0s autopkgtest [16:28:44]: starting date and time: 2025-03-15 16:28:44+0000 0s autopkgtest [16:28:44]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:28:44]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._fmfpgoi/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-psychotools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.142 lxd-armhf-10.145.243.142:autopkgtest/ubuntu/plucky/armhf 20s autopkgtest [16:29:04]: testbed dpkg architecture: armhf 22s autopkgtest [16:29:06]: testbed apt version: 2.9.33 25s autopkgtest [16:29:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 27s autopkgtest [16:29:11]: testbed release detected to be: None 34s autopkgtest [16:29:18]: updating testbed package index (apt update) 36s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 36s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 37s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 37s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 37s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 37s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 38s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 38s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 38s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 38s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 38s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 38s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 38s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 38s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 38s Get:15 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 63s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 64s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 65s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 67s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 67s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 67s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 86s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 88s Fetched 41.0 MB in 52s (795 kB/s) 89s Reading package lists... 95s autopkgtest [16:30:19]: upgrading testbed (apt dist-upgrade and autopurge) 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 99s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 99s Starting 2 pkgProblemResolver with broken count: 0 99s Done 100s Entering ResolveByKeep 100s 101s Calculating upgrade... 101s The following packages will be upgraded: 101s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 101s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Need to get 8683 kB of archives. 101s After this operation, 23.6 kB of additional disk space will be used. 101s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 104s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 110s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 110s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 111s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 111s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 112s Preconfiguring packages ... 112s Fetched 8683 kB in 10s (870 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 112s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 112s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 112s Setting up libc6:armhf (2.41-1ubuntu2) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 113s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 113s Setting up libc-bin (2.41-1ubuntu2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 113s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 113s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 113s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 113s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 113s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 113s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 113s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 113s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 114s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 114s Setting up sos (4.9.0-5) ... 115s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 115s Setting up locales (2.41-1ubuntu2) ... 116s Generating locales (this might take a while)... 118s en_US.UTF-8... done 118s Generation complete. 118s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 118s Setting up strace (6.13+ds-1ubuntu1) ... 118s Processing triggers for man-db (2.13.0-1) ... 119s Processing triggers for systemd (257.3-1ubuntu3) ... 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 122s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 123s Solving dependencies... 124s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s autopkgtest [16:30:49]: rebooting testbed after setup commands that affected boot 165s autopkgtest [16:31:29]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 190s autopkgtest [16:31:54]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-psychotools 200s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-psychotools 0.7-4-1 (dsc) [2183 B] 200s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-psychotools 0.7-4-1 (tar) [439 kB] 200s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-psychotools 0.7-4-1 (diff) [3252 B] 200s gpgv: Signature made Wed Jan 22 23:40:08 2025 UTC 200s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 200s gpgv: issuer "plessy@debian.org" 200s gpgv: Can't check signature: No public key 200s dpkg-source: warning: cannot verify inline signature for ./r-cran-psychotools_0.7-4-1.dsc: no acceptable signature found 200s autopkgtest [16:32:04]: testing package r-cran-psychotools version 0.7-4-1 202s autopkgtest [16:32:06]: build not needed 206s autopkgtest [16:32:10]: test run-unit-test: preparing testbed 208s Reading package lists... 208s Building dependency tree... 208s Reading state information... 208s Starting pkgProblemResolver with broken count: 0 208s Starting 2 pkgProblemResolver with broken count: 0 208s Done 209s The following NEW packages will be installed: 209s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 209s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5 209s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 209s libjpeg8 liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 209s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 209s libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 209s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core 209s r-cran-codetools r-cran-formula r-cran-lattice r-cran-mass r-cran-matrix 209s r-cran-multcomp r-cran-mvtnorm r-cran-psychotools r-cran-sandwich 209s r-cran-survival r-cran-th.data r-cran-zoo unzip x11-common xdg-utils zip 209s 0 upgraded, 57 newly installed, 0 to remove and 0 not upgraded. 209s Need to get 66.4 MB of archives. 209s After this operation, 107 MB of additional disk space will be used. 209s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 210s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 211s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 211s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 211s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 212s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 212s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 212s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 212s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 212s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 212s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 212s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 213s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 213s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 213s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 213s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 213s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 213s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 214s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 214s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 214s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 214s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 214s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 216s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 216s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libthai-data all 0.1.29-2build1 [158 kB] 216s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 216s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libpango-1.0-0 armhf 1.56.2-1 [216 kB] 216s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libpangoft2-1.0-0 armhf 1.56.2-1 [43.6 kB] 216s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf libpangocairo-1.0-0 armhf 1.56.2-1 [25.1 kB] 216s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper2 armhf 2.2.5-0.3 [16.3 kB] 216s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper-utils armhf 2.2.5-0.3 [14.2 kB] 216s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 216s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 216s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 217s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 217s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 218s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 218s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 218s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 218s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 219s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 219s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf zip armhf 3.0-14ubuntu2 [164 kB] 219s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf unzip armhf 6.0-28ubuntu6 [167 kB] 219s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 219s Get:45 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-core armhf 4.4.3-1 [28.2 MB] 248s Get:46 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-codetools all 0.2-20-1 [90.5 kB] 248s Get:47 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-formula all 1.2-5-1 [158 kB] 248s Get:48 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 250s Get:49 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mass armhf 7.3-64-1 [1105 kB] 251s Get:50 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-matrix armhf 1.7-3-1 [4039 kB] 255s Get:51 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mvtnorm armhf 1.3-3-1 [915 kB] 256s Get:52 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-survival armhf 3.8-3-1 [8196 kB] 264s Get:53 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-th.data all 1.1-3-1 [8723 kB] 273s Get:54 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-zoo armhf 1.8-13-1 [996 kB] 274s Get:55 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-sandwich all 3.1-1-1 [1483 kB] 276s Get:56 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-multcomp all 1.4-28-1 [700 kB] 277s Get:57 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-psychotools armhf 0.7-4-1 [1092 kB] 278s Preconfiguring packages ... 278s Fetched 66.4 MB in 1min 8s (971 kB/s) 278s Selecting previously unselected package libfreetype6:armhf. 278s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 278s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 278s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 278s Selecting previously unselected package fonts-dejavu-mono. 278s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 278s Unpacking fonts-dejavu-mono (2.37-8) ... 278s Selecting previously unselected package fonts-dejavu-core. 278s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 278s Unpacking fonts-dejavu-core (2.37-8) ... 279s Selecting previously unselected package fontconfig-config. 279s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 279s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 279s Selecting previously unselected package libfontconfig1:armhf. 279s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 279s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 279s Selecting previously unselected package fontconfig. 279s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 279s Unpacking fontconfig (2.15.0-2ubuntu1) ... 279s Selecting previously unselected package libblas3:armhf. 279s Preparing to unpack .../06-libblas3_3.12.1-2_armhf.deb ... 279s Unpacking libblas3:armhf (3.12.1-2) ... 279s Selecting previously unselected package libpixman-1-0:armhf. 279s Preparing to unpack .../07-libpixman-1-0_0.44.0-3_armhf.deb ... 279s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 279s Selecting previously unselected package libxcb-render0:armhf. 279s Preparing to unpack .../08-libxcb-render0_1.17.0-2_armhf.deb ... 279s Unpacking libxcb-render0:armhf (1.17.0-2) ... 279s Selecting previously unselected package libxcb-shm0:armhf. 279s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_armhf.deb ... 279s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 279s Selecting previously unselected package libxrender1:armhf. 279s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 279s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 279s Selecting previously unselected package libcairo2:armhf. 279s Preparing to unpack .../11-libcairo2_1.18.2-2_armhf.deb ... 279s Unpacking libcairo2:armhf (1.18.2-2) ... 279s Selecting previously unselected package libdatrie1:armhf. 279s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_armhf.deb ... 279s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 279s Selecting previously unselected package libdeflate0:armhf. 279s Preparing to unpack .../13-libdeflate0_1.23-1_armhf.deb ... 279s Unpacking libdeflate0:armhf (1.23-1) ... 279s Selecting previously unselected package libgfortran5:armhf. 279s Preparing to unpack .../14-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 279s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 279s Selecting previously unselected package libgomp1:armhf. 279s Preparing to unpack .../15-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 279s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 279s Selecting previously unselected package libgraphite2-3:armhf. 279s Preparing to unpack .../16-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 279s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 279s Selecting previously unselected package libharfbuzz0b:armhf. 279s Preparing to unpack .../17-libharfbuzz0b_10.2.0-1_armhf.deb ... 279s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 279s Selecting previously unselected package x11-common. 280s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu3_all.deb ... 280s Unpacking x11-common (1:7.7+23ubuntu3) ... 280s Selecting previously unselected package libice6:armhf. 280s Preparing to unpack .../19-libice6_2%3a1.1.1-1_armhf.deb ... 280s Unpacking libice6:armhf (2:1.1.1-1) ... 280s Selecting previously unselected package libjpeg-turbo8:armhf. 280s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 280s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 280s Selecting previously unselected package libjpeg8:armhf. 280s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_armhf.deb ... 280s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 280s Selecting previously unselected package liblapack3:armhf. 280s Preparing to unpack .../22-liblapack3_3.12.1-2_armhf.deb ... 280s Unpacking liblapack3:armhf (3.12.1-2) ... 280s Selecting previously unselected package liblerc4:armhf. 280s Preparing to unpack .../23-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 280s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 280s Selecting previously unselected package libthai-data. 280s Preparing to unpack .../24-libthai-data_0.1.29-2build1_all.deb ... 280s Unpacking libthai-data (0.1.29-2build1) ... 280s Selecting previously unselected package libthai0:armhf. 280s Preparing to unpack .../25-libthai0_0.1.29-2build1_armhf.deb ... 280s Unpacking libthai0:armhf (0.1.29-2build1) ... 280s Selecting previously unselected package libpango-1.0-0:armhf. 280s Preparing to unpack .../26-libpango-1.0-0_1.56.2-1_armhf.deb ... 280s Unpacking libpango-1.0-0:armhf (1.56.2-1) ... 280s Selecting previously unselected package libpangoft2-1.0-0:armhf. 280s Preparing to unpack .../27-libpangoft2-1.0-0_1.56.2-1_armhf.deb ... 280s Unpacking libpangoft2-1.0-0:armhf (1.56.2-1) ... 280s Selecting previously unselected package libpangocairo-1.0-0:armhf. 280s Preparing to unpack .../28-libpangocairo-1.0-0_1.56.2-1_armhf.deb ... 280s Unpacking libpangocairo-1.0-0:armhf (1.56.2-1) ... 280s Selecting previously unselected package libpaper2:armhf. 280s Preparing to unpack .../29-libpaper2_2.2.5-0.3_armhf.deb ... 280s Unpacking libpaper2:armhf (2.2.5-0.3) ... 280s Selecting previously unselected package libpaper-utils. 280s Preparing to unpack .../30-libpaper-utils_2.2.5-0.3_armhf.deb ... 280s Unpacking libpaper-utils (2.2.5-0.3) ... 280s Selecting previously unselected package libsharpyuv0:armhf. 280s Preparing to unpack .../31-libsharpyuv0_1.5.0-0.1_armhf.deb ... 280s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 280s Selecting previously unselected package libsm6:armhf. 280s Preparing to unpack .../32-libsm6_2%3a1.2.4-1_armhf.deb ... 280s Unpacking libsm6:armhf (2:1.2.4-1) ... 280s Selecting previously unselected package libtcl8.6:armhf. 280s Preparing to unpack .../33-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 280s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 280s Selecting previously unselected package libjbig0:armhf. 280s Preparing to unpack .../34-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 280s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 280s Selecting previously unselected package libwebp7:armhf. 281s Preparing to unpack .../35-libwebp7_1.5.0-0.1_armhf.deb ... 281s Unpacking libwebp7:armhf (1.5.0-0.1) ... 281s Selecting previously unselected package libtiff6:armhf. 281s Preparing to unpack .../36-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 281s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 281s Selecting previously unselected package libxft2:armhf. 281s Preparing to unpack .../37-libxft2_2.3.6-1build1_armhf.deb ... 281s Unpacking libxft2:armhf (2.3.6-1build1) ... 281s Selecting previously unselected package libxss1:armhf. 281s Preparing to unpack .../38-libxss1_1%3a1.2.3-1build3_armhf.deb ... 281s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 281s Selecting previously unselected package libtk8.6:armhf. 281s Preparing to unpack .../39-libtk8.6_8.6.16-1_armhf.deb ... 281s Unpacking libtk8.6:armhf (8.6.16-1) ... 281s Selecting previously unselected package libxt6t64:armhf. 281s Preparing to unpack .../40-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 281s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 281s Selecting previously unselected package zip. 281s Preparing to unpack .../41-zip_3.0-14ubuntu2_armhf.deb ... 281s Unpacking zip (3.0-14ubuntu2) ... 281s Selecting previously unselected package unzip. 281s Preparing to unpack .../42-unzip_6.0-28ubuntu6_armhf.deb ... 281s Unpacking unzip (6.0-28ubuntu6) ... 281s Selecting previously unselected package xdg-utils. 281s Preparing to unpack .../43-xdg-utils_1.2.1-2ubuntu1_all.deb ... 281s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 281s Selecting previously unselected package r-base-core. 281s Preparing to unpack .../44-r-base-core_4.4.3-1_armhf.deb ... 281s Unpacking r-base-core (4.4.3-1) ... 282s Selecting previously unselected package r-cran-codetools. 282s Preparing to unpack .../45-r-cran-codetools_0.2-20-1_all.deb ... 282s Unpacking r-cran-codetools (0.2-20-1) ... 282s Selecting previously unselected package r-cran-formula. 282s Preparing to unpack .../46-r-cran-formula_1.2-5-1_all.deb ... 282s Unpacking r-cran-formula (1.2-5-1) ... 282s Selecting previously unselected package r-cran-lattice. 282s Preparing to unpack .../47-r-cran-lattice_0.22-6-1_armhf.deb ... 282s Unpacking r-cran-lattice (0.22-6-1) ... 282s Selecting previously unselected package r-cran-mass. 282s Preparing to unpack .../48-r-cran-mass_7.3-64-1_armhf.deb ... 282s Unpacking r-cran-mass (7.3-64-1) ... 282s Selecting previously unselected package r-cran-matrix. 282s Preparing to unpack .../49-r-cran-matrix_1.7-3-1_armhf.deb ... 282s Unpacking r-cran-matrix (1.7-3-1) ... 282s Selecting previously unselected package r-cran-mvtnorm. 282s Preparing to unpack .../50-r-cran-mvtnorm_1.3-3-1_armhf.deb ... 282s Unpacking r-cran-mvtnorm (1.3-3-1) ... 282s Selecting previously unselected package r-cran-survival. 282s Preparing to unpack .../51-r-cran-survival_3.8-3-1_armhf.deb ... 282s Unpacking r-cran-survival (3.8-3-1) ... 282s Selecting previously unselected package r-cran-th.data. 282s Preparing to unpack .../52-r-cran-th.data_1.1-3-1_all.deb ... 282s Unpacking r-cran-th.data (1.1-3-1) ... 282s Selecting previously unselected package r-cran-zoo. 282s Preparing to unpack .../53-r-cran-zoo_1.8-13-1_armhf.deb ... 282s Unpacking r-cran-zoo (1.8-13-1) ... 282s Selecting previously unselected package r-cran-sandwich. 282s Preparing to unpack .../54-r-cran-sandwich_3.1-1-1_all.deb ... 282s Unpacking r-cran-sandwich (3.1-1-1) ... 282s Selecting previously unselected package r-cran-multcomp. 282s Preparing to unpack .../55-r-cran-multcomp_1.4-28-1_all.deb ... 282s Unpacking r-cran-multcomp (1.4-28-1) ... 282s Selecting previously unselected package r-cran-psychotools. 283s Preparing to unpack .../56-r-cran-psychotools_0.7-4-1_armhf.deb ... 283s Unpacking r-cran-psychotools (0.7-4-1) ... 283s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 283s Setting up libpixman-1-0:armhf (0.44.0-3) ... 283s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 283s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 283s Setting up libxrender1:armhf (1:0.9.10-1.1build1) ... 283s Setting up libdatrie1:armhf (0.2.13-3build1) ... 283s Setting up libxcb-render0:armhf (1.17.0-2) ... 283s Setting up unzip (6.0-28ubuntu6) ... 283s Setting up x11-common (1:7.7+23ubuntu3) ... 283s Setting up libdeflate0:armhf (1.23-1) ... 283s Setting up libxcb-shm0:armhf (1.17.0-2) ... 283s Setting up libgomp1:armhf (15-20250222-0ubuntu1) ... 283s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 283s Setting up zip (3.0-14ubuntu2) ... 283s Setting up libblas3:armhf (3.12.1-2) ... 283s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 283s Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... 283s Setting up fonts-dejavu-mono (2.37-8) ... 283s Setting up libtcl8.6:armhf (8.6.16+dfsg-1) ... 283s Setting up fonts-dejavu-core (2.37-8) ... 283s Setting up libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 283s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 283s Setting up libwebp7:armhf (1.5.0-0.1) ... 283s Setting up libharfbuzz0b:armhf (10.2.0-1) ... 283s Setting up libthai-data (0.1.29-2build1) ... 283s Setting up libxss1:armhf (1:1.2.3-1build3) ... 283s Setting up libpaper2:armhf (2.2.5-0.3) ... 283s Setting up xdg-utils (1.2.1-2ubuntu1) ... 283s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 283s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 283s Setting up libice6:armhf (2:1.1.1-1) ... 283s Setting up liblapack3:armhf (3.12.1-2) ... 283s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 283s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 284s Setting up libpaper-utils (2.2.5-0.3) ... 284s Setting up libthai0:armhf (0.1.29-2build1) ... 284s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 284s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 284s Setting up libsm6:armhf (2:1.2.4-1) ... 284s Setting up fontconfig (2.15.0-2ubuntu1) ... 286s Regenerating fonts cache... done. 286s Setting up libxft2:armhf (2.3.6-1build1) ... 286s Setting up libtk8.6:armhf (8.6.16-1) ... 286s Setting up libpango-1.0-0:armhf (1.56.2-1) ... 286s Setting up libcairo2:armhf (1.18.2-2) ... 286s Setting up libxt6t64:armhf (1:1.2.1-1.2build1) ... 286s Setting up libpangoft2-1.0-0:armhf (1.56.2-1) ... 286s Setting up libpangocairo-1.0-0:armhf (1.56.2-1) ... 286s Setting up r-base-core (4.4.3-1) ... 286s Creating config file /etc/R/Renviron with new version 286s Setting up r-cran-lattice (0.22-6-1) ... 286s Setting up r-cran-formula (1.2-5-1) ... 286s Setting up r-cran-psychotools (0.7-4-1) ... 286s Setting up r-cran-codetools (0.2-20-1) ... 286s Setting up r-cran-mass (7.3-64-1) ... 286s Setting up r-cran-mvtnorm (1.3-3-1) ... 286s Setting up r-cran-zoo (1.8-13-1) ... 286s Setting up r-cran-matrix (1.7-3-1) ... 286s Setting up r-cran-sandwich (3.1-1-1) ... 286s Setting up r-cran-survival (3.8-3-1) ... 286s Setting up r-cran-th.data (1.1-3-1) ... 286s Setting up r-cran-multcomp (1.4-28-1) ... 286s Processing triggers for libc-bin (2.41-1ubuntu2) ... 286s Processing triggers for man-db (2.13.0-1) ... 287s Processing triggers for install-info (7.1.1-1) ... 295s autopkgtest [16:33:39]: test run-unit-test: [----------------------- 296s BEGIN TEST elementary_symmetric_functions.R 297s 297s R version 4.4.3 (2025-02-28) -- "Trophy Case" 297s Copyright (C) 2025 The R Foundation for Statistical Computing 297s Platform: arm-unknown-linux-gnueabihf (32-bit) 297s 297s R is free software and comes with ABSOLUTELY NO WARRANTY. 297s You are welcome to redistribute it under certain conditions. 297s Type 'license()' or 'licence()' for distribution details. 297s 297s R is a collaborative project with many contributors. 297s Type 'contributors()' for more information and 297s 'citation()' on how to cite R or R packages in publications. 297s 297s Type 'demo()' for some demos, 'help()' for on-line help, or 297s 'help.start()' for an HTML browser interface to help. 297s Type 'q()' to quit R. 297s 297s > ##### several checks for function elementary_symmetric_functions() 297s > ##### 2012/09/07, BAEK 297s > 297s > 297s > ##### preliminaries 297s > library("psychotools") 297s > set.seed(1) 297s > 297s > 297s > ################################################## 297s > ##### dichotomous items (zero and first order derivatives) 297s > ################################################## 297s > di10 <- runif(10, -2.5, 2.5) 297s > di20 <- runif(20, -2.5, 2.5) 297s > elementary_symmetric_functions(di10) 297s $`0` 297s [1] 1.000000e+00 2.055532e+01 1.538662e+02 5.492526e+02 1.018398e+03 297s [6] 1.017086e+03 5.636905e+02 1.734870e+02 2.864725e+01 2.360797e+00 297s [11] 7.610103e-02 297s 297s > elementary_symmetric_functions(di20) 297s $`0` 297s [1] 1.000000e+00 4.717688e+01 9.808555e+02 1.197632e+04 9.635106e+04 297s [6] 5.424130e+05 2.212806e+06 6.680286e+06 1.510344e+07 2.571547e+07 297s [11] 3.299332e+07 3.179465e+07 2.286777e+07 1.216735e+07 4.734880e+06 297s [16] 1.326946e+06 2.618302e+05 3.511236e+04 3.015438e+03 1.481147e+02 297s [21] 3.135644e+00 297s 297s > 297s > ## with 10 items, everything is fine 297s > all.equal(elementary_symmetric_functions(di10, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "C", diff = FALSE)) # R-bin sum vs. C sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(di10, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "C", diff = TRUE)) # R-bin sum vs. C diff 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(di10, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(di10, order = 1, engine = "C", diff = FALSE)) # R-bin diff vs. C sum 297s Warning message: 297s In log(gamma1) : NaNs produced 297s Warning message: 297s In log(gamma1) : NaNs produced 297s Warning message: 297s In log(gamma1) : NaNs produced 297s Warning message: 297s In log(gamma1) : NaNs produced 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(di10, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(di10, order = 1, engine = "C", diff = TRUE)) # R-bin diff vs. C diff 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di10), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "R", diff = FALSE)) # R-poly sum vs. R-bin sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di10), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "R", diff = TRUE)) # R-poly sum vs. R-bin diff 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di10), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "R", diff = FALSE)) # R-poly diff vs. R-bin sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di10), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 1, engine = "R", diff = TRUE)) # R-poly diff vs. R-bin diff 297s [1] TRUE 297s > 297s > ## with 20 items we get (rounding) errors for difference algorithm :) 297s > all.equal(elementary_symmetric_functions(di20, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "C", diff = FALSE)) # R-bin sum vs. C sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(di20, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "C", diff = TRUE)) # R-bin sum vs. C diff 297s [1] "Component “1”: Mean relative difference: 0.0003812731" 297s > all.equal(elementary_symmetric_functions(di20, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(di20, order = 1, engine = "C", diff = FALSE)) # R-bin diff vs. C sum 297s [1] "Component “1”: 'is.NA' value mismatch: 0 in current 1 in target" 297s > all.equal(elementary_symmetric_functions(di20, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(di20, order = 1, engine = "C", diff = TRUE)) # R-bin diff vs. C diff 297s [1] "Component “1”: 'is.NA' value mismatch: 0 in current 1 in target" 297s > all.equal(elementary_symmetric_functions(as.list(di20), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "R", diff = FALSE)) # R-poly sum vs. R-bin sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di20), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "R", diff = TRUE)) # R-poly sum vs. R-bin diff 297s [1] "Component “1”: 'is.NA' value mismatch: 1 in current 0 in target" 297s > all.equal(elementary_symmetric_functions(as.list(di20), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "R", diff = FALSE)) # R-poly diff vs. R-bin sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(as.list(di20), order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(di20, order = 1, engine = "R", diff = TRUE)) # R-poly diff vs. R-bin diff 297s [1] "Component “1”: 'is.NA' value mismatch: 1 in current 0 in target" 297s > 297s > ## second order derivatives (only implemented for R-bin sum/diff) 297s > all.equal(elementary_symmetric_functions(di10, order = 2, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 2, engine = "R", diff = TRUE)) # R-bin sum vs. R-bin diff 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(di20, order = 2, engine = "R", diff = FALSE), elementary_symmetric_functions(di10, order = 2, engine = "R", diff = TRUE)) # R-bin sum vs. R-bin diff 297s [1] "Component “0”: Numeric: lengths (21, 11) differ" 297s [2] "Component “1”: Attributes: < Component “dim”: Mean relative difference: 0.4878049 >" 297s [3] "Component “1”: Numeric: lengths (420, 110) differ" 297s [4] "Component “2”: Attributes: < Component “dim”: Mean relative difference: 0.4918033 >" 297s [5] "Component “2”: Numeric: lengths (8400, 1100) differ" 297s > 297s > 297s > ################################################## 297s > ##### polytomous items (zero and first order derivatives) 297s > ################################################## 297s > pi10 <- unname(split(runif(10, -2.5, 2.5), factor(rep(1:5, each = 2)))) 297s > pi20 <- unname(split(runif(20, -2.5, 2.5), factor(rep(1:10, each = 2)))) 297s > elementary_symmetric_functions(pi10) 297s $`0` 297s [1] 1.000000 2.877547 17.409618 35.128538 93.142712 122.857021 297s [7] 166.381830 135.480720 95.407269 37.673980 13.910708 297s 297s > elementary_symmetric_functions(pi20) 297s $`0` 297s [1] 1.000000e+00 2.644761e+01 2.657538e+02 1.418158e+03 5.094068e+03 297s [6] 1.364425e+04 2.853812e+04 4.831630e+04 6.757728e+04 7.900700e+04 297s [11] 7.790678e+04 6.498572e+04 4.579809e+04 2.714372e+04 1.337284e+04 297s [16] 5.374640e+03 1.709608e+03 4.077618e+02 6.617534e+01 6.150293e+00 297s [21] 2.341581e-01 297s 297s > 297s > ## with 10 items, everything is fine. 297s > all.equal(elementary_symmetric_functions(pi10, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(pi10, order = 1, engine = "C", diff = FALSE)) # R-poly sum vs. C sum 297s [1] "Component “1”: Mean relative difference: 1.440543e+77" 297s > all.equal(elementary_symmetric_functions(pi10, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(pi10, order = 1, engine = "C", diff = TRUE)) # R-poly sum vs. C diff 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(pi10, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(pi10, order = 1, engine = "C", diff = FALSE)) # R-poly diff vs. C sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(pi10, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(pi10, order = 1, engine = "C", diff = TRUE)) # R-poly diff vs. C diff 297s [1] TRUE 297s > 297s > ## with 20 items we get (rounding) errors for difference algorithm :) 297s > all.equal(elementary_symmetric_functions(pi20, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(pi20, order = 1, engine = "C", diff = FALSE)) # R-poly sum vs. C sum 297s [1] TRUE 297s > all.equal(elementary_symmetric_functions(pi20, order = 1, engine = "R", diff = FALSE), elementary_symmetric_functions(pi20, order = 1, engine = "C", diff = TRUE)) # R-poly sum vs. C diff 297s [1] "Component “1”: Mean relative difference: 0.008490914" 297s > all.equal(elementary_symmetric_functions(pi20, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(pi20, order = 1, engine = "C", diff = FALSE)) # R-poly diff vs. C sum 297s [1] "Component “1”: Mean relative difference: 0.004992452" 297s > all.equal(elementary_symmetric_functions(pi20, order = 1, engine = "R", diff = TRUE), elementary_symmetric_functions(pi20, order = 1, engine = "C", diff = TRUE)) # R-poly diff vs. C diff 297s Error in elementary_symmetric_functions(di10, log = FALSE, engine = "C") : 297s log is not TRUE 297s Error in elementary_symmetric_functions(pi10, log = FALSE, engine = "R") : 297s log is not TRUE 297s Error in elementary_symmetric_functions(pi10, log = FALSE, engine = "C") : 297s log is not TRUE 297s [1] "Component “1”: Mean relative difference: 0.003792352" 297s > 297s > 297s > ################################################## 297s > ##### check 'check' 297s > ################################################## 297s > all.equal(elementary_symmetric_functions(di10, order = 1), elementary_symmetric_functions(as.list(di10), order = 1)) # dichotomous items as list / vector 297s [1] TRUE 297s > inherits(try(elementary_symmetric_functions(di10, log = FALSE, engine = "C")), "try-error") # input on log scale for dichotmous items not possible (engine C) 297s Warning message: 297s In elementary_symmetric_functions(di10, order = 2, engine = "C") : 297s Second order ESFs are not available in C, changed to R. 297s Error in elementary_symmetric_functions(pi10, order = 2, engine = "R") : 297s Second order ESFs are not available for polytomous items. 297s Error in elementary_symmetric_functions(pi10, order = 2, engine = "C") : 297s Second order ESFs are not available for polytomous items. 297s [1] TRUE 297s > inherits(try(elementary_symmetric_functions(pi10, log = FALSE, engine = "R")), "try-error") # input on log scale for polytomous items not possible (engine R) 297s [1] TRUE 297s > inherits(try(elementary_symmetric_functions(pi10, log = FALSE, engine = "C")), "try-error") # input on log scale for polytomous items not possible (engine C) 297s [1] TRUE 297s > inherits(try(elementary_symmetric_functions(di10, order = 2, engine = "C")), "try-error") # second order derivatives for dichotmous items not possible (engine C) 297s [1] FALSE 297s > inherits(try(elementary_symmetric_functions(pi10, order = 2, engine = "R")), "try-error") # second order derivatives for polytomous items not possible (engine R) 297s [1] TRUE 297s > inherits(try(elementary_symmetric_functions(pi10, order = 2, engine = "C")), "try-error") # second order derivatives for polytomous items not possible (engine C) 297s [1] TRUE 297s > 297s autopkgtest [16:33:41]: test run-unit-test: -----------------------] 301s autopkgtest [16:33:45]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 301s run-unit-test PASS 305s autopkgtest [16:33:49]: test pkg-r-autopkgtest: preparing testbed 307s Reading package lists... 307s Building dependency tree... 307s Reading state information... 307s Starting pkgProblemResolver with broken count: 0 308s Starting 2 pkgProblemResolver with broken count: 0 308s Done 308s The following NEW packages will be installed: 308s build-essential cpp cpp-14 cpp-14-arm-linux-gnueabihf 308s cpp-arm-linux-gnueabihf dctrl-tools g++ g++-14 g++-14-arm-linux-gnueabihf 308s g++-arm-linux-gnueabihf gcc gcc-14 gcc-14-arm-linux-gnueabihf 308s gcc-arm-linux-gnueabihf gfortran gfortran-14 gfortran-14-arm-linux-gnueabihf 308s gfortran-arm-linux-gnueabihf icu-devtools libasan8 libblas-dev libbz2-dev 308s libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdeflate-dev libgcc-14-dev 308s libgfortran-14-dev libicu-dev libisl23 libjpeg-dev libjpeg-turbo8-dev 308s libjpeg8-dev liblapack-dev liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 308s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev 308s libreadline-dev libstdc++-14-dev libtirpc-dev libubsan1 linux-libc-dev 308s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 309s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. 309s Need to get 78.1 MB of archives. 309s After this operation, 243 MB of additional disk space will be used. 309s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 309s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 311s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 311s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 311s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 313s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 313s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 313s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 324s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 324s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 324s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 324s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 324s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 327s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 329s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 330s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 351s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 351s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 351s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 351s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 354s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 365s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 365s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 365s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 365s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 365s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf dctrl-tools armhf 2.24-3build3 [94.7 kB] 365s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran-14-dev armhf 14.2.0-17ubuntu3 [370 kB] 366s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9763 kB] 377s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14 armhf 14.2.0-17ubuntu3 [13.6 kB] 377s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1026 B] 377s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran armhf 4:14.2.0-1ubuntu1 [1166 B] 377s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf icu-devtools armhf 76.1-1ubuntu2 [206 kB] 377s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libblas-dev armhf 3.12.1-2 [141 kB] 377s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libbz2-dev armhf 1.0.8-6 [30.9 kB] 378s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate-dev armhf 1.23-1 [45.0 kB] 378s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libicu-dev armhf 76.1-1ubuntu2 [12.0 MB] 392s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8-dev armhf 2.1.5-3ubuntu2 [265 kB] 392s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] 392s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] 392s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack-dev armhf 3.12.1-2 [2207 kB] 395s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libncurses-dev armhf 6.5+20250216-2 [345 kB] 395s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-16-0 armhf 10.45-1 [207 kB] 395s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-32-0 armhf 10.45-1 [197 kB] 395s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-posix3 armhf 10.45-1 [6300 B] 395s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-dev armhf 10.45-1 [752 kB] 396s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libpkgconf3 armhf 1.8.1-4 [26.6 kB] 396s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 397s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf libpng-dev armhf 1.6.47-1 [251 kB] 398s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libreadline-dev armhf 8.2-6 [153 kB] 398s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf liblzma-dev armhf 5.6.4-1 [166 kB] 398s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf-bin armhf 1.8.1-4 [21.2 kB] 398s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf armhf 1.8.1-4 [16.8 kB] 398s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libtirpc-dev armhf 1.3.4+ds-1.3 [184 kB] 398s Get:54 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-dev all 4.4.3-1 [4176 B] 398s Get:55 http://ftpmaster.internal/ubuntu plucky/universe armhf pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 399s Fetched 78.1 MB in 1min 30s (868 kB/s) 399s Selecting previously unselected package libc-dev-bin. 399s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67649 files and directories currently installed.) 399s Preparing to unpack .../00-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 399s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 399s Selecting previously unselected package linux-libc-dev:armhf. 399s Preparing to unpack .../01-linux-libc-dev_6.14.0-10.10_armhf.deb ... 399s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 399s Selecting previously unselected package libcrypt-dev:armhf. 399s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 399s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 399s Selecting previously unselected package rpcsvc-proto. 399s Preparing to unpack .../03-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 399s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 399s Selecting previously unselected package libc6-dev:armhf. 399s Preparing to unpack .../04-libc6-dev_2.41-1ubuntu2_armhf.deb ... 399s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 399s Selecting previously unselected package libisl23:armhf. 399s Preparing to unpack .../05-libisl23_0.27-1_armhf.deb ... 399s Unpacking libisl23:armhf (0.27-1) ... 400s Selecting previously unselected package libmpc3:armhf. 400s Preparing to unpack .../06-libmpc3_1.3.1-1build2_armhf.deb ... 400s Unpacking libmpc3:armhf (1.3.1-1build2) ... 400s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 400s Preparing to unpack .../07-cpp-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 400s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 400s Selecting previously unselected package cpp-14. 400s Preparing to unpack .../08-cpp-14_14.2.0-17ubuntu3_armhf.deb ... 400s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 400s Selecting previously unselected package cpp-arm-linux-gnueabihf. 400s Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 400s Unpacking cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 400s Selecting previously unselected package cpp. 400s Preparing to unpack .../10-cpp_4%3a14.2.0-1ubuntu1_armhf.deb ... 400s Unpacking cpp (4:14.2.0-1ubuntu1) ... 400s Selecting previously unselected package libcc1-0:armhf. 400s Preparing to unpack .../11-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 400s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 400s Selecting previously unselected package libasan8:armhf. 400s Preparing to unpack .../12-libasan8_15-20250222-0ubuntu1_armhf.deb ... 400s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 400s Selecting previously unselected package libubsan1:armhf. 400s Preparing to unpack .../13-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 400s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 400s Selecting previously unselected package libgcc-14-dev:armhf. 400s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 400s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 400s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 400s Preparing to unpack .../15-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 400s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package gcc-14. 401s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package gcc-arm-linux-gnueabihf. 401s Preparing to unpack .../17-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 401s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 401s Selecting previously unselected package gcc. 401s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 401s Unpacking gcc (4:14.2.0-1ubuntu1) ... 401s Selecting previously unselected package libstdc++-14-dev:armhf. 401s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 401s Preparing to unpack .../20-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package g++-14. 401s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking g++-14 (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package g++-arm-linux-gnueabihf. 401s Preparing to unpack .../22-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 401s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 401s Selecting previously unselected package g++. 401s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 401s Unpacking g++ (4:14.2.0-1ubuntu1) ... 401s Selecting previously unselected package build-essential. 401s Preparing to unpack .../24-build-essential_12.10ubuntu1_armhf.deb ... 401s Unpacking build-essential (12.10ubuntu1) ... 401s Selecting previously unselected package dctrl-tools. 401s Preparing to unpack .../25-dctrl-tools_2.24-3build3_armhf.deb ... 401s Unpacking dctrl-tools (2.24-3build3) ... 401s Selecting previously unselected package libgfortran-14-dev:armhf. 401s Preparing to unpack .../26-libgfortran-14-dev_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 401s Selecting previously unselected package gfortran-14-arm-linux-gnueabihf. 401s Preparing to unpack .../27-gfortran-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 401s Unpacking gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 402s Selecting previously unselected package gfortran-14. 402s Preparing to unpack .../28-gfortran-14_14.2.0-17ubuntu3_armhf.deb ... 402s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 402s Selecting previously unselected package gfortran-arm-linux-gnueabihf. 402s Preparing to unpack .../29-gfortran-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 402s Unpacking gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 402s Selecting previously unselected package gfortran. 402s Preparing to unpack .../30-gfortran_4%3a14.2.0-1ubuntu1_armhf.deb ... 402s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 402s Selecting previously unselected package icu-devtools. 402s Preparing to unpack .../31-icu-devtools_76.1-1ubuntu2_armhf.deb ... 402s Unpacking icu-devtools (76.1-1ubuntu2) ... 402s Selecting previously unselected package libblas-dev:armhf. 402s Preparing to unpack .../32-libblas-dev_3.12.1-2_armhf.deb ... 402s Unpacking libblas-dev:armhf (3.12.1-2) ... 402s Selecting previously unselected package libbz2-dev:armhf. 402s Preparing to unpack .../33-libbz2-dev_1.0.8-6_armhf.deb ... 402s Unpacking libbz2-dev:armhf (1.0.8-6) ... 402s Selecting previously unselected package libdeflate-dev:armhf. 402s Preparing to unpack .../34-libdeflate-dev_1.23-1_armhf.deb ... 402s Unpacking libdeflate-dev:armhf (1.23-1) ... 402s Selecting previously unselected package libicu-dev:armhf. 402s Preparing to unpack .../35-libicu-dev_76.1-1ubuntu2_armhf.deb ... 402s Unpacking libicu-dev:armhf (76.1-1ubuntu2) ... 402s Selecting previously unselected package libjpeg-turbo8-dev:armhf. 402s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_armhf.deb ... 402s Unpacking libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 402s Selecting previously unselected package libjpeg8-dev:armhf. 402s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_armhf.deb ... 402s Unpacking libjpeg8-dev:armhf (8c-2ubuntu11) ... 402s Selecting previously unselected package libjpeg-dev:armhf. 402s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_armhf.deb ... 402s Unpacking libjpeg-dev:armhf (8c-2ubuntu11) ... 402s Selecting previously unselected package liblapack-dev:armhf. 402s Preparing to unpack .../39-liblapack-dev_3.12.1-2_armhf.deb ... 402s Unpacking liblapack-dev:armhf (3.12.1-2) ... 402s Selecting previously unselected package libncurses-dev:armhf. 402s Preparing to unpack .../40-libncurses-dev_6.5+20250216-2_armhf.deb ... 402s Unpacking libncurses-dev:armhf (6.5+20250216-2) ... 402s Selecting previously unselected package libpcre2-16-0:armhf. 403s Preparing to unpack .../41-libpcre2-16-0_10.45-1_armhf.deb ... 403s Unpacking libpcre2-16-0:armhf (10.45-1) ... 403s Selecting previously unselected package libpcre2-32-0:armhf. 403s Preparing to unpack .../42-libpcre2-32-0_10.45-1_armhf.deb ... 403s Unpacking libpcre2-32-0:armhf (10.45-1) ... 403s Selecting previously unselected package libpcre2-posix3:armhf. 403s Preparing to unpack .../43-libpcre2-posix3_10.45-1_armhf.deb ... 403s Unpacking libpcre2-posix3:armhf (10.45-1) ... 403s Selecting previously unselected package libpcre2-dev:armhf. 403s Preparing to unpack .../44-libpcre2-dev_10.45-1_armhf.deb ... 403s Unpacking libpcre2-dev:armhf (10.45-1) ... 403s Selecting previously unselected package libpkgconf3:armhf. 403s Preparing to unpack .../45-libpkgconf3_1.8.1-4_armhf.deb ... 403s Unpacking libpkgconf3:armhf (1.8.1-4) ... 403s Selecting previously unselected package zlib1g-dev:armhf. 403s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 403s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 403s Selecting previously unselected package libpng-dev:armhf. 403s Preparing to unpack .../47-libpng-dev_1.6.47-1_armhf.deb ... 403s Unpacking libpng-dev:armhf (1.6.47-1) ... 403s Selecting previously unselected package libreadline-dev:armhf. 403s Preparing to unpack .../48-libreadline-dev_8.2-6_armhf.deb ... 403s Unpacking libreadline-dev:armhf (8.2-6) ... 403s Selecting previously unselected package liblzma-dev:armhf. 403s Preparing to unpack .../49-liblzma-dev_5.6.4-1_armhf.deb ... 403s Unpacking liblzma-dev:armhf (5.6.4-1) ... 403s Selecting previously unselected package pkgconf-bin. 403s Preparing to unpack .../50-pkgconf-bin_1.8.1-4_armhf.deb ... 403s Unpacking pkgconf-bin (1.8.1-4) ... 403s Selecting previously unselected package pkgconf:armhf. 403s Preparing to unpack .../51-pkgconf_1.8.1-4_armhf.deb ... 403s Unpacking pkgconf:armhf (1.8.1-4) ... 403s Selecting previously unselected package libtirpc-dev:armhf. 403s Preparing to unpack .../52-libtirpc-dev_1.3.4+ds-1.3_armhf.deb ... 403s Unpacking libtirpc-dev:armhf (1.3.4+ds-1.3) ... 403s Selecting previously unselected package r-base-dev. 403s Preparing to unpack .../53-r-base-dev_4.4.3-1_all.deb ... 403s Unpacking r-base-dev (4.4.3-1) ... 403s Selecting previously unselected package pkg-r-autopkgtest. 403s Preparing to unpack .../54-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 403s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 403s Setting up linux-libc-dev:armhf (6.14.0-10.10) ... 403s Setting up libpcre2-16-0:armhf (10.45-1) ... 403s Setting up libpcre2-32-0:armhf (10.45-1) ... 403s Setting up libtirpc-dev:armhf (1.3.4+ds-1.3) ... 403s Setting up libpkgconf3:armhf (1.8.1-4) ... 403s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 403s Setting up libmpc3:armhf (1.3.1-1build2) ... 403s Setting up icu-devtools (76.1-1ubuntu2) ... 403s Setting up pkgconf-bin (1.8.1-4) ... 403s Setting up liblzma-dev:armhf (5.6.4-1) ... 403s Setting up libubsan1:armhf (15-20250222-0ubuntu1) ... 403s Setting up libpcre2-posix3:armhf (10.45-1) ... 403s Setting up libcrypt-dev:armhf (1:4.4.38-1) ... 403s Setting up libasan8:armhf (15-20250222-0ubuntu1) ... 403s Setting up libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 403s Setting up libisl23:armhf (0.27-1) ... 403s Setting up libc-dev-bin (2.41-1ubuntu2) ... 403s Setting up libdeflate-dev:armhf (1.23-1) ... 403s Setting up libcc1-0:armhf (15-20250222-0ubuntu1) ... 403s Setting up libblas-dev:armhf (3.12.1-2) ... 403s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode 403s Setting up dctrl-tools (2.24-3build3) ... 403s Setting up cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 403s Setting up libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 403s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 403s Setting up pkgconf:armhf (1.8.1-4) ... 403s Setting up liblapack-dev:armhf (3.12.1-2) ... 403s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode 403s Setting up cpp-14 (14.2.0-17ubuntu3) ... 403s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 403s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 403s Setting up libicu-dev:armhf (76.1-1ubuntu2) ... 403s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 403s Setting up gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 403s Setting up libbz2-dev:armhf (1.0.8-6) ... 403s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 403s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 403s Setting up libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 403s Setting up libncurses-dev:armhf (6.5+20250216-2) ... 403s Setting up libpcre2-dev:armhf (10.45-1) ... 403s Setting up libreadline-dev:armhf (8.2-6) ... 403s Setting up gcc-14 (14.2.0-17ubuntu3) ... 403s Setting up gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 403s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 403s Setting up cpp (4:14.2.0-1ubuntu1) ... 403s Setting up g++-14 (14.2.0-17ubuntu3) ... 403s Setting up libjpeg8-dev:armhf (8c-2ubuntu11) ... 403s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 403s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 403s Setting up libpng-dev:armhf (1.6.47-1) ... 403s Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... 403s Setting up gcc (4:14.2.0-1ubuntu1) ... 403s Setting up g++ (4:14.2.0-1ubuntu1) ... 403s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 403s Setting up build-essential (12.10ubuntu1) ... 403s Setting up gfortran (4:14.2.0-1ubuntu1) ... 403s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 403s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 403s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 403s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 403s Setting up r-base-dev (4.4.3-1) ... 403s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 403s Processing triggers for libc-bin (2.41-1ubuntu2) ... 403s Processing triggers for man-db (2.13.0-1) ... 404s Processing triggers for install-info (7.1.1-1) ... 418s autopkgtest [16:35:42]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 418s autopkgtest [16:35:42]: test pkg-r-autopkgtest: [----------------------- 420s Test: Try to load the R library psychotools 420s 420s R version 4.4.3 (2025-02-28) -- "Trophy Case" 420s Copyright (C) 2025 The R Foundation for Statistical Computing 420s Platform: arm-unknown-linux-gnueabihf (32-bit) 420s 420s R is free software and comes with ABSOLUTELY NO WARRANTY. 420s You are welcome to redistribute it under certain conditions. 420s Type 'license()' or 'licence()' for distribution details. 420s 420s R is a collaborative project with many contributors. 420s Type 'contributors()' for more information and 420s 'citation()' on how to cite R or R packages in publications. 420s 420s Type 'demo()' for some demos, 'help()' for on-line help, or 420s 'help.start()' for an HTML browser interface to help. 420s Type 'q()' to quit R. 420s 420s > library('psychotools') 420s > 420s > 420s Other tests are currently unsupported! 420s They will be progressively added. 421s autopkgtest [16:35:45]: test pkg-r-autopkgtest: -----------------------] 425s pkg-r-autopkgtest PASS 425s autopkgtest [16:35:49]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 428s autopkgtest [16:35:52]: @@@@@@@@@@@@@@@@@@@@ summary 428s run-unit-test PASS 428s pkg-r-autopkgtest PASS