0s autopkgtest [16:39:08]: starting date and time: 2025-03-15 16:39:08+0000 0s autopkgtest [16:39:08]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:39:08]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5w8otw3v/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-spam --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.171 lxd-armhf-10.145.243.171:autopkgtest/ubuntu/plucky/armhf 20s autopkgtest [16:39:28]: testbed dpkg architecture: armhf 21s autopkgtest [16:39:29]: testbed apt version: 2.9.33 25s autopkgtest [16:39:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 27s autopkgtest [16:39:35]: testbed release detected to be: None 35s autopkgtest [16:39:43]: updating testbed package index (apt update) 37s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 37s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 38s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 38s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 38s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 38s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 38s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 39s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 39s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 39s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 39s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 39s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 39s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 39s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 39s Get:15 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 39s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 63s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 64s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 66s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 66s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 66s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 82s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 84s Fetched 41.0 MB in 47s (869 kB/s) 86s Reading package lists... 91s autopkgtest [16:40:39]: upgrading testbed (apt dist-upgrade and autopurge) 93s Reading package lists... 94s Building dependency tree... 94s Reading state information... 95s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 95s Starting 2 pkgProblemResolver with broken count: 0 95s Done 96s Entering ResolveByKeep 97s 97s Calculating upgrade... 98s The following packages will be upgraded: 98s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 98s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Need to get 8683 kB of archives. 98s After this operation, 23.6 kB of additional disk space will be used. 98s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 101s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 102s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 107s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 107s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 107s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 108s Preconfiguring packages ... 108s Fetched 8683 kB in 9s (947 kB/s) 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 108s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 108s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 109s Setting up libc6:armhf (2.41-1ubuntu2) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 109s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 109s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 109s Setting up libc-bin (2.41-1ubuntu2) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 109s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 109s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 110s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 110s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 110s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 110s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 110s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 110s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 110s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 111s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 111s Setting up sos (4.9.0-5) ... 112s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 112s Setting up locales (2.41-1ubuntu2) ... 113s Generating locales (this might take a while)... 117s en_US.UTF-8... done 117s Generation complete. 117s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 117s Setting up strace (6.13+ds-1ubuntu1) ... 117s Processing triggers for man-db (2.13.0-1) ... 119s Processing triggers for systemd (257.3-1ubuntu3) ... 121s Reading package lists... 122s Building dependency tree... 122s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 124s Solving dependencies... 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s autopkgtest [16:41:15]: rebooting testbed after setup commands that affected boot 167s autopkgtest [16:41:55]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 191s autopkgtest [16:42:19]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-spam 202s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spam 2.11-1-1 (dsc) [2214 B] 202s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spam 2.11-1-1 (tar) [1813 kB] 202s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-spam 2.11-1-1 (diff) [4652 B] 203s gpgv: Signature made Mon Jan 27 23:51:25 2025 UTC 203s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 203s gpgv: issuer "plessy@debian.org" 203s gpgv: Can't check signature: No public key 203s dpkg-source: warning: cannot verify inline signature for ./r-cran-spam_2.11-1-1.dsc: no acceptable signature found 203s autopkgtest [16:42:31]: testing package r-cran-spam version 2.11-1-1 205s autopkgtest [16:42:33]: build not needed 208s autopkgtest [16:42:36]: test run-unit-test: preparing testbed 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 211s Starting pkgProblemResolver with broken count: 0 211s Starting 2 pkgProblemResolver with broken count: 0 211s Done 212s The following NEW packages will be installed: 212s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 212s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax 212s javascript-common libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1 212s libfreetype6 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 212s libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3 212s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 212s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 212s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 212s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4 212s liblua5.4-0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 212s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 212s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 212s libxft2 libxrender1 libxss1 libxt6t64 littler node-bootstrap-sass 212s node-html5shiv node-normalize.css pandoc pandoc-data r-base-core 212s r-cran-base64enc r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr 212s r-cran-cli r-cran-commonmark r-cran-crayon r-cran-desc r-cran-diffobj 212s r-cran-digest r-cran-dotcall64 r-cran-evaluate r-cran-evd r-cran-fastmap 212s r-cran-fields r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr 212s r-cran-htmltools r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr 212s r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr 212s r-cran-maps r-cran-matrix r-cran-memoise r-cran-mime r-cran-pkgbuild 212s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx 212s r-cran-promises r-cran-ps r-cran-r.cache r-cran-r.methodss3 r-cran-r.oo 212s r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcpp 212s r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-sass r-cran-shiny 212s r-cran-sourcetools r-cran-spam r-cran-testthat r-cran-tinytex 212s r-cran-truncdist r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun 212s r-cran-xtable r-cran-yaml tcl tcl8.6 unzip x11-common xdg-utils zip 213s 0 upgraded, 140 newly installed, 0 to remove and 0 not upgraded. 213s Need to get 134 MB of archives. 213s After this operation, 471 MB of additional disk space will be used. 213s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 213s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 214s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 215s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 215s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 215s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 215s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 216s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 216s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 218s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf javascript-common all 12 [5216 B] 218s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 218s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 218s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 218s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 218s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 218s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 219s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 219s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 219s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 219s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 219s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 219s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 220s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 220s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 220s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 220s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 220s Get:27 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 220s Get:28 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 220s Get:29 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 220s Get:30 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-d3 all 3.5.17-4 [132 kB] 221s Get:31 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] 221s Get:32 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 221s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 221s Get:34 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 221s Get:35 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 221s Get:36 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 221s Get:37 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 222s Get:38 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 222s Get:39 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 222s Get:40 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 222s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 224s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 224s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf liblua5.4-0 armhf 5.4.7-1 [134 kB] 224s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libthai-data all 0.1.29-2build1 [158 kB] 224s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 224s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libpango-1.0-0 armhf 1.56.2-1 [216 kB] 224s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf libpangoft2-1.0-0 armhf 1.56.2-1 [43.6 kB] 224s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf libpangocairo-1.0-0 armhf 1.56.2-1 [25.1 kB] 224s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper2 armhf 2.2.5-0.3 [16.3 kB] 224s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper-utils armhf 2.2.5-0.3 [14.2 kB] 224s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 224s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 224s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 225s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 225s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 225s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 226s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 226s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 226s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 226s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 226s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf zip armhf 3.0-14ubuntu2 [164 kB] 227s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf unzip armhf 6.0-28ubuntu6 [167 kB] 227s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 227s Get:64 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-core armhf 4.4.3-1 [28.2 MB] 252s Get:65 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-littler armhf 0.3.20-2 [90.9 kB] 252s Get:66 http://ftpmaster.internal/ubuntu plucky/universe armhf littler all 0.3.20-2 [2554 B] 252s Get:67 http://ftpmaster.internal/ubuntu plucky/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] 252s Get:68 http://ftpmaster.internal/ubuntu plucky/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 252s Get:69 http://ftpmaster.internal/ubuntu plucky/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] 252s Get:70 http://ftpmaster.internal/ubuntu plucky/universe armhf pandoc-data all 3.1.11.1-3build1 [78.8 kB] 252s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf pandoc armhf 3.1.11.1+ds-2 [36.7 MB] 287s Get:72 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] 287s Get:73 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-brio armhf 1.1.5-1 [37.9 kB] 287s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rlang armhf 1.1.5-1 [1701 kB] 288s Get:75 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fastmap armhf 1.2.0-1 [69.8 kB] 288s Get:76 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-cachem armhf 1.1.0-1 [73.8 kB] 288s Get:77 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-digest armhf 0.6.37-1 [207 kB] 289s Get:78 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-htmltools armhf 0.5.8.1-1 [372 kB] 289s Get:79 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 289s Get:80 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-jsonlite armhf 1.9.1+dfsg-1 [440 kB] 289s Get:81 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-cli armhf 3.6.4-1 [1377 kB] 291s Get:82 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-glue armhf 1.8.0-1 [162 kB] 291s Get:83 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 291s Get:84 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] 291s Get:85 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mime armhf 0.12-2 [35.5 kB] 291s Get:86 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fs armhf 1.6.5+dfsg-1 [242 kB] 291s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r6 all 2.6.1-1 [101 kB] 291s Get:88 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] 291s Get:89 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-sass armhf 0.4.9+dfsg-1 [926 kB] 292s Get:90 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 297s Get:91 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-ps armhf 1.9.0-1 [403 kB] 297s Get:92 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-processx armhf 3.8.6-1 [359 kB] 298s Get:93 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-callr all 3.7.6-1 [458 kB] 298s Get:94 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-commonmark armhf 1.9.2-2 [112 kB] 298s Get:95 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-crayon all 1.5.3-1 [165 kB] 298s Get:96 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-desc all 1.4.3-1 [359 kB] 299s Get:97 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-diffobj armhf 0.3.5-1 [1115 kB] 300s Get:98 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-dotcall64 armhf 1.2-1 [36.5 kB] 300s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-evaluate all 1.0.3-1 [114 kB] 300s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-evd armhf 2.3-7.1-1 [1666 kB] 302s Get:101 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 302s Get:102 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rcpp armhf 1.0.14-1 [1976 kB] 304s Get:103 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-spam armhf 2.11-1-1 [2730 kB] 307s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] 309s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-maps armhf 3.4.2.1-1 [2348 kB] 311s Get:106 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fields armhf 16.3.1-1 [3760 kB] 316s Get:107 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fontawesome all 0.5.3-1 [1331 kB] 317s Get:108 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-xfun armhf 0.51+dfsg-1 [573 kB] 318s Get:109 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-highr all 0.11+dfsg-1 [38.5 kB] 318s Get:110 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-later armhf 1.4.1+dfsg-1 [141 kB] 318s Get:111 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] 318s Get:112 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-promises armhf 1.3.2+dfsg-1 [288 kB] 319s Get:113 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-httpuv armhf 1.6.15+dfsg-1 [480 kB] 319s Get:114 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-yaml armhf 2.3.10-1 [101 kB] 319s Get:115 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 325s Get:116 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-knitr all 1.49+dfsg-1 [859 kB] 326s Get:117 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 327s Get:118 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-matrix armhf 1.7-3-1 [4039 kB] 331s Get:119 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgbuild all 1.4.6-1 [213 kB] 332s Get:120 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rprojroot all 2.0.4-2 [125 kB] 332s Get:121 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-withr all 3.0.2+dfsg-1 [214 kB] 332s Get:122 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgload all 1.4.0-1 [247 kB] 332s Get:123 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-praise all 1.0.0-4build1 [20.3 kB] 332s Get:124 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 332s Get:125 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r.oo all 1.27.0-1 [979 kB] 333s Get:126 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r.utils all 2.13.0-1 [1423 kB] 335s Get:127 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r.cache all 0.16.0-1 [113 kB] 335s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf tcl8.6 armhf 8.6.16+dfsg-1 [14.6 kB] 335s Get:129 http://ftpmaster.internal/ubuntu plucky/main armhf tcl armhf 8.6.14build1 [4124 B] 335s Get:130 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r.rsp all 0.46.0+ds-1 [1412 kB] 337s Get:131 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-tinytex all 0.56-1 [148 kB] 337s Get:132 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-modernizr all 3.13.0-0.1 [101 kB] 337s Get:133 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] 338s Get:134 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] 338s Get:135 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 338s Get:136 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 341s Get:137 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 343s Get:138 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-waldo all 0.6.1-2 [150 kB] 343s Get:139 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-testthat armhf 3.2.3-1 [1633 kB] 345s Get:140 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-truncdist all 1.0-2-4build1 [34.6 kB] 346s Preconfiguring packages ... 346s Fetched 134 MB in 2min 13s (1012 kB/s) 346s Selecting previously unselected package libfreetype6:armhf. 346s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 346s Preparing to unpack .../000-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 346s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 346s Selecting previously unselected package fonts-dejavu-mono. 346s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 346s Unpacking fonts-dejavu-mono (2.37-8) ... 346s Selecting previously unselected package fonts-dejavu-core. 346s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 346s Unpacking fonts-dejavu-core (2.37-8) ... 346s Selecting previously unselected package fontconfig-config. 346s Preparing to unpack .../003-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 346s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 346s Selecting previously unselected package libfontconfig1:armhf. 346s Preparing to unpack .../004-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 346s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 346s Selecting previously unselected package fontconfig. 346s Preparing to unpack .../005-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 346s Unpacking fontconfig (2.15.0-2ubuntu1) ... 346s Selecting previously unselected package fonts-font-awesome. 347s Preparing to unpack .../006-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 347s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 347s Selecting previously unselected package fonts-glyphicons-halflings. 347s Preparing to unpack .../007-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 347s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 347s Selecting previously unselected package fonts-mathjax. 347s Preparing to unpack .../008-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 347s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 348s Selecting previously unselected package javascript-common. 348s Preparing to unpack .../009-javascript-common_12_all.deb ... 348s Unpacking javascript-common (12) ... 348s Selecting previously unselected package libblas3:armhf. 348s Preparing to unpack .../010-libblas3_3.12.1-2_armhf.deb ... 348s Unpacking libblas3:armhf (3.12.1-2) ... 348s Selecting previously unselected package libpixman-1-0:armhf. 348s Preparing to unpack .../011-libpixman-1-0_0.44.0-3_armhf.deb ... 348s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 348s Selecting previously unselected package libxcb-render0:armhf. 348s Preparing to unpack .../012-libxcb-render0_1.17.0-2_armhf.deb ... 348s Unpacking libxcb-render0:armhf (1.17.0-2) ... 348s Selecting previously unselected package libxcb-shm0:armhf. 348s Preparing to unpack .../013-libxcb-shm0_1.17.0-2_armhf.deb ... 348s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 348s Selecting previously unselected package libxrender1:armhf. 348s Preparing to unpack .../014-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 348s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 348s Selecting previously unselected package libcairo2:armhf. 348s Preparing to unpack .../015-libcairo2_1.18.2-2_armhf.deb ... 348s Unpacking libcairo2:armhf (1.18.2-2) ... 348s Selecting previously unselected package libdatrie1:armhf. 348s Preparing to unpack .../016-libdatrie1_0.2.13-3build1_armhf.deb ... 348s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 348s Selecting previously unselected package libdeflate0:armhf. 348s Preparing to unpack .../017-libdeflate0_1.23-1_armhf.deb ... 348s Unpacking libdeflate0:armhf (1.23-1) ... 348s Selecting previously unselected package libgfortran5:armhf. 348s Preparing to unpack .../018-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 348s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 348s Selecting previously unselected package libgomp1:armhf. 348s Preparing to unpack .../019-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 348s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 348s Selecting previously unselected package libgraphite2-3:armhf. 348s Preparing to unpack .../020-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 348s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 348s Selecting previously unselected package libharfbuzz0b:armhf. 348s Preparing to unpack .../021-libharfbuzz0b_10.2.0-1_armhf.deb ... 348s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 348s Selecting previously unselected package x11-common. 348s Preparing to unpack .../022-x11-common_1%3a7.7+23ubuntu3_all.deb ... 348s Unpacking x11-common (1:7.7+23ubuntu3) ... 348s Selecting previously unselected package libice6:armhf. 348s Preparing to unpack .../023-libice6_2%3a1.1.1-1_armhf.deb ... 348s Unpacking libice6:armhf (2:1.1.1-1) ... 348s Selecting previously unselected package libjpeg-turbo8:armhf. 348s Preparing to unpack .../024-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 348s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 348s Selecting previously unselected package libjpeg8:armhf. 348s Preparing to unpack .../025-libjpeg8_8c-2ubuntu11_armhf.deb ... 348s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 348s Selecting previously unselected package libjs-bootstrap. 348s Preparing to unpack .../026-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 348s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 348s Selecting previously unselected package libjs-popper.js. 348s Preparing to unpack .../027-libjs-popper.js_1.16.1+ds-6_all.deb ... 348s Unpacking libjs-popper.js (1.16.1+ds-6) ... 348s Selecting previously unselected package libjs-bootstrap4. 348s Preparing to unpack .../028-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 348s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 348s Selecting previously unselected package libjs-d3. 348s Preparing to unpack .../029-libjs-d3_3.5.17-4_all.deb ... 348s Unpacking libjs-d3 (3.5.17-4) ... 348s Selecting previously unselected package libjs-es5-shim. 348s Preparing to unpack .../030-libjs-es5-shim_4.6.7-2_all.deb ... 348s Unpacking libjs-es5-shim (4.6.7-2) ... 348s Selecting previously unselected package libjs-highlight.js. 348s Preparing to unpack .../031-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 348s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 348s Selecting previously unselected package libjs-jquery. 348s Preparing to unpack .../032-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 348s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 348s Selecting previously unselected package libjs-jquery-datatables. 348s Preparing to unpack .../033-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 348s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 348s Selecting previously unselected package libjs-sifter.js. 348s Preparing to unpack .../034-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 348s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 348s Selecting previously unselected package libjs-microplugin.js. 349s Preparing to unpack .../035-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 349s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 349s Selecting previously unselected package libjs-jquery-selectize.js. 349s Preparing to unpack .../036-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 349s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 349s Selecting previously unselected package libjs-jquery-ui. 349s Preparing to unpack .../037-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 349s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 349s Selecting previously unselected package libjs-json. 349s Preparing to unpack .../038-libjs-json_0~20221030+~1.0.8-1_all.deb ... 349s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 349s Selecting previously unselected package libjs-prettify. 349s Preparing to unpack .../039-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 349s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 349s Selecting previously unselected package liblapack3:armhf. 349s Preparing to unpack .../040-liblapack3_3.12.1-2_armhf.deb ... 349s Unpacking liblapack3:armhf (3.12.1-2) ... 349s Selecting previously unselected package liblerc4:armhf. 349s Preparing to unpack .../041-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 349s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 349s Selecting previously unselected package liblua5.4-0:armhf. 349s Preparing to unpack .../042-liblua5.4-0_5.4.7-1_armhf.deb ... 349s Unpacking liblua5.4-0:armhf (5.4.7-1) ... 349s Selecting previously unselected package libthai-data. 349s Preparing to unpack .../043-libthai-data_0.1.29-2build1_all.deb ... 349s Unpacking libthai-data (0.1.29-2build1) ... 349s Selecting previously unselected package libthai0:armhf. 349s Preparing to unpack .../044-libthai0_0.1.29-2build1_armhf.deb ... 349s Unpacking libthai0:armhf (0.1.29-2build1) ... 349s Selecting previously unselected package libpango-1.0-0:armhf. 349s Preparing to unpack .../045-libpango-1.0-0_1.56.2-1_armhf.deb ... 349s Unpacking libpango-1.0-0:armhf (1.56.2-1) ... 349s Selecting previously unselected package libpangoft2-1.0-0:armhf. 349s Preparing to unpack .../046-libpangoft2-1.0-0_1.56.2-1_armhf.deb ... 349s Unpacking libpangoft2-1.0-0:armhf (1.56.2-1) ... 349s Selecting previously unselected package libpangocairo-1.0-0:armhf. 349s Preparing to unpack .../047-libpangocairo-1.0-0_1.56.2-1_armhf.deb ... 349s Unpacking libpangocairo-1.0-0:armhf (1.56.2-1) ... 349s Selecting previously unselected package libpaper2:armhf. 349s Preparing to unpack .../048-libpaper2_2.2.5-0.3_armhf.deb ... 349s Unpacking libpaper2:armhf (2.2.5-0.3) ... 349s Selecting previously unselected package libpaper-utils. 350s Preparing to unpack .../049-libpaper-utils_2.2.5-0.3_armhf.deb ... 350s Unpacking libpaper-utils (2.2.5-0.3) ... 350s Selecting previously unselected package libsharpyuv0:armhf. 350s Preparing to unpack .../050-libsharpyuv0_1.5.0-0.1_armhf.deb ... 350s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 350s Selecting previously unselected package libsm6:armhf. 350s Preparing to unpack .../051-libsm6_2%3a1.2.4-1_armhf.deb ... 350s Unpacking libsm6:armhf (2:1.2.4-1) ... 350s Selecting previously unselected package libtcl8.6:armhf. 350s Preparing to unpack .../052-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 350s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 350s Selecting previously unselected package libjbig0:armhf. 350s Preparing to unpack .../053-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 350s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 350s Selecting previously unselected package libwebp7:armhf. 350s Preparing to unpack .../054-libwebp7_1.5.0-0.1_armhf.deb ... 350s Unpacking libwebp7:armhf (1.5.0-0.1) ... 350s Selecting previously unselected package libtiff6:armhf. 350s Preparing to unpack .../055-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 350s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 350s Selecting previously unselected package libxft2:armhf. 350s Preparing to unpack .../056-libxft2_2.3.6-1build1_armhf.deb ... 350s Unpacking libxft2:armhf (2.3.6-1build1) ... 350s Selecting previously unselected package libxss1:armhf. 350s Preparing to unpack .../057-libxss1_1%3a1.2.3-1build3_armhf.deb ... 350s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 350s Selecting previously unselected package libtk8.6:armhf. 350s Preparing to unpack .../058-libtk8.6_8.6.16-1_armhf.deb ... 350s Unpacking libtk8.6:armhf (8.6.16-1) ... 350s Selecting previously unselected package libxt6t64:armhf. 350s Preparing to unpack .../059-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 350s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 350s Selecting previously unselected package zip. 350s Preparing to unpack .../060-zip_3.0-14ubuntu2_armhf.deb ... 350s Unpacking zip (3.0-14ubuntu2) ... 350s Selecting previously unselected package unzip. 350s Preparing to unpack .../061-unzip_6.0-28ubuntu6_armhf.deb ... 350s Unpacking unzip (6.0-28ubuntu6) ... 350s Selecting previously unselected package xdg-utils. 350s Preparing to unpack .../062-xdg-utils_1.2.1-2ubuntu1_all.deb ... 350s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 350s Selecting previously unselected package r-base-core. 351s Preparing to unpack .../063-r-base-core_4.4.3-1_armhf.deb ... 351s Unpacking r-base-core (4.4.3-1) ... 351s Selecting previously unselected package r-cran-littler. 351s Preparing to unpack .../064-r-cran-littler_0.3.20-2_armhf.deb ... 351s Unpacking r-cran-littler (0.3.20-2) ... 351s Selecting previously unselected package littler. 351s Preparing to unpack .../065-littler_0.3.20-2_all.deb ... 351s Unpacking littler (0.3.20-2) ... 351s Selecting previously unselected package node-bootstrap-sass. 351s Preparing to unpack .../066-node-bootstrap-sass_3.4.3-2_all.deb ... 351s Unpacking node-bootstrap-sass (3.4.3-2) ... 351s Selecting previously unselected package node-html5shiv. 351s Preparing to unpack .../067-node-html5shiv_3.7.3+dfsg-5_all.deb ... 351s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 351s Selecting previously unselected package node-normalize.css. 351s Preparing to unpack .../068-node-normalize.css_8.0.1-5_all.deb ... 351s Unpacking node-normalize.css (8.0.1-5) ... 351s Selecting previously unselected package pandoc-data. 351s Preparing to unpack .../069-pandoc-data_3.1.11.1-3build1_all.deb ... 351s Unpacking pandoc-data (3.1.11.1-3build1) ... 352s Selecting previously unselected package pandoc. 352s Preparing to unpack .../070-pandoc_3.1.11.1+ds-2_armhf.deb ... 352s Unpacking pandoc (3.1.11.1+ds-2) ... 353s Selecting previously unselected package r-cran-base64enc. 353s Preparing to unpack .../071-r-cran-base64enc_0.1-3-3_armhf.deb ... 353s Unpacking r-cran-base64enc (0.1-3-3) ... 353s Selecting previously unselected package r-cran-brio. 353s Preparing to unpack .../072-r-cran-brio_1.1.5-1_armhf.deb ... 353s Unpacking r-cran-brio (1.1.5-1) ... 353s Selecting previously unselected package r-cran-rlang. 354s Preparing to unpack .../073-r-cran-rlang_1.1.5-1_armhf.deb ... 354s Unpacking r-cran-rlang (1.1.5-1) ... 354s Selecting previously unselected package r-cran-fastmap. 354s Preparing to unpack .../074-r-cran-fastmap_1.2.0-1_armhf.deb ... 354s Unpacking r-cran-fastmap (1.2.0-1) ... 354s Selecting previously unselected package r-cran-cachem. 354s Preparing to unpack .../075-r-cran-cachem_1.1.0-1_armhf.deb ... 354s Unpacking r-cran-cachem (1.1.0-1) ... 354s Selecting previously unselected package r-cran-digest. 354s Preparing to unpack .../076-r-cran-digest_0.6.37-1_armhf.deb ... 354s Unpacking r-cran-digest (0.6.37-1) ... 354s Selecting previously unselected package r-cran-htmltools. 354s Preparing to unpack .../077-r-cran-htmltools_0.5.8.1-1_armhf.deb ... 354s Unpacking r-cran-htmltools (0.5.8.1-1) ... 354s Selecting previously unselected package r-cran-jquerylib. 354s Preparing to unpack .../078-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 354s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 354s Selecting previously unselected package r-cran-jsonlite. 354s Preparing to unpack .../079-r-cran-jsonlite_1.9.1+dfsg-1_armhf.deb ... 354s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 354s Selecting previously unselected package r-cran-cli. 354s Preparing to unpack .../080-r-cran-cli_3.6.4-1_armhf.deb ... 354s Unpacking r-cran-cli (3.6.4-1) ... 354s Selecting previously unselected package r-cran-glue. 354s Preparing to unpack .../081-r-cran-glue_1.8.0-1_armhf.deb ... 354s Unpacking r-cran-glue (1.8.0-1) ... 354s Selecting previously unselected package r-cran-lifecycle. 354s Preparing to unpack .../082-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 354s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 354s Selecting previously unselected package r-cran-memoise. 354s Preparing to unpack .../083-r-cran-memoise_2.0.1-1_all.deb ... 354s Unpacking r-cran-memoise (2.0.1-1) ... 355s Selecting previously unselected package r-cran-mime. 355s Preparing to unpack .../084-r-cran-mime_0.12-2_armhf.deb ... 355s Unpacking r-cran-mime (0.12-2) ... 355s Selecting previously unselected package r-cran-fs. 355s Preparing to unpack .../085-r-cran-fs_1.6.5+dfsg-1_armhf.deb ... 355s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 355s Selecting previously unselected package r-cran-r6. 355s Preparing to unpack .../086-r-cran-r6_2.6.1-1_all.deb ... 355s Unpacking r-cran-r6 (2.6.1-1) ... 355s Selecting previously unselected package r-cran-rappdirs. 355s Preparing to unpack .../087-r-cran-rappdirs_0.3.3-1_armhf.deb ... 355s Unpacking r-cran-rappdirs (0.3.3-1) ... 355s Selecting previously unselected package r-cran-sass. 355s Preparing to unpack .../088-r-cran-sass_0.4.9+dfsg-1_armhf.deb ... 355s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 355s Selecting previously unselected package r-cran-bslib. 355s Preparing to unpack .../089-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 355s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 355s Selecting previously unselected package r-cran-ps. 355s Preparing to unpack .../090-r-cran-ps_1.9.0-1_armhf.deb ... 355s Unpacking r-cran-ps (1.9.0-1) ... 355s Selecting previously unselected package r-cran-processx. 355s Preparing to unpack .../091-r-cran-processx_3.8.6-1_armhf.deb ... 355s Unpacking r-cran-processx (3.8.6-1) ... 355s Selecting previously unselected package r-cran-callr. 355s Preparing to unpack .../092-r-cran-callr_3.7.6-1_all.deb ... 355s Unpacking r-cran-callr (3.7.6-1) ... 355s Selecting previously unselected package r-cran-commonmark. 356s Preparing to unpack .../093-r-cran-commonmark_1.9.2-2_armhf.deb ... 356s Unpacking r-cran-commonmark (1.9.2-2) ... 356s Selecting previously unselected package r-cran-crayon. 356s Preparing to unpack .../094-r-cran-crayon_1.5.3-1_all.deb ... 356s Unpacking r-cran-crayon (1.5.3-1) ... 356s Selecting previously unselected package r-cran-desc. 356s Preparing to unpack .../095-r-cran-desc_1.4.3-1_all.deb ... 356s Unpacking r-cran-desc (1.4.3-1) ... 356s Selecting previously unselected package r-cran-diffobj. 356s Preparing to unpack .../096-r-cran-diffobj_0.3.5-1_armhf.deb ... 356s Unpacking r-cran-diffobj (0.3.5-1) ... 356s Selecting previously unselected package r-cran-dotcall64. 356s Preparing to unpack .../097-r-cran-dotcall64_1.2-1_armhf.deb ... 356s Unpacking r-cran-dotcall64 (1.2-1) ... 356s Selecting previously unselected package r-cran-evaluate. 356s Preparing to unpack .../098-r-cran-evaluate_1.0.3-1_all.deb ... 356s Unpacking r-cran-evaluate (1.0.3-1) ... 356s Selecting previously unselected package r-cran-evd. 356s Preparing to unpack .../099-r-cran-evd_2.3-7.1-1_armhf.deb ... 356s Unpacking r-cran-evd (2.3-7.1-1) ... 356s Selecting previously unselected package r-cran-pkgkitten. 356s Preparing to unpack .../100-r-cran-pkgkitten_0.2.4-1_all.deb ... 356s Unpacking r-cran-pkgkitten (0.2.4-1) ... 356s Selecting previously unselected package r-cran-rcpp. 356s Preparing to unpack .../101-r-cran-rcpp_1.0.14-1_armhf.deb ... 356s Unpacking r-cran-rcpp (1.0.14-1) ... 356s Selecting previously unselected package r-cran-spam. 356s Preparing to unpack .../102-r-cran-spam_2.11-1-1_armhf.deb ... 356s Unpacking r-cran-spam (2.11-1-1) ... 357s Selecting previously unselected package r-cran-viridislite. 357s Preparing to unpack .../103-r-cran-viridislite_0.4.2-2_all.deb ... 357s Unpacking r-cran-viridislite (0.4.2-2) ... 357s Selecting previously unselected package r-cran-maps. 357s Preparing to unpack .../104-r-cran-maps_3.4.2.1-1_armhf.deb ... 357s Unpacking r-cran-maps (3.4.2.1-1) ... 357s Selecting previously unselected package r-cran-fields. 357s Preparing to unpack .../105-r-cran-fields_16.3.1-1_armhf.deb ... 357s Unpacking r-cran-fields (16.3.1-1) ... 357s Selecting previously unselected package r-cran-fontawesome. 357s Preparing to unpack .../106-r-cran-fontawesome_0.5.3-1_all.deb ... 357s Unpacking r-cran-fontawesome (0.5.3-1) ... 357s Selecting previously unselected package r-cran-xfun. 357s Preparing to unpack .../107-r-cran-xfun_0.51+dfsg-1_armhf.deb ... 357s Unpacking r-cran-xfun (0.51+dfsg-1) ... 357s Selecting previously unselected package r-cran-highr. 357s Preparing to unpack .../108-r-cran-highr_0.11+dfsg-1_all.deb ... 357s Unpacking r-cran-highr (0.11+dfsg-1) ... 357s Selecting previously unselected package r-cran-later. 357s Preparing to unpack .../109-r-cran-later_1.4.1+dfsg-1_armhf.deb ... 357s Unpacking r-cran-later (1.4.1+dfsg-1) ... 357s Selecting previously unselected package r-cran-magrittr. 357s Preparing to unpack .../110-r-cran-magrittr_2.0.3-1_armhf.deb ... 357s Unpacking r-cran-magrittr (2.0.3-1) ... 357s Selecting previously unselected package r-cran-promises. 357s Preparing to unpack .../111-r-cran-promises_1.3.2+dfsg-1_armhf.deb ... 357s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 357s Selecting previously unselected package r-cran-httpuv. 358s Preparing to unpack .../112-r-cran-httpuv_1.6.15+dfsg-1_armhf.deb ... 358s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 358s Selecting previously unselected package r-cran-yaml. 358s Preparing to unpack .../113-r-cran-yaml_2.3.10-1_armhf.deb ... 358s Unpacking r-cran-yaml (2.3.10-1) ... 358s Selecting previously unselected package libjs-mathjax. 358s Preparing to unpack .../114-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 358s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 359s Selecting previously unselected package r-cran-knitr. 359s Preparing to unpack .../115-r-cran-knitr_1.49+dfsg-1_all.deb ... 359s Unpacking r-cran-knitr (1.49+dfsg-1) ... 359s Selecting previously unselected package r-cran-lattice. 359s Preparing to unpack .../116-r-cran-lattice_0.22-6-1_armhf.deb ... 359s Unpacking r-cran-lattice (0.22-6-1) ... 359s Selecting previously unselected package r-cran-matrix. 359s Preparing to unpack .../117-r-cran-matrix_1.7-3-1_armhf.deb ... 359s Unpacking r-cran-matrix (1.7-3-1) ... 359s Selecting previously unselected package r-cran-pkgbuild. 359s Preparing to unpack .../118-r-cran-pkgbuild_1.4.6-1_all.deb ... 359s Unpacking r-cran-pkgbuild (1.4.6-1) ... 359s Selecting previously unselected package r-cran-rprojroot. 359s Preparing to unpack .../119-r-cran-rprojroot_2.0.4-2_all.deb ... 359s Unpacking r-cran-rprojroot (2.0.4-2) ... 359s Selecting previously unselected package r-cran-withr. 359s Preparing to unpack .../120-r-cran-withr_3.0.2+dfsg-1_all.deb ... 359s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 359s Selecting previously unselected package r-cran-pkgload. 359s Preparing to unpack .../121-r-cran-pkgload_1.4.0-1_all.deb ... 359s Unpacking r-cran-pkgload (1.4.0-1) ... 360s Selecting previously unselected package r-cran-praise. 360s Preparing to unpack .../122-r-cran-praise_1.0.0-4build1_all.deb ... 360s Unpacking r-cran-praise (1.0.0-4build1) ... 360s Selecting previously unselected package r-cran-r.methodss3. 360s Preparing to unpack .../123-r-cran-r.methodss3_1.8.2-1_all.deb ... 360s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 360s Selecting previously unselected package r-cran-r.oo. 360s Preparing to unpack .../124-r-cran-r.oo_1.27.0-1_all.deb ... 360s Unpacking r-cran-r.oo (1.27.0-1) ... 360s Selecting previously unselected package r-cran-r.utils. 360s Preparing to unpack .../125-r-cran-r.utils_2.13.0-1_all.deb ... 360s Unpacking r-cran-r.utils (2.13.0-1) ... 360s Selecting previously unselected package r-cran-r.cache. 360s Preparing to unpack .../126-r-cran-r.cache_0.16.0-1_all.deb ... 360s Unpacking r-cran-r.cache (0.16.0-1) ... 360s Selecting previously unselected package tcl8.6. 360s Preparing to unpack .../127-tcl8.6_8.6.16+dfsg-1_armhf.deb ... 360s Unpacking tcl8.6 (8.6.16+dfsg-1) ... 360s Selecting previously unselected package tcl. 360s Preparing to unpack .../128-tcl_8.6.14build1_armhf.deb ... 360s Unpacking tcl (8.6.14build1) ... 360s Selecting previously unselected package r-cran-r.rsp. 360s Preparing to unpack .../129-r-cran-r.rsp_0.46.0+ds-1_all.deb ... 360s Unpacking r-cran-r.rsp (0.46.0+ds-1) ... 360s Selecting previously unselected package r-cran-tinytex. 360s Preparing to unpack .../130-r-cran-tinytex_0.56-1_all.deb ... 360s Unpacking r-cran-tinytex (0.56-1) ... 360s Selecting previously unselected package libjs-modernizr. 360s Preparing to unpack .../131-libjs-modernizr_3.13.0-0.1_all.deb ... 360s Unpacking libjs-modernizr (3.13.0-0.1) ... 360s Selecting previously unselected package r-cran-xtable. 360s Preparing to unpack .../132-r-cran-xtable_1%3a1.8-4-2_all.deb ... 360s Unpacking r-cran-xtable (1:1.8-4-2) ... 360s Selecting previously unselected package r-cran-sourcetools. 361s Preparing to unpack .../133-r-cran-sourcetools_0.1.7-1-1_armhf.deb ... 361s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 361s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 361s Preparing to unpack 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Unpacking r-cran-truncdist (1.0-2-4build1) ... 361s Setting up libjs-json (0~20221030+~1.0.8-1) ... 361s Setting up javascript-common (12) ... 361s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 361s Setting up libpixman-1-0:armhf (0.44.0-3) ... 361s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 361s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 361s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 361s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 361s Setting up libxrender1:armhf (1:0.9.10-1.1build1) ... 362s Setting up libdatrie1:armhf (0.2.13-3build1) ... 362s Setting up libjs-popper.js (1.16.1+ds-6) ... 362s Setting up libxcb-render0:armhf (1.17.0-2) ... 362s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 362s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 362s Setting up unzip (6.0-28ubuntu6) ... 362s Setting up x11-common (1:7.7+23ubuntu3) ... 362s Setting up node-html5shiv (3.7.3+dfsg-5) ... 362s Setting up libdeflate0:armhf (1.23-1) ... 362s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 362s Setting up libxcb-shm0:armhf (1.17.0-2) ... 362s Setting up libgomp1:armhf (15-20250222-0ubuntu1) ... 362s Setting up libjs-modernizr (3.13.0-0.1) ... 362s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 362s Setting up libjs-es5-shim (4.6.7-2) ... 362s Setting up zip (3.0-14ubuntu2) ... 362s Setting up libblas3:armhf (3.12.1-2) ... 362s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 362s Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... 362s Setting up libjs-d3 (3.5.17-4) ... 362s Setting up fonts-dejavu-mono (2.37-8) ... 362s Setting up libtcl8.6:armhf (8.6.16+dfsg-1) ... 362s Setting up fonts-dejavu-core (2.37-8) ... 362s Setting up libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 362s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 362s Setting up libwebp7:armhf (1.5.0-0.1) ... 362s Setting up 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(1.3.2+dfsg-1) ... 366s Setting up r-cran-pkgbuild (1.4.6-1) ... 366s Setting up r-cran-pkgload (1.4.0-1) ... 366s Setting up r-cran-r.utils (2.13.0-1) ... 366s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 366s Setting up r-cran-testthat (3.2.3-1) ... 366s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 366s Setting up r-cran-r.cache (0.16.0-1) ... 366s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 366s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 366s Setting up r-cran-r.rsp (0.46.0+ds-1) ... 366s Processing triggers for libc-bin (2.41-1ubuntu2) ... 366s Processing triggers for man-db (2.13.0-1) ... 366s Processing triggers for install-info (7.1.1-1) ... 378s autopkgtest [16:45:26]: test run-unit-test: [----------------------- 380s BEGIN TEST demo_cholesky.R 380s 380s R version 4.4.3 (2025-02-28) -- "Trophy Case" 380s Copyright (C) 2025 The R Foundation for Statistical Computing 380s Platform: arm-unknown-linux-gnueabihf (32-bit) 380s 380s R is free software and comes with ABSOLUTELY NO WARRANTY. 380s You are welcome to redistribute it under certain conditions. 380s Type 'license()' or 'licence()' for distribution details. 380s 380s R is a collaborative project with many contributors. 380s Type 'contributors()' for more information and 380s 'citation()' on how to cite R or R packages in publications. 380s 380s Type 'demo()' for some demos, 'help()' for on-line help, or 380s 'help.start()' for an HTML browser interface to help. 380s Type 'q()' to quit R. 380s 381s > # HEADER #################################################### 381s > # This is file spam/tests/demo_cholesky.R. # 381s > # It is part of the R package spam, # 381s > # --> https://CRAN.R-project.org/package=spam # 381s > # --> https://CRAN.R-project.org/package=spam64 # 381s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 381s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 381s > # Roman Flury [aut], Daniel Gerber [ctb], # 381s > # Kaspar Moesinger [ctb] # 381s > # HEADER END ################################################ 381s > 381s > 381s > # We illustrate the Cholesky decompostion approaches 381s > options( echo=FALSE) 381s Spam version 2.11-1 (2025-01-20) is loaded. 381s Type 'help( Spam)' or 'demo( spam)' for a short introduction 381s and overview of this package. 381s Help for individual functions is also obtained by adding the 381s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 382s > 382s BEGIN TEST demo_jss10-example1.R 382s 382s R version 4.4.3 (2025-02-28) -- "Trophy Case" 382s Copyright (C) 2025 The R Foundation for Statistical Computing 382s Platform: arm-unknown-linux-gnueabihf (32-bit) 382s 382s R is free software and comes with ABSOLUTELY NO WARRANTY. 382s You are welcome to redistribute it under certain conditions. 382s Type 'license()' or 'licence()' for distribution details. 382s 382s R is a collaborative project with many contributors. 382s Type 'contributors()' for more information and 382s 'citation()' on how to cite R or R packages in publications. 382s 382s Type 'demo()' for some demos, 'help()' for on-line help, or 382s 'help.start()' for an HTML browser interface to help. 382s Type 'q()' to quit R. 382s 382s > # HEADER #################################################### 382s > # This is file spam/tests/demo_jss10-example1.R. # 382s > # It is part of the R package spam, # 382s > # --> https://CRAN.R-project.org/package=spam # 382s > # --> https://CRAN.R-project.org/package=spam64 # 382s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 382s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 382s > # Roman Flury [aut], Daniel Gerber [ctb], # 382s > # Kaspar Moesinger [ctb] # 382s > # HEADER END ################################################ 382s > 382s > 382s > # JSS article: 382s > # "spam: A Sparse Matrix R Package with Emphasis on 382s > # MCMC Methods for Gaussian Markov Random Fields" 382s > # 382s > # Compared to the R code given in the article, here we give: 382s > # - improved formatting 382s > # - more comments 382s > # - the R code to construct the figures 382s > 382s > 382s > 382s > # SETUP: 382s > library("spam") 383s Spam version 2.11-1 (2025-01-20) is loaded. 383s Type 'help( Spam)' or 'demo( spam)' for a short introduction 383s and overview of this package. 383s Help for individual functions is also obtained by adding the 383s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 383s 383s Attaching package: 'spam' 383s 383s The following objects are masked from 'package:base': 383s 383s backsolve, forwardsolve 383s 383s > options(spam.structurebased=TRUE) 383s > data("UKDriverDeaths") 383s > 383s > y <- sqrt(c(UKDriverDeaths)) # square root counts 383s > 383s > n <- length(y) # n=192 383s > m <- 12 # We want to predict for one season. 383s > nm <- n+m # Total length of s and t 383s > 383s > 383s > priorshape <- c(4, 1, 1) # alpha's, as in Rue & Held (2005) 383s > priorinvscale <- c(4, 0.1, 0.0005) # beta's 383s > 383s > # Construct the individual block precisions 383s > # (based on unit precision parameters kappa, denoted with k): 383s > 383s > # Qsy, Qty are trivial: 383s > Qsy <- diag.spam(n) 383s > pad(Qsy) <- c(n+m, n) # previously: dim(Qsy) <- c(n+m, n) 383s > 383s > Qty <- Qsy 383s > 383s > Qst <- spam(0, nm, nm) 383s > Qst[cbind(1:n, 1:n)] <- rep(1, n) 383s > 383s > 383s > # The form of Qss is given by (Rue and Held equation 3.59). 383s > # Qss can be constructed with a loop: 383s > Qss <- spam(0, nm, nm) 383s > for (i in 0:(nm-m)) { 383s + Qss[i+1:m,i+1:m] <- Qss[i+1:m, i+1:m] + matrix(1,m,m) 383s + # Qss[i+1:m,i+1:m] <- Qss[i+1:m, i+1:m]+1 # previously... 383s + } 383s > 383s > # Note that for the final version we need: 383s > # Qss <- k_s * Qss + k_y * diag.spam(nm) 383s > 383s > 383s > 383s > 383s > # The form of Qtt is given by (Rue and Held equation 3.40). 383s > # Similar approaches to construct Qtt: 383s > 383s > Qtt <- spam(0,nm,nm) 383s > Qtt[cbind(1:(nm-1),2:nm)] <- -c(2,rep(4,nm-3),2) 383s > Qtt[cbind(1:(nm-2),3:nm)] <- rep(1,nm-2) 383s > Qtt <- Qtt + t( Qtt) 383s > diag(Qtt) <- c(1,5,rep(6,nm-4),5,1) 383s > 383s > 383s > 383s > # Create temporary kappa and precision matrix to illustrate 383s > # adjacency matrix and ordering. 383s > k <- c(1,1,1) 383s > Qst_yk <- rbind(cbind(k[2]*Qss + k[1]*diag.spam(nm), k[1]*Qst), 383s + cbind(k[1]*Qst, k[3]*Qtt + k[1]*diag.spam(nm))) 383s > 383s > struct <- chol(Qst_yk) 383s > 383s > 383s > 383s > # Note that we do not provide the exactly the same ordering 383s > # algorithms. Hence, the following is sightly different than 383s > # Figure RH4.2. 383s > cholQst_yk <- chol(Qst_yk,pivot="RCM") 383s > P <- ordering(cholQst_yk) 383s > display(Qst_yk) 383s > display(Qst_yk[P,P]) 383s Warning message: 383s default value for 'cex' in 'display' might not be the optimal choice 383s Warning message: 383s default value for 'cex' in 'display' might not be the optimal choice 383s > 383s > 383s > 383s > # Recall: 383s > # k=( kappa_y, kappa_s, kappa_t)' 383s > 383s > # Gibbs sampler 383s > ngibbs <- 100 # In the original version is 500! 383s > burnin <- 10 # > 0 383s > totalg <- ngibbs+burnin 383s > set.seed(14) 383s > 383s > # Initialize parameters: 383s > spost <- tpost <- array(0, c(totalg, nm)) 383s > kpost <- array(0, c(totalg, 3)) 383s > 383s > # Starting values: 383s > kpost[1,] <- c(.5,28,500) 383s > tpost[1,] <- 40 383s > 383s > # calculation of a few variables: 383s > postshape <- priorshape + c( n/2, (n+1)/2, (n+m-2)/2) 383s > 383s > 383s > for (ig in 2:totalg) { 383s + 383s + Q <- rbind(cbind(kpost[ig-1,2]*Qss + kpost[ig-1,1]*Qst, 383s + kpost[ig-1,1]*Qst), 383s + cbind(kpost[ig-1,1]*Qst, 383s + kpost[ig-1,3]*Qtt + kpost[ig-1,1]*Qst)) 383s + 383s + b <- c(kpost[ig-1,1]*Qsy %*% y, kpost[ig-1,1]*Qsy %*% y) 383s + 383s + tmp <- rmvnorm.canonical(1, b, Q, Lstruct=struct) 383s + 383s + 383s + spost[ig,] <- tmp[1:nm] 383s + 383s + tpost[ig,] <- tmp[1:nm+nm] 383s + 383s + 383s + tmp <- y-spost[ig,1:n]-tpost[ig,1:n] 383s + 383s + postinvscale <- priorinvscale + # prior contribution 383s + c( sum( tmp^2)/2, # Qyy_st is the identity 383s + t(spost[ig,]) %*% (Qss %*% spost[ig,])/2, 383s + t(tpost[ig,]) %*% (Qtt %*% tpost[ig,])/2) 383s + 383s + 383s + kpost[ig,] <- rgamma(3, postshape, postinvscale) 383s + 383s + if( (ig%%10)==0) cat('.') 383s + 383s + } 384s ...........> 384s > 384s > 384s > # Eliminate burn-in: 384s > kpost <- kpost[-c(1:burnin),] 384s > spost <- spost[-c(1:burnin),] 384s > tpost <- tpost[-c(1:burnin),] 384s > 384s > postquant <- apply(spost+tpost, 2, quantile,c(.025,.975)) 384s > postmean <- apply(spost+tpost, 2, mean) 384s > postmedi <- apply(spost+tpost, 2, median) 384s > 384s > if (F){ 384s + 384s + par(mfcol=c(1,1),mai=c(.6,.8,.01,.01)) 384s + 384s + plot( y^2, ylim=c(800,2900),xlim=c(0,nm),ylab="Counts") 384s + #lines( postmean^2, col=2) 384s + lines( postmedi^2, col=2) 384s + matlines( t(postquant)^2, col=4,lty=1) 384s + 384s + legend("topright",legend=c("Posterior median", "Quantiles of posterior sample", 384s + "Quantiles of predictive distribution"), 384s + bty="n",col=c(2,4,3),lty=1) 384s + 384s + 384s + 384s + 384s + # Constructing a predictive distribution: 384s + ypred <- rnorm( ngibbs*nm, c(spost+tpost),sd=rep( 1/sqrt(kpost[,1]), nm)) 384s + dim(ypred) <- c(ngibbs,nm) 384s + postpredquant <- apply(ypred, 2, quantile,c(.025,.975)) 384s + matlines( t(postpredquant)^2, col=3,lty=1) 384s + points(y^2) 384s + dev.off() 384s + 384s + kpostmedian <- apply(kpost,2,median) 384s + 384s + par(mfcol=c(1,3),mai=c(.65,.65,.01,.01),cex=.85,mgp=c(2.6,1,0)) 384s + 384s + matplot( log( kpost), lty=1, type="l",xlab="Index") 384s + abline(h=log(kpostmedian),col=3) 384s + acf( kpost[,3],ylab=expression(kappa[t])) 384s + plot(kpost[,2:3],ylab=expression(kappa[t]),xlab=expression(kappa[s]),cex=.8) 384s + abline(h=kpostmedian[3],v=kpostmedian[2],col=3) 384s + dev.off() 384s + 384s + 384s + allkappas <- rbind(apply(kpost,2,mean), 384s + apply(kpost,2,median), 384s + apply(1/kpost,2,mean), 384s + apply(1/kpost,2,median)) 384s + colnames(allkappas) <- c("kappa_y", "kappa_s", "kappa_t") 384s + rownames(allkappas) <- c("Prec (mean)", "Prec (median)", 384s + "Var (mean)", "Var (median) ") 384s + print(allkappas,4) 384s + 384s + png("example1_m1.png",width=300,height=300) 384s + par(mai=c(.5,.5,.05,.05)) 384s + display(Qst_yk) 384s + dev.off() 384s + 384s + png("example1_m2.png",width=300,height=300) 384s + par(mai=c(.5,.5,.05,.05)) 384s + display(struct) 384s + dev.off() 384s + 384s + 384s + summary(kpost) 384s + 384s + 384s + } 384s > 384s BEGIN TEST demo_jss10-figures-table.R 384s 384s R version 4.4.3 (2025-02-28) -- "Trophy Case" 384s Copyright (C) 2025 The R Foundation for Statistical Computing 384s Platform: arm-unknown-linux-gnueabihf (32-bit) 384s 384s R is free software and comes with ABSOLUTELY NO WARRANTY. 384s You are welcome to redistribute it under certain conditions. 384s Type 'license()' or 'licence()' for distribution details. 384s 384s R is a collaborative project with many contributors. 384s Type 'contributors()' for more information and 384s 'citation()' on how to cite R or R packages in publications. 384s 384s Type 'demo()' for some demos, 'help()' for on-line help, or 384s 'help.start()' for an HTML browser interface to help. 384s Type 'q()' to quit R. 384s 384s > # HEADER #################################################### 384s > # This is file spam/tests/demo_jss10-figures-table.R. # 384s > # It is part of the R package spam, # 384s > # --> https://CRAN.R-project.org/package=spam # 384s > # --> https://CRAN.R-project.org/package=spam64 # 384s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 384s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 384s > # Roman Flury [aut], Daniel Gerber [ctb], # 384s > # Kaspar Moesinger [ctb] # 384s > # HEADER END ################################################ 384s > 384s > 384s > # This demo contains the R code to construct the figures and the table of the 384s > # article: 384s > # "spam: A Sparse Matrix R Package with Emphasis on 384s > # MCMC Methods for Gaussian Markov Random Fields" 384s > # submitted to JSS. 384s > 384s > 384s > # The code presented here differs in the following points form the actually used 384s > # one: 384s > # - Very large grid sizes or very high order neighbor structures are not included 384s > # here; 384s > # - Instead of (100+1) factorizations only (10+1) are performed here; 384s > # - No figure fine-tuning is done here. 384s > # - We had a few additional gc(), just to be sure. 384s > 384s > 384s > 384s > # The following are tests specific. Not all computers run with profiling. Instead 384s > # of commenting, we define dummies. 384s > options( echo=FALSE) 385s Spam version 2.11-1 (2025-01-20) is loaded. 385s Type 'help( Spam)' or 'demo( spam)' for a short introduction 385s and overview of this package. 385s Help for individual functions is also obtained by adding the 385s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 385s [1] 3 5 1 2 4 385s [1] 1 2 3 3 3 385s [1] 1 2 3 6 385s [1] 1.0000000 0.5000000 0.8660254 0.5773503 0.8164966 0.6123724 0.6123724 385s [8] 0.7905694 0.1581139 0.7745967 385s [1] 1 2 2 3 3 4 5 385s [1] 1 3 5 8 385s [1] 1 3 5 8 10 11 388s NULL 388s NULL 388s NULL 388s NULL 388s NULL 388s NULL 388s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 389s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 390s NULL 391s NULL 391s > 391s BEGIN TEST demo_jss15-BYM.R 391s 391s R version 4.4.3 (2025-02-28) -- "Trophy Case" 391s Copyright (C) 2025 The R Foundation for Statistical Computing 391s Platform: arm-unknown-linux-gnueabihf (32-bit) 391s 391s R is free software and comes with ABSOLUTELY NO WARRANTY. 391s You are welcome to redistribute it under certain conditions. 391s Type 'license()' or 'licence()' for distribution details. 391s 391s R is a collaborative project with many contributors. 391s Type 'contributors()' for more information and 391s 'citation()' on how to cite R or R packages in publications. 391s 391s Type 'demo()' for some demos, 'help()' for on-line help, or 391s 'help.start()' for an HTML browser interface to help. 391s Type 'q()' to quit R. 391s 392s > # HEADER #################################################### 392s > # This is file spam/tests/demo_jss15-BYM.R. # 392s > # It is part of the R package spam, # 392s > # --> https://CRAN.R-project.org/package=spam # 392s > # --> https://CRAN.R-project.org/package=spam64 # 392s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 392s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 392s > # Roman Flury [aut], Daniel Gerber [ctb], # 392s > # Kaspar Moesinger [ctb] # 392s > # HEADER END ################################################ 392s > 392s > 392s > options( echo=FALSE) 392s Spam version 2.11-1 (2025-01-20) is loaded. 392s Type 'help( Spam)' or 'demo( spam)' for a short introduction 392s and overview of this package. 392s Help for individual functions is also obtained by adding the 392s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 393s [1] -0.45371922 0.17297575 0.02605778 -0.44984751 -0.36053283 0.01309363 393s [1] -1.341895 -3.756725 -2.514229 -4.411210 -6.486653 -5.101487 393s [1] 15.05715 53.22751 41.15492 13.16245 19.87138 30.27948 393s [1] 0 1 1 1 1 0 393s [1] 0.255439209 -0.299099415 -0.004660022 -0.392147580 -0.318792450 393s [6] -0.344095560 393s [1] -0.0152950744 0.0008418105 0.0400659014 -0.0160847172 0.0064331753 393s [6] -0.0154282422 393s [1] 21 393s [1] -780.3814 393s > 393s > 393s BEGIN TEST demo_jss15-Leroux.R 394s 394s R version 4.4.3 (2025-02-28) -- "Trophy Case" 394s Copyright (C) 2025 The R Foundation for Statistical Computing 394s Platform: arm-unknown-linux-gnueabihf (32-bit) 394s 394s R is free software and comes with ABSOLUTELY NO WARRANTY. 394s You are welcome to redistribute it under certain conditions. 394s Type 'license()' or 'licence()' for distribution details. 394s 394s R is a collaborative project with many contributors. 394s Type 'contributors()' for more information and 394s 'citation()' on how to cite R or R packages in publications. 394s 394s Type 'demo()' for some demos, 'help()' for on-line help, or 394s 'help.start()' for an HTML browser interface to help. 394s Type 'q()' to quit R. 394s 394s > # HEADER #################################################### 394s > # This is file spam/tests/demo_jss15-Leroux.R. # 394s > # It is part of the R package spam, # 394s > # --> https://CRAN.R-project.org/package=spam # 394s > # --> https://CRAN.R-project.org/package=spam64 # 394s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 394s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 394s > # Roman Flury [aut], Daniel Gerber [ctb], # 394s > # Kaspar Moesinger [ctb] # 394s > # HEADER END ################################################ 394s > 394s > options( echo=FALSE) 395s Spam version 2.11-1 (2025-01-20) is loaded. 395s Type 'help( Spam)' or 'demo( spam)' for a short introduction 395s and overview of this package. 395s Help for individual functions is also obtained by adding the 395s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 395s Loading required package: stats4 395s 395s Attaching package: 'stats4' 395s 395s The following object is masked from 'package:spam': 395s 395s mle 395s 395s Loading required package: evd 397s [1] 0.9890008 0.9836375 0.9836375 0.9941272 0.9941272 0.9941272 397s [1] 13.60972 12.22357 14.06278 13.51154 13.66835 12.74985 397s [1] 0.115752190 -0.242792156 0.009907357 -0.144865999 -0.000139589 397s [6] -0.028916404 -0.032141235 -0.107868843 0.241070191 0.216479530 397s [11] 0.215633918 0.121392169 0.132614808 0.087540970 0.009744541 397s [16] 0.033720642 0.156237348 0.044155379 0.272346531 0.040463545 397s [21] 0.079639678 0.103953125 0.252556753 0.021593753 0.167167125 397s [26] 0.164189193 0.100494673 -0.213803862 0.117763888 -0.105802996 397s [31] 0.105966646 -0.099242014 -0.273013722 -0.048069002 -0.043229426 397s [36] -0.068403094 -0.213240808 -0.168754977 -0.087376979 -0.159318585 397s [41] -0.066445680 -0.042490650 -0.225786751 -0.311643655 -0.070018302 397s [46] -0.197298513 -0.172498476 -0.252130284 0.059552503 0.001103394 397s [51] 0.221565313 397s > 397s BEGIN TEST demo_spam.R 397s 397s R version 4.4.3 (2025-02-28) -- "Trophy Case" 397s Copyright (C) 2025 The R Foundation for Statistical Computing 397s Platform: arm-unknown-linux-gnueabihf (32-bit) 397s 397s R is free software and comes with ABSOLUTELY NO WARRANTY. 397s You are welcome to redistribute it under certain conditions. 397s Type 'license()' or 'licence()' for distribution details. 397s 397s R is a collaborative project with many contributors. 397s Type 'contributors()' for more information and 397s 'citation()' on how to cite R or R packages in publications. 397s 397s Type 'demo()' for some demos, 'help()' for on-line help, or 397s 'help.start()' for an HTML browser interface to help. 397s Type 'q()' to quit R. 397s 397s > # HEADER #################################################### 397s > # This is file spam/tests/demo_spam.R. # 397s > # It is part of the R package spam, # 397s > # --> https://CRAN.R-project.org/package=spam # 397s > # --> https://CRAN.R-project.org/package=spam64 # 397s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 397s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 397s > # Roman Flury [aut], Daniel Gerber [ctb], # 397s > # Kaspar Moesinger [ctb] # 397s > # HEADER END ################################################ 397s > 397s > 397s > # This is a simple demo, wrapping up the functionality of spam. 397s > options( echo=FALSE) 398s Spam version 2.11-1 (2025-01-20) is loaded. 398s Type 'help( Spam)' or 'demo( spam)' for a short introduction 398s and overview of this package. 398s Help for individual functions is also obtained by adding the 398s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 398s [,1] [,2] [,3] [,4] [,5] [,6] [,7] 398s [1,] -0.6618498 1.231945 -0.3828219 0.8828018 -1.266815 -0.7666105 -1.421992 398s Class 'spam' (32-bit) 398s [,1] [,2] [,3] [,4] [,5] [,6] [,7] 398s [1,] 0 1.23194518 -0.3828219 0.8828018 -1.2668148 -0.7666105 -1.4219925 398s [2,] 0 -0.06488077 0.2994216 1.8627490 -0.1985833 1.4433629 -0.3282283 398s [3,] 0 1.06899373 0.6742398 1.6117253 0.1388658 0.8448793 0.2845701 398s [4,] 0 -0.37696531 -0.2928163 0.1354795 -0.2793360 -0.3993704 0.7193359 398s [5,] 0 1.04318309 0.4880534 1.0880860 0.7089194 -1.4277676 0.4324160 398s Class 'spam' (32-bit) 398s [1] -0.36181804 0.07322929 -0.13634352 0.59605327 0.52252315 398s > 398s BEGIN TEST demo_timing.R 398s 398s R version 4.4.3 (2025-02-28) -- "Trophy Case" 398s Copyright (C) 2025 The R Foundation for Statistical Computing 398s Platform: arm-unknown-linux-gnueabihf (32-bit) 398s 398s R is free software and comes with ABSOLUTELY NO WARRANTY. 398s You are welcome to redistribute it under certain conditions. 398s Type 'license()' or 'licence()' for distribution details. 398s 398s R is a collaborative project with many contributors. 398s Type 'contributors()' for more information and 398s 'citation()' on how to cite R or R packages in publications. 398s 398s Type 'demo()' for some demos, 'help()' for on-line help, or 398s 'help.start()' for an HTML browser interface to help. 398s Type 'q()' to quit R. 398s 399s > # HEADER #################################################### 399s > # This is file spam/tests/demo_timing.R. # 399s > # It is part of the R package spam, # 399s > # --> https://CRAN.R-project.org/package=spam # 399s > # --> https://CRAN.R-project.org/package=spam64 # 399s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 399s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 399s > # Roman Flury [aut], Daniel Gerber [ctb], # 399s > # Kaspar Moesinger [ctb] # 399s > # HEADER END ################################################ 399s > 399s > 399s > # We construct a few large matrices and we compare how much faster (slower) 399s > # we are compared to the full matrix analysis. 399s > # Since all the calculation are also done with full matrices, we do not 399s > # exagerate with the sizes. 399s > 399s > options( echo=FALSE) 399s Spam version 2.11-1 (2025-01-20) is loaded. 399s Type 'help( Spam)' or 'demo( spam)' for a short introduction 399s and overview of this package. 399s Help for individual functions is also obtained by adding the 399s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 399s Comparing: Transpose 400s Comparing: multiplication 400s Comparing: solving 400s Comparing: Transpose 400s Comparing: multiplication 401s Comparing: add identity 401s Comparing: add identity quicker 401s Comparing: solving 401s Matrix object of class 'spam' of dimension 10x10, 401s with 10 (row-wise) nonzero elements. 401s Density of the matrix is 10%. 401s Class 'spam' (32-bit) 401s > 401s > 401s > 401s > 401s > 401s > # illustrate the new spam x matrix multiply: 401s > if (F){ 401s + n <- 1000 401s + 401s + A <- spam(0,n,n) 401s + A[cbind(1:(n-1),2:n)] <- -c(2,rep(4,n-3),2) 401s + A[cbind(1:(n-2),3:n)] <- rep(1,n-2) 401s + A <- A + t( A) 401s + diag(A) <- c(1,5,rep(6,n-4),5,1) 401s + 401s + 401s + B <- array(rnorm(n*n),c(n,n)) 401s + 401s + system.time(C1 <- .spam.matmul.mat(A,B)) 401s + system.time(C2 <- .spam.matmul(A,B)) 401s + norm(C1-C2) 401s + 401s + 401s + } 401s > 401s BEGIN TEST jss_areal_counts.R 401s 401s R version 4.4.3 (2025-02-28) -- "Trophy Case" 401s Copyright (C) 2025 The R Foundation for Statistical Computing 401s Platform: arm-unknown-linux-gnueabihf (32-bit) 401s 401s R is free software and comes with ABSOLUTELY NO WARRANTY. 401s You are welcome to redistribute it under certain conditions. 401s Type 'license()' or 'licence()' for distribution details. 401s 401s R is a collaborative project with many contributors. 401s Type 'contributors()' for more information and 401s 'citation()' on how to cite R or R packages in publications. 401s 401s Type 'demo()' for some demos, 'help()' for on-line help, or 401s 'help.start()' for an HTML browser interface to help. 401s Type 'q()' to quit R. 401s 402s > # HEADER #################################################### 402s > # This is file spam/tests/jss_areal_counts.R. # 402s > # It is part of the R package spam, # 402s > # --> https://CRAN.R-project.org/package=spam # 402s > # --> https://CRAN.R-project.org/package=spam64 # 402s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 402s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 402s > # Roman Flury [aut], Daniel Gerber [ctb], # 402s > # Kaspar Moesinger [ctb] # 402s > # HEADER END ################################################ 402s > 402s > 402s > # JSS article: 402s > # "Pitfalls in the implementation of Bayesian 402s > # hierarchical modeling of areal count data. 402s > # An illustration using BYM and Leroux models." 402s > # 402s > # test the MCMC sampler from the paper with 30 iterations. 402s > 402s > 402s > # SETUP: 402s > library("spam") 402s Spam version 2.11-1 (2025-01-20) is loaded. 402s Type 'help( Spam)' or 'demo( spam)' for a short introduction 402s and overview of this package. 402s Help for individual functions is also obtained by adding the 402s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 402s 402s Attaching package: 'spam' 402s 402s The following objects are masked from 'package:base': 402s 402s backsolve, forwardsolve 402s 402s > options(spam.structurebased=TRUE) 402s > 402s > # BYM --------------------------------------------- 402s > data(Oral); attach(Oral) 402s > path <- system.file("demodata/germany.adjacency", package = "spam") 402s > A <- adjacency.landkreis(path); n <- dim(A)[1] 403s > 403s > set.seed(2) 403s > hyperA <- c(1, 1); hyperB <- c(0.5, .01) 403s > totalg <- 30 403s > 403s > upost <- vpost <- array(0, c(totalg, n)) 403s > kpost <- array(NA, c(totalg, 2)); accept <- rep(NA, totalg) 403s > upost[1,] <- vpost[1,] <- rep(.001, 544); kpost[1,] <- c(10, 100) 403s > 403s > eta <- upost[1,] + vpost[1,] 403s > C <- exp(eta) * E; diagC <- diag.spam(c(rep(0, n), C)) 403s > b <- c( rep(0, n), Y + (eta - 1) * C) 403s > Qu <- R <- precmat.IGMRFirreglat(A); pad(Qu) <- c(2 * n, 2 * n) 403s > Qv <- as.spam(rbind(cbind( diag(n), -diag(n)), 403s + cbind(-diag(n), diag(n)))) 403s > Q <- kpost[1,1] * Qu + kpost[1,2] * Qv + diagC 403s > struct <- chol(Q, memory = list(nnzcolindices = 6467)) 403s > uRuHalf <- t(upost[1,]) %*% (R %*% upost[1,]) / 2 403s > vvHalf <- t(vpost[1,]) %*% vpost[1,] / 2 403s > postshape <- hyperA + c(n - 1, n) / 2 403s > 403s > for (i in 2:totalg) { 403s + kpost[i,] <- rgamma(2, postshape, hyperB + c(uRuHalf, vvHalf)) 403s + 403s + etaTilde <- eta 403s + for(index in 1:2){ 403s + C <- E * exp(etaTilde) 403s + diagC <- diag.spam(c(rep(0, n), C)) 403s + b <- c(rep(0, 544), Y + (etaTilde - 1) * C) 403s + Q <- kpost[i,1] * Qu + kpost[i,2] * Qv + diagC 403s + etaTilde <- c(solve.spam(Q, b, 403s + Rstruct = struct))[1:n + n] 403s + } 403s + 403s + C <- exp(etaTilde) * E; diagC <- diag.spam(c(rep(0, n), C)) 403s + b <- c( rep(0, n), Y + (etaTilde - 1) * C) 403s + Q <- kpost[i,1] * Qu + kpost[i,2] * Qv + diagC 403s + 403s + x_ <- c(rmvnorm.canonical(1, b, Q, Rstruct = struct)) 403s + upost[i,] <- x_[1:n]; eta_ <- x_[1:n + n]; vpost[i,] <- eta_ - upost[i,] 403s + uRuHalf_ <- t(upost[i,]) %*% (R %*% upost[i,]) / 2 403s + vvHalf_ <- t(vpost[i,]) %*% vpost[i,] / 2 403s + 403s + etaTilde_ <- eta_ 403s + for(index in 1:2){ 403s + C_ <- E * exp(etaTilde_) 403s + diagC_ <- diag.spam(c(rep(0, n), C_)) 403s + b_ <- c(rep(0, 544), Y + (etaTilde_ - 1) * C_) 403s + Q_<- kpost[i,1] * Qu + kpost[i,2] * Qv + diagC_ 403s + etaTilde_ <- c(solve.spam(Q_, b_, 403s + Rstruct = struct))[1:n + n] 403s + } 403s + 403s + C_ <- exp(etaTilde_) * E; diagC_ <- diag.spam(c(rep(0, n), C_)) 403s + b_ <- c( rep(0, n), Y + (etaTilde_ - 1) * C_) 403s + Q_ <- kpost[i,1] * Qu + kpost[i,2] * Qv + diagC_ 403s + 403s + logPost_ <- sum(Y * eta_ - E * exp(eta_)) - 403s + kpost[i,1] * uRuHalf_ - kpost[i, 2] * vvHalf_ 403s + logPost <- sum(Y * eta - E * exp(eta)) - kpost[i,1] * uRuHalf - 403s + kpost[i,2] * vvHalf 403s + logApproxX_ <- - kpost[i,1] * uRuHalf_ - kpost[i,2] * vvHalf_ - 403s + sum(.5 * eta_^2 * C) + sum(b * eta_) 403s + logApproxX <- - kpost[i,1] * uRuHalf - kpost[i,2] * vvHalf - 403s + sum(.5 * eta^2 * C_) + sum(b_ * eta) 403s + logAlpha <- min(0, logPost_ - logPost + logApproxX - logApproxX_) 403s + 403s + if (log(runif(1)) < logAlpha) { 403s + uRuHalf <- uRuHalf_; vvHalf <- vvHalf_ 403s + eta <- eta_; b <- b_; C <- C_; accept[i] <- 1 403s + } else{ 403s + accept[i] <- 0; upost[i,] <- upost[i-1,]; vpost[i,] <- vpost[i-1,]} 403s + } 403s > 403s > # values of 30th iteration 403s > head(eta) 403s [1] -0.45371922 0.17297575 0.02605778 -0.44984751 -0.36053283 0.01309363 403s > tail(b) 403s [1] -1.341895 -3.756725 -2.514229 -4.411210 -6.486653 -5.101487 403s > head(C) 403s [1] 15.05715 53.22751 41.15492 13.16245 19.87138 30.27948 403s > tail(accept) 403s [1] 0 1 1 1 1 0 403s > tail(upost[30,]) 403s [1] 0.255439209 -0.299099415 -0.004660022 -0.392147580 -0.318792450 403s [6] -0.344095560 403s > tail(vpost[30,]) 403s [1] -0.0152950744 0.0008418105 0.0400659014 -0.0160847172 0.0064331753 403s [6] -0.0154282422 403s > sum(accept[-1]) 403s [1] 21 403s > sum(upost) 403s [1] -780.3814 403s > 403s > 403s BEGIN TEST testthat.R 403s 403s R version 4.4.3 (2025-02-28) -- "Trophy Case" 403s Copyright (C) 2025 The R Foundation for Statistical Computing 403s Platform: arm-unknown-linux-gnueabihf (32-bit) 403s 403s R is free software and comes with ABSOLUTELY NO WARRANTY. 403s You are welcome to redistribute it under certain conditions. 403s Type 'license()' or 'licence()' for distribution details. 403s 403s R is a collaborative project with many contributors. 403s Type 'contributors()' for more information and 403s 'citation()' on how to cite R or R packages in publications. 403s 403s Type 'demo()' for some demos, 'help()' for on-line help, or 403s 'help.start()' for an HTML browser interface to help. 403s Type 'q()' to quit R. 403s 404s > # HEADER #################################################### 404s > # This is file spam/tests/testthat.R. # 404s > # It is part of the R package spam, # 404s > # --> https://CRAN.R-project.org/package=spam # 404s > # --> https://CRAN.R-project.org/package=spam64 # 404s > # --> https://git.math.uzh.ch/reinhard.furrer/spam # 404s > # by Reinhard Furrer [aut, cre], Florian Gerber [aut], # 404s > # Roman Flury [aut], Daniel Gerber [ctb], # 404s > # Kaspar Moesinger [ctb] # 404s > # HEADER END ################################################ 404s > 404s > library("testthat") 404s > # library("spam") 404s > 404s > test_check("spam") 404s Loading required package: spam 405s Spam version 2.11-1 (2025-01-20) is loaded. 405s Type 'help( Spam)' or 'demo( spam)' for a short introduction 405s and overview of this package. 405s Help for individual functions is also obtained by adding the 405s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 405s 405s Attaching package: 'spam' 405s 405s The following objects are masked from 'package:base': 405s 405s backsolve, forwardsolve 405s 412s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 730 ] 412s > 413s autopkgtest [16:46:01]: test run-unit-test: -----------------------] 417s run-unit-test PASS 417s autopkgtest [16:46:05]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 420s autopkgtest [16:46:08]: test pkg-r-autopkgtest: preparing testbed 443s autopkgtest [16:46:31]: testbed dpkg architecture: armhf 444s autopkgtest [16:46:32]: testbed apt version: 2.9.33 448s autopkgtest [16:46:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup 450s autopkgtest [16:46:38]: testbed release detected to be: plucky 457s autopkgtest [16:46:45]: updating testbed package index (apt update) 459s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 459s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 459s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 460s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 460s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 460s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 460s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 460s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 461s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 461s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 461s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 461s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 461s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 461s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 461s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 462s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 489s Get:17 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 489s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 490s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 490s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 490s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 507s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 509s Fetched 41.0 MB in 50s (825 kB/s) 510s Reading package lists... 516s autopkgtest [16:47:44]: upgrading testbed (apt dist-upgrade and autopurge) 518s Reading package lists... 518s Building dependency tree... 518s Reading state information... 519s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 519s Starting 2 pkgProblemResolver with broken count: 0 520s Done 521s Entering ResolveByKeep 522s 522s Calculating upgrade... 523s The following packages will be upgraded: 523s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 523s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 523s Need to get 8683 kB of archives. 523s After this operation, 23.6 kB of additional disk space will be used. 523s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 527s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 527s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 531s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 532s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 532s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 532s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 533s Preconfiguring packages ... 533s Fetched 8683 kB in 9s (955 kB/s) 533s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 533s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 533s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 534s Setting up libc6:armhf (2.41-1ubuntu2) ... 534s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 534s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 534s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 534s Setting up libc-bin (2.41-1ubuntu2) ... 535s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 535s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 535s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 535s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 535s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 535s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 535s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 535s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 535s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 535s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 536s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 536s Setting up sos (4.9.0-5) ... 537s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 537s Setting up locales (2.41-1ubuntu2) ... 538s Generating locales (this might take a while)... 542s en_US.UTF-8... done 542s Generation complete. 542s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 542s Setting up strace (6.13+ds-1ubuntu1) ... 542s Processing triggers for man-db (2.13.0-1) ... 543s Processing triggers for systemd (257.3-1ubuntu3) ... 546s Reading package lists... 547s Building dependency tree... 547s Reading state information... 547s Starting pkgProblemResolver with broken count: 0 548s Starting 2 pkgProblemResolver with broken count: 0 548s Done 548s Solving dependencies... 549s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 551s autopkgtest [16:48:19]: rebooting testbed after setup commands that affected boot 616s Reading package lists... 617s Building dependency tree... 617s Reading state information... 617s Starting pkgProblemResolver with broken count: 0 617s Starting 2 pkgProblemResolver with broken count: 0 617s Done 618s The following NEW packages will be installed: 618s build-essential cpp cpp-14 cpp-14-arm-linux-gnueabihf 618s cpp-arm-linux-gnueabihf dctrl-tools fontconfig fontconfig-config 618s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 618s fonts-glyphicons-halflings fonts-mathjax g++ g++-14 618s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 618s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gfortran gfortran-14 618s gfortran-14-arm-linux-gnueabihf gfortran-arm-linux-gnueabihf icu-devtools 618s javascript-common libasan8 libblas-dev libblas3 libbz2-dev libc-dev-bin 618s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev 618s libdeflate0 libfontconfig1 libfreetype6 libgcc-14-dev libgfortran-14-dev 618s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev 618s libisl23 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 618s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 618s libjs-highlight.js libjs-jquery libjs-jquery-datatables 618s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 618s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 618s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 618s liblerc4 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 618s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 618s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 618s libpng-dev libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 618s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 618s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 618s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 618s pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 618s r-base-dev r-cran-base64enc r-cran-brio r-cran-bslib r-cran-cachem 618s r-cran-callr r-cran-cli r-cran-commonmark r-cran-crayon r-cran-desc 618s r-cran-diffobj r-cran-digest r-cran-dotcall64 r-cran-evaluate r-cran-evd 618s r-cran-fastmap r-cran-fields r-cran-fontawesome r-cran-fs r-cran-glue 618s r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-jquerylib r-cran-jsonlite 618s r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 618s r-cran-magrittr r-cran-maps r-cran-matrix r-cran-memoise r-cran-mime 618s r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise 618s r-cran-processx r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs 618s r-cran-rcpp r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-sass 618s r-cran-shiny r-cran-sourcetools r-cran-spam r-cran-testthat r-cran-tinytex 618s r-cran-truncdist r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun 618s r-cran-xtable r-cran-yaml rpcsvc-proto unzip x11-common xdg-utils zip 618s zlib1g-dev 619s 0 upgraded, 188 newly installed, 0 to remove and 0 not upgraded. 619s Need to get 208 MB of archives. 619s After this operation, 709 MB of additional disk space will be used. 619s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 619s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 621s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 621s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 621s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 623s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 623s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 623s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 634s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 634s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 634s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 634s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 634s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 634s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 638s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 639s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 640s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 660s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 660s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 660s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 660s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 663s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 673s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 673s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 673s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 673s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 673s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf dctrl-tools armhf 2.24-3build3 [94.7 kB] 674s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 674s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 674s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 675s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 675s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 676s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 676s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 676s Get:35 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 677s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 679s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 679s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran-14-dev armhf 14.2.0-17ubuntu3 [370 kB] 679s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9763 kB] 690s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14 armhf 14.2.0-17ubuntu3 [13.6 kB] 690s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1026 B] 690s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran armhf 4:14.2.0-1ubuntu1 [1166 B] 690s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf icu-devtools armhf 76.1-1ubuntu2 [206 kB] 690s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf javascript-common all 12 [5216 B] 690s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 691s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libblas-dev armhf 3.12.1-2 [141 kB] 691s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf libbz2-dev armhf 1.0.8-6 [30.9 kB] 691s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 691s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 691s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 691s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 691s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 691s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 691s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 691s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate-dev armhf 1.23-1 [45.0 kB] 691s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 692s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 692s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 692s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 692s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libicu-dev armhf 76.1-1ubuntu2 [12.0 MB] 706s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 706s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8-dev armhf 2.1.5-3ubuntu2 [265 kB] 706s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 706s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] 706s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] 706s Get:66 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 706s Get:67 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 706s Get:68 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 707s Get:69 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-d3 all 3.5.17-4 [132 kB] 707s Get:70 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] 707s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 708s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 708s Get:73 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 708s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 708s Get:75 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 708s Get:76 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 708s Get:77 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 708s Get:78 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 708s Get:79 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 708s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 711s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack-dev armhf 3.12.1-2 [2207 kB] 713s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 714s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf liblua5.4-0 armhf 5.4.7-1 [134 kB] 714s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf libncurses-dev armhf 6.5+20250216-2 [345 kB] 714s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf libthai-data all 0.1.29-2build1 [158 kB] 714s Get:86 http://ftpmaster.internal/ubuntu plucky/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 714s Get:87 http://ftpmaster.internal/ubuntu plucky/main armhf libpango-1.0-0 armhf 1.56.2-1 [216 kB] 715s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf libpangoft2-1.0-0 armhf 1.56.2-1 [43.6 kB] 715s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf libpangocairo-1.0-0 armhf 1.56.2-1 [25.1 kB] 715s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper2 armhf 2.2.5-0.3 [16.3 kB] 715s Get:91 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper-utils armhf 2.2.5-0.3 [14.2 kB] 715s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-16-0 armhf 10.45-1 [207 kB] 715s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-32-0 armhf 10.45-1 [197 kB] 715s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-posix3 armhf 10.45-1 [6300 B] 715s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-dev armhf 10.45-1 [752 kB] 716s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf libpkgconf3 armhf 1.8.1-4 [26.6 kB] 716s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 717s Get:98 http://ftpmaster.internal/ubuntu plucky/main armhf libpng-dev armhf 1.6.47-1 [251 kB] 717s Get:99 http://ftpmaster.internal/ubuntu plucky/main armhf libreadline-dev armhf 8.2-6 [153 kB] 718s Get:100 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 718s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 718s Get:102 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 719s Get:103 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 719s Get:104 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 719s Get:105 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 719s Get:106 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 719s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 719s Get:108 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 720s Get:109 http://ftpmaster.internal/ubuntu plucky/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 720s Get:110 http://ftpmaster.internal/ubuntu plucky/main armhf zip armhf 3.0-14ubuntu2 [164 kB] 720s Get:111 http://ftpmaster.internal/ubuntu plucky/main armhf unzip armhf 6.0-28ubuntu6 [167 kB] 721s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 721s Get:113 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-core armhf 4.4.3-1 [28.2 MB] 754s Get:114 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-littler armhf 0.3.20-2 [90.9 kB] 754s Get:115 http://ftpmaster.internal/ubuntu plucky/universe armhf littler all 0.3.20-2 [2554 B] 754s Get:116 http://ftpmaster.internal/ubuntu plucky/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] 755s Get:117 http://ftpmaster.internal/ubuntu plucky/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 755s Get:118 http://ftpmaster.internal/ubuntu plucky/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] 755s Get:119 http://ftpmaster.internal/ubuntu plucky/universe armhf pandoc-data all 3.1.11.1-3build1 [78.8 kB] 755s Get:120 http://ftpmaster.internal/ubuntu plucky/universe armhf pandoc armhf 3.1.11.1+ds-2 [36.7 MB] 796s Get:121 http://ftpmaster.internal/ubuntu plucky/main armhf liblzma-dev armhf 5.6.4-1 [166 kB] 797s Get:122 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf-bin armhf 1.8.1-4 [21.2 kB] 797s Get:123 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf armhf 1.8.1-4 [16.8 kB] 797s Get:124 http://ftpmaster.internal/ubuntu plucky/main armhf libtirpc-dev armhf 1.3.4+ds-1.3 [184 kB] 797s Get:125 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-dev all 4.4.3-1 [4176 B] 797s Get:126 http://ftpmaster.internal/ubuntu plucky/universe armhf pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 797s Get:127 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] 797s Get:128 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-brio armhf 1.1.5-1 [37.9 kB] 797s Get:129 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rlang armhf 1.1.5-1 [1701 kB] 799s Get:130 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fastmap armhf 1.2.0-1 [69.8 kB] 799s Get:131 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-cachem armhf 1.1.0-1 [73.8 kB] 799s Get:132 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-digest armhf 0.6.37-1 [207 kB] 799s Get:133 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-htmltools armhf 0.5.8.1-1 [372 kB] 799s Get:134 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 799s Get:135 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-jsonlite armhf 1.9.1+dfsg-1 [440 kB] 800s Get:136 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-cli armhf 3.6.4-1 [1377 kB] 801s Get:137 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-glue armhf 1.8.0-1 [162 kB] 801s Get:138 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 802s Get:139 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] 802s Get:140 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mime armhf 0.12-2 [35.5 kB] 802s Get:141 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fs armhf 1.6.5+dfsg-1 [242 kB] 802s Get:142 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r6 all 2.6.1-1 [101 kB] 802s Get:143 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] 802s Get:144 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-sass armhf 0.4.9+dfsg-1 [926 kB] 803s Get:145 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 808s Get:146 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-ps armhf 1.9.0-1 [403 kB] 808s Get:147 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-processx armhf 3.8.6-1 [359 kB] 809s Get:148 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-callr all 3.7.6-1 [458 kB] 809s Get:149 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-commonmark armhf 1.9.2-2 [112 kB] 809s Get:150 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-crayon all 1.5.3-1 [165 kB] 809s Get:151 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-desc all 1.4.3-1 [359 kB] 810s Get:152 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-diffobj armhf 0.3.5-1 [1115 kB] 811s Get:153 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-dotcall64 armhf 1.2-1 [36.5 kB] 811s Get:154 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-evaluate all 1.0.3-1 [114 kB] 811s Get:155 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-evd armhf 2.3-7.1-1 [1666 kB] 813s Get:156 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 813s Get:157 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rcpp armhf 1.0.14-1 [1976 kB] 815s Get:158 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-spam armhf 2.11-1-1 [2730 kB] 818s Get:159 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] 820s Get:160 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-maps armhf 3.4.2.1-1 [2348 kB] 821s Get:161 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fields armhf 16.3.1-1 [3760 kB] 826s Get:162 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fontawesome all 0.5.3-1 [1331 kB] 827s Get:163 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-xfun armhf 0.51+dfsg-1 [573 kB] 828s Get:164 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-highr all 0.11+dfsg-1 [38.5 kB] 828s Get:165 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-later armhf 1.4.1+dfsg-1 [141 kB] 828s Get:166 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] 828s Get:167 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-promises armhf 1.3.2+dfsg-1 [288 kB] 828s Get:168 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-httpuv armhf 1.6.15+dfsg-1 [480 kB] 829s Get:169 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-yaml armhf 2.3.10-1 [101 kB] 829s Get:170 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 835s Get:171 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-knitr all 1.49+dfsg-1 [859 kB] 836s Get:172 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 837s Get:173 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-matrix armhf 1.7-3-1 [4039 kB] 841s Get:174 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgbuild all 1.4.6-1 [213 kB] 841s Get:175 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rprojroot all 2.0.4-2 [125 kB] 841s Get:176 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-withr all 3.0.2+dfsg-1 [214 kB] 842s Get:177 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgload all 1.4.0-1 [247 kB] 842s Get:178 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-praise all 1.0.0-4build1 [20.3 kB] 842s Get:179 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-tinytex all 0.56-1 [148 kB] 842s Get:180 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-modernizr all 3.13.0-0.1 [101 kB] 842s Get:181 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] 843s Get:182 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] 843s Get:183 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 843s Get:184 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 847s Get:185 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 848s Get:186 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-waldo all 0.6.1-2 [150 kB] 848s Get:187 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-testthat armhf 3.2.3-1 [1633 kB] 850s Get:188 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-truncdist all 1.0-2-4build1 [34.6 kB] 851s Preconfiguring packages ... 851s Fetched 208 MB in 3min 52s (899 kB/s) 851s Selecting previously unselected package libc-dev-bin. 851s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 851s Preparing to unpack .../000-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 851s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 851s Selecting previously unselected package linux-libc-dev:armhf. 851s Preparing to unpack .../001-linux-libc-dev_6.14.0-10.10_armhf.deb ... 851s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 851s Selecting previously unselected package libcrypt-dev:armhf. 851s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 851s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 851s Selecting previously unselected package rpcsvc-proto. 851s Preparing to unpack .../003-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 851s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 852s Selecting previously unselected package libc6-dev:armhf. 852s Preparing to unpack .../004-libc6-dev_2.41-1ubuntu2_armhf.deb ... 852s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 852s Selecting previously unselected package libisl23:armhf. 852s Preparing to unpack .../005-libisl23_0.27-1_armhf.deb ... 852s Unpacking libisl23:armhf (0.27-1) ... 852s Selecting previously unselected package libmpc3:armhf. 852s Preparing to unpack .../006-libmpc3_1.3.1-1build2_armhf.deb ... 852s Unpacking libmpc3:armhf (1.3.1-1build2) ... 852s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 852s Preparing to unpack .../007-cpp-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 852s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 852s Selecting previously unselected package cpp-14. 852s Preparing to unpack .../008-cpp-14_14.2.0-17ubuntu3_armhf.deb ... 852s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 852s Selecting previously unselected package cpp-arm-linux-gnueabihf. 852s Preparing to unpack .../009-cpp-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 852s Unpacking cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 852s Selecting previously unselected package cpp. 852s Preparing to unpack .../010-cpp_4%3a14.2.0-1ubuntu1_armhf.deb ... 852s Unpacking cpp (4:14.2.0-1ubuntu1) ... 852s Selecting previously unselected package libcc1-0:armhf. 852s Preparing to unpack .../011-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 852s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 852s Selecting previously unselected package libgomp1:armhf. 852s Preparing to unpack .../012-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 852s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 852s Selecting previously unselected package libasan8:armhf. 852s Preparing to unpack .../013-libasan8_15-20250222-0ubuntu1_armhf.deb ... 852s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 852s Selecting previously unselected package libubsan1:armhf. 852s Preparing to unpack .../014-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 852s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 852s Selecting previously unselected package libgcc-14-dev:armhf. 853s Preparing to unpack .../015-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 853s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 853s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 853s Preparing to unpack .../016-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 853s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 853s Selecting previously unselected package gcc-14. 853s Preparing to unpack .../017-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 853s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 853s Selecting previously unselected package gcc-arm-linux-gnueabihf. 853s Preparing to unpack .../018-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 853s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 853s Selecting previously unselected package gcc. 853s Preparing to unpack .../019-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 853s Unpacking gcc (4:14.2.0-1ubuntu1) ... 853s Selecting previously unselected package libstdc++-14-dev:armhf. 853s Preparing to unpack .../020-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 853s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 853s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 854s Preparing to unpack .../021-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 854s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 854s Selecting previously unselected package g++-14. 854s Preparing to unpack .../022-g++-14_14.2.0-17ubuntu3_armhf.deb ... 854s Unpacking g++-14 (14.2.0-17ubuntu3) ... 854s Selecting previously unselected package g++-arm-linux-gnueabihf. 854s Preparing to unpack .../023-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 854s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 854s Selecting previously unselected package g++. 854s Preparing to unpack .../024-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 854s Unpacking g++ (4:14.2.0-1ubuntu1) ... 854s Selecting previously unselected package build-essential. 854s Preparing to unpack .../025-build-essential_12.10ubuntu1_armhf.deb ... 854s Unpacking build-essential (12.10ubuntu1) ... 854s Selecting previously unselected package dctrl-tools. 854s Preparing to unpack .../026-dctrl-tools_2.24-3build3_armhf.deb ... 854s Unpacking dctrl-tools (2.24-3build3) ... 854s Selecting previously unselected package libfreetype6:armhf. 854s Preparing to unpack .../027-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 854s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 854s Selecting previously unselected package fonts-dejavu-mono. 854s Preparing to unpack .../028-fonts-dejavu-mono_2.37-8_all.deb ... 854s Unpacking fonts-dejavu-mono (2.37-8) ... 854s Selecting previously unselected package fonts-dejavu-core. 854s Preparing to unpack .../029-fonts-dejavu-core_2.37-8_all.deb ... 854s Unpacking fonts-dejavu-core (2.37-8) ... 854s Selecting previously unselected package fontconfig-config. 854s Preparing to unpack .../030-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 855s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 855s Selecting previously unselected package libfontconfig1:armhf. 855s Preparing to unpack .../031-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 855s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 855s Selecting previously unselected package fontconfig. 855s Preparing to unpack .../032-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 855s Unpacking fontconfig (2.15.0-2ubuntu1) ... 855s Selecting previously unselected package fonts-font-awesome. 855s Preparing to unpack .../033-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 855s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 855s Selecting previously unselected package fonts-glyphicons-halflings. 855s Preparing to unpack .../034-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 855s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 855s Selecting previously unselected package fonts-mathjax. 855s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 855s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 855s Selecting previously unselected package libgfortran5:armhf. 855s Preparing to unpack .../036-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 855s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 855s Selecting previously unselected package libgfortran-14-dev:armhf. 855s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-17ubuntu3_armhf.deb ... 855s Unpacking libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 855s Selecting previously unselected package gfortran-14-arm-linux-gnueabihf. 855s Preparing to unpack .../038-gfortran-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 855s Unpacking gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 855s Selecting previously unselected package gfortran-14. 855s Preparing to unpack .../039-gfortran-14_14.2.0-17ubuntu3_armhf.deb ... 855s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 855s Selecting previously unselected package gfortran-arm-linux-gnueabihf. 855s Preparing to unpack .../040-gfortran-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 855s Unpacking gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 855s Selecting previously unselected package gfortran. 856s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_armhf.deb ... 856s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 856s Selecting previously unselected package icu-devtools. 856s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_armhf.deb ... 856s Unpacking icu-devtools (76.1-1ubuntu2) ... 856s Selecting previously unselected package javascript-common. 856s Preparing to unpack .../043-javascript-common_12_all.deb ... 856s Unpacking javascript-common (12) ... 856s Selecting previously unselected package libblas3:armhf. 856s Preparing to unpack .../044-libblas3_3.12.1-2_armhf.deb ... 856s Unpacking libblas3:armhf (3.12.1-2) ... 856s Selecting previously unselected package libblas-dev:armhf. 856s Preparing to unpack .../045-libblas-dev_3.12.1-2_armhf.deb ... 856s Unpacking libblas-dev:armhf (3.12.1-2) ... 856s Selecting previously unselected package libbz2-dev:armhf. 856s Preparing to unpack .../046-libbz2-dev_1.0.8-6_armhf.deb ... 856s Unpacking libbz2-dev:armhf (1.0.8-6) ... 856s Selecting previously unselected package libpixman-1-0:armhf. 856s Preparing to unpack .../047-libpixman-1-0_0.44.0-3_armhf.deb ... 856s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 856s Selecting previously unselected package libxcb-render0:armhf. 856s Preparing to unpack .../048-libxcb-render0_1.17.0-2_armhf.deb ... 856s Unpacking libxcb-render0:armhf (1.17.0-2) ... 856s Selecting previously unselected package libxcb-shm0:armhf. 856s Preparing to unpack .../049-libxcb-shm0_1.17.0-2_armhf.deb ... 856s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 856s Selecting previously unselected package libxrender1:armhf. 856s Preparing to unpack .../050-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 856s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 856s Selecting previously unselected package libcairo2:armhf. 856s Preparing to unpack .../051-libcairo2_1.18.2-2_armhf.deb ... 856s Unpacking libcairo2:armhf (1.18.2-2) ... 856s Selecting previously unselected package libdatrie1:armhf. 856s Preparing to unpack .../052-libdatrie1_0.2.13-3build1_armhf.deb ... 856s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 856s Selecting previously unselected package libdeflate0:armhf. 856s Preparing to unpack .../053-libdeflate0_1.23-1_armhf.deb ... 856s Unpacking libdeflate0:armhf (1.23-1) ... 856s Selecting previously unselected package libdeflate-dev:armhf. 856s Preparing to unpack .../054-libdeflate-dev_1.23-1_armhf.deb ... 856s Unpacking libdeflate-dev:armhf (1.23-1) ... 856s Selecting previously unselected package libgraphite2-3:armhf. 856s Preparing to unpack .../055-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 856s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 856s Selecting previously unselected package libharfbuzz0b:armhf. 856s Preparing to unpack .../056-libharfbuzz0b_10.2.0-1_armhf.deb ... 856s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 856s Selecting previously unselected package x11-common. 856s Preparing to unpack .../057-x11-common_1%3a7.7+23ubuntu3_all.deb ... 856s Unpacking x11-common (1:7.7+23ubuntu3) ... 856s Selecting previously unselected package libice6:armhf. 856s Preparing to unpack .../058-libice6_2%3a1.1.1-1_armhf.deb ... 856s Unpacking libice6:armhf (2:1.1.1-1) ... 856s Selecting previously unselected package libicu-dev:armhf. 856s Preparing to unpack .../059-libicu-dev_76.1-1ubuntu2_armhf.deb ... 856s Unpacking libicu-dev:armhf (76.1-1ubuntu2) ... 857s Selecting previously unselected package libjpeg-turbo8:armhf. 857s Preparing to unpack .../060-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 857s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 857s Selecting previously unselected package libjpeg-turbo8-dev:armhf. 857s Preparing to unpack .../061-libjpeg-turbo8-dev_2.1.5-3ubuntu2_armhf.deb ... 857s Unpacking libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 857s Selecting previously unselected package libjpeg8:armhf. 857s Preparing to unpack .../062-libjpeg8_8c-2ubuntu11_armhf.deb ... 857s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 857s Selecting previously unselected package libjpeg8-dev:armhf. 857s Preparing to unpack .../063-libjpeg8-dev_8c-2ubuntu11_armhf.deb ... 857s Unpacking libjpeg8-dev:armhf (8c-2ubuntu11) ... 857s Selecting previously unselected package libjpeg-dev:armhf. 857s Preparing to unpack .../064-libjpeg-dev_8c-2ubuntu11_armhf.deb ... 857s Unpacking libjpeg-dev:armhf (8c-2ubuntu11) ... 857s Selecting previously unselected package libjs-bootstrap. 857s Preparing to unpack .../065-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 857s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 857s Selecting previously unselected package libjs-popper.js. 857s Preparing to unpack .../066-libjs-popper.js_1.16.1+ds-6_all.deb ... 857s Unpacking libjs-popper.js (1.16.1+ds-6) ... 857s Selecting previously unselected package libjs-bootstrap4. 857s Preparing to unpack .../067-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 857s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 857s Selecting previously unselected package libjs-d3. 857s Preparing to unpack .../068-libjs-d3_3.5.17-4_all.deb ... 857s Unpacking libjs-d3 (3.5.17-4) ... 857s Selecting previously unselected package libjs-es5-shim. 857s Preparing to unpack .../069-libjs-es5-shim_4.6.7-2_all.deb ... 857s Unpacking libjs-es5-shim 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(0.0.3+dfsg-1.1) ... 858s Selecting previously unselected package libjs-jquery-selectize.js. 858s Preparing to unpack .../075-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 858s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 858s Selecting previously unselected package libjs-jquery-ui. 858s Preparing to unpack .../076-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 858s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 858s Selecting previously unselected package libjs-json. 858s Preparing to unpack .../077-libjs-json_0~20221030+~1.0.8-1_all.deb ... 858s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 858s Selecting previously unselected package libjs-prettify. 858s Preparing to unpack .../078-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 858s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 858s Selecting previously unselected package liblapack3:armhf. 858s Preparing to unpack .../079-liblapack3_3.12.1-2_armhf.deb ... 858s Unpacking liblapack3:armhf (3.12.1-2) ... 858s Selecting previously unselected package liblapack-dev:armhf. 858s Preparing to unpack .../080-liblapack-dev_3.12.1-2_armhf.deb ... 858s Unpacking liblapack-dev:armhf (3.12.1-2) ... 858s Selecting previously unselected package liblerc4:armhf. 858s Preparing to unpack .../081-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 858s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 858s Selecting previously unselected package liblua5.4-0:armhf. 858s Preparing to unpack .../082-liblua5.4-0_5.4.7-1_armhf.deb ... 858s Unpacking liblua5.4-0:armhf (5.4.7-1) ... 858s Selecting previously unselected package libncurses-dev:armhf. 858s Preparing to unpack .../083-libncurses-dev_6.5+20250216-2_armhf.deb ... 858s Unpacking libncurses-dev:armhf (6.5+20250216-2) ... 858s Selecting previously unselected package libthai-data. 858s Preparing to unpack .../084-libthai-data_0.1.29-2build1_all.deb ... 858s Unpacking libthai-data (0.1.29-2build1) ... 858s Selecting previously unselected package libthai0:armhf. 858s Preparing to unpack .../085-libthai0_0.1.29-2build1_armhf.deb ... 858s Unpacking libthai0:armhf (0.1.29-2build1) ... 858s Selecting previously unselected package libpango-1.0-0:armhf. 858s Preparing to unpack .../086-libpango-1.0-0_1.56.2-1_armhf.deb ... 858s Unpacking libpango-1.0-0:armhf (1.56.2-1) ... 858s Selecting previously unselected package libpangoft2-1.0-0:armhf. 858s Preparing to unpack .../087-libpangoft2-1.0-0_1.56.2-1_armhf.deb ... 858s Unpacking libpangoft2-1.0-0:armhf (1.56.2-1) ... 858s Selecting previously unselected package libpangocairo-1.0-0:armhf. 858s Preparing to unpack .../088-libpangocairo-1.0-0_1.56.2-1_armhf.deb ... 858s Unpacking libpangocairo-1.0-0:armhf (1.56.2-1) ... 858s Selecting previously unselected package libpaper2:armhf. 858s Preparing to unpack .../089-libpaper2_2.2.5-0.3_armhf.deb ... 858s Unpacking libpaper2:armhf (2.2.5-0.3) ... 858s Selecting previously unselected package libpaper-utils. 858s Preparing to unpack .../090-libpaper-utils_2.2.5-0.3_armhf.deb ... 858s Unpacking libpaper-utils (2.2.5-0.3) ... 858s Selecting previously unselected package libpcre2-16-0:armhf. 858s Preparing to unpack .../091-libpcre2-16-0_10.45-1_armhf.deb ... 858s Unpacking libpcre2-16-0:armhf (10.45-1) ... 858s Selecting previously unselected package libpcre2-32-0:armhf. 858s Preparing to unpack .../092-libpcre2-32-0_10.45-1_armhf.deb ... 858s Unpacking libpcre2-32-0:armhf (10.45-1) ... 859s Selecting previously unselected package libpcre2-posix3:armhf. 859s Preparing to unpack .../093-libpcre2-posix3_10.45-1_armhf.deb ... 859s Unpacking libpcre2-posix3:armhf (10.45-1) ... 859s Selecting previously unselected package libpcre2-dev:armhf. 859s Preparing to unpack .../094-libpcre2-dev_10.45-1_armhf.deb ... 859s Unpacking libpcre2-dev:armhf (10.45-1) ... 859s Selecting previously unselected package libpkgconf3:armhf. 859s Preparing to unpack .../095-libpkgconf3_1.8.1-4_armhf.deb ... 859s Unpacking libpkgconf3:armhf (1.8.1-4) ... 859s Selecting previously unselected package zlib1g-dev:armhf. 859s Preparing to unpack .../096-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 859s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 859s Selecting previously unselected package libpng-dev:armhf. 859s Preparing to unpack .../097-libpng-dev_1.6.47-1_armhf.deb ... 859s Unpacking libpng-dev:armhf (1.6.47-1) ... 859s Selecting previously unselected package libreadline-dev:armhf. 859s Preparing to unpack .../098-libreadline-dev_8.2-6_armhf.deb ... 859s Unpacking libreadline-dev:armhf (8.2-6) ... 859s Selecting previously unselected package libsharpyuv0:armhf. 859s Preparing to unpack .../099-libsharpyuv0_1.5.0-0.1_armhf.deb ... 859s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 859s Selecting previously unselected package libsm6:armhf. 859s Preparing to unpack .../100-libsm6_2%3a1.2.4-1_armhf.deb ... 859s Unpacking libsm6:armhf (2:1.2.4-1) ... 859s Selecting previously unselected package libtcl8.6:armhf. 859s Preparing to unpack .../101-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 859s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 859s Selecting previously unselected package libjbig0:armhf. 859s Preparing to unpack .../102-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 859s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 859s Selecting previously unselected package libwebp7:armhf. 859s Preparing to unpack .../103-libwebp7_1.5.0-0.1_armhf.deb ... 859s Unpacking libwebp7:armhf (1.5.0-0.1) ... 859s Selecting previously unselected package libtiff6:armhf. 859s Preparing to unpack .../104-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 859s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 859s Selecting previously unselected package libxft2:armhf. 859s Preparing to unpack .../105-libxft2_2.3.6-1build1_armhf.deb ... 859s Unpacking libxft2:armhf (2.3.6-1build1) ... 859s Selecting previously unselected package libxss1:armhf. 859s Preparing to unpack .../106-libxss1_1%3a1.2.3-1build3_armhf.deb ... 859s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 859s Selecting previously unselected package libtk8.6:armhf. 859s Preparing to unpack .../107-libtk8.6_8.6.16-1_armhf.deb ... 859s Unpacking libtk8.6:armhf (8.6.16-1) ... 859s Selecting previously unselected package libxt6t64:armhf. 859s Preparing to unpack .../108-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 859s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 859s Selecting previously unselected package zip. 859s Preparing to unpack .../109-zip_3.0-14ubuntu2_armhf.deb ... 859s Unpacking zip (3.0-14ubuntu2) ... 859s Selecting previously unselected package unzip. 859s Preparing to unpack .../110-unzip_6.0-28ubuntu6_armhf.deb ... 859s Unpacking unzip (6.0-28ubuntu6) ... 859s Selecting previously unselected package xdg-utils. 859s Preparing to unpack .../111-xdg-utils_1.2.1-2ubuntu1_all.deb ... 859s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 859s Selecting previously unselected package r-base-core. 859s Preparing to unpack .../112-r-base-core_4.4.3-1_armhf.deb ... 859s Unpacking r-base-core (4.4.3-1) ... 860s Selecting previously unselected package r-cran-littler. 860s Preparing to unpack .../113-r-cran-littler_0.3.20-2_armhf.deb ... 860s Unpacking r-cran-littler (0.3.20-2) ... 860s Selecting previously unselected package littler. 860s Preparing to unpack .../114-littler_0.3.20-2_all.deb ... 860s Unpacking littler (0.3.20-2) ... 860s Selecting previously unselected package node-bootstrap-sass. 860s Preparing to unpack .../115-node-bootstrap-sass_3.4.3-2_all.deb ... 860s Unpacking node-bootstrap-sass (3.4.3-2) ... 860s Selecting previously unselected package node-html5shiv. 860s Preparing to unpack .../116-node-html5shiv_3.7.3+dfsg-5_all.deb ... 860s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 860s Selecting previously unselected package node-normalize.css. 860s Preparing to unpack .../117-node-normalize.css_8.0.1-5_all.deb ... 860s Unpacking node-normalize.css (8.0.1-5) ... 860s Selecting previously unselected package pandoc-data. 860s Preparing to unpack .../118-pandoc-data_3.1.11.1-3build1_all.deb ... 860s Unpacking pandoc-data (3.1.11.1-3build1) ... 860s Selecting previously unselected package pandoc. 860s Preparing to unpack .../119-pandoc_3.1.11.1+ds-2_armhf.deb ... 860s Unpacking pandoc (3.1.11.1+ds-2) ... 862s Selecting previously unselected package liblzma-dev:armhf. 862s Preparing to unpack .../120-liblzma-dev_5.6.4-1_armhf.deb ... 862s Unpacking liblzma-dev:armhf (5.6.4-1) ... 862s Selecting previously unselected package pkgconf-bin. 862s Preparing to unpack .../121-pkgconf-bin_1.8.1-4_armhf.deb ... 862s Unpacking pkgconf-bin (1.8.1-4) ... 862s Selecting previously unselected package pkgconf:armhf. 862s Preparing to unpack .../122-pkgconf_1.8.1-4_armhf.deb ... 862s Unpacking pkgconf:armhf (1.8.1-4) ... 862s Selecting previously unselected package libtirpc-dev:armhf. 862s Preparing to unpack .../123-libtirpc-dev_1.3.4+ds-1.3_armhf.deb ... 862s Unpacking libtirpc-dev:armhf (1.3.4+ds-1.3) ... 862s Selecting previously unselected package r-base-dev. 862s Preparing to unpack .../124-r-base-dev_4.4.3-1_all.deb ... 862s Unpacking r-base-dev (4.4.3-1) ... 862s Selecting previously unselected package pkg-r-autopkgtest. 862s Preparing to unpack .../125-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 862s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 862s Selecting previously unselected package r-cran-base64enc. 862s Preparing to unpack .../126-r-cran-base64enc_0.1-3-3_armhf.deb ... 862s Unpacking r-cran-base64enc (0.1-3-3) ... 862s Selecting previously unselected package r-cran-brio. 862s Preparing to unpack .../127-r-cran-brio_1.1.5-1_armhf.deb ... 862s Unpacking r-cran-brio (1.1.5-1) ... 862s Selecting previously unselected package r-cran-rlang. 862s Preparing to unpack .../128-r-cran-rlang_1.1.5-1_armhf.deb ... 862s Unpacking r-cran-rlang (1.1.5-1) ... 862s Selecting previously unselected package r-cran-fastmap. 862s Preparing to unpack .../129-r-cran-fastmap_1.2.0-1_armhf.deb ... 862s Unpacking r-cran-fastmap (1.2.0-1) ... 862s Selecting previously unselected package r-cran-cachem. 862s Preparing to unpack .../130-r-cran-cachem_1.1.0-1_armhf.deb ... 862s Unpacking r-cran-cachem (1.1.0-1) ... 862s Selecting previously unselected package r-cran-digest. 862s Preparing to unpack .../131-r-cran-digest_0.6.37-1_armhf.deb ... 862s Unpacking r-cran-digest (0.6.37-1) ... 862s Selecting previously unselected package r-cran-htmltools. 862s Preparing to unpack .../132-r-cran-htmltools_0.5.8.1-1_armhf.deb ... 862s Unpacking r-cran-htmltools (0.5.8.1-1) ... 862s Selecting previously unselected package r-cran-jquerylib. 862s Preparing to unpack .../133-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 862s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 862s Selecting previously unselected package r-cran-jsonlite. 862s Preparing to unpack .../134-r-cran-jsonlite_1.9.1+dfsg-1_armhf.deb ... 862s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 862s Selecting previously unselected package r-cran-cli. 863s Preparing to unpack .../135-r-cran-cli_3.6.4-1_armhf.deb ... 863s Unpacking r-cran-cli (3.6.4-1) ... 863s Selecting previously unselected package r-cran-glue. 863s Preparing to unpack .../136-r-cran-glue_1.8.0-1_armhf.deb ... 863s Unpacking r-cran-glue (1.8.0-1) ... 863s Selecting previously unselected package r-cran-lifecycle. 863s Preparing to unpack .../137-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 863s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 863s Selecting previously unselected package r-cran-memoise. 863s Preparing to unpack .../138-r-cran-memoise_2.0.1-1_all.deb ... 863s Unpacking r-cran-memoise (2.0.1-1) ... 863s Selecting previously unselected package r-cran-mime. 863s Preparing to unpack .../139-r-cran-mime_0.12-2_armhf.deb ... 863s Unpacking r-cran-mime (0.12-2) ... 863s Selecting previously unselected package r-cran-fs. 863s Preparing to unpack .../140-r-cran-fs_1.6.5+dfsg-1_armhf.deb ... 863s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 863s Selecting previously unselected package r-cran-r6. 863s Preparing to unpack .../141-r-cran-r6_2.6.1-1_all.deb ... 863s Unpacking r-cran-r6 (2.6.1-1) ... 863s Selecting previously unselected package r-cran-rappdirs. 863s Preparing to unpack .../142-r-cran-rappdirs_0.3.3-1_armhf.deb ... 863s Unpacking r-cran-rappdirs (0.3.3-1) ... 863s Selecting previously unselected package r-cran-sass. 863s Preparing to unpack .../143-r-cran-sass_0.4.9+dfsg-1_armhf.deb ... 863s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 863s Selecting previously unselected package r-cran-bslib. 863s Preparing to unpack .../144-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 863s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 863s Selecting previously unselected package r-cran-ps. 863s Preparing to unpack .../145-r-cran-ps_1.9.0-1_armhf.deb ... 863s Unpacking r-cran-ps (1.9.0-1) ... 863s Selecting previously unselected package r-cran-processx. 863s Preparing to unpack .../146-r-cran-processx_3.8.6-1_armhf.deb ... 863s Unpacking r-cran-processx (3.8.6-1) ... 863s Selecting previously unselected package r-cran-callr. 863s Preparing to unpack .../147-r-cran-callr_3.7.6-1_all.deb ... 863s Unpacking r-cran-callr (3.7.6-1) ... 863s Selecting previously unselected package r-cran-commonmark. 863s Preparing to unpack .../148-r-cran-commonmark_1.9.2-2_armhf.deb ... 863s Unpacking r-cran-commonmark (1.9.2-2) ... 863s Selecting previously unselected package r-cran-crayon. 863s Preparing to unpack .../149-r-cran-crayon_1.5.3-1_all.deb ... 863s Unpacking r-cran-crayon (1.5.3-1) ... 864s Selecting previously unselected package r-cran-desc. 864s Preparing to unpack .../150-r-cran-desc_1.4.3-1_all.deb ... 864s Unpacking r-cran-desc (1.4.3-1) ... 864s Selecting previously unselected package r-cran-diffobj. 864s Preparing to unpack .../151-r-cran-diffobj_0.3.5-1_armhf.deb ... 864s Unpacking r-cran-diffobj (0.3.5-1) ... 864s Selecting previously unselected package r-cran-dotcall64. 864s Preparing to unpack .../152-r-cran-dotcall64_1.2-1_armhf.deb ... 864s Unpacking r-cran-dotcall64 (1.2-1) ... 864s Selecting previously unselected package r-cran-evaluate. 864s Preparing to unpack .../153-r-cran-evaluate_1.0.3-1_all.deb ... 864s Unpacking r-cran-evaluate (1.0.3-1) ... 864s Selecting previously unselected package r-cran-evd. 864s Preparing to unpack .../154-r-cran-evd_2.3-7.1-1_armhf.deb ... 864s Unpacking r-cran-evd (2.3-7.1-1) ... 864s Selecting previously unselected package r-cran-pkgkitten. 864s Preparing to unpack .../155-r-cran-pkgkitten_0.2.4-1_all.deb ... 864s Unpacking r-cran-pkgkitten (0.2.4-1) ... 864s Selecting previously unselected package r-cran-rcpp. 864s Preparing to unpack .../156-r-cran-rcpp_1.0.14-1_armhf.deb ... 864s Unpacking r-cran-rcpp (1.0.14-1) ... 864s Selecting previously unselected package r-cran-spam. 864s Preparing to unpack .../157-r-cran-spam_2.11-1-1_armhf.deb ... 864s Unpacking r-cran-spam (2.11-1-1) ... 864s Selecting previously unselected package r-cran-viridislite. 864s Preparing to unpack .../158-r-cran-viridislite_0.4.2-2_all.deb ... 864s Unpacking r-cran-viridislite (0.4.2-2) ... 864s Selecting previously unselected package r-cran-maps. 864s Preparing to unpack .../159-r-cran-maps_3.4.2.1-1_armhf.deb ... 864s Unpacking r-cran-maps (3.4.2.1-1) ... 864s Selecting previously unselected package r-cran-fields. 864s Preparing to unpack .../160-r-cran-fields_16.3.1-1_armhf.deb ... 864s Unpacking r-cran-fields (16.3.1-1) ... 864s Selecting previously unselected package r-cran-fontawesome. 864s Preparing to unpack .../161-r-cran-fontawesome_0.5.3-1_all.deb ... 864s Unpacking r-cran-fontawesome (0.5.3-1) ... 864s Selecting previously unselected package r-cran-xfun. 864s Preparing to unpack .../162-r-cran-xfun_0.51+dfsg-1_armhf.deb ... 864s Unpacking r-cran-xfun (0.51+dfsg-1) ... 864s Selecting previously unselected package r-cran-highr. 864s Preparing to unpack .../163-r-cran-highr_0.11+dfsg-1_all.deb ... 864s Unpacking r-cran-highr (0.11+dfsg-1) ... 864s Selecting previously unselected package r-cran-later. 865s Preparing to unpack .../164-r-cran-later_1.4.1+dfsg-1_armhf.deb ... 865s Unpacking r-cran-later (1.4.1+dfsg-1) ... 865s Selecting previously unselected package r-cran-magrittr. 865s Preparing to unpack .../165-r-cran-magrittr_2.0.3-1_armhf.deb ... 865s Unpacking r-cran-magrittr (2.0.3-1) ... 865s Selecting previously unselected package r-cran-promises. 865s Preparing to unpack .../166-r-cran-promises_1.3.2+dfsg-1_armhf.deb ... 865s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 865s Selecting previously unselected package r-cran-httpuv. 865s Preparing to unpack .../167-r-cran-httpuv_1.6.15+dfsg-1_armhf.deb ... 865s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 865s Selecting previously unselected package r-cran-yaml. 865s Preparing to unpack .../168-r-cran-yaml_2.3.10-1_armhf.deb ... 865s Unpacking r-cran-yaml (2.3.10-1) ... 865s Selecting previously unselected package libjs-mathjax. 865s Preparing to unpack .../169-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 865s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 865s Selecting previously unselected package r-cran-knitr. 865s Preparing to unpack .../170-r-cran-knitr_1.49+dfsg-1_all.deb ... 865s Unpacking r-cran-knitr (1.49+dfsg-1) ... 866s Selecting previously unselected package r-cran-lattice. 866s Preparing to unpack .../171-r-cran-lattice_0.22-6-1_armhf.deb ... 866s Unpacking r-cran-lattice (0.22-6-1) ... 866s Selecting previously unselected package r-cran-matrix. 866s Preparing to unpack .../172-r-cran-matrix_1.7-3-1_armhf.deb ... 866s Unpacking r-cran-matrix (1.7-3-1) ... 866s Selecting previously unselected package r-cran-pkgbuild. 866s Preparing to unpack .../173-r-cran-pkgbuild_1.4.6-1_all.deb ... 866s Unpacking r-cran-pkgbuild (1.4.6-1) ... 866s Selecting previously unselected package r-cran-rprojroot. 866s Preparing to unpack .../174-r-cran-rprojroot_2.0.4-2_all.deb ... 866s Unpacking r-cran-rprojroot (2.0.4-2) ... 866s Selecting previously unselected package r-cran-withr. 866s Preparing to unpack .../175-r-cran-withr_3.0.2+dfsg-1_all.deb ... 866s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 866s Selecting previously unselected package r-cran-pkgload. 866s Preparing to unpack .../176-r-cran-pkgload_1.4.0-1_all.deb ... 866s Unpacking r-cran-pkgload (1.4.0-1) ... 866s Selecting previously unselected package r-cran-praise. 866s Preparing to unpack .../177-r-cran-praise_1.0.0-4build1_all.deb ... 866s Unpacking r-cran-praise (1.0.0-4build1) ... 866s Selecting previously unselected package r-cran-tinytex. 866s Preparing to unpack .../178-r-cran-tinytex_0.56-1_all.deb ... 866s Unpacking r-cran-tinytex (0.56-1) ... 866s Selecting previously unselected package libjs-modernizr. 866s Preparing to unpack .../179-libjs-modernizr_3.13.0-0.1_all.deb ... 866s Unpacking libjs-modernizr (3.13.0-0.1) ... 866s Selecting previously unselected package r-cran-xtable. 866s Preparing to unpack .../180-r-cran-xtable_1%3a1.8-4-2_all.deb ... 866s Unpacking r-cran-xtable (1:1.8-4-2) ... 866s Selecting previously unselected package r-cran-sourcetools. 866s Preparing to unpack .../181-r-cran-sourcetools_0.1.7-1-1_armhf.deb ... 866s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 866s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 866s Preparing to unpack .../182-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 866s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 866s Selecting previously unselected package r-cran-shiny. 866s Preparing to unpack .../183-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 866s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 866s Selecting previously unselected package r-cran-rmarkdown. 866s Preparing to unpack .../184-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 866s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 867s Selecting previously unselected package r-cran-waldo. 867s Preparing to unpack .../185-r-cran-waldo_0.6.1-2_all.deb ... 867s Unpacking r-cran-waldo (0.6.1-2) ... 867s Selecting previously unselected package r-cran-testthat. 867s Preparing to unpack .../186-r-cran-testthat_3.2.3-1_armhf.deb ... 867s Unpacking r-cran-testthat (3.2.3-1) ... 867s Selecting previously unselected package r-cran-truncdist. 867s Preparing to unpack .../187-r-cran-truncdist_1.0-2-4build1_all.deb ... 867s Unpacking r-cran-truncdist (1.0-2-4build1) ... 867s Setting up libjs-json (0~20221030+~1.0.8-1) ... 867s Setting up javascript-common (12) ... 867s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 867s Setting up libpixman-1-0:armhf (0.44.0-3) ... 867s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 867s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 867s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 867s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 867s Setting up libxrender1:armhf (1:0.9.10-1.1build1) ... 867s Setting up libdatrie1:armhf (0.2.13-3build1) ... 867s Setting up libjs-popper.js (1.16.1+ds-6) ... 867s Setting up libxcb-render0:armhf (1.17.0-2) ... 867s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 867s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 867s Setting up unzip (6.0-28ubuntu6) ... 867s Setting up x11-common (1:7.7+23ubuntu3) ... 867s Setting up node-html5shiv (3.7.3+dfsg-5) ... 867s Setting up libdeflate0:armhf (1.23-1) ... 867s Setting up linux-libc-dev:armhf (6.14.0-10.10) ... 867s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 867s Setting up libxcb-shm0:armhf (1.17.0-2) ... 867s Setting up libgomp1:armhf (15-20250222-0ubuntu1) ... 867s Setting up libjs-modernizr (3.13.0-0.1) ... 867s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 867s Setting up libpcre2-16-0:armhf (10.45-1) ... 867s Setting up libjs-es5-shim (4.6.7-2) ... 867s Setting up zip (3.0-14ubuntu2) ... 867s Setting up libpcre2-32-0:armhf (10.45-1) ... 867s Setting up libblas3:armhf 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Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 867s Setting up xdg-utils (1.2.1-2ubuntu1) ... 867s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 867s Setting up libcc1-0:armhf (15-20250222-0ubuntu1) ... 867s Setting up libblas-dev:armhf (3.12.1-2) ... 867s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode 867s Setting up dctrl-tools (2.24-3build3) ... 867s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 867s Setting up cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 867s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 867s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 867s Setting up libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 867s Setting up libice6:armhf (2:1.1.1-1) ... 868s Setting up liblapack3:armhf (3.12.1-2) ... 868s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 868s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 868s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 868s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 868s Setting up libpaper-utils (2.2.5-0.3) ... 868s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 868s Setting up pkgconf:armhf (1.8.1-4) ... 868s Setting up libthai0:armhf (0.1.29-2build1) ... 868s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 868s Setting up pandoc (3.1.11.1+ds-2) ... 868s Setting up liblapack-dev:armhf (3.12.1-2) ... 868s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode 868s Setting up cpp-14 (14.2.0-17ubuntu3) ... 868s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 868s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 868s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 868s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 868s Setting up libsm6:armhf (2:1.2.4-1) ... 868s Setting up libicu-dev:armhf (76.1-1ubuntu2) ... 868s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 868s Setting up gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 868s Setting up libbz2-dev:armhf (1.0.8-6) ... 868s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 868s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 868s Setting up fontconfig (2.15.0-2ubuntu1) ... 870s Regenerating fonts cache... done. 870s Setting up libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 870s Setting up libxft2:armhf (2.3.6-1build1) ... 870s Setting up libncurses-dev:armhf (6.5+20250216-2) ... 870s Setting up libpcre2-dev:armhf (10.45-1) ... 870s Setting up libtk8.6:armhf (8.6.16-1) ... 870s Setting up libpango-1.0-0:armhf (1.56.2-1) ... 870s Setting up libreadline-dev:armhf (8.2-6) ... 870s Setting up libcairo2:armhf (1.18.2-2) ... 870s Setting up gcc-14 (14.2.0-17ubuntu3) ... 870s Setting up gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 870s Setting up libxt6t64:armhf (1:1.2.1-1.2build1) ... 870s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 870s Setting up cpp (4:14.2.0-1ubuntu1) ... 870s Setting up g++-14 (14.2.0-17ubuntu3) ... 870s Setting up libpangoft2-1.0-0:armhf (1.56.2-1) ... 870s Setting up libjpeg8-dev:armhf (8c-2ubuntu11) ... 870s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 870s Setting up libpangocairo-1.0-0:armhf (1.56.2-1) ... 870s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 870s Setting up libpng-dev:armhf (1.6.47-1) ... 870s Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... 870s Setting up gcc (4:14.2.0-1ubuntu1) ... 870s Setting up r-base-core (4.4.3-1) ... 870s Creating config file /etc/R/Renviron with new version 870s Setting up r-cran-crayon (1.5.3-1) ... 870s Setting up r-cran-sourcetools (0.1.7-1-1) ... 870s Setting up r-cran-lattice (0.22-6-1) ... 870s Setting up r-cran-ps (1.9.0-1) ... 870s Setting up g++ (4:14.2.0-1ubuntu1) ... 870s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 870s Setting up r-cran-viridislite (0.4.2-2) ... 870s Setting up build-essential (12.10ubuntu1) ... 870s Setting up r-cran-commonmark (1.9.2-2) ... 870s Setting up r-cran-r6 (2.6.1-1) ... 870s Setting up r-cran-pkgkitten (0.2.4-1) ... 870s Setting up r-cran-magrittr (2.0.3-1) ... 870s Setting up r-cran-rappdirs (0.3.3-1) ... 870s Setting up r-cran-evd (2.3-7.1-1) ... 870s Setting up r-cran-littler (0.3.20-2) ... 870s Setting up r-cran-fs (1.6.5+dfsg-1) ... 870s Setting up r-cran-rcpp (1.0.14-1) ... 870s Setting up r-cran-brio (1.1.5-1) ... 870s Setting up r-cran-diffobj (0.3.5-1) ... 870s Setting up r-cran-maps (3.4.2.1-1) ... 870s Setting up r-cran-rlang (1.1.5-1) ... 870s Setting up littler (0.3.20-2) ... 870s Setting up r-cran-xfun (0.51+dfsg-1) ... 870s Setting up r-cran-withr (3.0.2+dfsg-1) ... 870s Setting up r-cran-processx (3.8.6-1) ... 870s Setting up r-cran-mime (0.12-2) ... 870s Setting up r-cran-praise (1.0.0-4build1) ... 870s Setting up r-cran-base64enc (0.1-3-3) ... 870s Setting up r-cran-digest (0.6.37-1) ... 870s Setting up r-cran-yaml (2.3.10-1) ... 870s Setting up r-cran-evaluate (1.0.3-1) ... 870s Setting up r-cran-highr (0.11+dfsg-1) ... 870s Setting up r-cran-truncdist (1.0-2-4build1) ... 870s Setting up r-cran-glue (1.8.0-1) ... 870s Setting up r-cran-xtable (1:1.8-4-2) ... 870s Setting up r-cran-cli (3.6.4-1) ... 870s Setting up gfortran (4:14.2.0-1ubuntu1) ... 870s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 870s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 870s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 870s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 870s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 870s Setting up r-cran-dotcall64 (1.2-1) ... 870s Setting up r-cran-rprojroot (2.0.4-2) ... 870s Setting up r-cran-fastmap (1.2.0-1) ... 870s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 870s Setting up r-cran-waldo (0.6.1-2) ... 870s Setting up r-cran-later (1.4.1+dfsg-1) ... 870s Setting up r-cran-matrix (1.7-3-1) ... 870s Setting up r-cran-htmltools (0.5.8.1-1) ... 870s Setting up r-cran-tinytex (0.56-1) ... 870s Setting up r-cran-knitr (1.49+dfsg-1) ... 870s Setting up r-cran-cachem (1.1.0-1) ... 870s Setting up r-cran-sass (0.4.9+dfsg-1) ... 870s Setting up r-cran-spam (2.11-1-1) ... 870s Setting up r-cran-fields (16.3.1-1) ... 870s Setting up r-base-dev (4.4.3-1) ... 870s Setting up r-cran-callr (3.7.6-1) ... 870s Setting up r-cran-desc (1.4.3-1) ... 870s Setting up r-cran-fontawesome (0.5.3-1) ... 870s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 870s Setting up r-cran-memoise (2.0.1-1) ... 870s Setting up r-cran-promises (1.3.2+dfsg-1) ... 870s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 870s Setting up r-cran-pkgbuild (1.4.6-1) ... 870s Setting up r-cran-pkgload (1.4.0-1) ... 870s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 870s Setting up r-cran-testthat (3.2.3-1) ... 870s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 870s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 870s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 870s Processing triggers for libc-bin (2.41-1ubuntu2) ... 870s Processing triggers for man-db (2.13.0-1) ... 872s Processing triggers for install-info (7.1.1-1) ... 886s autopkgtest [16:53:54]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 886s autopkgtest [16:53:54]: test pkg-r-autopkgtest: [----------------------- 888s Test: Try to load the R library spam 888s 888s R version 4.4.3 (2025-02-28) -- "Trophy Case" 888s Copyright (C) 2025 The R Foundation for Statistical Computing 888s Platform: arm-unknown-linux-gnueabihf (32-bit) 888s 888s R is free software and comes with ABSOLUTELY NO WARRANTY. 888s You are welcome to redistribute it under certain conditions. 888s Type 'license()' or 'licence()' for distribution details. 888s 888s R is a collaborative project with many contributors. 888s Type 'contributors()' for more information and 888s 'citation()' on how to cite R or R packages in publications. 888s 888s Type 'demo()' for some demos, 'help()' for on-line help, or 888s 'help.start()' for an HTML browser interface to help. 888s Type 'q()' to quit R. 888s 888s > library('spam') 889s Spam version 2.11-1 (2025-01-20) is loaded. 889s Type 'help( Spam)' or 'demo( spam)' for a short introduction 889s and overview of this package. 889s Help for individual functions is also obtained by adding the 889s suffix '.spam' to the function name, e.g. 'help( chol.spam)'. 889s 889s Attaching package: ‘spam’ 889s 889s > 889s > 889s The following objects are masked from ‘package:base’: 889s 889s backsolve, forwardsolve 889s 889s Other tests are currently unsupported! 889s They will be progressively added. 889s autopkgtest [16:53:57]: test pkg-r-autopkgtest: -----------------------] 893s pkg-r-autopkgtest PASS 893s autopkgtest [16:54:01]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 898s autopkgtest [16:54:06]: @@@@@@@@@@@@@@@@@@@@ summary 898s run-unit-test PASS 898s pkg-r-autopkgtest PASS