0s autopkgtest [16:01:03]: starting date and time: 2025-03-15 16:01:03+0000 0s autopkgtest [16:01:03]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:01:03]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.sz83sj30/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-circular --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.201 lxd-armhf-10.145.243.201:autopkgtest/ubuntu/plucky/armhf 21s autopkgtest [16:01:24]: testbed dpkg architecture: armhf 23s autopkgtest [16:01:26]: testbed apt version: 2.9.33 27s autopkgtest [16:01:30]: @@@@@@@@@@@@@@@@@@@@ test bed setup 29s autopkgtest [16:01:32]: testbed release detected to be: None 37s autopkgtest [16:01:40]: updating testbed package index (apt update) 39s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 39s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 40s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 40s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 40s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 40s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 40s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 41s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 41s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 41s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 41s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 41s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 41s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 41s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 41s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 43s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 77s Get:17 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 77s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 80s Get:19 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 104s Get:20 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 106s Fetched 40.7 MB in 1min 7s (606 kB/s) 108s Reading package lists... 113s autopkgtest [16:02:56]: upgrading testbed (apt dist-upgrade and autopurge) 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 116s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 116s Starting 2 pkgProblemResolver with broken count: 0 116s Done 117s Entering ResolveByKeep 117s 117s Calculating upgrade... 118s The following packages will be upgraded: 118s libc-bin libc6 locales pinentry-curses sos 118s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s Need to get 8128 kB of archives. 118s After this operation, 0 B of additional disk space will be used. 118s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 122s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 122s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 127s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 127s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 128s Preconfiguring packages ... 128s Fetched 8128 kB in 10s (852 kB/s) 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 128s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 128s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 128s Setting up libc6:armhf (2.41-1ubuntu2) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 129s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 129s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 129s Setting up libc-bin (2.41-1ubuntu2) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 129s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 129s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 129s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 129s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 129s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 130s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 130s Setting up sos (4.9.0-5) ... 131s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 131s Setting up locales (2.41-1ubuntu2) ... 132s Generating locales (this might take a while)... 134s en_US.UTF-8... done 134s Generation complete. 134s Processing triggers for systemd (257.3-1ubuntu3) ... 134s Processing triggers for man-db (2.13.0-1) ... 137s Reading package lists... 138s Building dependency tree... 138s Reading state information... 139s Starting pkgProblemResolver with broken count: 0 139s Starting 2 pkgProblemResolver with broken count: 0 139s Done 140s Solving dependencies... 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 142s autopkgtest [16:03:25]: rebooting testbed after setup commands that affected boot 182s autopkgtest [16:04:05]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 206s autopkgtest [16:04:29]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-circular 216s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-circular 0.5-1-1 (dsc) [2110 B] 216s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-circular 0.5-1-1 (tar) [184 kB] 216s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-circular 0.5-1-1 (diff) [3396 B] 216s gpgv: Signature made Wed Jan 29 00:29:05 2025 UTC 216s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 216s gpgv: issuer "plessy@debian.org" 216s gpgv: Can't check signature: No public key 216s dpkg-source: warning: cannot verify inline signature for ./r-cran-circular_0.5-1-1.dsc: no acceptable signature found 216s autopkgtest [16:04:39]: testing package r-cran-circular version 0.5-1-1 218s autopkgtest [16:04:41]: build not needed 222s autopkgtest [16:04:45]: test run-unit-test: preparing testbed 224s Reading package lists... 224s Building dependency tree... 224s Reading state information... 224s Starting pkgProblemResolver with broken count: 0 224s Starting 2 pkgProblemResolver with broken count: 0 224s Done 225s The following NEW packages will be installed: 225s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 225s libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5 225s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 225s libjpeg8 liblapack3 liblerc4 libpango-1.0-0 libpangocairo-1.0-0 225s libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 225s libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 225s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-boot 225s r-cran-circular r-cran-mvtnorm unzip x11-common xdg-utils zip 226s 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. 226s Need to get 40.0 MB of archives. 226s After this operation, 73.6 MB of additional disk space will be used. 226s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 226s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 227s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 229s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 229s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 229s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 229s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 230s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 230s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 230s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 230s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 230s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 231s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 231s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 231s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 232s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 232s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 232s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 233s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 233s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 233s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 233s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 233s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 237s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 237s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libthai-data all 0.1.29-2build1 [158 kB] 237s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 237s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libpango-1.0-0 armhf 1.56.2-1 [216 kB] 238s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libpangoft2-1.0-0 armhf 1.56.2-1 [43.6 kB] 238s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf libpangocairo-1.0-0 armhf 1.56.2-1 [25.1 kB] 238s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper2 armhf 2.2.5-0.3 [16.3 kB] 238s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper-utils armhf 2.2.5-0.3 [14.2 kB] 238s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 238s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 238s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 240s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 240s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 240s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 241s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 241s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 241s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 242s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 242s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf zip armhf 3.0-14ubuntu2 [164 kB] 243s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf unzip armhf 6.0-28ubuntu6 [167 kB] 243s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 243s Get:45 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-core armhf 4.4.3-1 [28.2 MB] 295s Get:46 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-boot all 1.3-31-1 [635 kB] 296s Get:47 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mvtnorm armhf 1.3-3-1 [915 kB] 298s Get:48 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-circular armhf 0.5-1-1 [825 kB] 300s Preconfiguring packages ... 300s Fetched 40.0 MB in 1min 14s (539 kB/s) 300s Selecting previously unselected package libfreetype6:armhf. 300s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 300s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 300s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 300s Selecting previously unselected package fonts-dejavu-mono. 300s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 300s Unpacking fonts-dejavu-mono (2.37-8) ... 300s Selecting previously unselected package fonts-dejavu-core. 300s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 300s Unpacking fonts-dejavu-core (2.37-8) ... 300s Selecting previously unselected package fontconfig-config. 300s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 301s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 301s Selecting previously unselected package libfontconfig1:armhf. 301s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 301s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 301s Selecting previously unselected package fontconfig. 301s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 301s Unpacking fontconfig (2.15.0-2ubuntu1) ... 301s Selecting previously unselected package libblas3:armhf. 301s Preparing to unpack .../06-libblas3_3.12.1-2_armhf.deb ... 301s Unpacking libblas3:armhf (3.12.1-2) ... 301s Selecting previously unselected package libpixman-1-0:armhf. 301s Preparing to unpack .../07-libpixman-1-0_0.44.0-3_armhf.deb ... 301s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 301s Selecting previously unselected package libxcb-render0:armhf. 301s Preparing to unpack .../08-libxcb-render0_1.17.0-2_armhf.deb ... 301s Unpacking libxcb-render0:armhf (1.17.0-2) ... 301s Selecting previously unselected package libxcb-shm0:armhf. 301s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_armhf.deb ... 301s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 301s Selecting previously unselected package libxrender1:armhf. 301s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 301s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 301s Selecting previously unselected package libcairo2:armhf. 301s Preparing to unpack .../11-libcairo2_1.18.2-2_armhf.deb ... 301s Unpacking libcairo2:armhf (1.18.2-2) ... 301s Selecting previously unselected package libdatrie1:armhf. 301s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_armhf.deb ... 301s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 301s Selecting previously unselected package libdeflate0:armhf. 301s Preparing to unpack .../13-libdeflate0_1.23-1_armhf.deb ... 301s Unpacking libdeflate0:armhf (1.23-1) ... 301s Selecting previously unselected package libgfortran5:armhf. 301s Preparing to unpack .../14-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 301s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 301s Selecting previously unselected package libgomp1:armhf. 301s Preparing to unpack .../15-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 301s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 301s Selecting previously unselected package libgraphite2-3:armhf. 301s Preparing to unpack .../16-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 301s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 302s Selecting previously unselected package libharfbuzz0b:armhf. 302s Preparing to unpack .../17-libharfbuzz0b_10.2.0-1_armhf.deb ... 302s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 302s Selecting previously unselected package x11-common. 302s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu3_all.deb ... 302s Unpacking x11-common (1:7.7+23ubuntu3) ... 302s Selecting previously unselected package libice6:armhf. 302s Preparing to unpack .../19-libice6_2%3a1.1.1-1_armhf.deb ... 302s Unpacking libice6:armhf (2:1.1.1-1) ... 302s Selecting previously unselected package libjpeg-turbo8:armhf. 302s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 302s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 302s Selecting previously unselected package libjpeg8:armhf. 302s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_armhf.deb ... 302s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 302s Selecting previously unselected package liblapack3:armhf. 302s Preparing to unpack .../22-liblapack3_3.12.1-2_armhf.deb ... 302s Unpacking liblapack3:armhf (3.12.1-2) ... 302s Selecting previously unselected package liblerc4:armhf. 302s Preparing to unpack .../23-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 302s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 302s Selecting previously unselected package libthai-data. 302s Preparing to unpack .../24-libthai-data_0.1.29-2build1_all.deb ... 302s Unpacking libthai-data (0.1.29-2build1) ... 302s Selecting previously unselected package libthai0:armhf. 302s Preparing to unpack .../25-libthai0_0.1.29-2build1_armhf.deb ... 302s Unpacking libthai0:armhf (0.1.29-2build1) ... 302s Selecting previously unselected package libpango-1.0-0:armhf. 302s Preparing to unpack .../26-libpango-1.0-0_1.56.2-1_armhf.deb ... 302s Unpacking libpango-1.0-0:armhf (1.56.2-1) ... 302s Selecting previously unselected package libpangoft2-1.0-0:armhf. 302s Preparing to unpack .../27-libpangoft2-1.0-0_1.56.2-1_armhf.deb ... 302s Unpacking libpangoft2-1.0-0:armhf (1.56.2-1) ... 302s Selecting previously unselected package libpangocairo-1.0-0:armhf. 302s Preparing to unpack .../28-libpangocairo-1.0-0_1.56.2-1_armhf.deb ... 302s Unpacking libpangocairo-1.0-0:armhf (1.56.2-1) ... 302s Selecting previously unselected package libpaper2:armhf. 302s Preparing to unpack .../29-libpaper2_2.2.5-0.3_armhf.deb ... 302s Unpacking libpaper2:armhf (2.2.5-0.3) ... 302s Selecting previously unselected package libpaper-utils. 302s Preparing to unpack .../30-libpaper-utils_2.2.5-0.3_armhf.deb ... 302s Unpacking libpaper-utils (2.2.5-0.3) ... 302s Selecting previously unselected package libsharpyuv0:armhf. 302s Preparing to unpack .../31-libsharpyuv0_1.5.0-0.1_armhf.deb ... 302s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 302s Selecting previously unselected package libsm6:armhf. 302s Preparing to unpack .../32-libsm6_2%3a1.2.4-1_armhf.deb ... 302s Unpacking libsm6:armhf (2:1.2.4-1) ... 302s Selecting previously unselected package libtcl8.6:armhf. 302s Preparing to unpack .../33-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 302s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 302s Selecting previously unselected package libjbig0:armhf. 302s Preparing to unpack .../34-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 302s 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libpangoft2-1.0-0:armhf (1.56.2-1) ... 307s Setting up libpangocairo-1.0-0:armhf (1.56.2-1) ... 307s Setting up r-base-core (4.4.3-1) ... 307s Creating config file /etc/R/Renviron with new version 307s Setting up r-cran-boot (1.3-31-1) ... 307s Setting up r-cran-mvtnorm (1.3-3-1) ... 307s Setting up r-cran-circular (0.5-1-1) ... 307s Processing triggers for libc-bin (2.41-1ubuntu2) ... 307s Processing triggers for man-db (2.13.0-1) ... 308s Processing triggers for install-info (7.1.1-1) ... 316s autopkgtest [16:06:19]: test run-unit-test: [----------------------- 318s BEGIN TEST test-median.R 318s 318s R version 4.4.3 (2025-02-28) -- "Trophy Case" 318s Copyright (C) 2025 The R Foundation for Statistical Computing 318s Platform: arm-unknown-linux-gnueabihf (32-bit) 318s 318s R is free software and comes with ABSOLUTELY NO WARRANTY. 318s You are welcome to redistribute it under certain conditions. 318s Type 'license()' or 'licence()' for distribution details. 318s 318s R is a collaborative project with many contributors. 318s Type 'contributors()' for more information and 318s 'citation()' on how to cite R or R packages in publications. 318s 318s Type 'demo()' for some demos, 'help()' for on-line help, or 318s 'help.start()' for an HTML browser interface to help. 318s Type 'q()' to quit R. 318s 318s > suppressMessages(library("circular")) 318s > # ?median.circular 318s > 318s > 318s > med <- median.circular(circular(c(0, pi/2, pi, 3/2*pi))) 318s > 318s > ## expect: 318s > ## median is equal to NA 318s > stopifnot( 318s + is.na(med) 318s + ) 318s > 318s > ## expect: 318s > ## all the points are minimizers of the function 318s > stopifnot( 318s + all.equal(attr(med, "medians"), c(0, pi/2, pi, 3/2*pi), tol = 2e-7) 318s + ) 318s > 318s > 318s BEGIN TEST test-walraff.test.R 318s 318s R version 4.4.3 (2025-02-28) -- "Trophy Case" 318s Copyright (C) 2025 The R Foundation for Statistical Computing 318s Platform: arm-unknown-linux-gnueabihf (32-bit) 318s 318s R is free software and comes with ABSOLUTELY NO WARRANTY. 318s You are welcome to redistribute it under certain conditions. 318s Type 'license()' or 'licence()' for distribution details. 318s 318s R is a collaborative project with many contributors. 318s Type 'contributors()' for more information and 318s 'citation()' on how to cite R or R packages in publications. 318s 318s Type 'demo()' for some demos, 'help()' for on-line help, or 318s 'help.start()' for an HTML browser interface to help. 318s Type 'q()' to quit R. 318s 318s > # Test data from: 318s > # Batschelet, E (1981). Circular Statistics in Biology. 318s > # Examples 6.10.1 and 6.10.2, p 126 318s > # 318s > 318s > suppressMessages(library("circular")) 318s > # ?wallraff.test 318s > 318s > angles <- circular(c(70, 80, 80, 85, 85, 90, 95, 95, 5, 5, 15, 55, 55, 65, 105, 120, 340), units="degrees", template="geographics") 318s > group <- factor(c(rep("control", 8), rep("experimental", 9))) 318s > 318s > homeDir <- 40 318s > 318s > # expect: 318s > # W = 2 (in wilcox.test) and p < 0.01 for the dispersion test 318s > # W = 26 (in wilcox.test) and p > 0.05 for the homing test 318s > 318s > xn <- angles 318s > wallraff.test(xn, group) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: xn by group 318s Kruskal-Wallis chi-squared = 10.77, df = 1, p-value = 0.001032 318s 318s > 318s > wallraff.test(xn, group, ref=homeDir) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: xn by group 318s Kruskal-Wallis chi-squared = 0.93278, df = 1, p-value = 0.3341 318s 318s > wallraff.test(xn, as.factor(group), ref=homeDir) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: xn by as.factor(group) 318s Kruskal-Wallis chi-squared = 0.93278, df = 1, p-value = 0.3341 318s 318s > 318s > 318s > xl <- split(xn, group) 318s > wallraff.test(xl, ref=homeDir) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: control and experimental 318s Kruskal-Wallis chi-squared = 0.93278, df = 1, p-value = 0.3341 318s 318s > wallraff.test(xl) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: control and experimental 318s Kruskal-Wallis chi-squared = 10.77, df = 1, p-value = 0.001032 318s 318s > 318s > xl <- split(xn, group) 318s > names(xl) <- NULL 318s > wallraff.test(xl) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: 1 and 2 318s Kruskal-Wallis chi-squared = 10.77, df = 1, p-value = 0.001032 318s 318s > 318s > xd <- data.frame(group=group, angles=angles) 318s > wallraff.test(angles ~ group, xd) 318s 318s Wallraff rank sum test of angular distance 318s 318s data: angles by group 318s Kruskal-Wallis chi-squared = 10.77, df = 1, p-value = 0.001032 318s 318s > 318s BEGIN TEST test-watson.williams.test.R 318s 318s R version 4.4.3 (2025-02-28) -- "Trophy Case" 318s Copyright (C) 2025 The R Foundation for Statistical Computing 318s Platform: arm-unknown-linux-gnueabihf (32-bit) 318s 318s R is free software and comes with ABSOLUTELY NO WARRANTY. 318s You are welcome to redistribute it under certain conditions. 318s Type 'license()' or 'licence()' for distribution details. 318s 318s R is a collaborative project with many contributors. 318s Type 'contributors()' for more information and 318s 'citation()' on how to cite R or R packages in publications. 318s 318s Type 'demo()' for some demos, 'help()' for on-line help, or 318s 'help.start()' for an HTML browser interface to help. 318s Type 'q()' to quit R. 318s 318s > # Test data from: 318s > # Circular statistics in biology, Batschelet, E (1981) 318s > # §6.2, p99 318s > # 318s > 318s > suppressMessages(library("circular")) 319s > # ?watson.williams.test 319s > 319s > angles <- circular( c(rep(c(-20, -10, 0), c(1,7,2)), rep(c(-10, 0, 10, 20), c(3,3,3,1))), units="degrees", template="geographics") 319s > group <- factor(rep(c("exp", "control"), each=10)) 319s > 319s > # expect this: 319s > # F = 8.7329, df1 = 1, df2 = 18, p-value = 0.003108 319s > # mean of control mean of exp 319s > # 1.988969 -9.000615 319s > 319s > # Test interfaces 319s > xn <- angles 319s > watson.williams.test(xn, group) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: xn by group 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > 319s > xl <- split(xn, group) 319s > watson.williams.test(xl) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: control and exp 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > 319s > xl <- split(xn, group) 319s > names(xl) <- NULL 319s > watson.williams.test(xl) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: 1 and 2 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of 1 mean of 2 319s 1.988969 -9.000615 319s 319s > 319s > xd <- data.frame(group=group, angles=angles) 319s > watson.williams.test(angles ~ group, xd) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: angles by group 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > 319s > # Test the influence of ordering the groups 319s > id <- c(9, 8, 7, 4, 6, 5, 12, 18, 10, 17, 1, 19, 3, 20, 2, 16, 15, 14, 13, 11) 319s > angles <- angles[id] 319s > group <- group[id] 319s > 319s > xn <- angles 319s > watson.williams.test(xn, group) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: xn by group 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > xl <- split(xn, group) 319s > watson.williams.test(xl) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: control and exp 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > xd <- data.frame(group=group, angles=angles) 319s > watson.williams.test(angles ~ group, xd) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: angles by group 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of control mean of exp 319s 1.988969 -9.000615 319s 319s > 319s > # Test NAs 319s > angles[length(angles)+1] <- NA 319s > levels(group) <- c("exp", "control", "bar") 319s > group[length(group)+1] <- "bar" 319s > xn <- angles 319s > watson.williams.test(xn, group) 319s 319s Watson-Williams test for homogeneity of means 319s 319s data: xn by group 319s F = 8.7329, df1 = 1, df2 = 18, p-value = 0.008472 319s sample estimates: 319s Circular Data: 319s Type = angles 319s Units = degrees 319s Template = geographics 319s Modulo = asis 319s Zero = 1.570796 319s Rotation = clock 319s mean of exp mean of control 319s 1.988969 -9.000615 319s 319s > 319s autopkgtest [16:06:22]: test run-unit-test: -----------------------] 323s run-unit-test PASS 323s autopkgtest [16:06:26]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 327s autopkgtest [16:06:30]: test pkg-r-autopkgtest: preparing testbed 328s Reading package lists... 329s Building dependency tree... 329s Reading state information... 329s Starting pkgProblemResolver with broken count: 0 329s Starting 2 pkgProblemResolver with broken count: 0 329s Done 330s The following NEW packages will be installed: 330s build-essential cpp cpp-14 cpp-14-arm-linux-gnueabihf 330s cpp-arm-linux-gnueabihf dctrl-tools g++ g++-14 g++-14-arm-linux-gnueabihf 330s g++-arm-linux-gnueabihf gcc gcc-14 gcc-14-arm-linux-gnueabihf 330s gcc-arm-linux-gnueabihf gfortran gfortran-14 gfortran-14-arm-linux-gnueabihf 330s gfortran-arm-linux-gnueabihf icu-devtools libasan8 libblas-dev libbz2-dev 330s libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdeflate-dev libgcc-14-dev 330s libgfortran-14-dev libicu-dev libisl23 libjpeg-dev libjpeg-turbo8-dev 330s libjpeg8-dev liblapack-dev liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 330s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev 330s libreadline-dev libstdc++-14-dev libtirpc-dev libubsan1 linux-libc-dev 330s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev rpcsvc-proto zlib1g-dev 330s 0 upgraded, 55 newly installed, 0 to remove and 0 not upgraded. 330s Need to get 78.1 MB of archives. 330s After this operation, 243 MB of additional disk space will be used. 330s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 330s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 333s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 333s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 333s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 335s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 336s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 336s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 348s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 348s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 348s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 348s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 348s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 351s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 353s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 354s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 375s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 376s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 376s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 376s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 379s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 392s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 392s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 392s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 392s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 392s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf dctrl-tools armhf 2.24-3build3 [94.7 kB] 392s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran-14-dev armhf 14.2.0-17ubuntu3 [370 kB] 392s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9763 kB] 404s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-14 armhf 14.2.0-17ubuntu3 [13.6 kB] 404s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1026 B] 404s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf gfortran armhf 4:14.2.0-1ubuntu1 [1166 B] 404s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf icu-devtools armhf 76.1-1ubuntu2 [206 kB] 404s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libblas-dev armhf 3.12.1-2 [141 kB] 404s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libbz2-dev armhf 1.0.8-6 [30.9 kB] 404s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate-dev armhf 1.23-1 [45.0 kB] 404s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libicu-dev armhf 76.1-1ubuntu2 [12.0 MB] 418s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8-dev armhf 2.1.5-3ubuntu2 [265 kB] 418s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] 418s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] 418s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack-dev armhf 3.12.1-2 [2207 kB] 421s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libncurses-dev armhf 6.5+20250216-2 [345 kB] 421s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-16-0 armhf 10.45-1 [207 kB] 421s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-32-0 armhf 10.45-1 [197 kB] 422s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-posix3 armhf 10.45-1 [6300 B] 422s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-dev armhf 10.45-1 [752 kB] 423s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libpkgconf3 armhf 1.8.1-4 [26.6 kB] 423s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 424s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf libpng-dev armhf 1.6.47-1 [251 kB] 424s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libreadline-dev armhf 8.2-6 [153 kB] 424s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf liblzma-dev armhf 5.6.4-1 [166 kB] 424s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf-bin armhf 1.8.1-4 [21.2 kB] 424s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf pkgconf armhf 1.8.1-4 [16.8 kB] 424s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libtirpc-dev armhf 1.3.4+ds-1.3 [184 kB] 424s Get:54 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-dev all 4.4.3-1 [4176 B] 424s Get:55 http://ftpmaster.internal/ubuntu plucky/universe armhf pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 425s Fetched 78.1 MB in 1min 34s (827 kB/s) 425s Selecting previously unselected package libc-dev-bin. 425s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 66979 files and directories currently installed.) 425s Preparing to unpack .../00-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 425s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 425s Selecting previously unselected package linux-libc-dev:armhf. 425s Preparing to unpack .../01-linux-libc-dev_6.14.0-10.10_armhf.deb ... 425s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 425s Selecting previously unselected package libcrypt-dev:armhf. 425s Preparing to unpack .../02-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 425s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 425s Selecting previously unselected package rpcsvc-proto. 425s Preparing to unpack .../03-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 425s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 425s Selecting previously unselected package libc6-dev:armhf. 425s Preparing to unpack .../04-libc6-dev_2.41-1ubuntu2_armhf.deb ... 425s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 426s Selecting previously unselected package libisl23:armhf. 426s Preparing to unpack .../05-libisl23_0.27-1_armhf.deb ... 426s Unpacking libisl23:armhf (0.27-1) ... 426s Selecting previously unselected package libmpc3:armhf. 426s Preparing to unpack .../06-libmpc3_1.3.1-1build2_armhf.deb ... 426s Unpacking libmpc3:armhf (1.3.1-1build2) ... 426s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 426s Preparing to unpack .../07-cpp-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 426s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 426s Selecting previously unselected package cpp-14. 426s Preparing to unpack .../08-cpp-14_14.2.0-17ubuntu3_armhf.deb ... 426s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 426s Selecting previously unselected package cpp-arm-linux-gnueabihf. 426s Preparing to unpack .../09-cpp-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 426s Unpacking cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 426s Selecting previously unselected package cpp. 426s Preparing to unpack .../10-cpp_4%3a14.2.0-1ubuntu1_armhf.deb ... 426s Unpacking cpp (4:14.2.0-1ubuntu1) ... 426s Selecting previously unselected package libcc1-0:armhf. 426s Preparing to unpack .../11-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 426s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 426s Selecting previously unselected package libasan8:armhf. 426s Preparing to unpack .../12-libasan8_15-20250222-0ubuntu1_armhf.deb ... 426s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 426s Selecting previously unselected package libubsan1:armhf. 426s Preparing to unpack .../13-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 426s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 426s Selecting previously unselected package libgcc-14-dev:armhf. 426s Preparing to unpack .../14-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 426s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 426s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 426s Preparing to unpack .../15-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 426s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 427s Selecting previously unselected package gcc-14. 427s Preparing to unpack .../16-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 427s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 427s Selecting previously unselected package gcc-arm-linux-gnueabihf. 427s Preparing to unpack .../17-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 427s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 427s Selecting previously unselected package gcc. 427s Preparing to unpack .../18-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 427s Unpacking gcc (4:14.2.0-1ubuntu1) ... 427s Selecting previously unselected package libstdc++-14-dev:armhf. 427s Preparing to unpack .../19-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 427s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 427s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 427s Preparing to unpack .../20-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 427s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 427s Selecting previously unselected package g++-14. 427s Preparing to unpack .../21-g++-14_14.2.0-17ubuntu3_armhf.deb ... 427s Unpacking g++-14 (14.2.0-17ubuntu3) ... 427s Selecting previously unselected package g++-arm-linux-gnueabihf. 427s Preparing to unpack .../22-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 427s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 427s Selecting previously unselected package g++. 427s Preparing to unpack .../23-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 427s Unpacking g++ (4:14.2.0-1ubuntu1) ... 428s Selecting previously unselected package build-essential. 428s Preparing to unpack .../24-build-essential_12.10ubuntu1_armhf.deb ... 428s Unpacking build-essential (12.10ubuntu1) ... 428s Selecting previously unselected package dctrl-tools. 428s Preparing to unpack .../25-dctrl-tools_2.24-3build3_armhf.deb ... 428s Unpacking dctrl-tools (2.24-3build3) ... 428s Selecting previously unselected package libgfortran-14-dev:armhf. 428s Preparing to unpack .../26-libgfortran-14-dev_14.2.0-17ubuntu3_armhf.deb ... 428s Unpacking libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 428s Selecting previously unselected package gfortran-14-arm-linux-gnueabihf. 428s Preparing to unpack .../27-gfortran-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 428s Unpacking gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 428s Selecting previously unselected package gfortran-14. 428s Preparing to unpack .../28-gfortran-14_14.2.0-17ubuntu3_armhf.deb ... 428s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 428s Selecting previously unselected package gfortran-arm-linux-gnueabihf. 428s Preparing to unpack .../29-gfortran-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 428s Unpacking gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 428s Selecting previously unselected package gfortran. 428s Preparing to unpack .../30-gfortran_4%3a14.2.0-1ubuntu1_armhf.deb ... 428s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 428s Selecting previously unselected package icu-devtools. 428s Preparing to unpack .../31-icu-devtools_76.1-1ubuntu2_armhf.deb ... 428s Unpacking icu-devtools (76.1-1ubuntu2) ... 428s Selecting previously unselected package libblas-dev:armhf. 428s Preparing to unpack .../32-libblas-dev_3.12.1-2_armhf.deb ... 428s Unpacking libblas-dev:armhf (3.12.1-2) ... 428s Selecting previously unselected package libbz2-dev:armhf. 428s Preparing to unpack .../33-libbz2-dev_1.0.8-6_armhf.deb ... 428s Unpacking libbz2-dev:armhf (1.0.8-6) ... 428s Selecting previously unselected package libdeflate-dev:armhf. 428s Preparing to unpack .../34-libdeflate-dev_1.23-1_armhf.deb ... 428s Unpacking libdeflate-dev:armhf (1.23-1) ... 428s Selecting previously unselected package libicu-dev:armhf. 428s Preparing to unpack .../35-libicu-dev_76.1-1ubuntu2_armhf.deb ... 428s Unpacking libicu-dev:armhf (76.1-1ubuntu2) ... 429s Selecting previously unselected package libjpeg-turbo8-dev:armhf. 429s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-3ubuntu2_armhf.deb ... 429s Unpacking libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 429s Selecting previously unselected package libjpeg8-dev:armhf. 429s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_armhf.deb ... 429s Unpacking libjpeg8-dev:armhf (8c-2ubuntu11) ... 429s Selecting previously unselected package libjpeg-dev:armhf. 429s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_armhf.deb ... 429s Unpacking libjpeg-dev:armhf (8c-2ubuntu11) ... 429s Selecting previously unselected package liblapack-dev:armhf. 429s Preparing to unpack .../39-liblapack-dev_3.12.1-2_armhf.deb ... 429s Unpacking liblapack-dev:armhf (3.12.1-2) ... 429s Selecting previously unselected package libncurses-dev:armhf. 429s Preparing to unpack .../40-libncurses-dev_6.5+20250216-2_armhf.deb ... 429s Unpacking libncurses-dev:armhf (6.5+20250216-2) ... 429s Selecting previously unselected package libpcre2-16-0:armhf. 429s Preparing to unpack .../41-libpcre2-16-0_10.45-1_armhf.deb ... 429s Unpacking libpcre2-16-0:armhf (10.45-1) ... 429s Selecting previously unselected package libpcre2-32-0:armhf. 429s Preparing to unpack .../42-libpcre2-32-0_10.45-1_armhf.deb ... 429s Unpacking libpcre2-32-0:armhf (10.45-1) ... 429s Selecting previously unselected package libpcre2-posix3:armhf. 429s Preparing to unpack .../43-libpcre2-posix3_10.45-1_armhf.deb ... 429s Unpacking libpcre2-posix3:armhf (10.45-1) ... 429s Selecting previously unselected package libpcre2-dev:armhf. 429s Preparing to unpack .../44-libpcre2-dev_10.45-1_armhf.deb ... 429s Unpacking libpcre2-dev:armhf (10.45-1) ... 429s Selecting previously unselected package libpkgconf3:armhf. 429s Preparing to unpack .../45-libpkgconf3_1.8.1-4_armhf.deb ... 429s Unpacking libpkgconf3:armhf (1.8.1-4) ... 429s Selecting previously unselected package zlib1g-dev:armhf. 429s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 429s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 429s Selecting previously unselected package libpng-dev:armhf. 429s Preparing to unpack .../47-libpng-dev_1.6.47-1_armhf.deb ... 429s Unpacking libpng-dev:armhf (1.6.47-1) ... 429s Selecting previously unselected package libreadline-dev:armhf. 429s Preparing to unpack .../48-libreadline-dev_8.2-6_armhf.deb ... 429s Unpacking libreadline-dev:armhf (8.2-6) ... 429s Selecting previously unselected package liblzma-dev:armhf. 429s Preparing to unpack .../49-liblzma-dev_5.6.4-1_armhf.deb ... 429s Unpacking liblzma-dev:armhf (5.6.4-1) ... 429s Selecting previously unselected package pkgconf-bin. 429s Preparing to unpack .../50-pkgconf-bin_1.8.1-4_armhf.deb ... 429s Unpacking pkgconf-bin (1.8.1-4) ... 429s Selecting previously unselected package pkgconf:armhf. 429s Preparing to unpack .../51-pkgconf_1.8.1-4_armhf.deb ... 429s Unpacking pkgconf:armhf (1.8.1-4) ... 429s Selecting previously unselected package libtirpc-dev:armhf. 429s Preparing to unpack .../52-libtirpc-dev_1.3.4+ds-1.3_armhf.deb ... 429s Unpacking libtirpc-dev:armhf (1.3.4+ds-1.3) ... 429s Selecting previously unselected package r-base-dev. 429s Preparing to unpack .../53-r-base-dev_4.4.3-1_all.deb ... 429s Unpacking r-base-dev (4.4.3-1) ... 429s Selecting previously unselected package pkg-r-autopkgtest. 429s Preparing to unpack .../54-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 429s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 429s Setting up linux-libc-dev:armhf (6.14.0-10.10) ... 429s Setting up libpcre2-16-0:armhf (10.45-1) ... 429s Setting up libpcre2-32-0:armhf (10.45-1) ... 429s Setting up libtirpc-dev:armhf (1.3.4+ds-1.3) ... 429s Setting up libpkgconf3:armhf (1.8.1-4) ... 429s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 429s Setting up libmpc3:armhf (1.3.1-1build2) ... 429s Setting up icu-devtools (76.1-1ubuntu2) ... 429s Setting up pkgconf-bin (1.8.1-4) ... 429s Setting up liblzma-dev:armhf (5.6.4-1) ... 429s Setting up libubsan1:armhf (15-20250222-0ubuntu1) ... 429s Setting up libpcre2-posix3:armhf (10.45-1) ... 429s Setting up libcrypt-dev:armhf (1:4.4.38-1) ... 429s Setting up libasan8:armhf (15-20250222-0ubuntu1) ... 429s Setting up libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 429s Setting up libisl23:armhf (0.27-1) ... 429s Setting up libc-dev-bin (2.41-1ubuntu2) ... 429s Setting up libdeflate-dev:armhf (1.23-1) ... 429s Setting up libcc1-0:armhf (15-20250222-0ubuntu1) ... 429s Setting up libblas-dev:armhf (3.12.1-2) ... 429s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode 429s Setting up dctrl-tools (2.24-3build3) ... 429s Setting up cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 429s Setting up libgfortran-14-dev:armhf (14.2.0-17ubuntu3) ... 429s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 429s Setting up pkgconf:armhf (1.8.1-4) ... 429s Setting up liblapack-dev:armhf (3.12.1-2) ... 429s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode 429s Setting up cpp-14 (14.2.0-17ubuntu3) ... 429s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 429s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 429s Setting up libicu-dev:armhf (76.1-1ubuntu2) ... 429s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 429s Setting up gfortran-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 429s Setting up libbz2-dev:armhf (1.0.8-6) ... 429s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 429s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 429s Setting up libjpeg-turbo8-dev:armhf (2.1.5-3ubuntu2) ... 429s Setting up libncurses-dev:armhf (6.5+20250216-2) ... 429s Setting up libpcre2-dev:armhf (10.45-1) ... 429s Setting up libreadline-dev:armhf (8.2-6) ... 429s Setting up gcc-14 (14.2.0-17ubuntu3) ... 429s Setting up gfortran-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 429s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 429s Setting up cpp (4:14.2.0-1ubuntu1) ... 429s Setting up g++-14 (14.2.0-17ubuntu3) ... 429s Setting up libjpeg8-dev:armhf (8c-2ubuntu11) ... 429s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 429s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 429s Setting up libpng-dev:armhf (1.6.47-1) ... 429s Setting up libjpeg-dev:armhf (8c-2ubuntu11) ... 429s Setting up gcc (4:14.2.0-1ubuntu1) ... 429s Setting up g++ (4:14.2.0-1ubuntu1) ... 429s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 429s Setting up build-essential (12.10ubuntu1) ... 429s Setting up gfortran (4:14.2.0-1ubuntu1) ... 429s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 429s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 429s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 429s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 429s Setting up r-base-dev (4.4.3-1) ... 429s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 429s Processing triggers for libc-bin (2.41-1ubuntu2) ... 429s Processing triggers for man-db (2.13.0-1) ... 431s Processing triggers for install-info (7.1.1-1) ... 438s autopkgtest [16:08:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 438s autopkgtest [16:08:21]: test pkg-r-autopkgtest: [----------------------- 440s Test: Try to load the R library circular 440s 440s R version 4.4.3 (2025-02-28) -- "Trophy Case" 440s Copyright (C) 2025 The R Foundation for Statistical Computing 440s Platform: arm-unknown-linux-gnueabihf (32-bit) 440s 440s R is free software and comes with ABSOLUTELY NO WARRANTY. 440s You are welcome to redistribute it under certain conditions. 440s Type 'license()' or 'licence()' for distribution details. 440s 440s R is a collaborative project with many contributors. 440s Type 'contributors()' for more information and 440s 'citation()' on how to cite R or R packages in publications. 440s 440s Type 'demo()' for some demos, 'help()' for on-line help, or 440s 'help.start()' for an HTML browser interface to help. 440s Type 'q()' to quit R. 440s 441s > library('circular') 441s 441s Attaching package: ‘circular’ 441s 441s > 441s > 441s Other tests are currently unsupported! 441s They will be progressively added. 441s The following objects are masked from ‘package:stats’: 441s 441s sd, var 441s 441s autopkgtest [16:08:24]: test pkg-r-autopkgtest: -----------------------] 445s autopkgtest [16:08:28]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 445s pkg-r-autopkgtest PASS 449s autopkgtest [16:08:32]: @@@@@@@@@@@@@@@@@@@@ summary 449s run-unit-test PASS 449s pkg-r-autopkgtest PASS