0s autopkgtest [16:33:24]: starting date and time: 2024-11-18 16:33:24+0000 0s autopkgtest [16:33:24]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [16:33:24]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.u0mo06kc/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:h5py,src:sphinx-rtd-theme --apt-upgrade python-h5netcdf --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=h5py/3.11.0-8ubuntu1 sphinx-rtd-theme/3.0.2+dfsg-1' -- lxd -r lxd-armhf-10.145.243.232 lxd-armhf-10.145.243.232:autopkgtest/ubuntu/plucky/armhf 56s autopkgtest [16:34:20]: testbed dpkg architecture: armhf 59s autopkgtest [16:34:23]: testbed apt version: 2.9.8 59s autopkgtest [16:34:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup 68s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 68s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [71.7 kB] 68s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 68s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [814 kB] 69s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [13.5 kB] 69s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [79.6 kB] 69s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [584 kB] 69s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3240 B] 69s Fetched 1647 kB in 1s (1606 kB/s) 69s Reading package lists... 87s tee: /proc/self/fd/2: Permission denied 111s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 111s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 113s Reading package lists... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s Calculating upgrade... 114s The following NEW packages will be installed: 114s liblsof0 114s The following packages will be upgraded: 114s lsof 115s 1 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 115s Need to get 300 kB of archives. 115s After this operation, 171 kB of additional disk space will be used. 115s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf liblsof0 armhf 4.99.3+dfsg-2 [60.5 kB] 115s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf lsof armhf 4.99.3+dfsg-2 [239 kB] 115s Fetched 300 kB in 1s (537 kB/s) 115s Selecting previously unselected package liblsof0. 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59581 files and directories currently installed.) 115s Preparing to unpack .../liblsof0_4.99.3+dfsg-2_armhf.deb ... 115s Unpacking liblsof0 (4.99.3+dfsg-2) ... 116s Preparing to unpack .../lsof_4.99.3+dfsg-2_armhf.deb ... 116s Unpacking lsof (4.99.3+dfsg-2) over (4.95.0-1.1) ... 116s Setting up liblsof0 (4.99.3+dfsg-2) ... 116s Setting up lsof (4.99.3+dfsg-2) ... 116s Processing triggers for man-db (2.13.0-1) ... 116s Processing triggers for libc-bin (2.40-1ubuntu3) ... 116s Reading package lists... 117s Building dependency tree... 117s Reading state information... 118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 120s autopkgtest [16:35:24]: rebooting testbed after setup commands that affected boot 189s autopkgtest [16:36:33]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 220s autopkgtest [16:37:04]: @@@@@@@@@@@@@@@@@@@@ apt-source python-h5netcdf 236s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-h5netcdf 1.4.0-3 (dsc) [2388 B] 236s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-h5netcdf 1.4.0-3 (tar) [64.6 kB] 236s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-h5netcdf 1.4.0-3 (diff) [6016 B] 236s gpgv: Signature made Tue Nov 12 23:12:03 2024 UTC 236s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 236s gpgv: Can't check signature: No public key 236s dpkg-source: warning: cannot verify inline signature for ./python-h5netcdf_1.4.0-3.dsc: no acceptable signature found 236s autopkgtest [16:37:20]: testing package python-h5netcdf version 1.4.0-3 239s autopkgtest [16:37:23]: build not needed 241s autopkgtest [16:37:25]: test command1: preparing testbed 257s Reading package lists... 258s Building dependency tree... 258s Reading state information... 258s Starting pkgProblemResolver with broken count: 0 258s Starting 2 pkgProblemResolver with broken count: 0 258s Done 259s The following additional packages will be installed: 259s libaec0 libblas3 libgfortran5 libhdf5-103-1t64 libhdf5-hl-100t64 259s libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblzf1 259s libnetcdf19t64 libsz2 python-h5netcdf-doc python3-all python3-cftime 259s python3-h5netcdf python3-h5py python3-h5py-serial python3-iniconfig 259s python3-netcdf4 python3-numpy python3-packaging python3-pluggy 259s python3-pytest 259s Suggested packages: 259s python-h5py-doc gcc gfortran python-numpy-doc python3-dev 259s Recommended packages: 259s javascript-common 259s The following NEW packages will be installed: 259s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1t64 259s libhdf5-hl-100t64 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 259s liblzf1 libnetcdf19t64 libsz2 python-h5netcdf-doc python3-all python3-cftime 259s python3-h5netcdf python3-h5py python3-h5py-serial python3-iniconfig 259s python3-netcdf4 python3-numpy python3-packaging python3-pluggy 259s python3-pytest 259s 0 upgraded, 25 newly installed, 0 to remove and 0 not upgraded. 259s Need to get 12.0 MB/12.0 MB of archives. 259s After this operation, 45.4 MB of additional disk space will be used. 259s Get:1 /tmp/autopkgtest.vi5Jqk/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [732 B] 259s Get:2 http://ftpmaster.internal/ubuntu plucky/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 259s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 259s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 259s Get:5 http://ftpmaster.internal/ubuntu plucky/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 259s Get:6 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-103-1t64 armhf 1.10.10+repack-4ubuntu3 [1327 kB] 260s Get:7 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-hl-100t64 armhf 1.10.10+repack-4ubuntu3 [55.9 kB] 260s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 260s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 260s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] 260s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 260s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf liblzf1 armhf 3.6-4 [6554 B] 260s Get:13 http://ftpmaster.internal/ubuntu plucky/universe armhf libnetcdf19t64 armhf 1:4.9.2-6ubuntu1 [419 kB] 260s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python-h5netcdf-doc all 1.4.0-3 [52.8 kB] 260s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.12.6-0ubuntu1 [886 B] 260s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11ubuntu1 [3975 kB] 260s Get:17 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cftime armhf 1.6.4-1build1 [304 kB] 260s Get:18 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python3-h5py-serial armhf 3.11.0-8ubuntu1 [1474 kB] 260s Get:19 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf python3-h5py all 3.11.0-8ubuntu1 [7982 B] 260s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.2-1 [51.5 kB] 260s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5netcdf all 1.4.0-3 [47.2 kB] 260s Get:22 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 260s Get:23 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-netcdf4 armhf 1.7.2-1build1 [849 kB] 260s Get:24 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 260s Get:25 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 261s Fetched 12.0 MB in 2s (7738 kB/s) 261s Selecting previously unselected package libaec0:armhf. 261s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59586 files and directories currently installed.) 261s Preparing to unpack .../00-libaec0_1.1.3-1_armhf.deb ... 261s Unpacking libaec0:armhf (1.1.3-1) ... 261s Selecting previously unselected package libblas3:armhf. 261s Preparing to unpack .../01-libblas3_3.12.0-3build2_armhf.deb ... 261s Unpacking libblas3:armhf (3.12.0-3build2) ... 261s Selecting previously unselected package libgfortran5:armhf. 261s Preparing to unpack .../02-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 261s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 261s Selecting previously unselected package libsz2:armhf. 261s Preparing to unpack .../03-libsz2_1.1.3-1_armhf.deb ... 261s Unpacking libsz2:armhf (1.1.3-1) ... 261s Selecting previously unselected package libhdf5-103-1t64:armhf. 261s Preparing to unpack .../04-libhdf5-103-1t64_1.10.10+repack-4ubuntu3_armhf.deb ... 261s Unpacking libhdf5-103-1t64:armhf (1.10.10+repack-4ubuntu3) ... 261s Selecting previously unselected package libhdf5-hl-100t64:armhf. 261s Preparing to unpack .../05-libhdf5-hl-100t64_1.10.10+repack-4ubuntu3_armhf.deb ... 261s Unpacking libhdf5-hl-100t64:armhf (1.10.10+repack-4ubuntu3) ... 261s Selecting previously unselected package libjs-jquery. 261s Preparing to unpack .../06-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 261s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 261s Selecting previously unselected package libjs-underscore. 261s Preparing to unpack .../07-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 261s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 261s Selecting previously unselected package libjs-sphinxdoc. 261s Preparing to unpack .../08-libjs-sphinxdoc_7.4.7-4_all.deb ... 261s Unpacking libjs-sphinxdoc (7.4.7-4) ... 261s Selecting previously unselected package liblapack3:armhf. 261s Preparing to unpack .../09-liblapack3_3.12.0-3build2_armhf.deb ... 261s Unpacking liblapack3:armhf (3.12.0-3build2) ... 261s Selecting previously unselected package liblzf1:armhf. 261s Preparing to unpack .../10-liblzf1_3.6-4_armhf.deb ... 261s Unpacking liblzf1:armhf (3.6-4) ... 261s Selecting previously unselected package libnetcdf19t64:armhf. 261s Preparing to unpack .../11-libnetcdf19t64_1%3a4.9.2-6ubuntu1_armhf.deb ... 261s Unpacking libnetcdf19t64:armhf (1:4.9.2-6ubuntu1) ... 261s Selecting previously unselected package python-h5netcdf-doc. 261s Preparing to unpack .../12-python-h5netcdf-doc_1.4.0-3_all.deb ... 261s Unpacking python-h5netcdf-doc (1.4.0-3) ... 261s Selecting previously unselected package python3-all. 262s Preparing to unpack .../13-python3-all_3.12.6-0ubuntu1_armhf.deb ... 262s Unpacking python3-all (3.12.6-0ubuntu1) ... 262s Selecting previously unselected package python3-numpy. 262s Preparing to unpack .../14-python3-numpy_1%3a1.26.4+ds-11ubuntu1_armhf.deb ... 262s Unpacking python3-numpy (1:1.26.4+ds-11ubuntu1) ... 262s Selecting previously unselected package python3-cftime. 262s Preparing to unpack .../15-python3-cftime_1.6.4-1build1_armhf.deb ... 262s Unpacking python3-cftime (1.6.4-1build1) ... 262s Selecting previously unselected package python3-h5py-serial. 262s Preparing to unpack .../16-python3-h5py-serial_3.11.0-8ubuntu1_armhf.deb ... 262s Unpacking python3-h5py-serial (3.11.0-8ubuntu1) ... 262s Selecting previously unselected package python3-h5py. 262s Preparing to unpack .../17-python3-h5py_3.11.0-8ubuntu1_all.deb ... 262s Unpacking python3-h5py (3.11.0-8ubuntu1) ... 262s Selecting previously unselected package python3-packaging. 262s Preparing to unpack .../18-python3-packaging_24.2-1_all.deb ... 262s Unpacking python3-packaging (24.2-1) ... 262s Selecting previously unselected package python3-h5netcdf. 262s Preparing to unpack .../19-python3-h5netcdf_1.4.0-3_all.deb ... 262s Unpacking python3-h5netcdf (1.4.0-3) ... 262s Selecting previously unselected package python3-iniconfig. 262s Preparing to unpack .../20-python3-iniconfig_1.1.1-2_all.deb ... 262s Unpacking python3-iniconfig (1.1.1-2) ... 262s Selecting previously unselected package python3-netcdf4. 262s Preparing to unpack .../21-python3-netcdf4_1.7.2-1build1_armhf.deb ... 262s Unpacking python3-netcdf4 (1.7.2-1build1) ... 262s Selecting previously unselected package python3-pluggy. 262s Preparing to unpack .../22-python3-pluggy_1.5.0-1_all.deb ... 262s Unpacking python3-pluggy (1.5.0-1) ... 262s Selecting previously unselected package python3-pytest. 262s Preparing to unpack .../23-python3-pytest_8.3.3-1_all.deb ... 262s Unpacking python3-pytest (8.3.3-1) ... 262s Selecting previously unselected package autopkgtest-satdep. 262s Preparing to unpack .../24-1-autopkgtest-satdep.deb ... 262s Unpacking autopkgtest-satdep (0) ... 262s Setting up python3-iniconfig (1.1.1-2) ... 262s Setting up python3-all (3.12.6-0ubuntu1) ... 262s Setting up libaec0:armhf (1.1.3-1) ... 262s Setting up libblas3:armhf (3.12.0-3build2) ... 262s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 262s Setting up python3-packaging (24.2-1) ... 263s Setting up liblzf1:armhf (3.6-4) ... 263s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 263s Setting up python3-pluggy (1.5.0-1) ... 263s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 263s Setting up libsz2:armhf (1.1.3-1) ... 263s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 263s Setting up liblapack3:armhf (3.12.0-3build2) ... 263s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 263s Setting up python3-pytest (8.3.3-1) ... 263s Setting up python3-numpy (1:1.26.4+ds-11ubuntu1) ... 266s Setting up libjs-sphinxdoc (7.4.7-4) ... 266s Setting up libhdf5-103-1t64:armhf (1.10.10+repack-4ubuntu3) ... 266s Setting up libhdf5-hl-100t64:armhf (1.10.10+repack-4ubuntu3) ... 266s Setting up libnetcdf19t64:armhf (1:4.9.2-6ubuntu1) ... 266s Setting up python3-h5py-serial (3.11.0-8ubuntu1) ... 266s Setting up python-h5netcdf-doc (1.4.0-3) ... 266s Setting up python3-h5py (3.11.0-8ubuntu1) ... 266s Setting up python3-cftime (1.6.4-1build1) ... 266s Setting up python3-netcdf4 (1.7.2-1build1) ... 266s Setting up python3-h5netcdf (1.4.0-3) ... 267s Setting up autopkgtest-satdep (0) ... 267s Processing triggers for man-db (2.13.0-1) ... 267s Processing triggers for libc-bin (2.40-1ubuntu3) ... 284s (Reading database ... 61044 files and directories currently installed.) 284s Removing autopkgtest-satdep (0) ... 290s autopkgtest [16:38:14]: test command1: set -e ; cp -a h5netcdf/tests "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -m pytest -v tests -k "not ros3" ; done 290s autopkgtest [16:38:14]: test command1: [----------------------- 292s Testing with python3.12: 292s ============================= test session starts ============================== 292s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 292s cachedir: .pytest_cache 292s rootdir: /tmp/autopkgtest.vi5Jqk/autopkgtest_tmp/tests 292s configfile: pytest.ini 292s plugins: typeguard-4.4.1 293s collecting ... collected 152 items / 1 deselected / 151 selected 293s 293s tests/test_h5netcdf.py::test_write_legacyapi_read_netCDF4 PASSED [ 0%] 293s tests/test_h5netcdf.py::test_roundtrip_h5netcdf_legacyapi PASSED [ 1%] 293s tests/test_h5netcdf.py::test_write_netCDF4_read_legacyapi PASSED [ 1%] 293s tests/test_h5netcdf.py::test_write_h5netcdf_read_legacyapi PASSED [ 2%] 293s tests/test_h5netcdf.py::test_write_h5netcdf_read_netCDF4 PASSED [ 3%] 293s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-True] PASSED [ 3%] 293s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-False] PASSED [ 4%] 293s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5://testfile-True] SKIPPED [ 5%] 293s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5://testfile-False] SKIPPED [ 5%] 294s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[True] PASSED [ 6%] 294s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[False] PASSED [ 7%] 294s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[True] PASSED [ 7%] 294s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[False] PASSED [ 8%] 294s tests/test_h5netcdf.py::test_fileobj[True] PASSED [ 9%] 294s tests/test_h5netcdf.py::test_fileobj[False] PASSED [ 9%] 294s tests/test_h5netcdf.py::test_h5py_file_obj[True] PASSED [ 10%] 294s tests/test_h5netcdf.py::test_h5py_file_obj[False] PASSED [ 11%] 295s tests/test_h5netcdf.py::test_repr[testfile.nc] PASSED [ 11%] 295s tests/test_h5netcdf.py::test_repr[hdf5://testfile] SKIPPED (h5pyd pa...) [ 12%] 295s tests/test_h5netcdf.py::test_attrs_api[testfile.nc] PASSED [ 13%] 295s tests/test_h5netcdf.py::test_attrs_api[hdf5://testfile] SKIPPED (h5p...) [ 13%] 295s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[testfile.nc] PASSED [ 14%] 295s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[hdf5://testfile] SKIPPED [ 15%] 295s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[testfile.nc] PASSED [ 15%] 295s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[hdf5://testfile] SKIPPED [ 16%] 295s tests/test_h5netcdf.py::test_error_handling[testfile.nc] PASSED [ 17%] 295s tests/test_h5netcdf.py::test_error_handling[hdf5://testfile] SKIPPED [ 17%] 295s tests/test_h5netcdf.py::test_decode_string_error[testfile.nc] PASSED [ 18%] 295s tests/test_h5netcdf.py::test_decode_string_error[hdf5://testfile] SKIPPED [ 19%] 295s tests/test_h5netcdf.py::test_invalid_netcdf4[testfile.nc] PASSED [ 19%] 295s tests/test_h5netcdf.py::test_invalid_netcdf4[hdf5://testfile] SKIPPED [ 20%] 295s tests/test_h5netcdf.py::test_fake_phony_dims[testfile.nc] PASSED [ 21%] 295s tests/test_h5netcdf.py::test_fake_phony_dims[hdf5://testfile] SKIPPED [ 21%] 295s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[testfile.nc] PASSED [ 22%] 295s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[hdf5://testfile] SKIPPED [ 23%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[testfile.nc] PASSED [ 23%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[hdf5://testfile] SKIPPED [ 24%] 295s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[testfile.nc] PASSED [ 25%] 295s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[hdf5://testfile] SKIPPED [ 25%] 295s tests/test_h5netcdf.py::test_Netcdf4Dimid[testfile.nc] PASSED [ 26%] 295s tests/test_h5netcdf.py::test_Netcdf4Dimid[hdf5://testfile] SKIPPED (...) [ 27%] 295s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[True] PASSED [ 27%] 295s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[False] PASSED [ 28%] 295s tests/test_h5netcdf.py::test_nc_properties_new[testfile.nc] PASSED [ 29%] 295s tests/test_h5netcdf.py::test_nc_properties_new[hdf5://testfile] SKIPPED [ 29%] 295s tests/test_h5netcdf.py::test_failed_read_open_and_clean_delete PASSED [ 30%] 295s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[testfile.nc] PASSED [ 31%] 295s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[hdf5://testfile] SKIPPED [ 31%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_error[testfile.nc] PASSED [ 32%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_error[hdf5://testfile] SKIPPED [ 33%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_okay[testfile.nc] PASSED [ 33%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_okay[hdf5://testfile] SKIPPED [ 34%] 295s tests/test_h5netcdf.py::test_invalid_netcdf_overwrite_valid PASSED [ 35%] 295s tests/test_h5netcdf.py::test_reopen_file_different_dimension_sizes PASSED [ 35%] 295s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[testfile.nc] PASSED [ 36%] 295s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[hdf5://testfile] SKIPPED [ 37%] 295s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[testfile.nc] PASSED [ 37%] 295s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[hdf5://testfile] SKIPPED [ 38%] 295s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[testfile.nc] PASSED [ 39%] 295s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[hdf5://testfile] SKIPPED [ 39%] 295s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[testfile.nc] PASSED [ 40%] 295s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[hdf5://testfile] SKIPPED [ 41%] 295s tests/test_h5netcdf.py::test_c_api_can_read_unlimited_dimensions PASSED [ 41%] 295s tests/test_h5netcdf.py::test_reading_unlimited_dimensions_created_with_c_api PASSED [ 42%] 295s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[testfile.nc] PASSED [ 43%] 295s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[hdf5://testfile] SKIPPED [ 43%] 295s tests/test_h5netcdf.py::test_reading_special_datatype_created_with_c_api PASSED [ 44%] 296s tests/test_h5netcdf.py::test_nc4_non_coord[testfile.nc] PASSED [ 45%] 296s tests/test_h5netcdf.py::test_nc4_non_coord[hdf5://testfile] SKIPPED [ 45%] 296s tests/test_h5netcdf.py::test_overwrite_existing_file PASSED [ 46%] 296s tests/test_h5netcdf.py::test_scales_on_append PASSED [ 47%] 296s tests/test_h5netcdf.py::test_create_attach_scales_netcdf4 PASSED [ 47%] 296s tests/test_h5netcdf.py::test_create_attach_scales_legacyapi PASSED [ 48%] 296s tests/test_h5netcdf.py::test_detach_scale[testfile.nc] PASSED [ 49%] 296s tests/test_h5netcdf.py::test_detach_scale[hdf5://testfile] SKIPPED (...) [ 49%] 296s tests/test_h5netcdf.py::test_is_scale[testfile.nc] PASSED [ 50%] 296s tests/test_h5netcdf.py::test_is_scale[hdf5://testfile] SKIPPED (h5py...) [ 50%] 296s tests/test_h5netcdf.py::test_get_dim_scale_refs[testfile.nc] PASSED [ 51%] 296s tests/test_h5netcdf.py::test_get_dim_scale_refs[hdf5://testfile] SKIPPED [ 52%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix0] PASSED [ 52%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix1] PASSED [ 53%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix2] PASSED [ 54%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix3] PASSED [ 54%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix4] PASSED [ 55%] 296s tests/test_h5netcdf.py::test_dimensions[read_write_matrix5] PASSED [ 56%] 297s tests/test_h5netcdf.py::test_dimensions[read_write_matrix6] PASSED [ 56%] 297s tests/test_h5netcdf.py::test_dimensions[read_write_matrix7] PASSED [ 57%] 297s tests/test_h5netcdf.py::test_dimensions[read_write_matrix8] PASSED [ 58%] 297s tests/test_h5netcdf.py::test_no_circular_references[testfile.nc] PASSED [ 58%] 297s tests/test_h5netcdf.py::test_no_circular_references[hdf5://testfile] SKIPPED [ 59%] 297s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[netCDF4] PASSED [ 60%] 297s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[h5netcdf.legacyapi] PASSED [ 60%] 297s tests/test_h5netcdf.py::test_creation_with_h5netcdf_edit_with_netcdf4 PASSED [ 61%] 297s tests/test_h5netcdf.py::test_track_order_specification PASSED [ 62%] 297s tests/test_h5netcdf.py::test_more_than_7_attr_creation PASSED [ 62%] 297s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[False] PASSED [ 63%] 297s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[True] PASSED [ 64%] 297s tests/test_h5netcdf.py::test_group_names PASSED [ 64%] 297s tests/test_h5netcdf.py::test_legacyapi_endianess[testfile.nc] PASSED [ 65%] 297s tests/test_h5netcdf.py::test_legacyapi_endianess[hdf5://testfile] SKIPPED [ 66%] 297s tests/test_h5netcdf.py::test_bool_slicing_length_one_dim PASSED [ 66%] 297s tests/test_h5netcdf.py::test_fancy_indexing[testfile.nc] PASSED [ 67%] 297s tests/test_h5netcdf.py::test_fancy_indexing[hdf5://testfile] SKIPPED [ 68%] 297s tests/test_h5netcdf.py::test_h5py_chunking PASSED [ 68%] 297s tests/test_h5netcdf.py::test_h5netcdf_chunking PASSED [ 69%] 297s tests/test_h5netcdf.py::test_create_invalid_netcdf_catch_error[testfile.nc] PASSED [ 70%] 297s tests/test_h5netcdf.py::test_create_invalid_netcdf_catch_error[hdf5://testfile] SKIPPED [ 70%] 298s tests/test_h5netcdf.py::test_dimensions_in_parent_groups PASSED [ 71%] 298s tests/test_h5netcdf.py::test_array_attributes PASSED [ 72%] 298s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[True] PASSED [ 72%] 298s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[False] PASSED [ 73%] 298s tests/test_h5netcdf.py::test_user_type_errors_new_api[testfile.nc] PASSED [ 74%] 298s tests/test_h5netcdf.py::test_user_type_errors_new_api[hdf5://testfile] SKIPPED [ 74%] 298s tests/test_h5netcdf.py::test_user_type_errors_legacyapi[testfile.nc] PASSED [ 75%] 298s tests/test_h5netcdf.py::test_user_type_errors_legacyapi[hdf5://testfile] SKIPPED [ 76%] 298s tests/test_h5netcdf.py::test_enum_type_errors_new_api[testfile.nc] PASSED [ 76%] 298s tests/test_h5netcdf.py::test_enum_type_errors_new_api[hdf5://testfile] SKIPPED [ 77%] 298s tests/test_h5netcdf.py::test_enum_type_errors_legacyapi[testfile.nc] PASSED [ 78%] 298s tests/test_h5netcdf.py::test_enum_type_errors_legacyapi[hdf5://testfile] SKIPPED [ 78%] 298s tests/test_h5netcdf.py::test_enum_type[testfile.nc] PASSED [ 79%] 298s tests/test_h5netcdf.py::test_enum_type[hdf5://testfile] SKIPPED (h5p...) [ 80%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-netCDF4-int] PASSED [ 80%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-netCDF4-int8] PASSED [ 81%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-netCDF4-uint16] PASSED [ 82%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-netCDF4-float32] PASSED [ 82%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-netCDF4-int64] PASSED [ 83%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-h5netcdf.legacyapi-int] PASSED [ 84%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-h5netcdf.legacyapi-int8] PASSED [ 84%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-h5netcdf.legacyapi-uint16] PASSED [ 85%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-h5netcdf.legacyapi-float32] PASSED [ 86%] 298s tests/test_h5netcdf.py::test_vltype_creation[testfile.nc-h5netcdf.legacyapi-int64] PASSED [ 86%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-netCDF4-int] SKIPPED [ 87%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-netCDF4-int8] SKIPPED [ 88%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-netCDF4-uint16] SKIPPED [ 88%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-netCDF4-float32] SKIPPED [ 89%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-netCDF4-int64] SKIPPED [ 90%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-h5netcdf.legacyapi-int] SKIPPED [ 90%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-h5netcdf.legacyapi-int8] SKIPPED [ 91%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-h5netcdf.legacyapi-uint16] SKIPPED [ 92%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-h5netcdf.legacyapi-float32] SKIPPED [ 92%] 298s tests/test_h5netcdf.py::test_vltype_creation[hdf5://testfile-h5netcdf.legacyapi-int64] SKIPPED [ 93%] 298s tests/test_h5netcdf.py::test_compoundtype_creation[testfile.nc-netCDF4] PASSED [ 94%] 298s tests/test_h5netcdf.py::test_compoundtype_creation[testfile.nc-h5netcdf.legacyapi] PASSED [ 94%] 298s tests/test_h5netcdf.py::test_compoundtype_creation[hdf5://testfile-netCDF4] SKIPPED [ 95%] 298s tests/test_h5netcdf.py::test_compoundtype_creation[hdf5://testfile-h5netcdf.legacyapi] SKIPPED [ 96%] 298s tests/test_h5netcdf.py::test_nc_complex_compatibility[testfile.nc-netCDF4] PASSED [ 96%] 298s tests/test_h5netcdf.py::test_nc_complex_compatibility[testfile.nc-h5netcdf.legacyapi] PASSED [ 97%] 298s tests/test_h5netcdf.py::test_nc_complex_compatibility[hdf5://testfile-netCDF4] SKIPPED [ 98%] 298s tests/test_h5netcdf.py::test_nc_complex_compatibility[hdf5://testfile-h5netcdf.legacyapi] SKIPPED [ 98%] 298s tests/test_h5netcdf.py::test_complex_type_creation_errors SKIPPED (n...) [ 99%] 298s tests/test_h5netcdf.py::test_hsds SKIPPED (h5pyd package not available) [100%] 298s 298s ================= 99 passed, 52 skipped, 1 deselected in 5.91s ================= 298s autopkgtest [16:38:22]: test command1: -----------------------] 302s autopkgtest [16:38:26]: test command1: - - - - - - - - - - results - - - - - - - - - - 302s command1 PASS 306s autopkgtest [16:38:30]: test command2: preparing testbed 316s Reading package lists... 316s Building dependency tree... 316s Reading state information... 316s Starting pkgProblemResolver with broken count: 0 317s Starting 2 pkgProblemResolver with broken count: 0 317s Done 318s The following NEW packages will be installed: 318s autopkgtest-satdep 318s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 318s Need to get 0 B/732 B of archives. 318s After this operation, 0 B of additional disk space will be used. 318s Get:1 /tmp/autopkgtest.vi5Jqk/2-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [732 B] 318s Selecting previously unselected package autopkgtest-satdep. 318s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61044 files and directories currently installed.) 318s Preparing to unpack .../2-autopkgtest-satdep.deb ... 318s Unpacking autopkgtest-satdep (0) ... 318s Setting up autopkgtest-satdep (0) ... 330s (Reading database ... 61044 files and directories currently installed.) 330s Removing autopkgtest-satdep (0) ... 336s autopkgtest [16:39:00]: test command2: set -e ; cp -a h5netcdf/tests "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -m pytest -v tests -k ros3 ; done 336s autopkgtest [16:39:00]: test command2: [----------------------- 338s Testing with python3.12: 339s ============================= test session starts ============================== 339s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 339s cachedir: .pytest_cache 339s rootdir: /tmp/autopkgtest.vi5Jqk/autopkgtest_tmp/tests 339s configfile: pytest.ini 339s plugins: typeguard-4.4.1 339s collecting ... collected 152 items / 151 deselected / 1 selected 339s 377s tests/test_h5netcdf.py::test_ros3 PASSED [100%] 377s 377s ====================== 1 passed, 151 deselected in 38.29s ====================== 377s autopkgtest [16:39:41]: test command2: -----------------------] 381s autopkgtest [16:39:45]: test command2: - - - - - - - - - - results - - - - - - - - - - 381s command2 PASS 385s autopkgtest [16:39:49]: @@@@@@@@@@@@@@@@@@@@ summary 385s command1 PASS 385s command2 PASS