0s autopkgtest [20:06:06]: starting date and time: 2024-11-15 20:06:06+0000 1s autopkgtest [20:06:07]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 1s autopkgtest [20:06:07]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.96vxg704/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python-pomegranate --apt-upgrade python-pomegranate --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python-pomegranate/0.14.8-7 -- lxd -r lxd-armhf-10.145.243.229 lxd-armhf-10.145.243.229:autopkgtest/ubuntu/plucky/armhf 52s autopkgtest [20:06:58]: testbed dpkg architecture: armhf 54s autopkgtest [20:07:00]: testbed apt version: 2.9.8 54s autopkgtest [20:07:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 62s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 62s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [92.2 kB] 62s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1043 kB] 63s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 63s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 63s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [143 kB] 63s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [747 kB] 63s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [4428 B] 63s Fetched 2126 kB in 1s (2204 kB/s) 63s Reading package lists... 80s tee: /proc/self/fd/2: Permission denied 102s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 102s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 102s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 102s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 104s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 105s Calculating upgrade... 105s The following NEW packages will be installed: 105s libassuan9 105s The following packages will be upgraded: 105s libgpgme11t64 libseccomp2 python3-cffi-backend python3-markupsafe 105s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 105s Need to get 297 kB of archives. 105s After this operation, 224 kB of additional disk space will be used. 105s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libseccomp2 armhf 2.5.5-1ubuntu5 [49.3 kB] 106s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cffi-backend armhf 1.17.1-2build1 [75.9 kB] 106s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libassuan9 armhf 3.0.1-2 [34.3 kB] 106s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgpgme11t64 armhf 1.24.0-2ubuntu1 [125 kB] 106s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-markupsafe armhf 2.1.5-1build3 [12.5 kB] 106s Fetched 297 kB in 0s (616 kB/s) 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59566 files and directories currently installed.) 106s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu5_armhf.deb ... 106s Unpacking libseccomp2:armhf (2.5.5-1ubuntu5) over (2.5.5-1ubuntu4) ... 106s Setting up libseccomp2:armhf (2.5.5-1ubuntu5) ... 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59566 files and directories currently installed.) 106s Preparing to unpack .../python3-cffi-backend_1.17.1-2build1_armhf.deb ... 106s Unpacking python3-cffi-backend:armhf (1.17.1-2build1) over (1.17.1-2) ... 106s Selecting previously unselected package libassuan9:armhf. 106s Preparing to unpack .../libassuan9_3.0.1-2_armhf.deb ... 106s Unpacking libassuan9:armhf (3.0.1-2) ... 106s Preparing to unpack .../libgpgme11t64_1.24.0-2ubuntu1_armhf.deb ... 106s Unpacking libgpgme11t64:armhf (1.24.0-2ubuntu1) over (1.23.2-5ubuntu4) ... 106s Preparing to unpack .../python3-markupsafe_2.1.5-1build3_armhf.deb ... 107s Unpacking python3-markupsafe (2.1.5-1build3) over (2.1.5-1build2) ... 107s Setting up python3-markupsafe (2.1.5-1build3) ... 107s Setting up libassuan9:armhf (3.0.1-2) ... 107s Setting up libgpgme11t64:armhf (1.24.0-2ubuntu1) ... 107s Setting up python3-cffi-backend:armhf (1.17.1-2build1) ... 107s Processing triggers for libc-bin (2.40-1ubuntu3) ... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s autopkgtest [20:07:56]: rebooting testbed after setup commands that affected boot 176s autopkgtest [20:09:02]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 202s autopkgtest [20:09:28]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pomegranate 218s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (dsc) [2729 B] 218s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (tar) [27.3 MB] 218s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe python-pomegranate 0.14.8-7 (diff) [40.4 kB] 218s gpgv: Signature made Fri Nov 15 12:15:15 2024 UTC 218s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 218s gpgv: Can't check signature: No public key 218s dpkg-source: warning: cannot verify inline signature for ./python-pomegranate_0.14.8-7.dsc: no acceptable signature found 219s autopkgtest [20:09:45]: testing package python-pomegranate version 0.14.8-7 221s autopkgtest [20:09:47]: build not needed 224s autopkgtest [20:09:50]: test run-tests: preparing testbed 234s Reading package lists... 234s Building dependency tree... 234s Reading state information... 235s Starting pkgProblemResolver with broken count: 0 235s Starting 2 pkgProblemResolver with broken count: 0 235s Done 236s The following additional packages will be installed: 236s fonts-font-awesome fonts-lato libblas3 libgfortran5 libjs-jquery 236s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 236s python-pomegranate-doc python3-all python3-dateutil python3-decorator 236s python3-iniconfig python3-joblib python3-networkx python3-numpy 236s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 236s python3-pomegranate python3-pytest python3-scipy python3-six python3-tz 236s sphinx-rtd-theme-common 236s Suggested packages: 236s python-joblib-doc python3-gdal python3-matplotlib python3-pydot 236s python3-pygraphviz gcc gfortran python-numpy-doc python3-dev 236s python-pandas-doc python3-statsmodels python-scipy-doc 236s Recommended packages: 236s javascript-common python3-simplejson python3-psutil python3-matplotlib 236s python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-bs4 236s python3-html5lib python3-lxml python3-tables g++ | c++-compiler python3-pil 236s The following NEW packages will be installed: 236s autopkgtest-satdep fonts-font-awesome fonts-lato libblas3 libgfortran5 236s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 236s python-pomegranate-doc python3-all python3-dateutil python3-decorator 236s python3-iniconfig python3-joblib python3-networkx python3-numpy 236s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 236s python3-pomegranate python3-pytest python3-scipy python3-six python3-tz 236s sphinx-rtd-theme-common 236s 0 upgraded, 28 newly installed, 0 to remove and 0 not upgraded. 236s Need to get 56.6 MB/56.6 MB of archives. 236s After this operation, 268 MB of additional disk space will be used. 236s Get:1 /tmp/autopkgtest.xu5n2E/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [756 B] 236s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-lato all 2.015-1 [2781 kB] 237s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 237s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 237s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 237s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 237s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 237s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] 237s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 237s Get:10 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 237s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1012 kB] 237s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python-pomegranate-doc all 0.14.8-7 [5463 kB] 237s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.12.6-0ubuntu1 [886 B] 237s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf python3-six all 1.16.0-7 [13.1 kB] 237s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dateutil all 2.9.0-2 [80.3 kB] 237s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 237s Get:17 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 237s Get:18 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-joblib all 1.3.2-5 [206 kB] 237s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 237s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 238s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 238s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2024.1-2 [31.4 kB] 238s Get:23 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-5 [4728 kB] 238s Get:24 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-5 [3112 kB] 238s Get:25 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 238s Get:26 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.13.1-5 [16.4 MB] 238s Get:27 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python3-pomegranate armhf 0.14.8-7 [3748 kB] 238s Get:28 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 239s Fetched 56.6 MB in 3s (22.3 MB/s) 239s Selecting previously unselected package fonts-lato. 239s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59573 files and directories currently installed.) 239s Preparing to unpack .../00-fonts-lato_2.015-1_all.deb ... 239s Unpacking fonts-lato (2.015-1) ... 239s Selecting previously unselected package fonts-font-awesome. 239s Preparing to unpack .../01-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 239s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 239s Selecting previously unselected package libblas3:armhf. 239s Preparing to unpack .../02-libblas3_3.12.0-3build2_armhf.deb ... 239s Unpacking libblas3:armhf (3.12.0-3build2) ... 239s Selecting previously unselected package libgfortran5:armhf. 239s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 239s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 239s Selecting previously unselected package libjs-jquery. 239s Preparing to unpack .../04-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 239s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 239s Selecting previously unselected package libjs-underscore. 239s Preparing to unpack .../05-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 239s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 239s Selecting previously unselected package libjs-sphinxdoc. 239s Preparing to unpack .../06-libjs-sphinxdoc_7.4.7-4_all.deb ... 239s Unpacking libjs-sphinxdoc (7.4.7-4) ... 239s Selecting previously unselected package liblapack3:armhf. 239s Preparing to unpack .../07-liblapack3_3.12.0-3build2_armhf.deb ... 239s Unpacking liblapack3:armhf (3.12.0-3build2) ... 239s Selecting previously unselected package liblbfgsb0:armhf. 239s Preparing to unpack .../08-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 239s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 240s Selecting previously unselected package sphinx-rtd-theme-common. 240s Preparing to unpack .../09-sphinx-rtd-theme-common_3.0.1+dfsg-1_all.deb ... 240s Unpacking sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 240s Selecting previously unselected package python-pomegranate-doc. 240s Preparing to unpack .../10-python-pomegranate-doc_0.14.8-7_all.deb ... 240s Unpacking python-pomegranate-doc (0.14.8-7) ... 240s Selecting previously unselected package python3-all. 240s Preparing to unpack .../11-python3-all_3.12.6-0ubuntu1_armhf.deb ... 240s Unpacking python3-all (3.12.6-0ubuntu1) ... 240s Selecting previously unselected package python3-six. 240s Preparing to unpack .../12-python3-six_1.16.0-7_all.deb ... 240s Unpacking python3-six (1.16.0-7) ... 240s Selecting previously unselected package python3-dateutil. 240s Preparing to unpack .../13-python3-dateutil_2.9.0-2_all.deb ... 240s Unpacking python3-dateutil (2.9.0-2) ... 240s Selecting previously unselected package python3-decorator. 240s Preparing to unpack .../14-python3-decorator_5.1.1-5_all.deb ... 240s Unpacking python3-decorator (5.1.1-5) ... 240s Selecting previously unselected package python3-iniconfig. 240s Preparing to unpack .../15-python3-iniconfig_1.1.1-2_all.deb ... 240s Unpacking python3-iniconfig (1.1.1-2) ... 240s Selecting previously unselected package python3-joblib. 240s Preparing to unpack .../16-python3-joblib_1.3.2-5_all.deb ... 240s Unpacking python3-joblib (1.3.2-5) ... 240s Selecting previously unselected package python3-networkx. 240s Preparing to unpack .../17-python3-networkx_3.2.1-4ubuntu1_all.deb ... 240s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 241s Selecting previously unselected package python3-numpy. 241s Preparing to unpack .../18-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 241s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 241s Selecting previously unselected package python3-packaging. 241s Preparing to unpack .../19-python3-packaging_24.1-1_all.deb ... 241s Unpacking python3-packaging (24.1-1) ... 241s Selecting previously unselected package python3-tz. 241s Preparing to unpack .../20-python3-tz_2024.1-2_all.deb ... 241s Unpacking python3-tz (2024.1-2) ... 241s Selecting previously unselected package python3-pandas-lib:armhf. 241s Preparing to unpack .../21-python3-pandas-lib_2.2.3+dfsg-5_armhf.deb ... 241s Unpacking python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 241s Selecting previously unselected package python3-pandas. 241s Preparing to unpack .../22-python3-pandas_2.2.3+dfsg-5_all.deb ... 241s Unpacking python3-pandas (2.2.3+dfsg-5) ... 241s Selecting previously unselected package python3-pluggy. 241s Preparing to unpack .../23-python3-pluggy_1.5.0-1_all.deb ... 241s Unpacking python3-pluggy (1.5.0-1) ... 241s Selecting previously unselected package python3-scipy. 242s Preparing to unpack .../24-python3-scipy_1.13.1-5_armhf.deb ... 242s Unpacking python3-scipy (1.13.1-5) ... 242s Selecting previously unselected package python3-pomegranate. 242s Preparing to unpack .../25-python3-pomegranate_0.14.8-7_armhf.deb ... 242s Unpacking python3-pomegranate (0.14.8-7) ... 243s Selecting previously unselected package python3-pytest. 243s Preparing to unpack .../26-python3-pytest_8.3.3-1_all.deb ... 243s Unpacking python3-pytest (8.3.3-1) ... 243s Selecting previously unselected package autopkgtest-satdep. 243s Preparing to unpack .../27-1-autopkgtest-satdep.deb ... 243s Unpacking autopkgtest-satdep (0) ... 243s Setting up python3-iniconfig (1.1.1-2) ... 243s Setting up fonts-lato (2.015-1) ... 243s Setting up python3-joblib (1.3.2-5) ... 243s Setting up python3-all (3.12.6-0ubuntu1) ... 243s Setting up python3-networkx (3.2.1-4ubuntu1) ... 245s Setting up python3-tz (2024.1-2) ... 245s Setting up python3-six (1.16.0-7) ... 245s Setting up python3-decorator (5.1.1-5) ... 246s Setting up libblas3:armhf (3.12.0-3build2) ... 246s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 246s Setting up python3-packaging (24.1-1) ... 246s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 246s Setting up python3-pluggy (1.5.0-1) ... 246s Setting up python3-dateutil (2.9.0-2) ... 246s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 246s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 246s Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... 246s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 246s Setting up liblapack3:armhf (3.12.0-3build2) ... 246s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 246s Setting up python3-pytest (8.3.3-1) ... 247s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 249s Setting up libjs-sphinxdoc (7.4.7-4) ... 249s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 249s Setting up python3-scipy (1.13.1-5) ... 253s Setting up python3-pomegranate (0.14.8-7) ... 253s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 253s Setting up python-pomegranate-doc (0.14.8-7) ... 253s Setting up python3-pandas (2.2.3+dfsg-5) ... 259s Setting up autopkgtest-satdep (0) ... 259s Processing triggers for man-db (2.13.0-1) ... 260s Processing triggers for libc-bin (2.40-1ubuntu3) ... 275s (Reading database ... 67535 files and directories currently installed.) 276s Removing autopkgtest-satdep (0) ... 281s autopkgtest [20:10:47]: test run-tests: [----------------------- 284s ============================= test session starts ============================== 284s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 284s cachedir: .pytest_cache 284s rootdir: /tmp/autopkgtest.xu5n2E/autopkgtest_tmp 284s plugins: typeguard-4.4.1 286s collecting ... collected 598 items 286s 286s tests/test_bayes_classifier.py::test_unpickle_bayes_model PASSED [ 0%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_initialization PASSED [ 0%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_initialization PASSED [ 0%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_predict_log_proba PASSED [ 0%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_predict_log_proba PASSED [ 0%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_nan_predict_log_proba PASSED [ 1%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_mixed_nan_predict_log_proba PASSED [ 1%] 286s tests/test_bayes_classifier.py::test_bc_multivariate_gaussian_predict_log_proba_parallel PASSED [ 1%] 286s 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tests/test_hmm.py::test_hmm_univariate_poisson_dense_nan_predict PASSED [ 59%] 297s tests/test_hmm.py::test_hmm_multivariate_mixed_dense_nan_predict PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_multivariate_gaussian_dense_nan_predict PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_univariate_discrete_dense_predict_viterbi PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_univariate_gaussian_dense_predict_viterbi PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_univariate_poisson_dense_predict_viterbi PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_multivariate_mixed_dense_predict_viterbi PASSED [ 60%] 297s tests/test_hmm.py::test_hmm_multivariate_gaussian_dense_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_univariate_discrete_dense_nan_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_univariate_gaussian_dense_nan_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_univariate_poisson_dense_nan_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_multivariate_mixed_dense_nan_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_multivariate_gaussian_dense_nan_predict_viterbi PASSED [ 61%] 297s tests/test_hmm.py::test_hmm_viterbi_fit PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_no_pseudocount PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_w_pseudocount PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_w_pseudocount_priors PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_w_inertia PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_w_inertia2 PASSED [ 62%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_w_pseudocount_inertia PASSED [ 63%] 297s tests/test_hmm.py::test_hmm_viterbi_fit_one_check_input PASSED [ 63%] 297s tests/test_hmm.py::test_hmm_bw_fit PASSED [ 63%] 297s tests/test_hmm.py::test_hmm_bw_multivariate_discrete_fit PASSED [ 63%] 297s tests/test_hmm.py::test_hmm_bw_multivariate_discrete_fit_json_yaml PASSED [ 63%] 297s 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298s tests/test_hmm.py::test_hmm_bw_fit_one_check_input PASSED [ 68%] 298s tests/test_hmm.py::test_hmm_initialization PASSED [ 68%] 298s tests/test_hmm.py::test_hmm_univariate_initialization PASSED [ 68%] 298s tests/test_hmm.py::test_hmm_multivariate_initialization PASSED [ 68%] 298s tests/test_hmm.py::test_hmm_initialization_error PASSED [ 68%] 298s tests/test_hmm.py::test_hmm_pickle_univariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_json_univariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_robust_from_json_univariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_pickle_multivariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_json_multivariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_robust_from_json_multivariate PASSED [ 69%] 298s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples PASSED [ 70%] 298s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_with_labels PASSED [ 70%] 298s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_one_check_input PASSED [ 70%] 298s tests/test_hmm.py::test_hmm_univariate_gaussian_from_samples PASSED [ 70%] 298s tests/test_hmm.py::test_hmm_multivariate_gaussian_from_samples PASSED [ 70%] 299s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_end_state PASSED [ 70%] 299s tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_no_end_state PASSED [ 71%] 299s tests/test_hmm.py::test_hmm_json_general_mixture_gaussian PASSED [ 71%] 299s tests/test_hmm.py::test_hmm_robust_from_json_general_mixture_gaussian PASSED [ 71%] 299s tests/test_hmm.py::test_io_fit PASSED [ 71%] 299s tests/test_hmm.py::test_io_from_samples_hmm PASSED [ 71%] 299s tests/test_io.py::test_io_datagenerator_shape PASSED [ 71%] 299s tests/test_io.py::test_io_datagenerator_classes_fail PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_classes PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_x_batches PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_w_batches PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_y_batches PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_wy_batches PASSED [ 72%] 299s tests/test_io.py::test_io_datagenerator_wy_unlabeled PASSED [ 73%] 299s tests/test_io.py::test_io_datagenerator_wy_labeled PASSED [ 73%] 299s tests/test_io.py::test_io_seqgenerator_uni_shape PASSED [ 73%] 299s tests/test_io.py::test_io_seqgenerator_symbol_shape PASSED [ 73%] 299s tests/test_io.py::test_io_seqgenerator_shape PASSED [ 73%] 299s tests/test_io.py::test_io_seqgenerator_x_batches PASSED [ 73%] 299s tests/test_io.py::test_io_seqgenerator_x_symbol_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_w_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_w_symbol_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_y_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_y_symbol_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_wy_batches PASSED [ 74%] 299s tests/test_io.py::test_io_seqgenerator_wy_symbol_batches PASSED [ 75%] 299s tests/test_io.py::test_io_seqgenerator_wy_unlabeled PASSED [ 75%] 300s tests/test_io.py::test_io_seqgenerator_wy_symbol_unlabeled PASSED [ 75%] 300s tests/test_io.py::test_io_seqgenerator_wy_labeled PASSED [ 75%] 300s tests/test_io.py::test_io_seqgenerator_wy_symbol_labeled PASSED [ 75%] 300s tests/test_io.py::test_io_dfgenerator_shape PASSED [ 75%] 300s tests/test_io.py::test_io_dfgenerator_classes_fail PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_numpy_classes PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_pandas_classes PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_str_classes PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_x_batches PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_w_batches PASSED [ 76%] 300s tests/test_io.py::test_io_dfgenerator_w_str_batches PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_y_batches PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_y_str_batches PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_wy_batches PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_wy_str_batches PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_wy_unlabeled PASSED [ 77%] 300s tests/test_io.py::test_io_dfgenerator_wy_str_unlabeled PASSED [ 78%] 300s tests/test_io.py::test_io_dfgenerator_wy_labeled PASSED [ 78%] 300s tests/test_io.py::test_io_dfgenerator_wy_str_labeled PASSED [ 78%] 300s tests/test_kmeans.py::test_kmeans_init PASSED [ 78%] 300s tests/test_kmeans.py::test_kmeans_from_samples PASSED [ 78%] 300s tests/test_kmeans.py::test_kmeans_from_samples_parallel PASSED [ 78%] 300s tests/test_kmeans.py::test_kmeans_predict PASSED [ 79%] 300s tests/test_kmeans.py::test_kmeans_predict_parallel PASSED [ 79%] 300s tests/test_kmeans.py::test_kmeans_predict_large PASSED [ 79%] 300s tests/test_kmeans.py::test_kmeans_predict_large_parallel PASSED [ 79%] 300s tests/test_kmeans.py::test_kmeans_fit PASSED [ 79%] 301s tests/test_kmeans.py::test_kmeans_fit_parallel PASSED [ 79%] 301s tests/test_kmeans.py::test_kmeans_multiple_init PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_ooc_from_samples PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_ooc_fit PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_minibatch_from_samples PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_minibatch_fit PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_nan_from_samples PASSED [ 80%] 301s tests/test_kmeans.py::test_kmeans_nan_from_samples_parallel PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_fit PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_fit_parallel PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_fit_large PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_fit_large_parallel PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_predict PASSED [ 81%] 301s tests/test_kmeans.py::test_kmeans_nan_predict_parallel PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_nan_large_predict PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_nan_large_predict_parallel PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_nan_multiple_init PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_ooc_nan_from_samples PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_ooc_nan_fit PASSED [ 82%] 301s tests/test_kmeans.py::test_kmeans_minibatch_nan_from_samples PASSED [ 83%] 301s tests/test_kmeans.py::test_kmeans_minibatch_nan_fit PASSED [ 83%] 301s tests/test_markov_chain.py::test_zeroth_dist PASSED [ 83%] 301s tests/test_markov_chain.py::test_first_dist PASSED [ 83%] 301s tests/test_markov_chain.py::test_second_dist PASSED [ 83%] 301s tests/test_markov_chain.py::test_constructors PASSED [ 83%] 301s tests/test_markov_chain.py::test_first_log_probability PASSED [ 84%] 301s 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tests/test_markov_network.py::test_log_probability_str PASSED [ 86%] 302s tests/test_markov_network.py::test_log_probability_bool PASSED [ 86%] 302s tests/test_markov_network.py::test_log_probability_mixed PASSED [ 86%] 302s tests/test_markov_network.py::test_log_probability_unnormalized_int PASSED [ 87%] 302s tests/test_markov_network.py::test_log_probability_unnormalized_str PASSED [ 87%] 302s tests/test_markov_network.py::test_log_probability_unnormalized_bool PASSED [ 87%] 302s tests/test_markov_network.py::test_log_probability_unnormalized_mixed PASSED [ 87%] 302s tests/test_markov_network.py::test_predict_int PASSED [ 87%] 302s tests/test_markov_network.py::test_predict_str PASSED [ 87%] 302s tests/test_markov_network.py::test_predict_bool PASSED [ 88%] 302s tests/test_markov_network.py::test_predict_mixed PASSED [ 88%] 302s tests/test_naive_bayes.py::test_nb_univariate_initialization PASSED [ 88%] 302s tests/test_naive_bayes.py::test_nb_multivariate_initialization PASSED [ 88%] 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tests/test_naive_bayes.py::test_io_log_probability PASSED [ 96%] 302s tests/test_naive_bayes.py::test_io_predict PASSED [ 96%] 302s tests/test_naive_bayes.py::test_io_predict_proba PASSED [ 96%] 302s tests/test_naive_bayes.py::test_io_predict_log_proba PASSED [ 96%] 302s tests/test_naive_bayes.py::test_io_fit PASSED [ 97%] 302s tests/test_naive_bayes.py::test_io_from_samples PASSED [ 97%] 302s tests/test_naive_bayes.py::test_discrete_distribution PASSED [ 97%] 302s tests/test_naive_bayes.py::test_bernoulli_discrete_distribution PASSED [ 97%] 302s tests/test_profile_hmm.py::test_same_length_viterbi PASSED [ 97%] 302s tests/test_profile_hmm.py::test_variable_length_viterbi PASSED [ 97%] 302s tests/test_profile_hmm.py::test_log_probability PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_transitions PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_transitions_w_training PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_transitions_w_vtraining PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_transitions_w_tied_training PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_transitions_w_tied_vtraining PASSED [ 98%] 302s tests/test_profile_hmm.py::test_posterior_emissions PASSED [ 99%] 302s tests/test_profile_hmm.py::test_posterior_emissions_w_multitransition_setup PASSED [ 99%] 302s tests/test_profile_hmm.py::test_posterior_emissions_w_tied_edge_setup PASSED [ 99%] 302s tests/test_profile_hmm.py::test_properties PASSED [ 99%] 302s tests/test_profile_hmm.py::test_to_json PASSED [ 99%] 302s tests/test_profile_hmm.py::test_from_json PASSED [100%] 302s 302s =============================== warnings summary =============================== 302s tests/test_custom_distributions.py: 29600 warnings 302s tests/test_hmm.py: 375 warnings 302s /usr/lib/python3/dist-packages/joblib/parallel.py:1792: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s res = func(*args, **kwargs) 302s 302s tests/test_custom_distributions.py: 40 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:223: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 400 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:232: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:345: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:359: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:373: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:387: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:402: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 2000 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:411: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 40 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:493: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 400 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:504: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:620: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:634: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:648: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:662: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 302s 302s tests/test_custom_distributions.py: 200 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:679: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 2000 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:690: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 10 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:700: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 30 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:705: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_equal(model1.predict(X), model2.predict(X)) 302s 302s tests/test_custom_distributions.py: 30 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:710: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 302s 302s tests/test_custom_distributions.py: 30 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:715: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 302s 302s tests/test_custom_distributions.py: 10 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:724: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 302s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 302s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 302s tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:733: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 50 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:787: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 150 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:792: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict(X), model2.predict(X)) 302s 302s tests/test_custom_distributions.py: 150 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:797: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_proba(X), model2.predict_proba(X)) 302s 302s tests/test_custom_distributions.py: 150 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:802: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.predict_log_proba(X), model2.predict_log_proba(X)) 302s 302s tests/test_custom_distributions.py: 30 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:811: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s tests/test_custom_distributions.py: 20 warnings 302s /tmp/autopkgtest.xu5n2E/autopkgtest_tmp/tests/test_custom_distributions.py:820: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 302s assert_array_almost_equal(model1.log_probability(X), model2.log_probability(X)) 302s 302s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 302s ===================== 598 passed, 37519 warnings in 18.46s ===================== 303s autopkgtest [20:11:09]: test run-tests: -----------------------] 307s autopkgtest [20:11:13]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 307s run-tests PASS 311s autopkgtest [20:11:17]: test autodep8-python3: preparing testbed 368s autopkgtest [20:12:14]: testbed dpkg architecture: armhf 370s autopkgtest [20:12:16]: testbed apt version: 2.9.8 370s autopkgtest [20:12:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 378s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 378s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 378s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.5 kB] 378s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [1043 kB] 378s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [92.2 kB] 378s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [143 kB] 378s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [747 kB] 379s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [4428 B] 379s Fetched 2126 kB in 1s (2093 kB/s) 379s Reading package lists... 394s tee: /proc/self/fd/2: Permission denied 416s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 416s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 416s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 416s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 418s Reading package lists... 418s Reading package lists... 418s Building dependency tree... 418s Reading state information... 419s Calculating upgrade... 419s The following NEW packages will be installed: 419s libassuan9 419s The following packages will be upgraded: 419s libgpgme11t64 libseccomp2 python3-cffi-backend python3-markupsafe 419s 4 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 419s Need to get 297 kB of archives. 419s After this operation, 224 kB of additional disk space will be used. 419s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libseccomp2 armhf 2.5.5-1ubuntu5 [49.3 kB] 420s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf python3-cffi-backend armhf 1.17.1-2build1 [75.9 kB] 420s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libassuan9 armhf 3.0.1-2 [34.3 kB] 420s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgpgme11t64 armhf 1.24.0-2ubuntu1 [125 kB] 420s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-markupsafe armhf 2.1.5-1build3 [12.5 kB] 420s Fetched 297 kB in 0s (629 kB/s) 420s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59566 files and directories currently installed.) 420s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu5_armhf.deb ... 420s Unpacking libseccomp2:armhf (2.5.5-1ubuntu5) over (2.5.5-1ubuntu4) ... 420s Setting up libseccomp2:armhf (2.5.5-1ubuntu5) ... 420s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59566 files and directories currently installed.) 420s Preparing to unpack .../python3-cffi-backend_1.17.1-2build1_armhf.deb ... 420s Unpacking python3-cffi-backend:armhf (1.17.1-2build1) over (1.17.1-2) ... 420s Selecting previously unselected package libassuan9:armhf. 420s Preparing to unpack .../libassuan9_3.0.1-2_armhf.deb ... 420s Unpacking libassuan9:armhf (3.0.1-2) ... 421s Preparing to unpack .../libgpgme11t64_1.24.0-2ubuntu1_armhf.deb ... 421s Unpacking libgpgme11t64:armhf (1.24.0-2ubuntu1) over (1.23.2-5ubuntu4) ... 421s Preparing to unpack .../python3-markupsafe_2.1.5-1build3_armhf.deb ... 421s Unpacking python3-markupsafe (2.1.5-1build3) over (2.1.5-1build2) ... 421s Setting up python3-markupsafe (2.1.5-1build3) ... 421s Setting up libassuan9:armhf (3.0.1-2) ... 421s Setting up libgpgme11t64:armhf (1.24.0-2ubuntu1) ... 421s Setting up python3-cffi-backend:armhf (1.17.1-2build1) ... 421s Processing triggers for libc-bin (2.40-1ubuntu3) ... 421s Reading package lists... 422s Building dependency tree... 422s Reading state information... 422s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 424s autopkgtest [20:13:10]: rebooting testbed after setup commands that affected boot 526s Reading package lists... 526s Building dependency tree... 526s Reading state information... 526s Starting pkgProblemResolver with broken count: 0 526s Starting 2 pkgProblemResolver with broken count: 0 526s Done 527s The following additional packages will be installed: 527s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 527s python3-joblib python3-networkx python3-numpy python3-pomegranate 527s python3-scipy 527s Suggested packages: 527s python-joblib-doc python3-gdal python3-matplotlib python3-pydot 527s python3-pygraphviz gcc gfortran python-numpy-doc python3-dev python3-pytest 527s python-pomegranate-doc python-scipy-doc 527s Recommended packages: 527s python3-pytest python3-simplejson python3-psutil g++ | c++-compiler 527s python3-pil 527s The following NEW packages will be installed: 527s autopkgtest-satdep libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all 527s python3-decorator python3-joblib python3-networkx python3-numpy 527s python3-pomegranate python3-scipy 527s 0 upgraded, 12 newly installed, 0 to remove and 0 not upgraded. 527s Need to get 38.0 MB/38.0 MB of archives. 527s After this operation, 206 MB of additional disk space will be used. 527s Get:1 /tmp/autopkgtest.xu5n2E/2-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [716 B] 528s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 528s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 528s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 528s Get:5 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 528s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.12.6-0ubuntu1 [886 B] 528s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 528s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-joblib all 1.3.2-5 [206 kB] 528s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 528s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 529s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.13.1-5 [16.4 MB] 529s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python3-pomegranate armhf 0.14.8-7 [3748 kB] 529s Fetched 38.0 MB in 2s (24.1 MB/s) 529s Selecting previously unselected package libblas3:armhf. 529s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59573 files and directories currently installed.) 529s Preparing to unpack .../00-libblas3_3.12.0-3build2_armhf.deb ... 530s Unpacking libblas3:armhf (3.12.0-3build2) ... 530s Selecting previously unselected package libgfortran5:armhf. 530s Preparing to unpack .../01-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 530s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 530s Selecting previously unselected package liblapack3:armhf. 530s Preparing to unpack .../02-liblapack3_3.12.0-3build2_armhf.deb ... 530s Unpacking liblapack3:armhf (3.12.0-3build2) ... 530s Selecting previously unselected package liblbfgsb0:armhf. 530s Preparing to unpack .../03-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 530s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 530s Selecting previously unselected package python3-all. 530s Preparing to unpack .../04-python3-all_3.12.6-0ubuntu1_armhf.deb ... 530s Unpacking python3-all (3.12.6-0ubuntu1) ... 530s Selecting previously unselected package python3-decorator. 530s Preparing to unpack .../05-python3-decorator_5.1.1-5_all.deb ... 530s Unpacking python3-decorator (5.1.1-5) ... 530s Selecting previously unselected package python3-joblib. 530s Preparing to unpack .../06-python3-joblib_1.3.2-5_all.deb ... 530s Unpacking python3-joblib (1.3.2-5) ... 530s Selecting previously unselected package python3-networkx. 530s Preparing to unpack .../07-python3-networkx_3.2.1-4ubuntu1_all.deb ... 530s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 531s Selecting previously unselected package python3-numpy. 531s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 531s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 531s Selecting previously unselected package python3-scipy. 531s Preparing to unpack .../09-python3-scipy_1.13.1-5_armhf.deb ... 531s Unpacking python3-scipy (1.13.1-5) ... 532s Selecting previously unselected package python3-pomegranate. 532s Preparing to unpack .../10-python3-pomegranate_0.14.8-7_armhf.deb ... 532s Unpacking python3-pomegranate (0.14.8-7) ... 532s Selecting previously unselected package autopkgtest-satdep. 532s Preparing to unpack .../11-2-autopkgtest-satdep.deb ... 532s Unpacking autopkgtest-satdep (0) ... 532s Setting up python3-joblib (1.3.2-5) ... 532s Setting up python3-all (3.12.6-0ubuntu1) ... 532s Setting up python3-networkx (3.2.1-4ubuntu1) ... 534s Setting up python3-decorator (5.1.1-5) ... 534s Setting up libblas3:armhf (3.12.0-3build2) ... 534s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 534s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 534s Setting up liblapack3:armhf (3.12.0-3build2) ... 534s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 534s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 536s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 536s Setting up python3-scipy (1.13.1-5) ... 540s Setting up python3-pomegranate (0.14.8-7) ... 541s Setting up autopkgtest-satdep (0) ... 541s Processing triggers for man-db (2.13.0-1) ... 541s Processing triggers for libc-bin (2.40-1ubuntu3) ... 553s (Reading database ... 65279 files and directories currently installed.) 553s Removing autopkgtest-satdep (0) ... 566s autopkgtest [20:15:32]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import pomegranate; print(pomegranate)" ; done 566s autopkgtest [20:15:32]: test autodep8-python3: [----------------------- 568s Testing with python3.12: 569s 569s autopkgtest [20:15:35]: test autodep8-python3: -----------------------] 574s autopkgtest [20:15:40]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 574s autodep8-python3 PASS (superficial) 578s autopkgtest [20:15:44]: @@@@@@@@@@@@@@@@@@@@ summary 578s run-tests PASS 578s autodep8-python3 PASS (superficial)