0s autopkgtest [00:43:43]: starting date and time: 2024-11-14 00:43:43+0000 0s autopkgtest [00:43:43]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [00:43:43]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._czufu15/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-prodigy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- lxd -r lxd-armhf-10.145.243.85 lxd-armhf-10.145.243.85:autopkgtest/ubuntu/plucky/armhf 53s autopkgtest [00:44:36]: testbed dpkg architecture: armhf 56s autopkgtest [00:44:38]: testbed apt version: 2.9.8 56s autopkgtest [00:44:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 63s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 63s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 63s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 63s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [971 kB] 63s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 63s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [104 kB] 63s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [668 kB] 63s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [17.2 kB] 64s Fetched 1958 kB in 1s (2018 kB/s) 64s Reading package lists... 81s tee: /proc/self/fd/2: Permission denied 104s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 104s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 104s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 104s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 105s Reading package lists... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 106s Calculating upgrade... 107s The following NEW packages will be installed: 107s python3.13-gdbm 107s The following packages will be upgraded: 107s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 107s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 107s python3-newt whiptail 107s 11 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 107s Need to get 1207 kB of archives. 107s After this operation, 124 kB of additional disk space will be used. 107s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 107s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 107s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 107s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgnutls30t64 armhf 3.8.8-2ubuntu1 [955 kB] 107s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-newt armhf 0.52.24-2ubuntu4 [19.7 kB] 107s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libnewt0.52 armhf 0.52.24-2ubuntu4 [39.2 kB] 107s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf whiptail armhf 0.52.24-2ubuntu4 [17.2 kB] 107s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 107s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 107s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 107s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-3 [61.7 kB] 107s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libutempter0 armhf 1.2.1-4 [9062 B] 108s Fetched 1207 kB in 1s (1965 kB/s) 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 108s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ... 108s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 108s Setting up python3-minimal (3.12.7-1) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 108s Preparing to unpack .../python3_3.12.7-1_armhf.deb ... 108s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 108s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ... 108s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ... 109s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_armhf.deb ... 109s Unpacking libgnutls30t64:armhf (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 109s Setting up libgnutls30t64:armhf (3.8.8-2ubuntu1) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 109s Preparing to unpack .../0-python3-newt_0.52.24-2ubuntu4_armhf.deb ... 109s Unpacking python3-newt:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 109s Preparing to unpack .../1-libnewt0.52_0.52.24-2ubuntu4_armhf.deb ... 109s Unpacking libnewt0.52:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 109s Preparing to unpack .../2-whiptail_0.52.24-2ubuntu4_armhf.deb ... 109s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 109s Selecting previously unselected package python3.13-gdbm. 109s Preparing to unpack .../3-python3.13-gdbm_3.13.0-2_armhf.deb ... 109s Unpacking python3.13-gdbm (3.13.0-2) ... 109s Preparing to unpack .../4-python3-gdbm_3.12.7-1_armhf.deb ... 109s Unpacking python3-gdbm:armhf (3.12.7-1) over (3.12.6-1ubuntu1) ... 109s Preparing to unpack .../5-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 109s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 109s Preparing to unpack .../6-libjson-glib-1.0-0_1.10.0+ds-3_armhf.deb ... 109s Unpacking libjson-glib-1.0-0:armhf (1.10.0+ds-3) over (1.10.0+ds-2) ... 109s Preparing to unpack .../7-libutempter0_1.2.1-4_armhf.deb ... 109s Unpacking libutempter0:armhf (1.2.1-4) over (1.2.1-3build1) ... 109s Setting up libnewt0.52:armhf (0.52.24-2ubuntu4) ... 109s Setting up libutempter0:armhf (1.2.1-4) ... 109s Setting up whiptail (0.52.24-2ubuntu4) ... 109s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 109s Setting up python3.13-gdbm (3.13.0-2) ... 109s Setting up libpython3-stdlib:armhf (3.12.7-1) ... 109s Setting up python3 (3.12.7-1) ... 110s Setting up python3-newt:armhf (0.52.24-2ubuntu4) ... 110s Setting up libjson-glib-1.0-0:armhf (1.10.0+ds-3) ... 110s Setting up python3-gdbm:armhf (3.12.7-1) ... 110s Processing triggers for man-db (2.12.1-3) ... 110s Processing triggers for libc-bin (2.40-1ubuntu3) ... 111s Reading package lists... 111s Building dependency tree... 111s Reading state information... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 114s autopkgtest [00:45:37]: rebooting testbed after setup commands that affected boot 182s autopkgtest [00:46:45]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 209s autopkgtest [00:47:12]: @@@@@@@@@@@@@@@@@@@@ apt-source python-prodigy 219s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (dsc) [2228 B] 219s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (tar) [5709 kB] 219s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-prodigy 2.2.3-1 (diff) [1956 B] 219s gpgv: Signature made Mon Oct 7 11:27:29 2024 UTC 219s gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 219s gpgv: issuer "merkys@debian.org" 219s gpgv: Can't check signature: No public key 219s dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.3-1.dsc: no acceptable signature found 220s autopkgtest [00:47:23]: testing package python-prodigy version 2.2.3-1 222s autopkgtest [00:47:25]: build not needed 224s autopkgtest [00:47:27]: test pybuild-autopkgtest: preparing testbed 235s Reading package lists... 235s Building dependency tree... 235s Reading state information... 236s Starting pkgProblemResolver with broken count: 0 236s Starting 2 pkgProblemResolver with broken count: 0 236s Done 238s The following additional packages will be installed: 238s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 238s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper debugedit 238s dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig-config 238s fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ g++-14 238s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 238s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext help2man 238s intltool-debian libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev 238s libcairo2 libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 238s libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 238s libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 238s libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 238s liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 238s libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool 238s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 238s libxrender1 linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest 238s pybuild-plugin-pyproject python3-all python3-biopython python3-build 238s python3-cairo python3-freesasa python3-freetype python3-installer 238s python3-numpy python3-packaging python3-pil python3-poetry-core 238s python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo 238s python3-toml python3-wheel python3.13 python3.13-minimal rpcsvc-proto 238s sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 238s Suggested packages: 238s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 238s cpp-14-doc dh-make flit fonts-freefont-otf | fonts-freefont-ttf 238s fonts-texgyre gcc-14-doc gcc-multilib manpages-dev flex bison gdb gcc-doc 238s gdb-arm-linux-gnueabihf gettext-doc libasprintf-dev libgettextpo-dev 238s libc-devtools glibc-doc liblcms2-utils libstdc++-14-doc libtool-doc gfortran 238s | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-tk bwa clustalo 238s clustalw dialign dssp emboss fasttree mafft muscle3 phylip phyml prank 238s probcons python3-mysqldb python3-matplotlib python3-mmtf python3-rdflib 238s python3-psycopg2 python3-scipy raxml samtools t-coffee wise python3-pip 238s python3-venv python-build-doc python-freesasa-doc python-installer-doc 238s gfortran python-numpy-doc python3-dev python3-pytest python-pil-doc 238s pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel 238s rl-renderpm python3.13-venv python3.13-doc binfmt-support sgml-base-doc 238s Recommended packages: 238s manpages manpages-dev libarchive-cpio-perl libltdl-dev libmail-sendmail-perl 238s python-biopython-doc ncbi-blast+ python3-olefile fonts-dejavu-extra 238s The following NEW packages will be installed: 238s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 238s cpp cpp-14 cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper 238s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz 238s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 g++ 238s g++-14 g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 238s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext help2man 238s intltool-debian libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev 238s libcairo2 libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 238s libfile-stripnondeterminism-perl libfontconfig1 libfontenc1 libfreetype6 238s libgcc-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 238s libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 238s liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpixman-1-0 libpython3.13-minimal 238s libpython3.13-stdlib libraqm0 libsharpyuv0 libstdc++-14-dev libtiff6 libtool 238s libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libxcb-render0 libxcb-shm0 238s libxrender1 linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest 238s pybuild-plugin-pyproject python3-all python3-biopython python3-build 238s python3-cairo python3-freesasa python3-freetype python3-installer 238s python3-numpy python3-packaging python3-pil python3-poetry-core 238s python3-prodigy python3-pyproject-hooks python3-reportlab python3-rlpycairo 238s python3-toml python3-wheel python3.13 python3.13-minimal rpcsvc-proto 238s sgml-base w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 238s 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded. 238s Need to get 86.2 MB/86.2 MB of archives. 238s After this operation, 250 MB of additional disk space will be used. 238s Get:1 /tmp/autopkgtest.B7Yx5Y/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [820 B] 238s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB] 239s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB] 240s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB] 240s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-4build1 [235 kB] 240s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3 [382 kB] 240s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 240s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] 240s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.22.5-2 [616 kB] 240s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libc-dev-bin armhf 2.40-1ubuntu3 [19.2 kB] 240s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.11.0-8.8 [1628 kB] 241s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] 241s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 241s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libc6-dev armhf 2.40-1ubuntu3 [1370 kB] 241s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 241s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 241s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [9219 kB] 242s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-8ubuntu1 [1032 B] 242s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [5464 B] 242s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.1.0-2ubuntu1 [22.4 kB] 242s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 14.2.0-8ubuntu1 [43.3 kB] 242s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 14.2.0-8ubuntu1 [125 kB] 242s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 14.2.0-8ubuntu1 [2901 kB] 242s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 14.2.0-8ubuntu1 [1150 kB] 242s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-8ubuntu1 [897 kB] 242s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [18.0 MB] 243s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-8ubuntu1 [498 kB] 243s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [1222 B] 243s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.1.0-2ubuntu1 [5002 B] 243s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-8ubuntu1 [2569 kB] 243s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [10.5 MB] 244s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-8ubuntu1 [19.9 kB] 244s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [968 B] 244s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.1.0-2ubuntu1 [1084 B] 244s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 244s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 244s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.4.7-7build1 [166 kB] 244s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 244s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 244s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 244s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.0-1 [5058 B] 244s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-1 [46.5 kB] 244s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 244s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.22.5-2 [995 kB] 244s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 244s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 244s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.20ubuntu1 [893 kB] 244s Get:48 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20241024 [112 kB] 244s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 244s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 244s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libfontenc1 armhf 1:1.1.8-1build1 [11.5 kB] 244s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 244s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 244s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 244s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf xfonts-utils armhf 1:7.7+7 [90.6 kB] 244s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-urw-base35 all 20200910-8 [11.0 MB] 244s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] 244s Get:58 http://ftpmaster.internal/ubuntu plucky/universe armhf help2man armhf 1.49.3 [200 kB] 244s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 244s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] 244s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 244s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 244s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 244s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 244s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 244s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.22-1 [38.9 kB] 244s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 244s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 244s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.0.1-1 [463 kB] 244s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 244s Get:71 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] 244s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 244s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 244s Get:74 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 244s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB] 244s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB] 244s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.1-1build1 [12.4 kB] 244s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB] 244s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 244s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB] 244s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 244s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.4.0-0.1 [11.8 kB] 244s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.4.0-0.1 [22.5 kB] 244s Get:84 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 244s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 244s Get:86 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 245s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 245s Get:88 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.44.0-1 [54.2 kB] 245s Get:89 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 245s Get:90 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 245s Get:91 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20241024 [1728 B] 245s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB] 245s Get:93 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B] 245s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 245s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.0-2ubuntu1 [170 kB] 245s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 10.4.0-1ubuntu1 [428 kB] 245s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cairo armhf 1.26.1-2 [114 kB] 245s Get:98 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-freetype all 2.5.1-1 [92.3 kB] 245s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-rlpycairo all 0.3.0-3 [9130 B] 245s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-reportlab all 4.2.5-1 [1107 kB] 245s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB] 245s Get:102 http://ftpmaster.internal/ubuntu plucky/universe armhf w3c-sgml-lib all 1.3-3 [280 kB] 245s Get:103 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-biopython armhf 1.84+dfsg-4 [1666 kB] 245s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-freesasa armhf 2.1.0-3build3 [144 kB] 246s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-poetry-core all 1.9.0-2 [203 kB] 246s Get:106 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-prodigy all 2.2.3-1 [15.7 kB] 246s Fetched 86.2 MB in 7s (11.7 MB/s) 246s Selecting previously unselected package libpython3.13-minimal:armhf. 246s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59567 files and directories currently installed.) 246s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_armhf.deb ... 246s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ... 246s Selecting previously unselected package python3.13-minimal. 246s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_armhf.deb ... 246s Unpacking python3.13-minimal (3.13.0-2) ... 247s Selecting previously unselected package sgml-base. 247s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 247s Unpacking sgml-base (1.31) ... 247s Selecting previously unselected package m4. 247s Preparing to unpack .../003-m4_1.4.19-4build1_armhf.deb ... 247s Unpacking m4 (1.4.19-4build1) ... 247s Selecting previously unselected package autoconf. 247s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 247s Unpacking autoconf (2.72-3) ... 247s Selecting previously unselected package autotools-dev. 247s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 247s Unpacking autotools-dev (20220109.1) ... 247s Selecting previously unselected package automake. 247s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 247s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 247s Selecting previously unselected package autopoint. 247s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 247s Unpacking autopoint (0.22.5-2) ... 247s Selecting previously unselected package libc-dev-bin. 247s Preparing to unpack .../008-libc-dev-bin_2.40-1ubuntu3_armhf.deb ... 247s Unpacking libc-dev-bin (2.40-1ubuntu3) ... 247s Selecting previously unselected package linux-libc-dev:armhf. 247s Preparing to unpack .../009-linux-libc-dev_6.11.0-8.8_armhf.deb ... 247s Unpacking linux-libc-dev:armhf (6.11.0-8.8) ... 247s Selecting previously unselected package libcrypt-dev:armhf. 247s Preparing to unpack .../010-libcrypt-dev_1%3a4.4.36-4build1_armhf.deb ... 247s Unpacking libcrypt-dev:armhf (1:4.4.36-4build1) ... 247s Selecting previously unselected package rpcsvc-proto. 247s Preparing to unpack .../011-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 247s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 247s Selecting previously unselected package libc6-dev:armhf. 247s Preparing to unpack .../012-libc6-dev_2.40-1ubuntu3_armhf.deb ... 247s Unpacking libc6-dev:armhf (2.40-1ubuntu3) ... 247s Selecting previously unselected package libisl23:armhf. 247s Preparing to unpack .../013-libisl23_0.27-1_armhf.deb ... 247s Unpacking libisl23:armhf (0.27-1) ... 247s Selecting previously unselected package libmpc3:armhf. 247s Preparing to unpack .../014-libmpc3_1.3.1-1build2_armhf.deb ... 247s Unpacking libmpc3:armhf (1.3.1-1build2) ... 247s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 247s Preparing to unpack .../015-cpp-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 247s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package cpp-14. 248s Preparing to unpack .../016-cpp-14_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package cpp-arm-linux-gnueabihf. 248s Preparing to unpack .../017-cpp-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 248s Unpacking cpp-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 248s Selecting previously unselected package cpp. 248s Preparing to unpack .../018-cpp_4%3a14.1.0-2ubuntu1_armhf.deb ... 248s Unpacking cpp (4:14.1.0-2ubuntu1) ... 248s Selecting previously unselected package libcc1-0:armhf. 248s Preparing to unpack .../019-libcc1-0_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking libcc1-0:armhf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package libgomp1:armhf. 248s Preparing to unpack .../020-libgomp1_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking libgomp1:armhf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package libasan8:armhf. 248s Preparing to unpack .../021-libasan8_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking libasan8:armhf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package libubsan1:armhf. 248s Preparing to unpack .../022-libubsan1_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking libubsan1:armhf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package libgcc-14-dev:armhf. 248s Preparing to unpack .../023-libgcc-14-dev_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking libgcc-14-dev:armhf (14.2.0-8ubuntu1) ... 248s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 248s Preparing to unpack .../024-gcc-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 248s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 249s Selecting previously unselected package gcc-14. 249s Preparing to unpack .../025-gcc-14_14.2.0-8ubuntu1_armhf.deb ... 249s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 249s Selecting previously unselected package gcc-arm-linux-gnueabihf. 249s Preparing to unpack .../026-gcc-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 249s Unpacking gcc-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 249s Selecting previously unselected package gcc. 249s Preparing to unpack .../027-gcc_4%3a14.1.0-2ubuntu1_armhf.deb ... 249s Unpacking gcc (4:14.1.0-2ubuntu1) ... 249s Selecting previously unselected package libstdc++-14-dev:armhf. 249s Preparing to unpack .../028-libstdc++-14-dev_14.2.0-8ubuntu1_armhf.deb ... 249s Unpacking libstdc++-14-dev:armhf (14.2.0-8ubuntu1) ... 249s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 249s Preparing to unpack .../029-g++-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 249s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 249s Selecting previously unselected package g++-14. 249s Preparing to unpack .../030-g++-14_14.2.0-8ubuntu1_armhf.deb ... 249s Unpacking g++-14 (14.2.0-8ubuntu1) ... 249s Selecting previously unselected package g++-arm-linux-gnueabihf. 249s Preparing to unpack .../031-g++-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 249s Unpacking g++-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 249s Selecting previously unselected package g++. 249s Preparing to unpack .../032-g++_4%3a14.1.0-2ubuntu1_armhf.deb ... 249s Unpacking g++ (4:14.1.0-2ubuntu1) ... 250s Selecting previously unselected package build-essential. 250s Preparing to unpack .../033-build-essential_12.10ubuntu1_armhf.deb ... 250s Unpacking build-essential (12.10ubuntu1) ... 250s Selecting previously unselected package libdebhelper-perl. 250s Preparing to unpack .../034-libdebhelper-perl_13.20ubuntu1_all.deb ... 250s Unpacking libdebhelper-perl (13.20ubuntu1) ... 250s Selecting previously unselected package libtool. 250s Preparing to unpack .../035-libtool_2.4.7-7build1_all.deb ... 250s Unpacking libtool (2.4.7-7build1) ... 250s Selecting previously unselected package dh-autoreconf. 250s Preparing to unpack .../036-dh-autoreconf_20_all.deb ... 250s Unpacking dh-autoreconf (20) ... 250s Selecting previously unselected package libarchive-zip-perl. 250s Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ... 250s Unpacking libarchive-zip-perl (1.68-1) ... 250s Selecting previously unselected package libfile-stripnondeterminism-perl. 250s Preparing to unpack .../038-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 250s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 250s Selecting previously unselected package dh-strip-nondeterminism. 250s Preparing to unpack .../039-dh-strip-nondeterminism_1.14.0-1_all.deb ... 250s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 250s Selecting previously unselected package debugedit. 250s Preparing to unpack .../040-debugedit_1%3a5.1-1_armhf.deb ... 250s Unpacking debugedit (1:5.1-1) ... 250s Selecting previously unselected package dwz. 250s Preparing to unpack .../041-dwz_0.15-1build6_armhf.deb ... 250s Unpacking dwz (0.15-1build6) ... 250s Selecting previously unselected package gettext. 250s Preparing to unpack .../042-gettext_0.22.5-2_armhf.deb ... 250s Unpacking gettext (0.22.5-2) ... 250s Selecting previously unselected package intltool-debian. 250s Preparing to unpack .../043-intltool-debian_0.35.0+20060710.6_all.deb ... 250s Unpacking intltool-debian (0.35.0+20060710.6) ... 250s Selecting previously unselected package po-debconf. 250s Preparing to unpack .../044-po-debconf_1.0.21+nmu1_all.deb ... 250s Unpacking po-debconf (1.0.21+nmu1) ... 250s Selecting previously unselected package debhelper. 250s Preparing to unpack .../045-debhelper_13.20ubuntu1_all.deb ... 250s Unpacking debhelper (13.20ubuntu1) ... 250s Selecting previously unselected package dh-python. 250s Preparing to unpack .../046-dh-python_6.20241024_all.deb ... 250s Unpacking dh-python (6.20241024) ... 250s Selecting previously unselected package fonts-dejavu-mono. 250s Preparing to unpack .../047-fonts-dejavu-mono_2.37-8_all.deb ... 250s Unpacking fonts-dejavu-mono (2.37-8) ... 250s Selecting previously unselected package fonts-dejavu-core. 250s Preparing to unpack .../048-fonts-dejavu-core_2.37-8_all.deb ... 251s Unpacking fonts-dejavu-core (2.37-8) ... 251s Selecting previously unselected package libfontenc1:armhf. 251s Preparing to unpack .../049-libfontenc1_1%3a1.1.8-1build1_armhf.deb ... 251s Unpacking libfontenc1:armhf (1:1.1.8-1build1) ... 251s Selecting previously unselected package libfreetype6:armhf. 251s Preparing to unpack .../050-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 251s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 251s Selecting previously unselected package x11-common. 251s Preparing to unpack .../051-x11-common_1%3a7.7+23ubuntu3_all.deb ... 251s Unpacking x11-common (1:7.7+23ubuntu3) ... 251s Selecting previously unselected package xfonts-encodings. 251s Preparing to unpack .../052-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 251s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 251s Selecting previously unselected package xfonts-utils. 251s Preparing to unpack .../053-xfonts-utils_1%3a7.7+7_armhf.deb ... 251s Unpacking xfonts-utils (1:7.7+7) ... 251s Selecting previously unselected package fonts-urw-base35. 251s Preparing to unpack .../054-fonts-urw-base35_20200910-8_all.deb ... 251s Unpacking fonts-urw-base35 (20200910-8) ... 251s Selecting previously unselected package fontconfig-config. 251s Preparing to unpack .../055-fontconfig-config_2.15.0-1.1ubuntu2_armhf.deb ... 251s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 251s Selecting previously unselected package help2man. 251s Preparing to unpack .../056-help2man_1.49.3_armhf.deb ... 251s Unpacking help2man (1.49.3) ... 252s Selecting previously unselected package libblas3:armhf. 252s Preparing to unpack .../057-libblas3_3.12.0-3build2_armhf.deb ... 252s Unpacking libblas3:armhf (3.12.0-3build2) ... 252s Selecting previously unselected package libfontconfig1:armhf. 252s Preparing to unpack .../058-libfontconfig1_2.15.0-1.1ubuntu2_armhf.deb ... 252s Unpacking libfontconfig1:armhf (2.15.0-1.1ubuntu2) ... 252s Selecting previously unselected package libpixman-1-0:armhf. 252s Preparing to unpack .../059-libpixman-1-0_0.44.0-3_armhf.deb ... 252s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 252s Selecting previously unselected package libxcb-render0:armhf. 252s Preparing to unpack .../060-libxcb-render0_1.17.0-2_armhf.deb ... 252s Unpacking libxcb-render0:armhf (1.17.0-2) ... 252s Selecting previously unselected package libxcb-shm0:armhf. 252s Preparing to unpack .../061-libxcb-shm0_1.17.0-2_armhf.deb ... 252s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 252s Selecting previously unselected package libxrender1:armhf. 252s Preparing to unpack .../062-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 252s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 252s Selecting previously unselected package libcairo2:armhf. 252s Preparing to unpack .../063-libcairo2_1.18.2-2_armhf.deb ... 252s Unpacking libcairo2:armhf (1.18.2-2) ... 252s Selecting previously unselected package libdeflate0:armhf. 252s Preparing to unpack .../064-libdeflate0_1.22-1_armhf.deb ... 252s Unpacking libdeflate0:armhf (1.22-1) ... 252s Selecting previously unselected package libgfortran5:armhf. 252s Preparing to unpack .../065-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 252s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 252s Selecting previously unselected package libgraphite2-3:armhf. 252s Preparing to unpack .../066-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 252s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 252s Selecting previously unselected package libharfbuzz0b:armhf. 252s Preparing to unpack .../067-libharfbuzz0b_10.0.1-1_armhf.deb ... 252s Unpacking libharfbuzz0b:armhf (10.0.1-1) ... 252s Selecting previously unselected package libimagequant0:armhf. 252s Preparing to unpack .../068-libimagequant0_2.18.0-1build1_armhf.deb ... 252s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 252s Selecting previously unselected package libjpeg-turbo8:armhf. 252s Preparing to unpack .../069-libjpeg-turbo8_2.1.5-2ubuntu2_armhf.deb ... 252s Unpacking libjpeg-turbo8:armhf (2.1.5-2ubuntu2) ... 252s Selecting previously unselected package libjpeg8:armhf. 252s Preparing to unpack .../070-libjpeg8_8c-2ubuntu11_armhf.deb ... 252s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 252s Selecting previously unselected package liblapack3:armhf. 252s Preparing to unpack .../071-liblapack3_3.12.0-3build2_armhf.deb ... 252s Unpacking liblapack3:armhf (3.12.0-3build2) ... 252s Selecting previously unselected package liblcms2-2:armhf. 252s Preparing to unpack .../072-liblcms2-2_2.16-2_armhf.deb ... 252s Unpacking liblcms2-2:armhf (2.16-2) ... 252s Selecting previously unselected package liblerc4:armhf. 252s Preparing to unpack .../073-liblerc4_4.0.0+ds-4ubuntu2_armhf.deb ... 252s Unpacking liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 252s Selecting previously unselected package libpython3.13-stdlib:armhf. 252s Preparing to unpack .../074-libpython3.13-stdlib_3.13.0-2_armhf.deb ... 252s Unpacking libpython3.13-stdlib:armhf (3.13.0-2) ... 253s Selecting previously unselected package libraqm0:armhf. 253s Preparing to unpack .../075-libraqm0_0.10.1-1build1_armhf.deb ... 253s Unpacking libraqm0:armhf (0.10.1-1build1) ... 253s Selecting previously unselected package libsharpyuv0:armhf. 253s Preparing to unpack .../076-libsharpyuv0_1.4.0-0.1_armhf.deb ... 253s Unpacking libsharpyuv0:armhf (1.4.0-0.1) ... 253s Selecting previously unselected package libjbig0:armhf. 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debhelper (13.20ubuntu1) ... 269s Setting up pybuild-plugin-autopkgtest (6.20241024) ... 269s Processing triggers for libc-bin (2.40-1ubuntu3) ... 269s Processing triggers for systemd (256.5-2ubuntu4) ... 269s Processing triggers for man-db (2.12.1-3) ... 271s Processing triggers for install-info (7.1.1-1) ... 271s Processing triggers for sgml-base (1.31) ... 271s Setting up w3c-sgml-lib (1.3-3) ... 301s Setting up python3-biopython (1.84+dfsg-4) ... 304s Setting up python3-prodigy (2.2.3-1) ... 304s Setting up autopkgtest-satdep (0) ... 323s (Reading database ... 67844 files and directories currently installed.) 323s Removing autopkgtest-satdep (0) ... 329s autopkgtest [00:49:12]: test pybuild-autopkgtest: pybuild-autopkgtest 329s autopkgtest [00:49:12]: test pybuild-autopkgtest: [----------------------- 331s pybuild-autopkgtest 331s I: pybuild base:311: cd /tmp/autopkgtest.B7Yx5Y/autopkgtest_tmp/build; python3.13 -m unittest discover -v 331s tests.test_prodigy (unittest.loader._FailedTest.tests.test_prodigy) ... ERROR 331s 331s ====================================================================== 331s ERROR: tests.test_prodigy (unittest.loader._FailedTest.tests.test_prodigy) 331s ---------------------------------------------------------------------- 331s ImportError: Failed to import test module: tests.test_prodigy 331s Traceback (most recent call last): 331s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 24, in 331s from . import multiarray 331s File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in 331s from . import overrides 331s File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 8, in 331s from numpy.core._multiarray_umath import ( 331s add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) 331s ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 331s 331s During handling of the above exception, another exception occurred: 331s 331s Traceback (most recent call last): 331s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 130, in 331s from numpy.__config__ import show as show_config 331s File "/usr/lib/python3/dist-packages/numpy/__config__.py", line 4, in 331s from numpy.core._multiarray_umath import ( 331s ...<3 lines>... 331s ) 331s File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 50, in 331s raise ImportError(msg) 331s ImportError: 331s 331s IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 331s 331s Importing the numpy C-extensions failed. This error can happen for 331s many reasons, often due to issues with your setup or how NumPy was 331s installed. 331s 331s We have compiled some common reasons and troubleshooting tips at: 331s 331s https://numpy.org/devdocs/user/troubleshooting-importerror.html 331s 331s Please note and check the following: 331s 331s * The Python version is: Python3.13 from "/usr/bin/python3.13" 331s * The NumPy version is: "1.26.4" 331s 331s and make sure that they are the versions you expect. 331s Please carefully study the documentation linked above for further help. 331s 331s Original error was: No module named 'numpy.core._multiarray_umath' 331s 331s 331s The above exception was the direct cause of the following exception: 331s 331s Traceback (most recent call last): 331s File "/usr/lib/python3.13/unittest/loader.py", line 396, in _find_test_path 331s module = self._get_module_from_name(name) 331s File "/usr/lib/python3.13/unittest/loader.py", line 339, in _get_module_from_name 331s __import__(name) 331s ~~~~~~~~~~^^^^^^ 331s File "/tmp/autopkgtest.B7Yx5Y/autopkgtest_tmp/build/tests/test_prodigy.py", line 17, in 331s import numpy as np 331s File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 135, in 331s raise ImportError(msg) from e 331s ImportError: Error importing numpy: you should not try to import numpy from 331s its source directory; please exit the numpy source tree, and relaunch 331s your python interpreter from there. 331s 331s 331s ---------------------------------------------------------------------- 331s Ran 1 test in 0.000s 331s 331s FAILED (errors=1) 331s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.B7Yx5Y/autopkgtest_tmp/build; python3.13 -m unittest discover -v 331s I: pybuild base:311: cd /tmp/autopkgtest.B7Yx5Y/autopkgtest_tmp/build; python3.12 -m unittest discover -v 332s test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) 357s Test method to compare prediction for 80 dataset cases with ... Deltas: 357s ba_val max: 1.03% 357s ba_val mean: 0.29% 357s nis_a max: 0.53% 357s nis_a mean: 0.02% 357s nis_c max: 0.44% 357s nis_c mean: 0.02% 357s ok 357s 357s ---------------------------------------------------------------------- 357s Ran 1 test in 25.159s 357s 357s OK 357s pybuild-autopkgtest: error: pybuild --autopkgtest -i python{version} -p "3.13 3.12" returned exit code 13 357s make: *** [/tmp/t0LY5hUMPI/run:4: pybuild-autopkgtest] Error 25 357s pybuild-autopkgtest: error: /tmp/t0LY5hUMPI/run pybuild-autopkgtest returned exit code 2 357s autopkgtest [00:49:40]: test pybuild-autopkgtest: -----------------------] 361s autopkgtest [00:49:44]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 361s pybuild-autopkgtest FAIL non-zero exit status 25 365s autopkgtest [00:49:48]: @@@@@@@@@@@@@@@@@@@@ summary 365s pybuild-autopkgtest FAIL non-zero exit status 25