0s autopkgtest [17:36:54]: starting date and time: 2025-03-15 17:36:54+0000 0s autopkgtest [17:36:54]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:36:54]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.po1w5q5g/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade sickle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.197 lxd-armhf-10.145.243.197:autopkgtest/ubuntu/plucky/armhf 20s autopkgtest [17:37:14]: testbed dpkg architecture: armhf 23s autopkgtest [17:37:16]: testbed apt version: 2.9.33 30s autopkgtest [17:37:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup 32s autopkgtest [17:37:26]: testbed release detected to be: None 44s autopkgtest [17:37:38]: updating testbed package index (apt update) 46s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 46s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 47s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 47s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 47s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 47s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 47s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 48s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 48s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 48s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 48s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 48s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 48s Get:15 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 48s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 69s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 71s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 72s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 73s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 73s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 87s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 89s Fetched 41.0 MB in 43s (956 kB/s) 90s Reading package lists... 96s autopkgtest [17:38:30]: upgrading testbed (apt dist-upgrade and autopurge) 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 99s Starting 2 pkgProblemResolver with broken count: 0 99s Done 101s Entering ResolveByKeep 101s 101s Calculating upgrade... 102s The following packages will be upgraded: 102s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 102s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 102s Need to get 8683 kB of archives. 102s After this operation, 23.6 kB of additional disk space will be used. 102s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 106s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 110s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 110s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 110s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 110s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 111s Preconfiguring packages ... 112s Fetched 8683 kB in 9s (1011 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 112s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 112s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 112s Setting up libc6:armhf (2.41-1ubuntu2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 113s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 113s Setting up libc-bin (2.41-1ubuntu2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 113s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 114s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 114s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 114s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 114s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 114s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 114s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 114s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 114s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 115s Setting up sos (4.9.0-5) ... 116s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 116s Setting up locales (2.41-1ubuntu2) ... 117s Generating locales (this might take a while)... 119s en_US.UTF-8... done 119s Generation complete. 119s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 119s Setting up strace (6.13+ds-1ubuntu1) ... 119s Processing triggers for man-db (2.13.0-1) ... 121s Processing triggers for systemd (257.3-1ubuntu3) ... 123s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Starting pkgProblemResolver with broken count: 0 125s Starting 2 pkgProblemResolver with broken count: 0 125s Done 126s Solving dependencies... 127s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s autopkgtest [17:39:03]: rebooting testbed after setup commands that affected boot 169s autopkgtest [17:39:43]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 194s autopkgtest [17:40:08]: @@@@@@@@@@@@@@@@@@@@ apt-source sickle 204s Get:1 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (dsc) [2125 B] 204s Get:2 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (tar) [290 kB] 204s Get:3 http://ftpmaster.internal/ubuntu plucky/universe sickle 1.33+git20150314.f3d6ae3-2 (diff) [3968 B] 204s gpgv: Signature made Sat Jun 27 15:43:08 2020 UTC 204s gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 204s gpgv: issuer "npatra974@gmail.com" 204s gpgv: Can't check signature: No public key 204s dpkg-source: warning: cannot verify inline signature for ./sickle_1.33+git20150314.f3d6ae3-2.dsc: no acceptable signature found 204s autopkgtest [17:40:18]: testing package sickle version 1.33+git20150314.f3d6ae3-2 206s autopkgtest [17:40:20]: build not needed 209s autopkgtest [17:40:23]: test run-unit-test: preparing testbed 211s Reading package lists... 211s Building dependency tree... 211s Reading state information... 212s Starting pkgProblemResolver with broken count: 0 212s Starting 2 pkgProblemResolver with broken count: 0 212s Done 213s The following NEW packages will be installed: 213s sickle 213s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 213s Need to get 16.8 kB of archives. 213s After this operation, 39.9 kB of additional disk space will be used. 213s Get:1 http://ftpmaster.internal/ubuntu plucky/universe armhf sickle armhf 1.33+git20150314.f3d6ae3-2 [16.8 kB] 214s Fetched 16.8 kB in 0s (65.8 kB/s) 214s Selecting previously unselected package sickle. 214s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 214s Preparing to unpack .../sickle_1.33+git20150314.f3d6ae3-2_armhf.deb ... 214s Unpacking sickle (1.33+git20150314.f3d6ae3-2) ... 214s Setting up sickle (1.33+git20150314.f3d6ae3-2) ... 214s Processing triggers for man-db (2.13.0-1) ... 223s autopkgtest [17:40:37]: test run-unit-test: [----------------------- 225s Test 1 225s 225s SE input file: test.fastq 225s 225s Total FastQ records: 2500 225s FastQ records kept: 2483 225s FastQ records discarded: 17 225s 225s 225s SE input file: test.f.fastq 225s 225s Total FastQ records: 1250 225s FastQ records kept: 962 225s FastQ records discarded: 288 225s 225s 225s SE input file: test.r.fastq 225s 225s Total FastQ records: 1250 225s FastQ records kept: 1233 225s FastQ records discarded: 17 225s 225s 225s SE input file: test.fastq 225s 225s Total FastQ records: 2500 225s FastQ records kept: 2500 225s FastQ records discarded: 0 225s 225s PASS 225s 225s Test 2 225s Warning: PE file 2 is shorter than PE file 1. Disregarding rest of PE file 1. 225s 225s PE forward file: test.fastq 225s PE reverse file: test.r.fastq 225s 225s Total input FastQ records: 2500 (1250 pairs) 225s 225s FastQ paired records kept: 2500 (1250 pairs) 225s FastQ single records kept: 0 (from PE1: 0, from PE2: 0) 225s FastQ paired records discarded: 0 (0 pairs) 225s FastQ single records discarded: 0 (from PE1: 0, from PE2: 0) 225s 225s PASS 225s autopkgtest [17:40:39]: test run-unit-test: -----------------------] 229s autopkgtest [17:40:43]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 229s run-unit-test PASS 233s autopkgtest [17:40:47]: @@@@@@@@@@@@@@@@@@@@ summary 233s run-unit-test PASS