0s autopkgtest [10:05:11]: starting date and time: 2024-11-20 10:05:11+0000
  0s autopkgtest [10:05:11]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky
  0s autopkgtest [10:05:11]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.64hir5eq/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed --apt-upgrade python-prodigy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 -- lxd -r lxd-armhf-10.145.243.227 lxd-armhf-10.145.243.227:autopkgtest/ubuntu/plucky/armhf
 57s autopkgtest [10:06:08]: testbed dpkg architecture: armhf
 59s autopkgtest [10:06:10]: testbed apt version: 2.9.8
 59s autopkgtest [10:06:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 67s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB]
 67s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.5 kB]
 68s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B]
 68s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [56.4 kB]
 68s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [841 kB]
 68s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [61.7 kB]
 68s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [612 kB]
 69s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3240 B]
 69s Fetched 1669 kB in 2s (733 kB/s)
 69s Reading package lists...
 79s tee: /proc/self/fd/2: Permission denied
132s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease
132s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
132s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
132s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
134s Reading package lists...
134s Reading package lists...
135s Building dependency tree...
135s Reading state information...
136s Calculating upgrade...
136s The following packages were automatically installed and are no longer required:
136s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
136s Use 'apt autoremove' to remove them.
136s The following NEW packages will be installed:
136s   libjemalloc2 linux-headers-6.11.0-9 linux-headers-6.11.0-9-generic
136s   linux-sysctl-defaults python3-bcrypt python3-jaraco.text
137s The following packages will be upgraded:
137s   apt apt-utils distro-info ethtool gir1.2-girepository-2.0 gir1.2-glib-2.0
137s   iputils-ping iputils-tracepath libapt-pkg6.0t64 libgirepository-1.0-1
137s   libglib2.0-0t64 libglib2.0-data liblzma5 libnftables1 libnftnl11 libnss3
137s   libpam-modules libpam-modules-bin libpam-runtime libpam0g
137s   libpolkit-agent-1-0 libpolkit-gobject-1-0 libpython3-stdlib libxml2
137s   linux-headers-generic nftables pinentry-curses python-apt-common python3
137s   python3-apt python3-attr python3-cryptography
137s   python3-jsonschema-specifications python3-minimal python3-pkg-resources
137s   python3-rpds-py python3-setuptools tmux xz-utils
137s 39 upgraded, 6 newly installed, 0 to remove and 0 not upgraded.
137s Need to get 26.4 MB of archives.
137s After this operation, 96.3 MB of additional disk space will be used.
137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf liblzma5 armhf 5.6.3-1 [123 kB]
137s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libapt-pkg6.0t64 armhf 2.9.12 [1032 kB]
138s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf apt armhf 2.9.12 [1349 kB]
139s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf apt-utils armhf 2.9.12 [212 kB]
139s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpam0g armhf 1.5.3-7ubuntu4 [62.9 kB]
139s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpam-modules-bin armhf 1.5.3-7ubuntu4 [46.9 kB]
139s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpam-modules armhf 1.5.3-7ubuntu4 [266 kB]
140s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB]
140s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB]
140s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB]
140s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpam-runtime all 1.5.3-7ubuntu4 [40.8 kB]
140s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf distro-info armhf 1.12 [19.3 kB]
140s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf gir1.2-girepository-2.0 armhf 1.82.0-2 [25.3 kB]
140s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf gir1.2-glib-2.0 armhf 2.82.2-3 [182 kB]
140s Get:15 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libglib2.0-0t64 armhf 2.82.2-3 [1443 kB]
141s Get:16 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libgirepository-1.0-1 armhf 1.82.0-2 [108 kB]
141s Get:17 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf iputils-ping armhf 3:20240905-1 [43.7 kB]
142s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libglib2.0-data all 2.82.2-3 [51.7 kB]
142s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2build1 [599 kB]
142s Get:20 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python-apt-common all 2.9.0ubuntu2 [20.3 kB]
142s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-apt armhf 2.9.0ubuntu2 [176 kB]
142s Get:22 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf ethtool armhf 1:6.11-1 [222 kB]
143s Get:23 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf iputils-tracepath armhf 3:20240905-1 [13.0 kB]
143s Get:24 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf nftables armhf 1.1.1-1build1 [70.8 kB]
143s Get:25 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libnftnl11 armhf 1.2.8-1 [53.3 kB]
143s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libnftables1 armhf 1.1.1-1build1 [321 kB]
143s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf xz-utils armhf 5.6.3-1 [271 kB]
143s Get:28 http://ftpmaster.internal/ubuntu plucky/universe armhf libjemalloc2 armhf 5.3.0-2build1 [200 kB]
143s Get:29 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libnss3 armhf 2:3.106-1 [1316 kB]
145s Get:30 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpolkit-agent-1-0 armhf 125-2 [15.1 kB]
145s Get:31 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpolkit-gobject-1-0 armhf 125-2 [44.8 kB]
145s Get:32 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf linux-headers-6.11.0-9 all 6.11.0-9.9 [13.9 MB]
156s Get:33 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf linux-headers-6.11.0-9-generic armhf 6.11.0-9.9 [1343 kB]
157s Get:34 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf linux-headers-generic armhf 6.11.0-9.9 [10.7 kB]
157s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf linux-sysctl-defaults all 4.10.1ubuntu1 [5432 B]
157s Get:36 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf pinentry-curses armhf 1.3.1-0ubuntu1 [40.0 kB]
157s Get:37 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-attr all 24.2.0-1 [50.2 kB]
157s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf python3-bcrypt armhf 4.2.0-2.1 [239 kB]
158s Get:39 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-cryptography armhf 43.0.0-1 [925 kB]
158s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jaraco.text all 4.0.0-1 [11.5 kB]
158s Get:41 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-rpds-py armhf 0.21.0-2ubuntu1 [296 kB]
159s Get:42 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-jsonschema-specifications all 2023.12.1-2 [9116 B]
159s Get:43 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-pkg-resources all 75.2.0-1 [134 kB]
159s Get:44 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-setuptools all 75.2.0-1 [657 kB]
159s Get:45 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf tmux armhf 3.5a-2 [406 kB]
160s Preconfiguring packages ...
161s Fetched 26.4 MB in 23s (1134 kB/s)
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161s Preparing to unpack .../liblzma5_5.6.3-1_armhf.deb ...
161s Unpacking liblzma5:armhf (5.6.3-1) over (5.6.2-2) ...
161s Setting up liblzma5:armhf (5.6.3-1) ...
161s (Reading database ... 
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161s Preparing to unpack .../libapt-pkg6.0t64_2.9.12_armhf.deb ...
161s Unpacking libapt-pkg6.0t64:armhf (2.9.12) over (2.9.8) ...
161s Setting up libapt-pkg6.0t64:armhf (2.9.12) ...
161s (Reading database ... 
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161s Preparing to unpack .../archives/apt_2.9.12_armhf.deb ...
161s Unpacking apt (2.9.12) over (2.9.8) ...
161s Setting up apt (2.9.12) ...
162s (Reading database ... 
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162s Preparing to unpack .../apt-utils_2.9.12_armhf.deb ...
162s Unpacking apt-utils (2.9.12) over (2.9.8) ...
162s Preparing to unpack .../libpam0g_1.5.3-7ubuntu4_armhf.deb ...
162s Unpacking libpam0g:armhf (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
162s Setting up libpam0g:armhf (1.5.3-7ubuntu4) ...
162s (Reading database ... 
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162s Preparing to unpack .../libpam-modules-bin_1.5.3-7ubuntu4_armhf.deb ...
162s Unpacking libpam-modules-bin (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
162s Setting up libpam-modules-bin (1.5.3-7ubuntu4) ...
163s pam_namespace.service is a disabled or a static unit not running, not starting it.
163s (Reading database ... 
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163s Preparing to unpack .../libpam-modules_1.5.3-7ubuntu4_armhf.deb ...
163s Unpacking libpam-modules:armhf (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
163s Setting up libpam-modules:armhf (1.5.3-7ubuntu4) ...
163s (Reading database ... 
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163s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ...
163s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ...
163s Setting up python3-minimal (3.12.7-1) ...
163s (Reading database ... 
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163s Preparing to unpack .../python3_3.12.7-1_armhf.deb ...
164s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ...
164s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ...
164s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ...
164s Preparing to unpack .../libpam-runtime_1.5.3-7ubuntu4_all.deb ...
164s Unpacking libpam-runtime (1.5.3-7ubuntu4) over (1.5.3-7ubuntu2) ...
164s Setting up libpam-runtime (1.5.3-7ubuntu4) ...
164s (Reading database ... 
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164s Preparing to unpack .../00-distro-info_1.12_armhf.deb ...
164s Unpacking distro-info (1.12) over (1.9) ...
164s Preparing to unpack .../01-gir1.2-girepository-2.0_1.82.0-2_armhf.deb ...
164s Unpacking gir1.2-girepository-2.0:armhf (1.82.0-2) over (1.80.1-4) ...
164s Preparing to unpack .../02-gir1.2-glib-2.0_2.82.2-3_armhf.deb ...
164s Unpacking gir1.2-glib-2.0:armhf (2.82.2-3) over (2.82.1-0ubuntu1) ...
164s Preparing to unpack .../03-libglib2.0-0t64_2.82.2-3_armhf.deb ...
164s Unpacking libglib2.0-0t64:armhf (2.82.2-3) over (2.82.1-0ubuntu1) ...
164s Preparing to unpack .../04-libgirepository-1.0-1_1.82.0-2_armhf.deb ...
164s Unpacking libgirepository-1.0-1:armhf (1.82.0-2) over (1.80.1-4) ...
164s Preparing to unpack .../05-iputils-ping_3%3a20240905-1_armhf.deb ...
164s Unpacking iputils-ping (3:20240905-1) over (3:20240117-1build1) ...
164s Preparing to unpack .../06-libglib2.0-data_2.82.2-3_all.deb ...
164s Unpacking libglib2.0-data (2.82.2-3) over (2.82.1-0ubuntu1) ...
164s Preparing to unpack .../07-libxml2_2.12.7+dfsg+really2.9.14-0.2build1_armhf.deb ...
164s Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2build1) over (2.12.7+dfsg-3) ...
164s Preparing to unpack .../08-python-apt-common_2.9.0ubuntu2_all.deb ...
164s Unpacking python-apt-common (2.9.0ubuntu2) over (2.9.0ubuntu1) ...
165s Preparing to unpack .../09-python3-apt_2.9.0ubuntu2_armhf.deb ...
165s Unpacking python3-apt (2.9.0ubuntu2) over (2.9.0ubuntu1) ...
165s Preparing to unpack .../10-ethtool_1%3a6.11-1_armhf.deb ...
165s Unpacking ethtool (1:6.11-1) over (1:6.10-1) ...
165s Preparing to unpack .../11-iputils-tracepath_3%3a20240905-1_armhf.deb ...
165s Unpacking iputils-tracepath (3:20240905-1) over (3:20240117-1build1) ...
165s Preparing to unpack .../12-nftables_1.1.1-1build1_armhf.deb ...
165s Unpacking nftables (1.1.1-1build1) over (1.1.0-2) ...
165s Preparing to unpack .../13-libnftnl11_1.2.8-1_armhf.deb ...
165s Unpacking libnftnl11:armhf (1.2.8-1) over (1.2.7-1) ...
165s Preparing to unpack .../14-libnftables1_1.1.1-1build1_armhf.deb ...
165s Unpacking libnftables1:armhf (1.1.1-1build1) over (1.1.0-2) ...
165s Preparing to unpack .../15-xz-utils_5.6.3-1_armhf.deb ...
165s Unpacking xz-utils (5.6.3-1) over (5.6.2-2) ...
165s Selecting previously unselected package libjemalloc2:armhf.
165s Preparing to unpack .../16-libjemalloc2_5.3.0-2build1_armhf.deb ...
165s Unpacking libjemalloc2:armhf (5.3.0-2build1) ...
165s Preparing to unpack .../17-libnss3_2%3a3.106-1_armhf.deb ...
165s Unpacking libnss3:armhf (2:3.106-1) over (2:3.103-1) ...
165s Preparing to unpack .../18-libpolkit-agent-1-0_125-2_armhf.deb ...
165s Unpacking libpolkit-agent-1-0:armhf (125-2) over (124-2ubuntu1) ...
165s Preparing to unpack .../19-libpolkit-gobject-1-0_125-2_armhf.deb ...
165s Unpacking libpolkit-gobject-1-0:armhf (125-2) over (124-2ubuntu1) ...
165s Selecting previously unselected package linux-headers-6.11.0-9.
165s Preparing to unpack .../20-linux-headers-6.11.0-9_6.11.0-9.9_all.deb ...
165s Unpacking linux-headers-6.11.0-9 (6.11.0-9.9) ...
169s Selecting previously unselected package linux-headers-6.11.0-9-generic.
169s Preparing to unpack .../21-linux-headers-6.11.0-9-generic_6.11.0-9.9_armhf.deb ...
169s Unpacking linux-headers-6.11.0-9-generic (6.11.0-9.9) ...
171s Preparing to unpack .../22-linux-headers-generic_6.11.0-9.9_armhf.deb ...
171s Unpacking linux-headers-generic (6.11.0-9.9) over (6.11.0-8.8) ...
171s Selecting previously unselected package linux-sysctl-defaults.
171s Preparing to unpack .../23-linux-sysctl-defaults_4.10.1ubuntu1_all.deb ...
171s Unpacking linux-sysctl-defaults (4.10.1ubuntu1) ...
171s Preparing to unpack .../24-pinentry-curses_1.3.1-0ubuntu1_armhf.deb ...
171s Unpacking pinentry-curses (1.3.1-0ubuntu1) over (1.2.1-3ubuntu5) ...
171s Preparing to unpack .../25-python3-attr_24.2.0-1_all.deb ...
171s Unpacking python3-attr (24.2.0-1) over (23.2.0-2) ...
171s Selecting previously unselected package python3-bcrypt.
171s Preparing to unpack .../26-python3-bcrypt_4.2.0-2.1_armhf.deb ...
171s Unpacking python3-bcrypt (4.2.0-2.1) ...
171s Preparing to unpack .../27-python3-cryptography_43.0.0-1_armhf.deb ...
171s Unpacking python3-cryptography (43.0.0-1) over (42.0.5-2build1) ...
171s Selecting previously unselected package python3-jaraco.text.
172s Preparing to unpack .../28-python3-jaraco.text_4.0.0-1_all.deb ...
172s Unpacking python3-jaraco.text (4.0.0-1) ...
172s Preparing to unpack .../29-python3-rpds-py_0.21.0-2ubuntu1_armhf.deb ...
172s Unpacking python3-rpds-py (0.21.0-2ubuntu1) over (0.20.0-0ubuntu3) ...
172s Preparing to unpack .../30-python3-jsonschema-specifications_2023.12.1-2_all.deb ...
172s Unpacking python3-jsonschema-specifications (2023.12.1-2) over (2023.12.1-1ubuntu1) ...
172s Preparing to unpack .../31-python3-pkg-resources_75.2.0-1_all.deb ...
172s Unpacking python3-pkg-resources (75.2.0-1) over (74.1.2-1) ...
172s Preparing to unpack .../32-python3-setuptools_75.2.0-1_all.deb ...
172s Unpacking python3-setuptools (75.2.0-1) over (74.1.2-1) ...
172s Preparing to unpack .../33-tmux_3.5a-2_armhf.deb ...
172s Unpacking tmux (3.5a-2) over (3.4-7) ...
173s Setting up pinentry-curses (1.3.1-0ubuntu1) ...
173s Setting up distro-info (1.12) ...
173s Setting up apt-utils (2.9.12) ...
173s Setting up libnftnl11:armhf (1.2.8-1) ...
173s Setting up libnss3:armhf (2:3.106-1) ...
173s Setting up libjemalloc2:armhf (5.3.0-2build1) ...
173s Setting up libglib2.0-0t64:armhf (2.82.2-3) ...
173s No schema files found: doing nothing.
173s Setting up libglib2.0-data (2.82.2-3) ...
173s Setting up linux-sysctl-defaults (4.10.1ubuntu1) ...
173s Setting up xz-utils (5.6.3-1) ...
173s Setting up linux-headers-6.11.0-9 (6.11.0-9.9) ...
173s Setting up gir1.2-glib-2.0:armhf (2.82.2-3) ...
173s Setting up python-apt-common (2.9.0ubuntu2) ...
173s Setting up libgirepository-1.0-1:armhf (1.82.0-2) ...
173s Setting up iputils-ping (3:20240905-1) ...
173s Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2build1) ...
173s Setting up tmux (3.5a-2) ...
173s Setting up libpolkit-gobject-1-0:armhf (125-2) ...
173s Setting up iputils-tracepath (3:20240905-1) ...
173s Setting up libpython3-stdlib:armhf (3.12.7-1) ...
173s Setting up ethtool (1:6.11-1) ...
173s Setting up libnftables1:armhf (1.1.1-1build1) ...
173s Setting up nftables (1.1.1-1build1) ...
173s Setting up python3 (3.12.7-1) ...
174s Setting up linux-headers-6.11.0-9-generic (6.11.0-9.9) ...
174s Setting up gir1.2-girepository-2.0:armhf (1.82.0-2) ...
174s Setting up python3-jaraco.text (4.0.0-1) ...
174s Setting up python3-rpds-py (0.21.0-2ubuntu1) ...
174s Setting up libpolkit-agent-1-0:armhf (125-2) ...
174s Setting up python3-jsonschema-specifications (2023.12.1-2) ...
174s Setting up python3-pkg-resources (75.2.0-1) ...
174s Setting up python3-attr (24.2.0-1) ...
174s Setting up python3-setuptools (75.2.0-1) ...
175s Setting up python3-apt (2.9.0ubuntu2) ...
176s Setting up python3-bcrypt (4.2.0-2.1) ...
176s Setting up linux-headers-generic (6.11.0-9.9) ...
176s Setting up python3-cryptography (43.0.0-1) ...
176s Processing triggers for libc-bin (2.40-1ubuntu3) ...
176s Processing triggers for man-db (2.13.0-1) ...
178s Processing triggers for debianutils (5.21) ...
180s Reading package lists...
180s Building dependency tree...
180s Reading state information...
181s The following packages will be REMOVED:
181s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
182s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded.
182s After this operation, 93.6 MB disk space will be freed.
182s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
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(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 91359 files and directories currently installed.)
182s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
182s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
186s autopkgtest [10:08:17]: rebooting testbed after setup commands that affected boot
255s autopkgtest [10:09:26]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct  7 11:49:53 UTC 2
282s autopkgtest [10:09:53]: @@@@@@@@@@@@@@@@@@@@ apt-source python-prodigy
297s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (dsc) [2228 B]
297s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (tar) [5709 kB]
297s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (diff) [1956 B]
297s gpgv: Signature made Mon Oct  7 11:27:29 2024 UTC
297s gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
297s gpgv:                issuer "merkys@debian.org"
297s gpgv: Can't check signature: No public key
297s dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.3-1.dsc: no acceptable signature found
297s autopkgtest [10:10:08]: testing package python-prodigy version 2.2.3-1
299s autopkgtest [10:10:10]: build not needed
302s autopkgtest [10:10:13]: test pybuild-autopkgtest: preparing testbed
313s Reading package lists...
314s Building dependency tree...
314s Reading state information...
314s Starting pkgProblemResolver with broken count: 0
315s Starting 2 pkgProblemResolver with broken count: 0
315s Done
316s The following additional packages will be installed:
316s   autoconf automake autopoint autotools-dev build-essential cpp cpp-14
316s   cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper debugedit
316s   dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config
316s   fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ g++-14
316s   g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14
316s   gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext help2man
316s   intltool-debian libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev
316s   libcairo2 libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
316s   libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6
316s   libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b
316s   libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3
316s   liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal
316s   libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool
316s   libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0
316s   libxrender1 linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest
316s   pybuild-plugin-pyproject python3-all python3-biopython python3-build
316s   python3-cairo python3-freesasa python3-freetype python3-installer
316s   python3-numpy python3-packaging python3-pil python3-poetry-core
316s   python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo
316s   python3-toml python3-wheel python3.13 python3.13-minimal rpcsvc-proto
316s   sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core
316s Suggested packages:
316s   autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales
316s   cpp-14-doc dh-make flit fonts-freefont-otf | fonts-freefont-ttf
316s   fonts-texgyre gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc
316s   gdb-arm-linux-gnueabihf gettext-doc libasprintf-dev libgettextpo-dev
316s   libc-devtools glibc-doc liblcms2-utils libstdc++-14-doc libtool-doc gfortran
316s   | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-tk bwa clustalo
316s   clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank
316s   probcons python3-mysqldb python3-matplotlib python3-mmtf python3-rdflib
316s   python3-psycopg2 python3-scipy raxml samtools t-coffee wise python3-pip
316s   python3-venv python-build-doc python-freesasa-doc python-installer-doc
316s   gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc
316s   pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel
316s   rl-renderpm python3.13-venv python3.13-doc binfmt-support sgml-base-doc
316s Recommended packages:
316s   manpages manpages-dev libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
316s   python-biopython-doc ncbi-blast+ python3-olefile fonts-dejavu-extra
316s The following NEW packages will be installed:
316s   autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential
316s   cpp cpp-14 cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper
316s   debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz
316s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++
316s   g++-14 g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14
316s   gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext help2man
316s   intltool-debian libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev
316s   libcairo2 libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0
316s   libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6
316s   libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b
316s   libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3
316s   liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal
316s   libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool
316s   libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0
316s   libxrender1 linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest
316s   pybuild-plugin-pyproject python3-all python3-biopython python3-build
316s   python3-cairo python3-freesasa python3-freetype python3-installer
316s   python3-numpy python3-packaging python3-pil python3-poetry-core
316s   python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo
316s   python3-toml python3-wheel python3.13 python3.13-minimal rpcsvc-proto
316s   sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core
316s 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded.
316s Need to get 86.7 MB/86.7 MB of archives.
316s After this operation, 257 MB of additional disk space will be used.
316s Get:1 /tmp/autopkgtest.SuXVER/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [820 B]
316s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB]
317s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB]
318s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB]
318s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-4build1 [235 kB]
318s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3 [382 kB]
319s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB]
319s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB]
319s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.22.5-2 [616 kB]
320s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libc-dev-bin armhf 2.40-1ubuntu3 [19.2 kB]
320s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf linux-libc-dev armhf 6.11.0-9.9 [1627 kB]
321s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.36-5 [119 kB]
321s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB]
321s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libc6-dev armhf 2.40-1ubuntu3 [1370 kB]
322s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB]
322s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB]
323s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [9219 kB]
329s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-8ubuntu1 [1032 B]
329s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [5464 B]
329s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.1.0-2ubuntu1 [22.4 kB]
329s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 14.2.0-8ubuntu1 [43.3 kB]
329s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 14.2.0-8ubuntu1 [125 kB]
329s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 14.2.0-8ubuntu1 [2901 kB]
332s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 14.2.0-8ubuntu1 [1150 kB]
333s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-8ubuntu1 [897 kB]
333s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [18.0 MB]
347s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-8ubuntu1 [498 kB]
347s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [1222 B]
347s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.1.0-2ubuntu1 [5002 B]
347s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-8ubuntu1 [2569 kB]
349s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [10.5 MB]
356s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-8ubuntu1 [19.9 kB]
356s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [968 B]
356s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.1.0-2ubuntu1 [1084 B]
356s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B]
356s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.20ubuntu1 [94.2 kB]
356s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.4.7-8 [166 kB]
356s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB]
356s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB]
356s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB]
356s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.0-1 [5058 B]
356s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-1 [46.5 kB]
356s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB]
356s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.22.5-2 [995 kB]
357s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB]
357s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB]
357s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.20ubuntu1 [893 kB]
358s Get:48 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20241024 [112 kB]
358s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB]
358s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB]
359s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libfontenc1 armhf 1:1.1.8-1build1 [11.5 kB]
359s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB]
359s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB]
359s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB]
359s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-utils armhf 1:7.7+7 [90.6 kB]
359s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-urw-base35 all 20200910-8 [11.0 MB]
366s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB]
366s Get:58 http://ftpmaster.internal/ubuntu plucky/universe armhf help2man armhf 1.49.3 [200 kB]
367s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB]
367s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB]
367s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB]
367s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB]
367s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B]
367s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB]
367s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB]
367s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.22-1 [38.9 kB]
367s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB]
367s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB]
367s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.0.1-1 [463 kB]
368s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB]
368s Get:71 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB]
368s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B]
368s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB]
369s Get:74 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB]
369s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB]
370s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB]
371s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.1-1build1 [12.4 kB]
371s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB]
371s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB]
371s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB]
371s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB]
372s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.4.0-0.1 [11.8 kB]
372s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.4.0-0.1 [22.5 kB]
372s Get:84 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-autopkgtest all 6.20241024 [1746 B]
372s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.2-1 [51.5 kB]
372s Get:86 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB]
372s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB]
372s Get:88 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python3-wheel all 0.45.0-1 [57.7 kB]
372s Get:89 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB]
372s Get:90 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB]
372s Get:91 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20241024 [1728 B]
372s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB]
372s Get:93 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B]
372s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11ubuntu1 [3975 kB]
375s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.0-2ubuntu1 [170 kB]
375s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 10.4.0-1ubuntu2 [446 kB]
376s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cairo armhf 1.26.1-2build1 [129 kB]
376s Get:98 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-freetype all 2.5.1-1 [92.3 kB]
376s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-rlpycairo all 0.3.0-3 [9130 B]
376s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-reportlab all 4.2.5-1 [1107 kB]
377s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB]
377s Get:102 http://ftpmaster.internal/ubuntu plucky/universe armhf w3c-sgml-lib all 1.3-3 [280 kB]
377s Get:103 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-biopython armhf 1.84+dfsg-4build1 [1672 kB]
378s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-freesasa armhf 2.1.0-3build4 [181 kB]
378s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-poetry-core all 1.9.0-2build1 [203 kB]
378s Get:106 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-prodigy all 2.2.3-1 [15.7 kB]
379s Fetched 86.7 MB in 1min 2s (1387 kB/s)
379s Selecting previously unselected package libpython3.13-minimal:armhf.
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379s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_armhf.deb ...
379s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ...
379s Selecting previously unselected package python3.13-minimal.
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379s Unpacking python3.13-minimal (3.13.0-2) ...
379s Selecting previously unselected package sgml-base.
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380s Preparing to unpack .../009-linux-libc-dev_6.11.0-9.9_armhf.deb ...
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381s Selecting previously unselected package cpp-14-arm-linux-gnueabihf.
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382s Selecting previously unselected package libstdc++-14-dev:armhf.
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382s Selecting previously unselected package g++-14-arm-linux-gnueabihf.
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383s Selecting previously unselected package g++-arm-linux-gnueabihf.
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384s Selecting previously unselected package libfontenc1:armhf.
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385s Selecting previously unselected package libxrender1:armhf.
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385s Selecting previously unselected package libcairo2:armhf.
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386s Selecting previously unselected package libgfortran5:armhf.
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387s Selecting previously unselected package python3-numpy.
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387s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ...
388s Selecting previously unselected package libopenjp2-7:armhf.
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388s Unpacking libopenjp2-7:armhf (2.5.0-2ubuntu1) ...
388s Selecting previously unselected package python3-pil:armhf.
388s Preparing to unpack .../094-python3-pil_10.4.0-1ubuntu2_armhf.deb ...
388s Unpacking python3-pil:armhf (10.4.0-1ubuntu2) ...
388s Selecting previously unselected package python3-cairo.
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388s Unpacking python3-cairo (1.26.1-2build1) ...
388s Selecting previously unselected package python3-freetype.
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388s Unpacking python3-freetype (2.5.1-1) ...
388s Selecting previously unselected package python3-rlpycairo.
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388s Selecting previously unselected package python3-reportlab.
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388s Selecting previously unselected package xml-core.
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388s Selecting previously unselected package w3c-sgml-lib.
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388s Selecting previously unselected package python3-biopython.
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389s Setting up dh-python (6.20241024) ...
389s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ...
389s Setting up liblcms2-2:armhf (2.16-2) ...
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389s Setting up x11-common (1:7.7+23ubuntu3) ...
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389s Setting up linux-libc-dev:armhf (6.11.0-9.9) ...
389s Setting up m4 (1.4.19-4build1) ...
389s Setting up libxcb-shm0:armhf (1.17.0-2) ...
389s Setting up libgomp1:armhf (14.2.0-8ubuntu1) ...
389s Setting up python3-wheel (0.45.0-1) ...
390s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ...
390s Setting up help2man (1.49.3) ...
390s Setting up libpython3.13-minimal:armhf (3.13.0-2) ...
390s Setting up python3-freesasa (2.1.0-3build4) ...
390s Setting up libfontenc1:armhf (1:1.1.8-1build1) ...
390s Setting up autotools-dev (20220109.1) ...
390s Setting up libblas3:armhf (3.12.0-3build2) ...
390s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
390s Setting up python3-packaging (24.2-1) ...
390s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ...
390s Setting up python3-pyproject-hooks (1.2.0-1) ...
391s Setting up libfreetype6:armhf (2.13.3+dfsg-1) ...
391s Setting up python3-poetry-core (1.9.0-2build1) ...
391s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ...
391s Setting up libimagequant0:armhf (2.18.0-1build1) ...
391s Setting up fonts-dejavu-mono (2.37-8) ...
391s Setting up libmpc3:armhf (1.3.1-1build2) ...
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392s Setting up python3-installer (0.7.0+dfsg1-3) ...
392s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ...
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392s Setting up python3.13-minimal (3.13.0-2) ...
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394s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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394s Setting up liblapack3:armhf (3.12.0-3build2) ...
394s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
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394s Setting up python3.13 (3.13.0-2) ...
395s Setting up pybuild-plugin-pyproject (6.20241024) ...
395s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
395s Setting up libwebpdemux2:armhf (1.4.0-0.1) ...
395s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ...
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395s Setting up python3-freetype (2.5.1-1) ...
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396s Setting up libraqm0:armhf (0.10.1-1build1) ...
396s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ...
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401s Setting up libfontconfig1:armhf (2.15.0-1.1ubuntu2) ...
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402s Setting up cpp (4:14.1.0-2ubuntu1) ...
402s Setting up g++-14 (14.2.0-8ubuntu1) ...
402s Setting up g++-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ...
402s Setting up python3-cairo (1.26.1-2build1) ...
402s Setting up libtool (2.4.7-8) ...
402s Setting up gcc (4:14.1.0-2ubuntu1) ...
402s Setting up dh-autoreconf (20) ...
402s Setting up python3-rlpycairo (0.3.0-3) ...
403s Setting up python3-reportlab (4.2.5-1) ...
405s Setting up g++ (4:14.1.0-2ubuntu1) ...
405s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
405s Setting up build-essential (12.10ubuntu1) ...
405s Setting up debhelper (13.20ubuntu1) ...
405s Setting up pybuild-plugin-autopkgtest (6.20241024) ...
405s Processing triggers for libc-bin (2.40-1ubuntu3) ...
405s Processing triggers for systemd (256.5-2ubuntu4) ...
405s Processing triggers for man-db (2.13.0-1) ...
406s Processing triggers for install-info (7.1.1-1) ...
406s Processing triggers for sgml-base (1.31) ...
406s Setting up w3c-sgml-lib (1.3-3) ...
440s Setting up python3-biopython (1.84+dfsg-4build1) ...
444s Setting up python3-prodigy (2.2.3-1) ...
444s Setting up autopkgtest-satdep (0) ...
464s (Reading database ... 67977 files and directories currently installed.)
464s Removing autopkgtest-satdep (0) ...
471s autopkgtest [10:13:02]: test pybuild-autopkgtest: pybuild-autopkgtest
471s autopkgtest [10:13:02]: test pybuild-autopkgtest: [-----------------------
473s pybuild-autopkgtest
474s I: pybuild base:311: cd /tmp/autopkgtest.SuXVER/autopkgtest_tmp/build; python3.13 -m unittest discover -v 
474s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset)
499s Test method to compare prediction for 80 dataset cases with ... ok
499s 
499s ----------------------------------------------------------------------
499s Ran 1 test in 24.518s
499s 
499s OK
499s Deltas:
499s   ba_val max: 1.03%
499s   ba_val mean: 0.29%
499s   nis_a max: 0.53%
499s   nis_a mean: 0.02%
499s   nis_c max: 0.44%
499s   nis_c mean: 0.02%
499s I: pybuild base:311: cd /tmp/autopkgtest.SuXVER/autopkgtest_tmp/build; python3.12 -m unittest discover -v 
499s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset)
526s Test method to compare prediction for 80 dataset cases with ... Deltas:
526s   ba_val max: 1.03%
526s   ba_val mean: 0.29%
526s   nis_a max: 0.53%
526s   nis_a mean: 0.02%
526s   nis_c max: 0.44%
526s   nis_c mean: 0.02%
526s ok
526s 
526s ----------------------------------------------------------------------
526s Ran 1 test in 26.277s
526s 
526s OK
526s autopkgtest [10:13:57]: test pybuild-autopkgtest: -----------------------]
530s autopkgtest [10:14:01]: test pybuild-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
530s pybuild-autopkgtest  PASS
534s autopkgtest [10:14:05]: @@@@@@@@@@@@@@@@@@@@ summary
534s pybuild-autopkgtest  PASS