1411s Setting up openssh-server (1:9.7p1-7ubuntu5) ...
1412s Setting up python3.12 (3.12.7-2) ...
1412s Setting up systemd (256.5-2ubuntu4) ...
1412s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring.

1412s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'.

1413s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring.

1413s Setting up libjson-glib-1.0-0:amd64 (1.10.0+ds-2) ...
1413s Setting up libpython3.12t64:amd64 (3.12.7-2) ...
1413s Setting up systemd-cryptsetup (256.5-2ubuntu4) ...
1413s Setting up systemd-timesyncd (256.5-2ubuntu4) ...
1414s systemd-time-wait-sync.service is a disabled or a static unit not running, not starting it.
1414s Setting up udev (256.5-2ubuntu4) ...
1414s Setting up libdrm2:amd64 (2.4.123-1) ...
1414s Setting up systemd-resolved (256.5-2ubuntu4) ...
1415s Setting up udisks2 (2.10.1-11ubuntu1) ...
1415s Setting up systemd-sysv (256.5-2ubuntu4) ...
1415s Setting up libnss-systemd:amd64 (256.5-2ubuntu4) ...
1415s Setting up libpam-systemd:amd64 (256.5-2ubuntu4) ...
1415s Processing triggers for libc-bin (2.40-1ubuntu3) ...
1415s Processing triggers for ufw (0.36.2-8) ...
1415s Processing triggers for man-db (2.12.1-3) ...
1416s Processing triggers for dbus (1.14.10-4ubuntu5) ...
1416s Processing triggers for shared-mime-info (2.4-5) ...
1417s Processing triggers for initramfs-tools (0.142ubuntu34) ...
1417s update-initramfs: Generating /boot/initrd.img-6.11.0-8-generic
1417s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
1425s Reading package lists...
1425s Building dependency tree...
1425s Reading state information...
1425s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1426s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
1426s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [213 kB]
1426s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
1426s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
1426s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [998 kB]
1427s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 Packages [748 kB]
1428s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe i386 Packages [327 kB]
1429s Get:8 http://ftpmaster.internal/ubuntu plucky/universe Sources [20.7 MB]
1462s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 Packages [1429 kB]
1465s Get:10 http://ftpmaster.internal/ubuntu plucky/universe i386 Packages [8334 kB]
1486s Get:11 http://ftpmaster.internal/ubuntu plucky/universe amd64 Packages [15.8 MB]
1524s Fetched 48.6 MB in 1min 38s (494 kB/s)
1525s Reading package lists...
1525s Reading package lists...
1525s Building dependency tree...
1525s Reading state information...
1525s Calculating upgrade...
1525s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1525s Reading package lists...
1525s Building dependency tree...
1525s Reading state information...
1525s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1526s autopkgtest [15:32:11]: rebooting testbed after setup commands that affected boot
1542s autopkgtest [15:32:27]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 16 13:41:20 UTC 2024
1545s autopkgtest [15:32:30]: @@@@@@@@@@@@@@@@@@@@ apt-source nim-hts
1548s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nim-hts 0.3.19+ds-1ubuntu2 (dsc) [2308 B]
1548s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nim-hts 0.3.19+ds-1ubuntu2 (tar) [527 kB]
1548s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nim-hts 0.3.19+ds-1ubuntu2 (diff) [341 kB]
1548s gpgv: Signature made Sun Apr 14 17:35:40 2024 UTC
1548s gpgv:                using RSA key AC0A4FF12611B6FCCF01C111393587D97D86500B
1548s gpgv: Can't check signature: No public key
1548s dpkg-source: warning: cannot verify inline signature for ./nim-hts_0.3.19+ds-1ubuntu2.dsc: no acceptable signature found
1548s autopkgtest [15:32:33]: testing package nim-hts version 0.3.19+ds-1ubuntu2
1549s autopkgtest [15:32:34]: build not needed
1549s autopkgtest [15:32:34]: test run-unit-test: preparing testbed
1551s Note, using file '/tmp/autopkgtest.19BS1H/1-autopkgtest-satdep.dsc' to get the build dependencies
1552s Reading package lists...
1552s Building dependency tree...
1552s Reading state information...
1552s Starting pkgProblemResolver with broken count: 0
1552s Starting 2 pkgProblemResolver with broken count: 0
1552s Done
1552s The following NEW packages will be installed:
1552s   binutils-i686-linux-gnu build-essential cpp cpp-14 cpp-14-i686-linux-gnu
1552s   cpp-14-x86-64-linux-gnu cpp-i686-linux-gnu cpp-x86-64-linux-gnu cross-config
1552s   crossbuild-essential-i386 dpkg-cross g++ g++-14 g++-14-i686-linux-gnu
1552s   g++-14-x86-64-linux-gnu g++-i686-linux-gnu g++-x86-64-linux-gnu gcc
1552s   gcc-12-base:i386 gcc-14 gcc-14-base:i386 gcc-14-cross-base
1552s   gcc-14-i686-linux-gnu gcc-14-i686-linux-gnu-base gcc-14-x86-64-linux-gnu
1552s   gcc-i686-linux-gnu gcc-x86-64-linux-gnu libasan8 libasan8:i386
1552s   libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli-dev
1552s   libbz2-dev libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross
1552s   libcc1-0 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386
1552s   libcrypt1:i386 libcurl4-gnutls-dev libdebian-dpkgcross-perl libdeflate-dev
1552s   libdeflate0 libevent-2.1-7t64 libfile-homedir-perl libfile-which-perl
1552s   libgcc-12-dev:i386 libgcc-14-dev libgcc-14-dev-i386-cross libgcc-s1:i386
1552s   libgcc-s1-i386-cross libgmp-dev libgmpxx4ldbl libgnutls-dane0t64
1552s   libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgomp1:i386
1552s   libgomp1-i386-cross libhts-dev libhts3t64 libhtscodecs2 libhwasan0
1552s   libidn2-dev libio-string-perl libisl23 libitm1 libitm1:i386
1552s   libitm1-i386-cross liblsan0 liblzma-dev libmpc3 libnghttp2-dev
1552s   libp11-kit-dev libpcre3 libpkgconf3 libpsl-dev libquadmath0
1552s   libquadmath0:i386 libquadmath0-i386-cross librtmp-dev libssh2-1-dev
1552s   libssl-dev libstdc++-12-dev:i386 libstdc++-14-dev
1552s   libstdc++-14-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross
1552s   libtasn1-6-dev libtsan2 libubsan1 libubsan1:i386 libubsan1-i386-cross
1552s   libunbound8 libxml-libxml-perl libxml-namespacesupport-perl
1552s   libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libyaml-perl
1552s   libzstd-dev linux-libc-dev:i386 linux-libc-dev-i386-cross nettle-dev nim
1552s   nim-hts-dev nim-hts-examples pkgconf pkgconf-bin zlib1g-dev
1552s 0 upgraded, 114 newly installed, 0 to remove and 0 not upgraded.
1552s Need to get 175 MB of archives.
1552s After this operation, 617 MB of additional disk space will be used.
1552s Get:1 http://ftpmaster.internal/ubuntu plucky/main i386 gcc-14-base i386 14.2.0-7ubuntu1 [51.2 kB]
1553s Get:2 http://ftpmaster.internal/ubuntu plucky/main i386 libgcc-s1 i386 14.2.0-7ubuntu1 [95.4 kB]
1553s Get:3 http://ftpmaster.internal/ubuntu plucky/main i386 libc6 i386 2.40-1ubuntu3 [3034 kB]
1558s Get:4 http://ftpmaster.internal/ubuntu plucky/main i386 libcrypt1 i386 1:4.4.36-4build1 [91.9 kB]
1558s Get:5 http://ftpmaster.internal/ubuntu plucky/main i386 libatomic1 i386 14.2.0-7ubuntu1 [8368 B]
1558s Get:6 http://ftpmaster.internal/ubuntu plucky/main i386 libstdc++6 i386 14.2.0-7ubuntu1 [859 kB]
1560s Get:7 http://ftpmaster.internal/ubuntu plucky/main amd64 libisl23 amd64 0.27-1 [685 kB]
1561s Get:8 http://ftpmaster.internal/ubuntu plucky/main amd64 libmpc3 amd64 1.3.1-1build2 [55.3 kB]
1561s Get:9 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [11.9 MB]
1581s Get:10 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14 amd64 14.2.0-7ubuntu1 [1026 B]
1581s Get:11 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B]
1581s Get:12 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB]
1581s Get:13 http://ftpmaster.internal/ubuntu plucky/main amd64 libcc1-0 amd64 14.2.0-7ubuntu1 [47.6 kB]
1581s Get:14 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1 amd64 14.2.0-7ubuntu1 [148 kB]
1582s Get:15 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1 amd64 14.2.0-7ubuntu1 [29.1 kB]
1582s Get:16 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8 amd64 14.2.0-7ubuntu1 [2998 kB]
1587s Get:17 http://ftpmaster.internal/ubuntu plucky/main amd64 liblsan0 amd64 14.2.0-7ubuntu1 [1316 kB]
1589s Get:18 http://ftpmaster.internal/ubuntu plucky/main amd64 libtsan2 amd64 14.2.0-7ubuntu1 [2733 kB]
1593s Get:19 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1 amd64 14.2.0-7ubuntu1 [1177 kB]
1595s Get:20 http://ftpmaster.internal/ubuntu plucky/main amd64 libhwasan0 amd64 14.2.0-7ubuntu1 [1634 kB]
1598s Get:21 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0 amd64 14.2.0-7ubuntu1 [153 kB]
1598s Get:22 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev amd64 14.2.0-7ubuntu1 [2814 kB]
1602s Get:23 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [23.4 MB]
1643s Get:24 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14 amd64 14.2.0-7ubuntu1 [526 kB]
1644s Get:25 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B]
1644s Get:26 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B]
1644s Get:27 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev amd64 14.2.0-7ubuntu1 [2503 kB]
1648s Get:28 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-7ubuntu1 [13.4 MB]
1671s Get:29 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14 amd64 14.2.0-7ubuntu1 [19.8 kB]
1671s Get:30 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B]
1671s Get:31 http://ftpmaster.internal/ubuntu plucky/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B]
1671s Get:32 http://ftpmaster.internal/ubuntu plucky/main amd64 build-essential amd64 12.10ubuntu1 [4928 B]
1671s Get:33 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-i686-linux-gnu-base amd64 14.2.0-4ubuntu2cross1 [51.0 kB]
1672s Get:34 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-14-i686-linux-gnu amd64 14.2.0-4ubuntu2cross1 [12.6 MB]
1692s Get:35 http://ftpmaster.internal/ubuntu plucky/main amd64 cpp-i686-linux-gnu amd64 4:14.1.0-2ubuntu1 [5448 B]
1692s Get:36 http://ftpmaster.internal/ubuntu plucky/main amd64 binutils-i686-linux-gnu amd64 2.43.1-4ubuntu1 [2967 kB]
1697s Get:37 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-cross-base all 14.2.0-4ubuntu2cross1 [45.9 kB]
1697s Get:38 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-i386-cross all 2.40-1ubuntu3cross1 [1524 kB]
1700s Get:39 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-s1-i386-cross all 14.2.0-4ubuntu2cross1 [95.4 kB]
1700s Get:40 http://ftpmaster.internal/ubuntu plucky/main amd64 libgomp1-i386-cross all 14.2.0-4ubuntu2cross1 [149 kB]
1700s Get:41 http://ftpmaster.internal/ubuntu plucky/main amd64 libitm1-i386-cross all 14.2.0-4ubuntu2cross1 [30.2 kB]
1700s Get:42 http://ftpmaster.internal/ubuntu plucky/main amd64 libatomic1-i386-cross all 14.2.0-4ubuntu2cross1 [8108 B]
1701s Get:43 http://ftpmaster.internal/ubuntu plucky/main amd64 libasan8-i386-cross all 14.2.0-4ubuntu2cross1 [2855 kB]
1705s Get:44 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++6-i386-cross all 14.2.0-4ubuntu2cross1 [811 kB]
1707s Get:45 http://ftpmaster.internal/ubuntu plucky/main amd64 libubsan1-i386-cross all 14.2.0-4ubuntu2cross1 [1143 kB]
1709s Get:46 http://ftpmaster.internal/ubuntu plucky/main amd64 libquadmath0-i386-cross all 14.2.0-4ubuntu2cross1 [247 kB]
1709s Get:47 http://ftpmaster.internal/ubuntu plucky/main amd64 libgcc-14-dev-i386-cross all 14.2.0-4ubuntu2cross1 [2720 kB]
1713s Get:48 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-14-i686-linux-gnu amd64 14.2.0-4ubuntu2cross1 [24.7 MB]
1756s Get:49 http://ftpmaster.internal/ubuntu plucky/main amd64 gcc-i686-linux-gnu amd64 4:14.1.0-2ubuntu1 [1208 B]
1756s Get:50 http://ftpmaster.internal/ubuntu plucky/main amd64 linux-libc-dev-i386-cross all 6.11.0-7.7cross1 [1433 kB]
1759s Get:51 http://ftpmaster.internal/ubuntu plucky/main amd64 libc6-dev-i386-cross all 2.40-1ubuntu3cross1 [1919 kB]
1762s Get:52 http://ftpmaster.internal/ubuntu plucky/main amd64 libstdc++-14-dev-i386-cross all 14.2.0-4ubuntu2cross1 [2583 kB]
1766s Get:53 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-14-i686-linux-gnu amd64 14.2.0-4ubuntu2cross1 [14.1 MB]
1789s Get:54 http://ftpmaster.internal/ubuntu plucky/main amd64 g++-i686-linux-gnu amd64 4:14.1.0-2ubuntu1 [956 B]
1789s Get:55 http://ftpmaster.internal/ubuntu plucky/main amd64 libconfig-inifiles-perl all 3.000003-3 [38.4 kB]
1789s Get:56 http://ftpmaster.internal/ubuntu plucky/main amd64 libio-string-perl all 1.08-4 [11.1 kB]
1789s Get:57 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml-namespacesupport-perl all 1.12-2 [13.5 kB]
1789s Get:58 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml-sax-base-perl all 1.09-3 [18.9 kB]
1789s Get:59 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml-sax-perl all 1.02+dfsg-3 [57.0 kB]
1789s Get:60 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5 [304 kB]
1789s Get:61 http://ftpmaster.internal/ubuntu plucky/main amd64 libxml-simple-perl all 2.25-2 [64.1 kB]
1789s Get:62 http://ftpmaster.internal/ubuntu plucky/main amd64 libyaml-perl all 1.31-1 [65.7 kB]
1790s Get:63 http://ftpmaster.internal/ubuntu plucky/main amd64 libconfig-auto-perl all 0.44-2 [17.1 kB]
1790s Get:64 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-which-perl all 1.27-2 [12.5 kB]
1790s Get:65 http://ftpmaster.internal/ubuntu plucky/main amd64 libfile-homedir-perl all 1.006-2 [37.0 kB]
1790s Get:66 http://ftpmaster.internal/ubuntu plucky/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.6 kB]
1790s Get:67 http://ftpmaster.internal/ubuntu plucky/main amd64 cross-config all 2.6.20 [16.5 kB]
1790s Get:68 http://ftpmaster.internal/ubuntu plucky/main amd64 dpkg-cross all 2.6.20 [22.2 kB]
1790s Get:69 http://ftpmaster.internal/ubuntu plucky/universe amd64 crossbuild-essential-i386 all 12.10ubuntu1 [3870 B]
1790s Get:70 http://ftpmaster.internal/ubuntu plucky/universe i386 gcc-12-base i386 12.4.0-2ubuntu1 [46.6 kB]
1790s Get:71 http://ftpmaster.internal/ubuntu plucky/main i386 libasan8 i386 14.2.0-7ubuntu1 [2865 kB]
1794s Get:72 http://ftpmaster.internal/ubuntu plucky/main amd64 libbrotli-dev amd64 1.1.0-2build2 [353 kB]
1795s Get:73 http://ftpmaster.internal/ubuntu plucky/main amd64 libbz2-dev amd64 1.0.8-6 [33.8 kB]
1795s Get:74 http://ftpmaster.internal/ubuntu plucky/main i386 linux-libc-dev i386 6.11.0-8.8 [1667 kB]
1798s Get:75 http://ftpmaster.internal/ubuntu plucky/main i386 libcrypt-dev i386 1:4.4.36-4build1 [121 kB]
1799s Get:76 http://ftpmaster.internal/ubuntu plucky/main i386 libc6-dev i386 2.40-1ubuntu3 [1881 kB]
1802s Get:77 http://ftpmaster.internal/ubuntu plucky/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10 [144 kB]
1802s Get:78 http://ftpmaster.internal/ubuntu plucky/main amd64 libunbound8 amd64 1.20.0-1ubuntu2.1 [447 kB]
1803s Get:79 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-dane0t64 amd64 3.8.6-2ubuntu1 [24.0 kB]
1803s Get:80 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls-openssl27t64 amd64 3.8.6-2ubuntu1 [24.2 kB]
1803s Get:81 http://ftpmaster.internal/ubuntu plucky/main amd64 libidn2-dev amd64 2.3.7-2build2 [120 kB]
1803s Get:82 http://ftpmaster.internal/ubuntu plucky/main amd64 libp11-kit-dev amd64 0.25.5-2ubuntu1 [22.7 kB]
1803s Get:83 http://ftpmaster.internal/ubuntu plucky/main amd64 libtasn1-6-dev amd64 4.19.0-3build1 [90.5 kB]
1803s Get:84 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2ubuntu7 [10.0 kB]
1803s Get:85 http://ftpmaster.internal/ubuntu plucky/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2ubuntu7 [341 kB]
1803s Get:86 http://ftpmaster.internal/ubuntu plucky/main amd64 nettle-dev amd64 3.10-1 [1172 kB]
1805s Get:87 http://ftpmaster.internal/ubuntu plucky/main amd64 libgnutls28-dev amd64 3.8.6-2ubuntu1 [1069 kB]
1807s Get:88 http://ftpmaster.internal/ubuntu plucky/main amd64 libpkgconf3 amd64 1.8.1-4 [32.3 kB]
1807s Get:89 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf-bin amd64 1.8.1-4 [21.6 kB]
1807s Get:90 http://ftpmaster.internal/ubuntu plucky/main amd64 pkgconf amd64 1.8.1-4 [16.8 kB]
1807s Get:91 http://ftpmaster.internal/ubuntu plucky/main amd64 libnghttp2-dev amd64 1.64.0-1 [123 kB]
1808s Get:92 http://ftpmaster.internal/ubuntu plucky/main amd64 libpsl-dev amd64 0.21.2-1.1build1 [76.4 kB]
1808s Get:93 http://ftpmaster.internal/ubuntu plucky/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu1 [895 kB]
1809s Get:94 http://ftpmaster.internal/ubuntu plucky/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2build7 [66.7 kB]
1810s Get:95 http://ftpmaster.internal/ubuntu plucky/main amd64 libssl-dev amd64 3.3.1-2ubuntu2 [2686 kB]
1814s Get:96 http://ftpmaster.internal/ubuntu plucky/main amd64 libssh2-1-dev amd64 1.11.0-7 [260 kB]
1815s Get:97 http://ftpmaster.internal/ubuntu plucky/main amd64 libzstd-dev amd64 1.5.6+dfsg-1 [371 kB]
1815s Get:98 http://ftpmaster.internal/ubuntu plucky/main amd64 libcurl4-gnutls-dev amd64 8.9.1-2ubuntu2 [476 kB]
1816s Get:99 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate0 amd64 1.22-1 [64.5 kB]
1816s Get:100 http://ftpmaster.internal/ubuntu plucky/main amd64 libdeflate-dev amd64 1.22-1 [72.2 kB]
1816s Get:101 http://ftpmaster.internal/ubuntu plucky/main i386 libgomp1 i386 14.2.0-7ubuntu1 [151 kB]
1817s Get:102 http://ftpmaster.internal/ubuntu plucky/main i386 libitm1 i386 14.2.0-7ubuntu1 [30.7 kB]
1817s Get:103 http://ftpmaster.internal/ubuntu plucky/main i386 libubsan1 i386 14.2.0-7ubuntu1 [1145 kB]
1818s Get:104 http://ftpmaster.internal/ubuntu plucky/main i386 libquadmath0 i386 14.2.0-7ubuntu1 [247 kB]
1819s Get:105 http://ftpmaster.internal/ubuntu plucky/universe i386 libgcc-12-dev i386 12.4.0-2ubuntu1 [2552 kB]
1822s Get:106 http://ftpmaster.internal/ubuntu plucky/universe amd64 libhtscodecs2 amd64 1.6.1-1 [132 kB]
1822s Get:107 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 libhts3t64 amd64 1.20+ds-2 [501 kB]
1822s Get:108 http://ftpmaster.internal/ubuntu plucky/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB]
1823s Get:109 http://ftpmaster.internal/ubuntu plucky-proposed/universe amd64 libhts-dev amd64 1.20+ds-2 [6298 kB]
1830s Get:110 http://ftpmaster.internal/ubuntu plucky/universe amd64 libpcre3 amd64 2:8.39-15.1 [253 kB]
1831s Get:111 http://ftpmaster.internal/ubuntu plucky/universe i386 libstdc++-12-dev i386 12.4.0-2ubuntu1 [2273 kB]
1833s Get:112 http://ftpmaster.internal/ubuntu plucky/universe amd64 nim amd64 1.6.14-1ubuntu2 [4292 kB]
1837s Get:113 http://ftpmaster.internal/ubuntu plucky/universe amd64 nim-hts-dev all 0.3.19+ds-1ubuntu2 [35.1 kB]
1838s Get:114 http://ftpmaster.internal/ubuntu plucky/universe amd64 nim-hts-examples all 0.3.19+ds-1ubuntu2 [1162 kB]
1839s Preconfiguring packages ...
1839s Fetched 175 MB in 4min 47s (611 kB/s)
1839s Selecting previously unselected package gcc-14-base:i386.
1839s (Reading database ... 
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1839s Preparing to unpack .../000-gcc-14-base_14.2.0-7ubuntu1_i386.deb ...
1839s Unpacking gcc-14-base:i386 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libgcc-s1:i386.
1840s Preparing to unpack .../001-libgcc-s1_14.2.0-7ubuntu1_i386.deb ...
1840s Unpacking libgcc-s1:i386 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libc6:i386.
1840s Preparing to unpack .../002-libc6_2.40-1ubuntu3_i386.deb ...
1840s Unpacking libc6:i386 (2.40-1ubuntu3) ...
1840s Selecting previously unselected package libcrypt1:i386.
1840s Preparing to unpack .../003-libcrypt1_1%3a4.4.36-4build1_i386.deb ...
1840s Unpacking libcrypt1:i386 (1:4.4.36-4build1) ...
1840s Selecting previously unselected package libatomic1:i386.
1840s Preparing to unpack .../004-libatomic1_14.2.0-7ubuntu1_i386.deb ...
1840s Unpacking libatomic1:i386 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libstdc++6:i386.
1840s Preparing to unpack .../005-libstdc++6_14.2.0-7ubuntu1_i386.deb ...
1840s Unpacking libstdc++6:i386 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libisl23:amd64.
1840s Preparing to unpack .../006-libisl23_0.27-1_amd64.deb ...
1840s Unpacking libisl23:amd64 (0.27-1) ...
1840s Selecting previously unselected package libmpc3:amd64.
1840s Preparing to unpack .../007-libmpc3_1.3.1-1build2_amd64.deb ...
1840s Unpacking libmpc3:amd64 (1.3.1-1build2) ...
1840s Selecting previously unselected package cpp-14-x86-64-linux-gnu.
1840s Preparing to unpack .../008-cpp-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package cpp-14.
1840s Preparing to unpack .../009-cpp-14_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking cpp-14 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package cpp-x86-64-linux-gnu.
1840s Preparing to unpack .../010-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1840s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1840s Selecting previously unselected package cpp.
1840s Preparing to unpack .../011-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ...
1840s Unpacking cpp (4:14.1.0-2ubuntu1) ...
1840s Selecting previously unselected package libcc1-0:amd64.
1840s Preparing to unpack .../012-libcc1-0_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libcc1-0:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libgomp1:amd64.
1840s Preparing to unpack .../013-libgomp1_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libgomp1:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libitm1:amd64.
1840s Preparing to unpack .../014-libitm1_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libitm1:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libasan8:amd64.
1840s Preparing to unpack .../015-libasan8_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libasan8:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package liblsan0:amd64.
1840s Preparing to unpack .../016-liblsan0_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking liblsan0:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libtsan2:amd64.
1840s Preparing to unpack .../017-libtsan2_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libtsan2:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libubsan1:amd64.
1840s Preparing to unpack .../018-libubsan1_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libubsan1:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libhwasan0:amd64.
1840s Preparing to unpack .../019-libhwasan0_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libhwasan0:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libquadmath0:amd64.
1840s Preparing to unpack .../020-libquadmath0_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libquadmath0:amd64 (14.2.0-7ubuntu1) ...
1840s Selecting previously unselected package libgcc-14-dev:amd64.
1840s Preparing to unpack .../021-libgcc-14-dev_14.2.0-7ubuntu1_amd64.deb ...
1840s Unpacking libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package gcc-14-x86-64-linux-gnu.
1841s Preparing to unpack .../022-gcc-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ...
1841s Unpacking gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package gcc-14.
1841s Preparing to unpack .../023-gcc-14_14.2.0-7ubuntu1_amd64.deb ...
1841s Unpacking gcc-14 (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package gcc-x86-64-linux-gnu.
1841s Preparing to unpack .../024-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1841s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1841s Selecting previously unselected package gcc.
1841s Preparing to unpack .../025-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ...
1841s Unpacking gcc (4:14.1.0-2ubuntu1) ...
1841s Selecting previously unselected package libstdc++-14-dev:amd64.
1841s Preparing to unpack .../026-libstdc++-14-dev_14.2.0-7ubuntu1_amd64.deb ...
1841s Unpacking libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package g++-14-x86-64-linux-gnu.
1841s Preparing to unpack .../027-g++-14-x86-64-linux-gnu_14.2.0-7ubuntu1_amd64.deb ...
1841s Unpacking g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package g++-14.
1841s Preparing to unpack .../028-g++-14_14.2.0-7ubuntu1_amd64.deb ...
1841s Unpacking g++-14 (14.2.0-7ubuntu1) ...
1841s Selecting previously unselected package g++-x86-64-linux-gnu.
1841s Preparing to unpack .../029-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1841s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1841s Selecting previously unselected package g++.
1841s Preparing to unpack .../030-g++_4%3a14.1.0-2ubuntu1_amd64.deb ...
1841s Unpacking g++ (4:14.1.0-2ubuntu1) ...
1841s Selecting previously unselected package build-essential.
1841s Preparing to unpack .../031-build-essential_12.10ubuntu1_amd64.deb ...
1841s Unpacking build-essential (12.10ubuntu1) ...
1841s Selecting previously unselected package gcc-14-i686-linux-gnu-base:amd64.
1841s Preparing to unpack .../032-gcc-14-i686-linux-gnu-base_14.2.0-4ubuntu2cross1_amd64.deb ...
1841s Unpacking gcc-14-i686-linux-gnu-base:amd64 (14.2.0-4ubuntu2cross1) ...
1841s Selecting previously unselected package cpp-14-i686-linux-gnu.
1841s Preparing to unpack .../033-cpp-14-i686-linux-gnu_14.2.0-4ubuntu2cross1_amd64.deb ...
1841s Unpacking cpp-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package cpp-i686-linux-gnu.
1842s Preparing to unpack .../034-cpp-i686-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1842s Unpacking cpp-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1842s Selecting previously unselected package binutils-i686-linux-gnu.
1842s Preparing to unpack .../035-binutils-i686-linux-gnu_2.43.1-4ubuntu1_amd64.deb ...
1842s Unpacking binutils-i686-linux-gnu (2.43.1-4ubuntu1) ...
1842s Selecting previously unselected package gcc-14-cross-base.
1842s Preparing to unpack .../036-gcc-14-cross-base_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking gcc-14-cross-base (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libc6-i386-cross.
1842s Preparing to unpack .../037-libc6-i386-cross_2.40-1ubuntu3cross1_all.deb ...
1842s Unpacking libc6-i386-cross (2.40-1ubuntu3cross1) ...
1842s Selecting previously unselected package libgcc-s1-i386-cross.
1842s Preparing to unpack .../038-libgcc-s1-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libgcc-s1-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libgomp1-i386-cross.
1842s Preparing to unpack .../039-libgomp1-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libgomp1-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libitm1-i386-cross.
1842s Preparing to unpack .../040-libitm1-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libitm1-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libatomic1-i386-cross.
1842s Preparing to unpack .../041-libatomic1-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libatomic1-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libasan8-i386-cross.
1842s Preparing to unpack .../042-libasan8-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libasan8-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libstdc++6-i386-cross.
1842s Preparing to unpack .../043-libstdc++6-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libstdc++6-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libubsan1-i386-cross.
1842s Preparing to unpack .../044-libubsan1-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libubsan1-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libquadmath0-i386-cross.
1842s Preparing to unpack .../045-libquadmath0-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libquadmath0-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package libgcc-14-dev-i386-cross.
1842s Preparing to unpack .../046-libgcc-14-dev-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1842s Unpacking libgcc-14-dev-i386-cross (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package gcc-14-i686-linux-gnu.
1842s Preparing to unpack .../047-gcc-14-i686-linux-gnu_14.2.0-4ubuntu2cross1_amd64.deb ...
1842s Unpacking gcc-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1842s Selecting previously unselected package gcc-i686-linux-gnu.
1842s Preparing to unpack .../048-gcc-i686-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1842s Unpacking gcc-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1842s Selecting previously unselected package linux-libc-dev-i386-cross.
1842s Preparing to unpack .../049-linux-libc-dev-i386-cross_6.11.0-7.7cross1_all.deb ...
1842s Unpacking linux-libc-dev-i386-cross (6.11.0-7.7cross1) ...
1843s Selecting previously unselected package libc6-dev-i386-cross.
1843s Preparing to unpack .../050-libc6-dev-i386-cross_2.40-1ubuntu3cross1_all.deb ...
1843s Unpacking libc6-dev-i386-cross (2.40-1ubuntu3cross1) ...
1843s Selecting previously unselected package libstdc++-14-dev-i386-cross.
1843s Preparing to unpack .../051-libstdc++-14-dev-i386-cross_14.2.0-4ubuntu2cross1_all.deb ...
1843s Unpacking libstdc++-14-dev-i386-cross (14.2.0-4ubuntu2cross1) ...
1843s Selecting previously unselected package g++-14-i686-linux-gnu.
1843s Preparing to unpack .../052-g++-14-i686-linux-gnu_14.2.0-4ubuntu2cross1_amd64.deb ...
1843s Unpacking g++-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1843s Selecting previously unselected package g++-i686-linux-gnu.
1843s Preparing to unpack .../053-g++-i686-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ...
1843s Unpacking g++-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1843s Selecting previously unselected package libconfig-inifiles-perl.
1843s Preparing to unpack .../054-libconfig-inifiles-perl_3.000003-3_all.deb ...
1843s Unpacking libconfig-inifiles-perl (3.000003-3) ...
1843s Selecting previously unselected package libio-string-perl.
1843s Preparing to unpack .../055-libio-string-perl_1.08-4_all.deb ...
1843s Unpacking libio-string-perl (1.08-4) ...
1843s Selecting previously unselected package libxml-namespacesupport-perl.
1843s Preparing to unpack .../056-libxml-namespacesupport-perl_1.12-2_all.deb ...
1843s Unpacking libxml-namespacesupport-perl (1.12-2) ...
1843s Selecting previously unselected package libxml-sax-base-perl.
1843s Preparing to unpack .../057-libxml-sax-base-perl_1.09-3_all.deb ...
1843s Unpacking libxml-sax-base-perl (1.09-3) ...
1843s Selecting previously unselected package libxml-sax-perl.
1843s Preparing to unpack .../058-libxml-sax-perl_1.02+dfsg-3_all.deb ...
1843s Unpacking libxml-sax-perl (1.02+dfsg-3) ...
1843s Selecting previously unselected package libxml-libxml-perl.
1843s Preparing to unpack .../059-libxml-libxml-perl_2.0207+dfsg+really+2.0134-5_amd64.deb ...
1843s Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-5) ...
1843s Selecting previously unselected package libxml-simple-perl.
1843s Preparing to unpack .../060-libxml-simple-perl_2.25-2_all.deb ...
1843s Unpacking libxml-simple-perl (2.25-2) ...
1843s Selecting previously unselected package libyaml-perl.
1843s Preparing to unpack .../061-libyaml-perl_1.31-1_all.deb ...
1843s Unpacking libyaml-perl (1.31-1) ...
1843s Selecting previously unselected package libconfig-auto-perl.
1843s Preparing to unpack .../062-libconfig-auto-perl_0.44-2_all.deb ...
1843s Unpacking libconfig-auto-perl (0.44-2) ...
1843s Selecting previously unselected package libfile-which-perl.
1843s Preparing to unpack .../063-libfile-which-perl_1.27-2_all.deb ...
1843s Unpacking libfile-which-perl (1.27-2) ...
1843s Selecting previously unselected package libfile-homedir-perl.
1843s Preparing to unpack .../064-libfile-homedir-perl_1.006-2_all.deb ...
1843s Unpacking libfile-homedir-perl (1.006-2) ...
1843s Selecting previously unselected package libdebian-dpkgcross-perl.
1843s Preparing to unpack .../065-libdebian-dpkgcross-perl_2.6.20_all.deb ...
1843s Unpacking libdebian-dpkgcross-perl (2.6.20) ...
1843s Selecting previously unselected package cross-config.
1843s Preparing to unpack .../066-cross-config_2.6.20_all.deb ...
1843s Unpacking cross-config (2.6.20) ...
1843s Selecting previously unselected package dpkg-cross.
1843s Preparing to unpack .../067-dpkg-cross_2.6.20_all.deb ...
1843s Unpacking dpkg-cross (2.6.20) ...
1843s Selecting previously unselected package crossbuild-essential-i386.
1843s Preparing to unpack .../068-crossbuild-essential-i386_12.10ubuntu1_all.deb ...
1843s Unpacking crossbuild-essential-i386 (12.10ubuntu1) ...
1843s Selecting previously unselected package gcc-12-base:i386.
1843s Preparing to unpack .../069-gcc-12-base_12.4.0-2ubuntu1_i386.deb ...
1843s Unpacking gcc-12-base:i386 (12.4.0-2ubuntu1) ...
1843s Selecting previously unselected package libasan8:i386.
1843s Preparing to unpack .../070-libasan8_14.2.0-7ubuntu1_i386.deb ...
1843s Unpacking libasan8:i386 (14.2.0-7ubuntu1) ...
1843s Selecting previously unselected package libbrotli-dev:amd64.
1843s Preparing to unpack .../071-libbrotli-dev_1.1.0-2build2_amd64.deb ...
1843s Unpacking libbrotli-dev:amd64 (1.1.0-2build2) ...
1843s Selecting previously unselected package libbz2-dev:amd64.
1843s Preparing to unpack .../072-libbz2-dev_1.0.8-6_amd64.deb ...
1843s Unpacking libbz2-dev:amd64 (1.0.8-6) ...
1844s Selecting previously unselected package linux-libc-dev:i386.
1844s Preparing to unpack .../073-linux-libc-dev_6.11.0-8.8_i386.deb ...
1844s Unpacking linux-libc-dev:i386 (6.11.0-8.8) ...
1844s Selecting previously unselected package libcrypt-dev:i386.
1844s Preparing to unpack .../074-libcrypt-dev_1%3a4.4.36-4build1_i386.deb ...
1844s Unpacking libcrypt-dev:i386 (1:4.4.36-4build1) ...
1844s Selecting previously unselected package libc6-dev:i386.
1844s Preparing to unpack .../075-libc6-dev_2.40-1ubuntu3_i386.deb ...
1844s Unpacking libc6-dev:i386 (2.40-1ubuntu3) ...
1844s Selecting previously unselected package libevent-2.1-7t64:amd64.
1844s Preparing to unpack .../076-libevent-2.1-7t64_2.1.12-stable-10_amd64.deb ...
1844s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10) ...
1844s Selecting previously unselected package libunbound8:amd64.
1844s Preparing to unpack .../077-libunbound8_1.20.0-1ubuntu2.1_amd64.deb ...
1844s Unpacking libunbound8:amd64 (1.20.0-1ubuntu2.1) ...
1844s Selecting previously unselected package libgnutls-dane0t64:amd64.
1844s Preparing to unpack .../078-libgnutls-dane0t64_3.8.6-2ubuntu1_amd64.deb ...
1844s Unpacking libgnutls-dane0t64:amd64 (3.8.6-2ubuntu1) ...
1844s Selecting previously unselected package libgnutls-openssl27t64:amd64.
1844s Preparing to unpack .../079-libgnutls-openssl27t64_3.8.6-2ubuntu1_amd64.deb ...
1844s Unpacking libgnutls-openssl27t64:amd64 (3.8.6-2ubuntu1) ...
1844s Selecting previously unselected package libidn2-dev:amd64.
1844s Preparing to unpack .../080-libidn2-dev_2.3.7-2build2_amd64.deb ...
1844s Unpacking libidn2-dev:amd64 (2.3.7-2build2) ...
1844s Selecting previously unselected package libp11-kit-dev:amd64.
1844s Preparing to unpack .../081-libp11-kit-dev_0.25.5-2ubuntu1_amd64.deb ...
1844s Unpacking libp11-kit-dev:amd64 (0.25.5-2ubuntu1) ...
1844s Selecting previously unselected package libtasn1-6-dev:amd64.
1844s Preparing to unpack .../082-libtasn1-6-dev_4.19.0-3build1_amd64.deb ...
1844s Unpacking libtasn1-6-dev:amd64 (4.19.0-3build1) ...
1844s Selecting previously unselected package libgmpxx4ldbl:amd64.
1844s Preparing to unpack .../083-libgmpxx4ldbl_2%3a6.3.0+dfsg-2ubuntu7_amd64.deb ...
1844s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-2ubuntu7) ...
1844s Selecting previously unselected package libgmp-dev:amd64.
1844s Preparing to unpack .../084-libgmp-dev_2%3a6.3.0+dfsg-2ubuntu7_amd64.deb ...
1844s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-2ubuntu7) ...
1844s Selecting previously unselected package nettle-dev:amd64.
1844s Preparing to unpack .../085-nettle-dev_3.10-1_amd64.deb ...
1844s Unpacking nettle-dev:amd64 (3.10-1) ...
1844s Selecting previously unselected package libgnutls28-dev:amd64.
1844s Preparing to unpack .../086-libgnutls28-dev_3.8.6-2ubuntu1_amd64.deb ...
1844s Unpacking libgnutls28-dev:amd64 (3.8.6-2ubuntu1) ...
1844s Selecting previously unselected package libpkgconf3:amd64.
1844s Preparing to unpack .../087-libpkgconf3_1.8.1-4_amd64.deb ...
1844s Unpacking libpkgconf3:amd64 (1.8.1-4) ...
1844s Selecting previously unselected package pkgconf-bin.
1844s Preparing to unpack .../088-pkgconf-bin_1.8.1-4_amd64.deb ...
1844s Unpacking pkgconf-bin (1.8.1-4) ...
1844s Selecting previously unselected package pkgconf:amd64.
1844s Preparing to unpack .../089-pkgconf_1.8.1-4_amd64.deb ...
1844s Unpacking pkgconf:amd64 (1.8.1-4) ...
1844s Selecting previously unselected package libnghttp2-dev:amd64.
1844s Preparing to unpack .../090-libnghttp2-dev_1.64.0-1_amd64.deb ...
1844s Unpacking libnghttp2-dev:amd64 (1.64.0-1) ...
1844s Selecting previously unselected package libpsl-dev:amd64.
1844s Preparing to unpack .../091-libpsl-dev_0.21.2-1.1build1_amd64.deb ...
1844s Unpacking libpsl-dev:amd64 (0.21.2-1.1build1) ...
1844s Selecting previously unselected package zlib1g-dev:amd64.
1844s Preparing to unpack .../092-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_amd64.deb ...
1844s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1844s Selecting previously unselected package librtmp-dev:amd64.
1844s Preparing to unpack .../093-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_amd64.deb ...
1844s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build7) ...
1845s Selecting previously unselected package libssl-dev:amd64.
1845s Preparing to unpack .../094-libssl-dev_3.3.1-2ubuntu2_amd64.deb ...
1845s Unpacking libssl-dev:amd64 (3.3.1-2ubuntu2) ...
1845s Selecting previously unselected package libssh2-1-dev:amd64.
1845s Preparing to unpack .../095-libssh2-1-dev_1.11.0-7_amd64.deb ...
1845s Unpacking libssh2-1-dev:amd64 (1.11.0-7) ...
1845s Selecting previously unselected package libzstd-dev:amd64.
1845s Preparing to unpack .../096-libzstd-dev_1.5.6+dfsg-1_amd64.deb ...
1845s Unpacking libzstd-dev:amd64 (1.5.6+dfsg-1) ...
1845s Selecting previously unselected package libcurl4-gnutls-dev:amd64.
1845s Preparing to unpack .../097-libcurl4-gnutls-dev_8.9.1-2ubuntu2_amd64.deb ...
1845s Unpacking libcurl4-gnutls-dev:amd64 (8.9.1-2ubuntu2) ...
1845s Selecting previously unselected package libdeflate0:amd64.
1845s Preparing to unpack .../098-libdeflate0_1.22-1_amd64.deb ...
1845s Unpacking libdeflate0:amd64 (1.22-1) ...
1845s Selecting previously unselected package libdeflate-dev:amd64.
1845s Preparing to unpack .../099-libdeflate-dev_1.22-1_amd64.deb ...
1845s Unpacking libdeflate-dev:amd64 (1.22-1) ...
1845s Selecting previously unselected package libgomp1:i386.
1845s Preparing to unpack .../100-libgomp1_14.2.0-7ubuntu1_i386.deb ...
1845s Unpacking libgomp1:i386 (14.2.0-7ubuntu1) ...
1845s Selecting previously unselected package libitm1:i386.
1845s Preparing to unpack .../101-libitm1_14.2.0-7ubuntu1_i386.deb ...
1845s Unpacking libitm1:i386 (14.2.0-7ubuntu1) ...
1845s Selecting previously unselected package libubsan1:i386.
1845s Preparing to unpack .../102-libubsan1_14.2.0-7ubuntu1_i386.deb ...
1845s Unpacking libubsan1:i386 (14.2.0-7ubuntu1) ...
1845s Selecting previously unselected package libquadmath0:i386.
1845s Preparing to unpack .../103-libquadmath0_14.2.0-7ubuntu1_i386.deb ...
1845s Unpacking libquadmath0:i386 (14.2.0-7ubuntu1) ...
1845s Selecting previously unselected package libgcc-12-dev:i386.
1845s Preparing to unpack .../104-libgcc-12-dev_12.4.0-2ubuntu1_i386.deb ...
1845s Unpacking libgcc-12-dev:i386 (12.4.0-2ubuntu1) ...
1845s Selecting previously unselected package libhtscodecs2:amd64.
1845s Preparing to unpack .../105-libhtscodecs2_1.6.1-1_amd64.deb ...
1845s Unpacking libhtscodecs2:amd64 (1.6.1-1) ...
1845s Selecting previously unselected package libhts3t64:amd64.
1845s Preparing to unpack .../106-libhts3t64_1.20+ds-2_amd64.deb ...
1845s Unpacking libhts3t64:amd64 (1.20+ds-2) ...
1845s Selecting previously unselected package liblzma-dev:amd64.
1845s Preparing to unpack .../107-liblzma-dev_5.6.2-2_amd64.deb ...
1845s Unpacking liblzma-dev:amd64 (5.6.2-2) ...
1845s Selecting previously unselected package libhts-dev:amd64.
1845s Preparing to unpack .../108-libhts-dev_1.20+ds-2_amd64.deb ...
1845s Unpacking libhts-dev:amd64 (1.20+ds-2) ...
1845s Selecting previously unselected package libpcre3:amd64.
1845s Preparing to unpack .../109-libpcre3_2%3a8.39-15.1_amd64.deb ...
1845s Unpacking libpcre3:amd64 (2:8.39-15.1) ...
1845s Selecting previously unselected package libstdc++-12-dev:i386.
1845s Preparing to unpack .../110-libstdc++-12-dev_12.4.0-2ubuntu1_i386.deb ...
1845s Unpacking libstdc++-12-dev:i386 (12.4.0-2ubuntu1) ...
1845s Selecting previously unselected package nim.
1845s Preparing to unpack .../111-nim_1.6.14-1ubuntu2_amd64.deb ...
1845s Unpacking nim (1.6.14-1ubuntu2) ...
1845s Selecting previously unselected package nim-hts-dev.
1845s Preparing to unpack .../112-nim-hts-dev_0.3.19+ds-1ubuntu2_all.deb ...
1845s Unpacking nim-hts-dev (0.3.19+ds-1ubuntu2) ...
1845s Selecting previously unselected package nim-hts-examples.
1845s Preparing to unpack .../113-nim-hts-examples_0.3.19+ds-1ubuntu2_all.deb ...
1845s Unpacking nim-hts-examples (0.3.19+ds-1ubuntu2) ...
1846s Setting up libhtscodecs2:amd64 (1.6.1-1) ...
1846s Setting up libconfig-inifiles-perl (3.000003-3) ...
1846s Setting up libgnutls-openssl27t64:amd64 (3.8.6-2ubuntu1) ...
1846s Setting up libfile-which-perl (1.27-2) ...
1846s Setting up libzstd-dev:amd64 (1.5.6+dfsg-1) ...
1846s Setting up gcc-14-base:i386 (14.2.0-7ubuntu1) ...
1846s Setting up binutils-i686-linux-gnu (2.43.1-4ubuntu1) ...
1846s Setting up libdeflate0:amd64 (1.22-1) ...
1846s Setting up linux-libc-dev:i386 (6.11.0-8.8) ...
1846s Setting up libxml-namespacesupport-perl (1.12-2) ...
1846s Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10) ...
1846s Setting up gcc-14-i686-linux-gnu-base:amd64 (14.2.0-4ubuntu2cross1) ...
1846s Setting up gcc-14-cross-base (14.2.0-4ubuntu2cross1) ...
1846s Setting up libgomp1:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libyaml-perl (1.31-1) ...
1846s Setting up libpsl-dev:amd64 (0.21.2-1.1build1) ...
1846s Setting up gcc-12-base:i386 (12.4.0-2ubuntu1) ...
1846s Setting up libxml-sax-base-perl (1.09-3) ...
1846s Setting up libio-string-perl (1.08-4) ...
1846s Setting up libpcre3:amd64 (2:8.39-15.1) ...
1846s Setting up linux-libc-dev-i386-cross (6.11.0-7.7cross1) ...
1846s Setting up cross-config (2.6.20) ...
1846s Setting up libunbound8:amd64 (1.20.0-1ubuntu2.1) ...
1846s Setting up libpkgconf3:amd64 (1.8.1-4) ...
1846s Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-2ubuntu7) ...
1846s Setting up libgnutls-dane0t64:amd64 (3.8.6-2ubuntu1) ...
1846s Setting up libquadmath0:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libssl-dev:amd64 (3.3.1-2ubuntu2) ...
1846s Setting up libmpc3:amd64 (1.3.1-1build2) ...
1846s Setting up pkgconf-bin (1.8.1-4) ...
1846s Setting up libidn2-dev:amd64 (2.3.7-2build2) ...
1846s Setting up liblzma-dev:amd64 (5.6.2-2) ...
1846s Setting up libubsan1:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1846s Setting up libhwasan0:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libasan8:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libc6-i386-cross (2.40-1ubuntu3cross1) ...
1846s Setting up libhts3t64:amd64 (1.20+ds-2) ...
1846s Setting up nim (1.6.14-1ubuntu2) ...
1846s Setting up libtsan2:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libisl23:amd64 (0.27-1) ...
1846s Setting up cpp-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1846s Setting up libfile-homedir-perl (1.006-2) ...
1846s Setting up libtasn1-6-dev:amd64 (4.19.0-3build1) ...
1846s Setting up libdeflate-dev:amd64 (1.22-1) ...
1846s Setting up libquadmath0-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up libcc1-0:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libbrotli-dev:amd64 (1.1.0-2build2) ...
1846s Setting up liblsan0:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libp11-kit-dev:amd64 (0.25.5-2ubuntu1) ...
1846s Setting up libitm1:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up nim-hts-examples (0.3.19+ds-1ubuntu2) ...
1846s Setting up libbz2-dev:amd64 (1.0.8-6) ...
1846s Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-2ubuntu7) ...
1846s Setting up nettle-dev:amd64 (3.10-1) ...
1846s Setting up libatomic1-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up libgomp1-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up libc6-dev-i386-cross (2.40-1ubuntu3cross1) ...
1846s Setting up libxml-sax-perl (1.02+dfsg-3) ...
1846s update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
1846s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
1846s 
1846s Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
1846s Setting up pkgconf:amd64 (1.8.1-4) ...
1846s Setting up libgcc-s1-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up nim-hts-dev (0.3.19+ds-1ubuntu2) ...
1846s Setting up libitm1-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up cpp-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1846s Setting up libssh2-1-dev:amd64 (1.11.0-7) ...
1846s Setting up cpp-14 (14.2.0-7ubuntu1) ...
1846s Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5) ...
1846s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
1846s update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
1846s update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
1846s Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
1846s Setting up cpp-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up libgcc-14-dev:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up libstdc++-14-dev:amd64 (14.2.0-7ubuntu1) ...
1846s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up libgnutls28-dev:amd64 (3.8.6-2ubuntu1) ...
1846s Setting up libnghttp2-dev:amd64 (1.64.0-1) ...
1846s Setting up libasan8-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up libstdc++6-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build7) ...
1846s Setting up libxml-simple-perl (2.25-2) ...
1846s Setting up cpp (4:14.1.0-2ubuntu1) ...
1846s Setting up gcc-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1846s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up libubsan1-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up libconfig-auto-perl (0.44-2) ...
1846s Setting up libcurl4-gnutls-dev:amd64 (8.9.1-2ubuntu2) ...
1846s Setting up gcc-14 (14.2.0-7ubuntu1) ...
1846s Setting up g++-14-x86-64-linux-gnu (14.2.0-7ubuntu1) ...
1846s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up g++-14 (14.2.0-7ubuntu1) ...
1846s Setting up libdebian-dpkgcross-perl (2.6.20) ...
1846s Setting up libhts-dev:amd64 (1.20+ds-2) ...
1846s Setting up libgcc-14-dev-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up gcc (4:14.1.0-2ubuntu1) ...
1846s Setting up gcc-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1846s Setting up g++ (4:14.1.0-2ubuntu1) ...
1846s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
1846s Setting up gcc-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up build-essential (12.10ubuntu1) ...
1846s Setting up libstdc++-14-dev-i386-cross (14.2.0-4ubuntu2cross1) ...
1846s Setting up dpkg-cross (2.6.20) ...
1846s Setting up g++-14-i686-linux-gnu (14.2.0-4ubuntu2cross1) ...
1846s Setting up g++-i686-linux-gnu (4:14.1.0-2ubuntu1) ...
1846s Setting up crossbuild-essential-i386 (12.10ubuntu1) ...
1846s Setting up libgcc-s1:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libc6:i386 (2.40-1ubuntu3) ...
1846s Setting up libasan8:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libstdc++6:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libitm1:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libcrypt1:i386 (1:4.4.36-4build1) ...
1846s Setting up libgomp1:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libquadmath0:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libatomic1:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libubsan1:i386 (14.2.0-7ubuntu1) ...
1846s Setting up libcrypt-dev:i386 (1:4.4.36-4build1) ...
1846s Setting up libc6-dev:i386 (2.40-1ubuntu3) ...
1846s Setting up libgcc-12-dev:i386 (12.4.0-2ubuntu1) ...
1846s Setting up libstdc++-12-dev:i386 (12.4.0-2ubuntu1) ...
1846s Processing triggers for libc-bin (2.40-1ubuntu3) ...
1846s Processing triggers for man-db (2.12.1-3) ...
1848s Processing triggers for install-info (7.1.1-1) ...
1848s Processing triggers for systemd (256.5-2ubuntu4) ...
1850s Reading package lists...
1850s Building dependency tree...
1850s Reading state information...
1850s Starting pkgProblemResolver with broken count: 0
1850s Starting 2 pkgProblemResolver with broken count: 0
1850s Done
1850s The following NEW packages will be installed:
1850s   autopkgtest-satdep
1850s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
1850s Need to get 0 B/700 B of archives.
1850s After this operation, 0 B of additional disk space will be used.
1850s Get:1 /tmp/autopkgtest.19BS1H/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [700 B]
1851s Selecting previously unselected package autopkgtest-satdep.
1851s (Reading database ... 
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1851s Preparing to unpack .../2-autopkgtest-satdep.deb ...
1851s Unpacking autopkgtest-satdep (0) ...
1851s Setting up autopkgtest-satdep (0) ...
1852s (Reading database ... 83403 files and directories currently installed.)
1852s Removing autopkgtest-satdep (0) ...
1853s autopkgtest [15:37:38]: test run-unit-test: [-----------------------
1853s TEST 1
1853s Hint: used config file '/etc/nim/nim.cfg' [Conf]
1853s Hint: used config file '/etc/nim/config.nims' [Conf]
1854s .................................................................................
1854s /usr/share/nimble/hts/hts/bam/flag.nim(1, 18) Hint: duplicate import of 'hts_concat'; previous import here: /usr/share/nimble/hts/hts/bam.nim(1, 17) [DuplicateModuleImport]
1854s .
1854s /usr/share/nimble/hts/hts/bam/cigar.nim(1, 18) Hint: duplicate import of 'hts_concat'; previous import here: /usr/share/nimble/hts/hts/bam/flag.nim(1, 18) [DuplicateModuleImport]
1854s /usr/share/nimble/hts/hts/bam/cigar.nim(2, 8) Hint: duplicate import of 'strutils'; previous import here: /usr/share/nimble/hts/hts/bam.nim(4, 8) [DuplicateModuleImport]
1854s /usr/share/nimble/hts/hts/bam/cigar.nim(57, 34) Warning: target type is larger than source type [CastSizes]
1854s /usr/share/nimble/hts/hts/bam.nim(248, 34) template/generic instantiation of `bam_get_cigar` from here
1854s /usr/share/nimble/hts/hts/bam/cigar.nim(52, 46) Warning: target type is larger than source type [CastSizes]
1854s /usr/share/nimble/hts/hts/bam.nim(262, 52) Warning: implicit conversion to 'cstring' from a non-const location: region; this will become a compile time error in the future [CStringConv]
1854s /usr/share/nimble/hts/hts/bam.nim(373, 28) Warning: implicit conversion to 'cstring' from a non-const location: mode; this will become a compile time error in the future [CStringConv]
1854s ..
1854s /usr/share/nimble/hts/hts/bam/auxtags.nim(3, 1) Hint: duplicate import of 'strformat'; previous import here: /usr/share/nimble/hts/hts/bam.nim(3, 8) [DuplicateModuleImport]
1854s ..
1854s /usr/share/nimble/hts/hts/vcf.nim(118, 18) Warning: conversion to enum with holes is unsafe: Status(ret) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(119, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(181, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(190, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(288, 18) Warning: conversion to enum with holes is unsafe: Status(int(bcf_update_format(f.v.vcf.header.hdr, f.v.c, cstring(key), nil, 0,
1854s                              cint(htype)))) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(297, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(309, 22) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(320, 22) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(352, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(359, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(366, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(376, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(391, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(405, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(432, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(436, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(441, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(461, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(467, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(527, 23) Warning: conversion to enum with holes is unsafe: BCF_TYPE(fmt.type) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(542, 23) Warning: conversion to enum with holes is unsafe: BCF_TYPE(fld.type) [HoleEnumConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(601, 27) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(603, 31) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(645, 30) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(664, 36) Warning: implicit conversion to 'cstring' from a non-const location: `[]`(region) do:
1854s   0 .. pred(cidx, 1); this will become a compile time error in the future [CStringConv]
1854s /usr/share/nimble/hts/hts/vcf.nim(700, 32) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1854s .
1854s /usr/share/nimble/hts/hts/fai.nim(38, 24) Warning: See corresponding Defect; IndexError is deprecated [Deprecated]
1854s ...
1854s /usr/share/nimble/hts/hts/csi.nim(17, 51) Warning: implicit conversion to 'cstring' from a non-const location: base_path & ".csi"; this will become a compile time error in the future [CStringConv]
1854s .
1854s /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1.nim(20, 25) template/generic instantiation of `tag` from here
1854s /usr/share/nimble/hts/hts/bam/auxtags.nim(53, 7) Warning: unreachable code after 'return' statement or '{.noReturn.}' proc [UnreachableCode]
1854s /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1.nim(22, 19) template/generic instantiation of `tag` from here
1854s /usr/share/nimble/hts/hts/bam/auxtags.nim(63, 7) Warning: unreachable code after 'return' statement or '{.noReturn.}' proc [UnreachableCode]
1854s /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1.nim(22, 19) template/generic instantiation of `tag` from here
1854s /usr/share/nimble/hts/hts/bam/auxtags.nim(66, 7) Warning: unreachable code after 'return' statement or '{.noReturn.}' proc [UnreachableCode]
1854s /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1.nim(22, 19) template/generic instantiation of `tag` from here
1854s /usr/share/nimble/hts/hts/bam/auxtags.nim(74, 7) Warning: unreachable code after 'return' statement or '{.noReturn.}' proc [UnreachableCode]
1854s CC: ../../../usr/lib/nim/lib/std/private/digitsutils.nim
1854s CC: ../../../usr/lib/nim/lib/system/assertions.nim
1854s CC: ../../../usr/lib/nim/lib/system/dollars.nim
1854s CC: ../../../usr/lib/nim/lib/system/io.nim
1854s CC: ../../../usr/lib/nim/lib/system.nim
1854s CC: ../../../usr/share/nimble/hts/hts/private/hts_concat.nim
1854s CC: ../../../usr/lib/nim/lib/pure/parseutils.nim
1854s CC: ../../../usr/lib/nim/lib/pure/unicode.nim
1854s CC: ../../../usr/lib/nim/lib/pure/algorithm.nim
1854s CC: ../../../usr/lib/nim/lib/pure/strutils.nim
1854s CC: ../../../usr/lib/nim/lib/pure/strformat.nim
1854s CC: ../../../usr/share/nimble/hts/hts/bam.nim
1854s CC: ../../../usr/share/nimble/hts/hts/vcf.nim
1854s CC: ../../../usr/share/nimble/hts/hts.nim
1854s CC: test1.nim
1855s Hint:  [Link]
1855s Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code)
1855s 52438 lines; 1.278s; 60.852MiB peakmem; proj: /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1.nim; out: /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test1 [SuccessX]
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1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 21S false true
1855s 80M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 32S false true
1855s 69M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 2S false true
1855s 99M true true
1855s SRR741409
1855s 30S false true
1855s 71M true true
1855s SRR741409
1855s 66S false true
1855s 35M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 22S false true
1855s 79M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 15S false true
1855s 86M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 36S false true
1855s 65M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 1S false true
1855s 100M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 1S false true
1855s 100M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 9S false true
1855s 92M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 2S false true
1855s 99M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 31S false true
1855s 70M true true
1855s SRR741409
1855s 3S false true
1855s 98M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 41S false true
1855s 60M true true
1855s SRR741409
1855s 14S false true
1855s 87M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 1S false true
1855s 100M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 8S false true
1855s 93M true true
1855s SRR741410
1855s 66S false true
1855s 34M true true
1855s 1S false true
1855s 13S false true
1855s 88M true true
1855s SRR741409
1855s 20S false true
1855s 81M true true
1855s SRR741409
1855s 66S false true
1855s 35M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 1S false true
1855s 100M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 4S false true
1855s 97M true true
1855s SRR741410
1855s 38S false true
1855s 63M true true
1855s SRR741409
1855s 41S false true
1855s 60M true true
1855s SRR741409
1855s 27S false true
1855s 74M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 13S false true
1855s 88M true true
1855s SRR741410
1855s 25S false true
1855s 76M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 28S false true
1855s 73M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 3S false true
1855s 98M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 12S false true
1855s 89M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 19S false true
1855s 82M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 8S false true
1855s 93M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 1S false true
1855s 100M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 36S false true
1855s 65M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 49S false true
1855s 52M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 2S false true
1855s 99M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 4S false true
1855s 97M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 9S false true
1855s 92M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 51S false true
1855s 50M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 55S false true
1855s 46M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 35S false true
1855s 66M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 8S false true
1855s 93M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 20S false true
1855s 81M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 1S false true
1855s 100M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 16S false true
1855s 85M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 8S false true
1855s 93M true true
1855s SRR741410
1855s 5S false true
1855s 96M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 37S false true
1855s 64M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 71S false true
1855s 30M true true
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741409
1855s 66S false true
1855s 35M true true
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 101M true true
1855s SRR741410
1855s 101M true true
1855s SRR741409
1855s 39S false true
1855s 62M true true
1855s SRR741410
1855s =======================================
1855s PASS
1855s TEST 2
1855s Hint: used config file '/etc/nim/nim.cfg' [Conf]
1855s Hint: used config file '/etc/nim/config.nims' [Conf]
1855s .................................................................................
1855s /usr/share/nimble/hts/hts/bam/flag.nim(1, 18) Hint: duplicate import of 'hts_concat'; previous import here: /usr/share/nimble/hts/hts/bam.nim(1, 17) [DuplicateModuleImport]
1855s .
1855s /usr/share/nimble/hts/hts/bam/cigar.nim(1, 18) Hint: duplicate import of 'hts_concat'; previous import here: /usr/share/nimble/hts/hts/bam/flag.nim(1, 18) [DuplicateModuleImport]
1855s /usr/share/nimble/hts/hts/bam/cigar.nim(2, 8) Hint: duplicate import of 'strutils'; previous import here: /usr/share/nimble/hts/hts/bam.nim(4, 8) [DuplicateModuleImport]
1855s /usr/share/nimble/hts/hts/bam/cigar.nim(57, 34) Warning: target type is larger than source type [CastSizes]
1855s /usr/share/nimble/hts/hts/bam.nim(248, 34) template/generic instantiation of `bam_get_cigar` from here
1855s /usr/share/nimble/hts/hts/bam/cigar.nim(52, 46) Warning: target type is larger than source type [CastSizes]
1855s /usr/share/nimble/hts/hts/bam.nim(262, 52) Warning: implicit conversion to 'cstring' from a non-const location: region; this will become a compile time error in the future [CStringConv]
1855s /usr/share/nimble/hts/hts/bam.nim(373, 28) Warning: implicit conversion to 'cstring' from a non-const location: mode; this will become a compile time error in the future [CStringConv]
1855s ..
1855s /usr/share/nimble/hts/hts/bam/auxtags.nim(3, 1) Hint: duplicate import of 'strformat'; previous import here: /usr/share/nimble/hts/hts/bam.nim(3, 8) [DuplicateModuleImport]
1855s ..
1855s /usr/share/nimble/hts/hts/vcf.nim(118, 18) Warning: conversion to enum with holes is unsafe: Status(ret) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(119, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(181, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(190, 16) Warning: conversion to enum with holes is unsafe: Status(bcf_hdr_sync(h.hdr)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(288, 18) Warning: conversion to enum with holes is unsafe: Status(int(bcf_update_format(f.v.vcf.header.hdr, f.v.c, cstring(key), nil, 0,
1855s                              cint(htype)))) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(297, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(309, 22) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(320, 22) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(352, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(359, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(366, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(376, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(391, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(405, 20) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(432, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(436, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(441, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(461, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(467, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(527, 23) Warning: conversion to enum with holes is unsafe: BCF_TYPE(fmt.type) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(542, 23) Warning: conversion to enum with holes is unsafe: BCF_TYPE(fld.type) [HoleEnumConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(601, 27) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(603, 31) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(645, 30) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(664, 36) Warning: implicit conversion to 'cstring' from a non-const location: `[]`(region) do:
1855s   0 .. pred(cidx, 1); this will become a compile time error in the future [CStringConv]
1855s /usr/share/nimble/hts/hts/vcf.nim(700, 32) Warning: implicit conversion to 'cstring' from a non-const location: v.fname; this will become a compile time error in the future [CStringConv]
1855s .
1855s /usr/share/nimble/hts/hts/fai.nim(38, 24) Warning: See corresponding Defect; IndexError is deprecated [Deprecated]
1855s ...
1855s /usr/share/nimble/hts/hts/csi.nim(17, 51) Warning: implicit conversion to 'cstring' from a non-const location: base_path & ".csi"; this will become a compile time error in the future [CStringConv]
1855s .
1855s /tmp/autopkgtest.19BS1H/autopkgtest_tmp/test2.nim(36, 12) template/generic instantiation of `doAssert` from here
1855s /usr/share/nimble/hts/hts/vcf.nim(448, 16) Warning: conversion to enum with holes is unsafe: Status(int(ret)) [HoleEnumConv]
1855s CC: ../../../usr/lib/nim/lib/std/private/digitsutils.nim
1855s CC: ../../../usr/lib/nim/lib/system/assertions.nim
1855s CC: ../../../usr/lib/nim/lib/system/formatfloat.nim
1855s CC: ../../../usr/lib/nim/lib/system/dollars.nim
1855s CC: ../../../usr/lib/nim/lib/system/io.nim
1855s CC: ../../../usr/lib/nim/lib/system.nim
1855s CC: ../../../usr/share/nimble/hts/hts/private/hts_concat.nim
1855s CC: ../../../usr/lib/nim/lib/pure/parseutils.nim
1855s CC: ../../../usr/lib/nim/lib/pure/unicode.nim
1856s CC: ../../../usr/lib/nim/lib/pure/algorithm.nim
1856s CC: ../../../usr/lib/nim/lib/pure/strutils.nim
1856s CC: ../../../usr/lib/nim/lib/pure/strformat.nim
1856s CC: ../../../usr/share/nimble/hts/hts/vcf.nim
1856s CC: ../../../usr/share/nimble/hts/hts.nim
1856s CC: test2.nim
1856s /home/ubuntu/.cache/nim/test2_d/@mtest2.nim.c: In function ‘NimMainModule’:
1856s /home/ubuntu/.cache/nim/test2_d/@mtest2.nim.c:1935:51: error: assignment to ‘int (**)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, NI64 *, NI64 *)’ {aka ‘int (**)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, long int *, long int *)’} from incompatible pointer type ‘tyProc__2SK9ajKLihANR4Vql9aHKvqg’ {aka ‘int (*)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, long int *, long int *)’} [-Wincompatible-pointer-types]
1856s  1935 |                                         read_func = Dl_1023410510_;
1856s       |                                                   ^
1856s /home/ubuntu/.cache/nim/test2_d/@mtest2.nim.c:2116:41: error: assignment to ‘int (**)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, NI64 *, NI64 *)’ {aka ‘int (**)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, long int *, long int *)’} from incompatible pointer type ‘tyProc__2SK9ajKLihANR4Vql9aHKvqg’ {aka ‘int (*)(tyObject_BGZF__1CbgyLbhkQrH69bOSZgLbng *, void *, void *, int *, long int *, long int *)’} [-Wincompatible-pointer-types]
1856s  2116 |                                 read_fn = Dl_1023411011_;
1856s       |                                         ^
1856s Error: execution of an external compiler program 'gcc -c  -w -fmax-errors=3   -I/usr/lib/nim/lib -I/tmp/autopkgtest.19BS1H/autopkgtest_tmp -o /home/ubuntu/.cache/nim/test2_d/@mtest2.nim.c.o /home/ubuntu/.cache/nim/test2_d/@mtest2.nim.c' failed with exit code: 1
1856s 
1856s 
1856s autopkgtest [15:37:41]: test run-unit-test: -----------------------]
1857s autopkgtest [15:37:42]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
1857s run-unit-test        FAIL non-zero exit status 1
1857s autopkgtest [15:37:42]: @@@@@@@@@@@@@@@@@@@@ summary
1857s run-unit-test        FAIL non-zero exit status 1
1861s virt: nova [W] Skipping flock for amd64
1861s virt: Creating nova instance adt-plucky-i386-nim-hts-20241109-150645-juju-7f2275-prod-proposed-migration-environment-2-40286a29-7292-4e46-86e0-c6fa07806784 from image adt/ubuntu-plucky-amd64-server-20241108.img (UUID 8e5f101b-f604-4dd5-a1be-68c34044e0a9)...
1861s virt: nova [W] nova quota exceeded (attempt #0)
1861s virt: nova [W] nova quota exceeded (attempt #1)