0s autopkgtest [18:07:12]: starting date and time: 2025-03-15 18:07:12+0000 0s autopkgtest [18:07:12]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [18:07:12]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.n_t2h7f6/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade transrate-tools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.234 lxd-armhf-10.145.243.234:autopkgtest/ubuntu/plucky/armhf 21s autopkgtest [18:07:33]: testbed dpkg architecture: armhf 23s autopkgtest [18:07:35]: testbed apt version: 2.9.33 27s autopkgtest [18:07:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [18:07:40]: testbed release detected to be: None 36s autopkgtest [18:07:48]: updating testbed package index (apt update) 38s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 38s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 39s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 39s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 39s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 39s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 40s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 40s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 40s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 40s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 40s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 40s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 40s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 40s Get:15 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 65s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 65s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 67s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 68s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 69s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 69s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 85s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 87s Fetched 41.0 MB in 49s (834 kB/s) 89s Reading package lists... 95s autopkgtest [18:08:47]: upgrading testbed (apt dist-upgrade and autopurge) 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 98s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 98s Starting 2 pkgProblemResolver with broken count: 0 98s Done 99s Entering ResolveByKeep 99s 100s Calculating upgrade... 100s The following packages will be upgraded: 100s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 101s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Need to get 8683 kB of archives. 101s After this operation, 23.6 kB of additional disk space will be used. 101s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 104s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 104s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 108s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 109s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 109s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 109s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 110s Preconfiguring packages ... 110s Fetched 8683 kB in 9s (988 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 110s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 110s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 111s Setting up libc6:armhf (2.41-1ubuntu2) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 111s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 111s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 111s Setting up libc-bin (2.41-1ubuntu2) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 111s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 111s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 112s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 112s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 112s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 112s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 112s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 112s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 112s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 112s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 113s Setting up sos (4.9.0-5) ... 113s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 113s Setting up locales (2.41-1ubuntu2) ... 115s Generating locales (this might take a while)... 117s en_US.UTF-8... done 117s Generation complete. 117s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 118s Setting up strace (6.13+ds-1ubuntu1) ... 118s Processing triggers for man-db (2.13.0-1) ... 119s Processing triggers for systemd (257.3-1ubuntu3) ... 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 123s Solving dependencies... 124s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 126s autopkgtest [18:09:18]: rebooting testbed after setup commands that affected boot 167s autopkgtest [18:09:59]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 203s autopkgtest [18:10:35]: @@@@@@@@@@@@@@@@@@@@ apt-source transrate-tools 213s Get:1 http://ftpmaster.internal/ubuntu plucky/universe transrate-tools 1.0.0-5 (dsc) [2093 B] 213s Get:2 http://ftpmaster.internal/ubuntu plucky/universe transrate-tools 1.0.0-5 (tar) [6167 B] 213s Get:3 http://ftpmaster.internal/ubuntu plucky/universe transrate-tools 1.0.0-5 (diff) [265 kB] 213s gpgv: Signature made Fri Nov 25 21:08:23 2022 UTC 213s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 213s gpgv: issuer "tille@debian.org" 213s gpgv: Can't check signature: No public key 213s dpkg-source: warning: cannot verify inline signature for ./transrate-tools_1.0.0-5.dsc: no acceptable signature found 213s autopkgtest [18:10:45]: testing package transrate-tools version 1.0.0-5 216s autopkgtest [18:10:48]: build not needed 218s autopkgtest [18:10:50]: test run-unit-test: preparing testbed 220s Reading package lists... 220s Building dependency tree... 220s Reading state information... 221s Starting pkgProblemResolver with broken count: 0 221s Starting 2 pkgProblemResolver with broken count: 0 221s Done 222s The following NEW packages will be installed: 222s libbamtools2.5.2 transrate-tools 222s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 222s Need to get 430 kB of archives. 222s After this operation, 654 kB of additional disk space will be used. 222s Get:1 http://ftpmaster.internal/ubuntu plucky/universe armhf libbamtools2.5.2 armhf 2.5.2+dfsg-6build1 [154 kB] 223s Get:2 http://ftpmaster.internal/ubuntu plucky/universe armhf transrate-tools armhf 1.0.0-5 [276 kB] 223s Fetched 430 kB in 1s (474 kB/s) 223s Selecting previously unselected package libbamtools2.5.2:armhf. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 223s Preparing to unpack .../libbamtools2.5.2_2.5.2+dfsg-6build1_armhf.deb ... 223s Unpacking libbamtools2.5.2:armhf (2.5.2+dfsg-6build1) ... 224s Selecting previously unselected package transrate-tools. 224s Preparing to unpack .../transrate-tools_1.0.0-5_armhf.deb ... 224s Unpacking transrate-tools (1.0.0-5) ... 224s Setting up libbamtools2.5.2:armhf (2.5.2+dfsg-6build1) ... 224s Setting up transrate-tools (1.0.0-5) ... 224s Processing triggers for man-db (2.13.0-1) ... 224s Processing triggers for libc-bin (2.41-1ubuntu2) ... 234s autopkgtest [18:11:06]: test run-unit-test: [----------------------- 236s Test 1 236s name,p_seq_true,bridges,length,fragments_mapped,both_mapped,properpair,good,bases_uncovered,p_not_segmented 236s NC_045512.2,0.970787,0,29903,0,0,0,0,20434,0.983136 236s Passed 236s 236s Test 2 236s name,p_seq_true,bridges,length,fragments_mapped,both_mapped,properpair,good,bases_uncovered,p_not_segmented 236s NC_045512.2,0.937662,0,29903,0,0,0,0,26785,0.997311 236s Passed 236s 236s Test 3 236s name,p_seq_true,bridges,length,fragments_mapped,both_mapped,properpair,good,bases_uncovered,p_not_segmented 236s NC_045512.2,0.994069,0,29903,0,0,0,0,27314,0.997307 236s Passed 236s 236s Test 4 236s name,p_seq_true,bridges,length,fragments_mapped,both_mapped,properpair,good,bases_uncovered,p_not_segmented 236s NC_045512.2,0.994232,0,29903,0,0,0,0,22889,0.994879 236s Passed 236s 237s autopkgtest [18:11:08]: test run-unit-test: -----------------------] 241s autopkgtest [18:11:13]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 241s run-unit-test PASS 245s autopkgtest [18:11:17]: @@@@@@@@@@@@@@@@@@@@ summary 245s run-unit-test PASS