0s autopkgtest [23:05:23]: starting date and time: 2024-11-13 23:05:23+0000 0s autopkgtest [23:05:23]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [23:05:23]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9wv3xqtc/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-gtfparse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- lxd -r lxd-armhf-10.145.243.16 lxd-armhf-10.145.243.16:autopkgtest/ubuntu/plucky/armhf 51s autopkgtest [23:06:14]: testbed dpkg architecture: armhf 53s autopkgtest [23:06:16]: testbed apt version: 2.9.8 53s autopkgtest [23:06:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 61s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 61s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 61s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 61s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [971 kB] 61s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 61s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [104 kB] 61s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [668 kB] 61s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [17.2 kB] 62s Fetched 1958 kB in 1s (2121 kB/s) 62s Reading package lists... 80s tee: /proc/self/fd/2: Permission denied 101s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 101s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 101s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 101s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 102s Reading package lists... 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 103s Calculating upgrade... 103s The following NEW packages will be installed: 103s python3.13-gdbm 103s The following packages will be upgraded: 103s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 103s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 103s python3-newt whiptail 104s 11 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 104s Need to get 1207 kB of archives. 104s After this operation, 124 kB of additional disk space will be used. 104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 104s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 104s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 104s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgnutls30t64 armhf 3.8.8-2ubuntu1 [955 kB] 104s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-newt armhf 0.52.24-2ubuntu4 [19.7 kB] 104s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libnewt0.52 armhf 0.52.24-2ubuntu4 [39.2 kB] 104s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf whiptail armhf 0.52.24-2ubuntu4 [17.2 kB] 104s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 104s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 104s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 104s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-3 [61.7 kB] 104s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libutempter0 armhf 1.2.1-4 [9062 B] 105s Fetched 1207 kB in 1s (2239 kB/s) 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 105s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ... 105s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Setting up python3-minimal (3.12.7-1) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 105s Preparing to unpack .../python3_3.12.7-1_armhf.deb ... 105s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ... 105s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ... 105s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_armhf.deb ... 105s Unpacking libgnutls30t64:armhf (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 105s Setting up libgnutls30t64:armhf (3.8.8-2ubuntu1) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 105s Preparing to unpack .../0-python3-newt_0.52.24-2ubuntu4_armhf.deb ... 105s Unpacking python3-newt:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 105s Preparing to unpack .../1-libnewt0.52_0.52.24-2ubuntu4_armhf.deb ... 105s Unpacking libnewt0.52:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 105s Preparing to unpack .../2-whiptail_0.52.24-2ubuntu4_armhf.deb ... 105s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 105s Selecting previously unselected package python3.13-gdbm. 105s Preparing to unpack .../3-python3.13-gdbm_3.13.0-2_armhf.deb ... 105s Unpacking python3.13-gdbm (3.13.0-2) ... 105s Preparing to unpack .../4-python3-gdbm_3.12.7-1_armhf.deb ... 105s Unpacking python3-gdbm:armhf (3.12.7-1) over (3.12.6-1ubuntu1) ... 105s Preparing to unpack .../5-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 105s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 105s Preparing to unpack .../6-libjson-glib-1.0-0_1.10.0+ds-3_armhf.deb ... 105s Unpacking libjson-glib-1.0-0:armhf (1.10.0+ds-3) over (1.10.0+ds-2) ... 105s Preparing to unpack .../7-libutempter0_1.2.1-4_armhf.deb ... 105s Unpacking libutempter0:armhf (1.2.1-4) over (1.2.1-3build1) ... 105s Setting up libnewt0.52:armhf (0.52.24-2ubuntu4) ... 105s Setting up libutempter0:armhf (1.2.1-4) ... 105s Setting up whiptail (0.52.24-2ubuntu4) ... 105s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 105s Setting up python3.13-gdbm (3.13.0-2) ... 105s Setting up libpython3-stdlib:armhf (3.12.7-1) ... 105s Setting up python3 (3.12.7-1) ... 106s Setting up python3-newt:armhf (0.52.24-2ubuntu4) ... 106s Setting up libjson-glib-1.0-0:armhf (1.10.0+ds-3) ... 106s Setting up python3-gdbm:armhf (3.12.7-1) ... 106s Processing triggers for man-db (2.12.1-3) ... 106s Processing triggers for libc-bin (2.40-1ubuntu3) ... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s autopkgtest [23:07:13]: rebooting testbed after setup commands that affected boot 179s autopkgtest [23:08:22]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 206s autopkgtest [23:08:49]: @@@@@@@@@@@@@@@@@@@@ apt-source python-gtfparse 216s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-gtfparse 1.3.0+ds-1 (dsc) [2217 B] 216s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-gtfparse 1.3.0+ds-1 (tar) [14.4 kB] 216s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-gtfparse 1.3.0+ds-1 (diff) [4296 B] 216s gpgv: Signature made Sun Dec 4 16:14:43 2022 UTC 216s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 216s gpgv: issuer "emollier@emlwks999.eu" 216s gpgv: Can't check signature: No public key 216s dpkg-source: warning: cannot verify inline signature for ./python-gtfparse_1.3.0+ds-1.dsc: no acceptable signature found 216s autopkgtest [23:08:59]: testing package python-gtfparse version 1.3.0+ds-1 219s autopkgtest [23:09:02]: build not needed 221s autopkgtest [23:09:04]: test run-unit-test: preparing testbed 231s Reading package lists... 232s Building dependency tree... 232s Reading state information... 232s Starting pkgProblemResolver with broken count: 0 232s Starting 2 pkgProblemResolver with broken count: 0 232s Done 233s The following additional packages will be installed: 233s libblas3 libgfortran5 liblapack3 python3-dateutil python3-gtfparse 233s python3-iniconfig python3-numpy python3-packaging python3-pandas 233s python3-pandas-lib python3-pluggy python3-pytest python3-six python3-tz 233s Suggested packages: 233s gcc gfortran python-numpy-doc python3-dev python-pandas-doc 233s python3-statsmodels 233s Recommended packages: 233s python3-scipy python3-matplotlib python3-bottleneck python3-numexpr 233s python3-odf python3-openpyxl python3-bs4 python3-html5lib python3-lxml 233s python3-tables 233s The following NEW packages will be installed: 233s autopkgtest-satdep libblas3 libgfortran5 liblapack3 python3-dateutil 233s python3-gtfparse python3-iniconfig python3-numpy python3-packaging 233s python3-pandas python3-pandas-lib python3-pluggy python3-pytest python3-six 233s python3-tz 233s 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. 233s Need to get 14.4 MB/14.4 MB of archives. 233s After this operation, 61.4 MB of additional disk space will be used. 233s Get:1 /tmp/autopkgtest.j3ZfTF/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [720 B] 233s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 233s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 234s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 234s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-six all 1.16.0-7 [13.1 kB] 234s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dateutil all 2.9.0-2 [80.3 kB] 234s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 234s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2024.1-2 [31.4 kB] 234s Get:9 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-5 [4728 kB] 234s Get:10 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-5 [3112 kB] 235s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-gtfparse all 1.3.0+ds-1 [10.1 kB] 235s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 235s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 235s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 235s Get:15 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 235s Fetched 14.4 MB in 1s (9746 kB/s) 235s Selecting previously unselected package libblas3:armhf. 235s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59567 files and directories currently installed.) 235s Preparing to unpack .../00-libblas3_3.12.0-3build2_armhf.deb ... 235s Unpacking libblas3:armhf (3.12.0-3build2) ... 235s Selecting previously unselected package libgfortran5:armhf. 235s Preparing to unpack .../01-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 235s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 235s Selecting previously unselected package liblapack3:armhf. 235s Preparing to unpack .../02-liblapack3_3.12.0-3build2_armhf.deb ... 235s Unpacking liblapack3:armhf (3.12.0-3build2) ... 235s Selecting previously unselected package python3-six. 235s Preparing to unpack .../03-python3-six_1.16.0-7_all.deb ... 235s Unpacking python3-six (1.16.0-7) ... 235s Selecting previously unselected package python3-dateutil. 235s Preparing to unpack .../04-python3-dateutil_2.9.0-2_all.deb ... 235s Unpacking python3-dateutil (2.9.0-2) ... 235s Selecting previously unselected package python3-numpy. 235s Preparing to unpack .../05-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 235s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 235s Selecting previously unselected package python3-tz. 235s Preparing to unpack .../06-python3-tz_2024.1-2_all.deb ... 235s Unpacking python3-tz (2024.1-2) ... 235s Selecting previously unselected package python3-pandas-lib:armhf. 235s Preparing to unpack .../07-python3-pandas-lib_2.2.3+dfsg-5_armhf.deb ... 235s Unpacking python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 236s Selecting previously unselected package python3-pandas. 236s Preparing to unpack .../08-python3-pandas_2.2.3+dfsg-5_all.deb ... 236s Unpacking python3-pandas (2.2.3+dfsg-5) ... 236s Selecting previously unselected package python3-gtfparse. 236s Preparing to unpack .../09-python3-gtfparse_1.3.0+ds-1_all.deb ... 236s Unpacking python3-gtfparse (1.3.0+ds-1) ... 236s Selecting previously unselected package python3-iniconfig. 236s Preparing to unpack .../10-python3-iniconfig_1.1.1-2_all.deb ... 236s Unpacking python3-iniconfig (1.1.1-2) ... 236s Selecting previously unselected package python3-packaging. 236s Preparing to unpack .../11-python3-packaging_24.1-1_all.deb ... 236s Unpacking python3-packaging (24.1-1) ... 236s Selecting previously unselected package python3-pluggy. 236s Preparing to unpack .../12-python3-pluggy_1.5.0-1_all.deb ... 236s Unpacking python3-pluggy (1.5.0-1) ... 236s Selecting previously unselected package python3-pytest. 236s Preparing to unpack .../13-python3-pytest_8.3.3-1_all.deb ... 236s Unpacking python3-pytest (8.3.3-1) ... 236s Selecting previously unselected package autopkgtest-satdep. 236s Preparing to unpack .../14-1-autopkgtest-satdep.deb ... 236s Unpacking autopkgtest-satdep (0) ... 236s Setting up python3-iniconfig (1.1.1-2) ... 236s Setting up python3-tz (2024.1-2) ... 237s Setting up python3-six (1.16.0-7) ... 237s Setting up libblas3:armhf (3.12.0-3build2) ... 237s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 237s Setting up python3-packaging (24.1-1) ... 237s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 237s Setting up python3-pluggy (1.5.0-1) ... 237s Setting up python3-dateutil (2.9.0-2) ... 237s Setting up liblapack3:armhf (3.12.0-3build2) ... 237s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 237s Setting up python3-pytest (8.3.3-1) ... 237s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 239s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 239s Setting up python3-pandas (2.2.3+dfsg-5) ... 245s Setting up python3-gtfparse (1.3.0+ds-1) ... 245s Setting up autopkgtest-satdep (0) ... 245s Processing triggers for man-db (2.12.1-3) ... 245s Processing triggers for libc-bin (2.40-1ubuntu3) ... 256s (Reading database ... 62458 files and directories currently installed.) 256s Removing autopkgtest-satdep (0) ... 263s autopkgtest [23:09:46]: test run-unit-test: [----------------------- 265s Testing with python3.13 in /tmp/autopkgtest.j3ZfTF/build.liY/src: 265s ============================= test session starts ============================== 265s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 265s cachedir: .pytest_cache 265s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 265s plugins: typeguard-4.4.1 265s collecting ... collected 2 items 265s 265s test/test_create_missing_features.py::test_create_missing_features_identity PASSED [ 50%] 265s test/test_create_missing_features.py::test_create_missing_features PASSED [100%] 265s 265s ============================== 2 passed in 0.48s =============================== 266s ============================= test session starts ============================== 266s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 266s cachedir: .pytest_cache 266s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 266s plugins: typeguard-4.4.1 266s collecting ... collected 3 items 266s 266s test/test_expand_attributes.py::test_attributes_in_quotes PASSED [ 33%] 266s test/test_expand_attributes.py::test_attributes_without_quotes PASSED [ 66%] 266s test/test_expand_attributes.py::test_optional_attributes PASSED [100%] 266s 266s ============================== 3 passed in 0.38s =============================== 266s ============================= test session starts ============================== 266s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 266s cachedir: .pytest_cache 266s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 266s plugins: typeguard-4.4.1 267s collecting ... collected 3 items 267s 267s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes PASSED [ 33%] 267s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes_with_usecols PASSED [ 66%] 267s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes_with_usecols_other_column PASSED [100%] 267s 267s ============================== 3 passed in 0.36s =============================== 267s ============================= test session starts ============================== 267s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 267s cachedir: .pytest_cache 267s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 267s plugins: typeguard-4.4.1 267s collecting ... collected 4 items 267s 267s test/test_parse_gtf_lines.py::test_parse_gtf_lines_with_expand_attributes PASSED [ 25%] 267s test/test_parse_gtf_lines.py::test_parse_gtf_lines_without_expand_attributes PASSED [ 50%] 267s test/test_parse_gtf_lines.py::test_parse_gtf_lines_error_too_many_fields PASSED [ 75%] 267s test/test_parse_gtf_lines.py::test_parse_gtf_lines_error_too_few_fields PASSED [100%] 267s 267s ============================== 4 passed in 0.37s =============================== 268s Testing with python3.12 in /tmp/autopkgtest.j3ZfTF/build.liY/src: 268s ============================= test session starts ============================== 268s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 268s cachedir: .pytest_cache 268s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 268s plugins: typeguard-4.4.1 268s collecting ... collected 2 items 268s 268s test/test_create_missing_features.py::test_create_missing_features_identity PASSED [ 50%] 268s test/test_create_missing_features.py::test_create_missing_features PASSED [100%] 268s 268s ============================== 2 passed in 0.36s =============================== 268s ============================= test session starts ============================== 268s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 268s cachedir: .pytest_cache 268s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 268s plugins: typeguard-4.4.1 269s collecting ... collected 3 items 269s 269s test/test_expand_attributes.py::test_attributes_in_quotes PASSED [ 33%] 269s test/test_expand_attributes.py::test_attributes_without_quotes PASSED [ 66%] 269s test/test_expand_attributes.py::test_optional_attributes PASSED [100%] 269s 269s ============================== 3 passed in 0.35s =============================== 269s ============================= test session starts ============================== 269s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 269s cachedir: .pytest_cache 269s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 269s plugins: typeguard-4.4.1 270s collecting ... collected 3 items 270s 270s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes PASSED [ 33%] 270s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes_with_usecols PASSED [ 66%] 270s test/test_multiple_values_for_tag_attribute.py::test_parse_tag_attributes_with_usecols_other_column PASSED [100%] 270s 270s ============================== 3 passed in 0.37s =============================== 270s ============================= test session starts ============================== 270s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3 270s cachedir: .pytest_cache 270s rootdir: /tmp/autopkgtest.j3ZfTF/build.liY/src 270s plugins: typeguard-4.4.1 270s collecting ... collected 4 items 270s 270s test/test_parse_gtf_lines.py::test_parse_gtf_lines_with_expand_attributes PASSED [ 25%] 270s test/test_parse_gtf_lines.py::test_parse_gtf_lines_without_expand_attributes PASSED [ 50%] 270s test/test_parse_gtf_lines.py::test_parse_gtf_lines_error_too_many_fields PASSED [ 75%] 270s test/test_parse_gtf_lines.py::test_parse_gtf_lines_error_too_few_fields PASSED [100%] 270s 270s ============================== 4 passed in 0.38s =============================== 271s autopkgtest [23:09:54]: test run-unit-test: -----------------------] 275s autopkgtest [23:09:58]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 275s run-unit-test PASS 279s autopkgtest [23:10:02]: test autodep8-python3: preparing testbed 333s autopkgtest [23:10:56]: testbed dpkg architecture: armhf 335s autopkgtest [23:10:58]: testbed apt version: 2.9.8 335s autopkgtest [23:10:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 343s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 343s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 343s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [971 kB] 344s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 344s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 344s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [104 kB] 344s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [668 kB] 344s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [17.2 kB] 344s Fetched 1958 kB in 1s (2111 kB/s) 344s Reading package lists... 360s tee: /proc/self/fd/2: Permission denied 381s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 381s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 381s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 381s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 382s Reading package lists... 382s Reading package lists... 383s Building dependency tree... 383s Reading state information... 383s Calculating upgrade... 384s The following NEW packages will be installed: 384s python3.13-gdbm 384s The following packages will be upgraded: 384s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 384s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 384s python3-newt whiptail 384s 11 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 384s Need to get 1207 kB of archives. 384s After this operation, 124 kB of additional disk space will be used. 384s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 384s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 384s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 384s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgnutls30t64 armhf 3.8.8-2ubuntu1 [955 kB] 384s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-newt armhf 0.52.24-2ubuntu4 [19.7 kB] 384s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libnewt0.52 armhf 0.52.24-2ubuntu4 [39.2 kB] 384s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf whiptail armhf 0.52.24-2ubuntu4 [17.2 kB] 384s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 384s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 384s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 384s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-3 [61.7 kB] 384s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libutempter0 armhf 1.2.1-4 [9062 B] 385s Fetched 1207 kB in 1s (2015 kB/s) 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 385s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ... 385s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 385s Setting up python3-minimal (3.12.7-1) ... 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 385s Preparing to unpack .../python3_3.12.7-1_armhf.deb ... 385s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 385s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ... 385s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ... 385s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_armhf.deb ... 385s Unpacking libgnutls30t64:armhf (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 385s Setting up libgnutls30t64:armhf (3.8.8-2ubuntu1) ... 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 385s Preparing to unpack .../0-python3-newt_0.52.24-2ubuntu4_armhf.deb ... 385s Unpacking python3-newt:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 385s Preparing to unpack .../1-libnewt0.52_0.52.24-2ubuntu4_armhf.deb ... 385s Unpacking libnewt0.52:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 385s Preparing to unpack .../2-whiptail_0.52.24-2ubuntu4_armhf.deb ... 385s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 385s Selecting previously unselected package python3.13-gdbm. 385s Preparing to unpack .../3-python3.13-gdbm_3.13.0-2_armhf.deb ... 385s Unpacking python3.13-gdbm (3.13.0-2) ... 385s Preparing to unpack .../4-python3-gdbm_3.12.7-1_armhf.deb ... 385s Unpacking python3-gdbm:armhf (3.12.7-1) over (3.12.6-1ubuntu1) ... 385s Preparing to unpack .../5-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 385s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 385s Preparing to unpack .../6-libjson-glib-1.0-0_1.10.0+ds-3_armhf.deb ... 385s Unpacking libjson-glib-1.0-0:armhf (1.10.0+ds-3) over (1.10.0+ds-2) ... 385s Preparing to unpack .../7-libutempter0_1.2.1-4_armhf.deb ... 385s Unpacking libutempter0:armhf (1.2.1-4) over (1.2.1-3build1) ... 385s Setting up libnewt0.52:armhf (0.52.24-2ubuntu4) ... 385s Setting up libutempter0:armhf (1.2.1-4) ... 385s Setting up whiptail (0.52.24-2ubuntu4) ... 385s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 385s Setting up python3.13-gdbm (3.13.0-2) ... 385s Setting up libpython3-stdlib:armhf (3.12.7-1) ... 385s Setting up python3 (3.12.7-1) ... 386s Setting up python3-newt:armhf (0.52.24-2ubuntu4) ... 386s Setting up libjson-glib-1.0-0:armhf (1.10.0+ds-3) ... 386s Setting up python3-gdbm:armhf (3.12.7-1) ... 386s Processing triggers for man-db (2.12.1-3) ... 386s Processing triggers for libc-bin (2.40-1ubuntu3) ... 387s Reading package lists... 387s Building dependency tree... 387s Reading state information... 388s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 390s autopkgtest [23:11:53]: rebooting testbed after setup commands that affected boot 493s Reading package lists... 494s Building dependency tree... 494s Reading state information... 494s Starting pkgProblemResolver with broken count: 0 494s Starting 2 pkgProblemResolver with broken count: 0 494s Done 495s The following additional packages will be installed: 495s libblas3 libgfortran5 liblapack3 libpython3.13-minimal libpython3.13-stdlib 495s python3-all python3-dateutil python3-gtfparse python3-numpy python3-pandas 495s python3-pandas-lib python3-six python3-tz python3.13 python3.13-minimal 495s Suggested packages: 495s gcc gfortran python-numpy-doc python3-dev python3-pytest python-pandas-doc 495s python3-statsmodels python3.13-venv python3.13-doc binfmt-support 495s Recommended packages: 495s python3-scipy python3-matplotlib python3-bottleneck python3-numexpr 495s python3-odf python3-openpyxl python3-bs4 python3-html5lib python3-lxml 495s python3-tables 495s The following NEW packages will be installed: 495s autopkgtest-satdep libblas3 libgfortran5 liblapack3 libpython3.13-minimal 495s libpython3.13-stdlib python3-all python3-dateutil python3-gtfparse 495s python3-numpy python3-pandas python3-pandas-lib python3-six python3-tz 495s python3.13 python3.13-minimal 495s 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. 495s Need to get 19.5 MB/19.5 MB of archives. 495s After this operation, 78.9 MB of additional disk space will be used. 495s Get:1 /tmp/autopkgtest.j3ZfTF/2-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [712 B] 495s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB] 495s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB] 495s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 495s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 495s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 496s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB] 496s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB] 496s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B] 496s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf python3-six all 1.16.0-7 [13.1 kB] 496s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dateutil all 2.9.0-2 [80.3 kB] 496s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 496s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2024.1-2 [31.4 kB] 496s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-5 [4728 kB] 496s Get:15 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-5 [3112 kB] 496s Get:16 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-gtfparse all 1.3.0+ds-1 [10.1 kB] 497s Fetched 19.5 MB in 1s (13.0 MB/s) 497s Selecting previously unselected package libpython3.13-minimal:armhf. 497s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59567 files and directories currently installed.) 497s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_armhf.deb ... 497s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ... 497s Selecting previously unselected package python3.13-minimal. 497s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_armhf.deb ... 497s Unpacking python3.13-minimal (3.13.0-2) ... 497s Selecting previously unselected package libblas3:armhf. 497s Preparing to unpack .../02-libblas3_3.12.0-3build2_armhf.deb ... 497s Unpacking libblas3:armhf (3.12.0-3build2) ... 497s Selecting previously unselected package libgfortran5:armhf. 497s Preparing to unpack .../03-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 497s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 497s Selecting previously unselected package liblapack3:armhf. 497s Preparing to unpack .../04-liblapack3_3.12.0-3build2_armhf.deb ... 497s Unpacking liblapack3:armhf (3.12.0-3build2) ... 497s Selecting previously unselected package libpython3.13-stdlib:armhf. 497s Preparing to unpack .../05-libpython3.13-stdlib_3.13.0-2_armhf.deb ... 497s Unpacking libpython3.13-stdlib:armhf (3.13.0-2) ... 497s Selecting previously unselected package python3.13. 497s Preparing to unpack .../06-python3.13_3.13.0-2_armhf.deb ... 497s Unpacking python3.13 (3.13.0-2) ... 497s Selecting previously unselected package python3-all. 497s Preparing to unpack .../07-python3-all_3.12.7-1_armhf.deb ... 497s Unpacking python3-all (3.12.7-1) ... 497s Selecting previously unselected package python3-six. 497s Preparing to unpack .../08-python3-six_1.16.0-7_all.deb ... 497s Unpacking python3-six (1.16.0-7) ... 497s Selecting previously unselected package python3-dateutil. 497s Preparing to unpack .../09-python3-dateutil_2.9.0-2_all.deb ... 497s Unpacking python3-dateutil (2.9.0-2) ... 497s Selecting previously unselected package python3-numpy. 497s Preparing to unpack .../10-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 497s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 498s Selecting previously unselected package python3-tz. 498s Preparing to unpack .../11-python3-tz_2024.1-2_all.deb ... 498s Unpacking python3-tz (2024.1-2) ... 498s Selecting previously unselected package python3-pandas-lib:armhf. 498s Preparing to unpack .../12-python3-pandas-lib_2.2.3+dfsg-5_armhf.deb ... 498s Unpacking python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 498s Selecting previously unselected package python3-pandas. 498s Preparing to unpack .../13-python3-pandas_2.2.3+dfsg-5_all.deb ... 498s Unpacking python3-pandas (2.2.3+dfsg-5) ... 498s Selecting previously unselected package python3-gtfparse. 498s Preparing to unpack .../14-python3-gtfparse_1.3.0+ds-1_all.deb ... 498s Unpacking python3-gtfparse (1.3.0+ds-1) ... 498s Selecting previously unselected package autopkgtest-satdep. 498s Preparing to unpack .../15-2-autopkgtest-satdep.deb ... 498s Unpacking autopkgtest-satdep (0) ... 498s Setting up python3-tz (2024.1-2) ... 498s Setting up python3-six (1.16.0-7) ... 499s Setting up libpython3.13-minimal:armhf (3.13.0-2) ... 499s Setting up libblas3:armhf (3.12.0-3build2) ... 499s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 499s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 499s Setting up python3.13-minimal (3.13.0-2) ... 500s Setting up python3-dateutil (2.9.0-2) ... 500s Setting up libpython3.13-stdlib:armhf (3.13.0-2) ... 500s Setting up liblapack3:armhf (3.12.0-3build2) ... 500s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 500s Setting up python3.13 (3.13.0-2) ... 502s Setting up python3-all (3.12.7-1) ... 502s Setting up python3-numpy (1:1.26.4+ds-11build1) ... 506s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5) ... 506s Setting up python3-pandas (2.2.3+dfsg-5) ... 517s Setting up python3-gtfparse (1.3.0+ds-1) ... 517s Setting up autopkgtest-satdep (0) ... 517s Processing triggers for systemd (256.5-2ubuntu4) ... 517s Processing triggers for man-db (2.12.1-3) ... 517s Processing triggers for libc-bin (2.40-1ubuntu3) ... 529s (Reading database ... 63029 files and directories currently installed.) 529s Removing autopkgtest-satdep (0) ... 541s autopkgtest [23:14:24]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import gtfparse; print(gtfparse)" ; done 541s autopkgtest [23:14:24]: test autodep8-python3: [----------------------- 543s Testing with python3.13: 543s Traceback (most recent call last): 543s File "", line 1, in 543s import gtfparse; print(gtfparse) 543s ^^^^^^^^^^^^^^^ 543s File "/usr/lib/python3/dist-packages/gtfparse/__init__.py", line 14, in 543s from .create_missing_features import create_missing_features 543s File "/usr/lib/python3/dist-packages/gtfparse/create_missing_features.py", line 16, in 543s import pandas as pd 543s File "/usr/lib/python3/dist-packages/pandas/__init__.py", line 19, in 543s raise ImportError( 543s "Unable to import required dependencies:\n" + "\n".join(_missing_dependencies) 543s ) 543s ImportError: Unable to import required dependencies: 543s numpy: Error importing numpy: you should not try to import numpy from 543s its source directory; please exit the numpy source tree, and relaunch 543s your python interpreter from there. 543s autopkgtest [23:14:26]: test autodep8-python3: -----------------------] 547s autopkgtest [23:14:30]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 547s autodep8-python3 FAIL non-zero exit status 1 551s autopkgtest [23:14:34]: @@@@@@@@@@@@@@@@@@@@ summary 551s run-unit-test PASS 551s autodep8-python3 FAIL non-zero exit status 1