0s autopkgtest [22:17:13]: starting date and time: 2024-11-13 22:17:13+0000 0s autopkgtest [22:17:13]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [22:17:13]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.67hwxf4k/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-deeptools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- lxd -r lxd-armhf-10.145.243.240 lxd-armhf-10.145.243.240:autopkgtest/ubuntu/plucky/armhf 55s autopkgtest [22:18:08]: testbed dpkg architecture: armhf 57s autopkgtest [22:18:10]: testbed apt version: 2.9.8 57s autopkgtest [22:18:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 65s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 65s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 65s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [974 kB] 65s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 65s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 65s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [104 kB] 65s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [666 kB] 65s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [17.2 kB] 66s Fetched 1959 kB in 1s (2102 kB/s) 66s Reading package lists... 84s tee: /proc/self/fd/2: Permission denied 105s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 105s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 107s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 107s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 107s Reading package lists... 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Calculating upgrade... 109s The following NEW packages will be installed: 109s python3.13-gdbm 109s The following packages will be upgraded: 109s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 109s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 109s python3-newt whiptail 109s 11 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 109s Need to get 1207 kB of archives. 109s After this operation, 124 kB of additional disk space will be used. 109s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 109s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgnutls30t64 armhf 3.8.8-2ubuntu1 [955 kB] 110s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-newt armhf 0.52.24-2ubuntu4 [19.7 kB] 110s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libnewt0.52 armhf 0.52.24-2ubuntu4 [39.2 kB] 110s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf whiptail armhf 0.52.24-2ubuntu4 [17.2 kB] 110s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 110s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 110s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 110s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-3 [61.7 kB] 110s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libutempter0 armhf 1.2.1-4 [9062 B] 110s Fetched 1207 kB in 1s (2143 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 110s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ... 110s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 110s Setting up python3-minimal (3.12.7-1) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 111s Preparing to unpack .../python3_3.12.7-1_armhf.deb ... 111s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 111s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ... 111s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ... 111s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_armhf.deb ... 111s Unpacking libgnutls30t64:armhf (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 111s Setting up libgnutls30t64:armhf (3.8.8-2ubuntu1) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 111s Preparing to unpack .../0-python3-newt_0.52.24-2ubuntu4_armhf.deb ... 111s Unpacking python3-newt:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 111s Preparing to unpack .../1-libnewt0.52_0.52.24-2ubuntu4_armhf.deb ... 111s Unpacking libnewt0.52:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 111s Preparing to unpack .../2-whiptail_0.52.24-2ubuntu4_armhf.deb ... 111s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 111s Selecting previously unselected package python3.13-gdbm. 111s Preparing to unpack .../3-python3.13-gdbm_3.13.0-2_armhf.deb ... 111s Unpacking python3.13-gdbm (3.13.0-2) ... 111s Preparing to unpack .../4-python3-gdbm_3.12.7-1_armhf.deb ... 111s Unpacking python3-gdbm:armhf (3.12.7-1) over (3.12.6-1ubuntu1) ... 111s Preparing to unpack .../5-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 111s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 111s Preparing to unpack .../6-libjson-glib-1.0-0_1.10.0+ds-3_armhf.deb ... 111s Unpacking libjson-glib-1.0-0:armhf (1.10.0+ds-3) over (1.10.0+ds-2) ... 111s Preparing to unpack .../7-libutempter0_1.2.1-4_armhf.deb ... 111s Unpacking libutempter0:armhf (1.2.1-4) over (1.2.1-3build1) ... 112s Setting up libnewt0.52:armhf (0.52.24-2ubuntu4) ... 112s Setting up libutempter0:armhf (1.2.1-4) ... 112s Setting up whiptail (0.52.24-2ubuntu4) ... 112s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 112s Setting up python3.13-gdbm (3.13.0-2) ... 112s Setting up libpython3-stdlib:armhf (3.12.7-1) ... 112s Setting up python3 (3.12.7-1) ... 112s Setting up python3-newt:armhf (0.52.24-2ubuntu4) ... 112s Setting up libjson-glib-1.0-0:armhf (1.10.0+ds-3) ... 112s Setting up python3-gdbm:armhf (3.12.7-1) ... 112s Processing triggers for man-db (2.12.1-3) ... 113s Processing triggers for libc-bin (2.40-1ubuntu3) ... 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 116s autopkgtest [22:19:09]: rebooting testbed after setup commands that affected boot 186s autopkgtest [22:20:19]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 214s autopkgtest [22:20:47]: @@@@@@@@@@@@@@@@@@@@ apt-source python-deeptools 230s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-deeptools 3.5.5+dfsg-1 (dsc) [2548 B] 230s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-deeptools 3.5.5+dfsg-1 (tar) [24.6 MB] 230s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-deeptools 3.5.5+dfsg-1 (diff) [6080 B] 230s gpgv: Signature made Sun May 12 18:01:07 2024 UTC 230s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 230s gpgv: issuer "emollier@debian.org" 230s gpgv: Can't check signature: No public key 230s dpkg-source: warning: cannot verify inline signature for ./python-deeptools_3.5.5+dfsg-1.dsc: no acceptable signature found 231s autopkgtest [22:21:04]: testing package python-deeptools version 3.5.5+dfsg-1 233s autopkgtest [22:21:06]: build not needed 238s autopkgtest [22:21:11]: test pybuild-autopkgtest: preparing testbed 249s Reading package lists... 249s Building dependency tree... 249s Reading state information... 251s Starting pkgProblemResolver with broken count: 0 251s Starting 2 pkgProblemResolver with broken count: 0 251s Done 253s The following additional packages will be installed: 253s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14 253s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper debugedit 253s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common dwz 253s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14 253s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 253s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext intltool-debian 253s libarchive-zip-perl libasan8 libbigwig0t64 libblas3 libc-dev-bin libc6-dev 253s libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 253s libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-14-dev 253s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3t64 libhtscodecs2 253s libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 253s libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 253s liblbfgsb0 liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpython3.12t64 253s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0 253s libsharpyuv0 libstdc++-14-dev libtcl8.6 libtiff6 libtk8.6 libtool libubsan1 253s libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 253s linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest 253s pybuild-plugin-pyproject python-matplotlib-data python3-alabaster 253s python3-all python3-appdirs python3-brotli python3-build python3-contourpy 253s python3-cycler python3-dateutil python3-decorator python3-deeptools 253s python3-deeptoolsintervals python3-defusedxml python3-docutils 253s python3-fastjsonschema python3-fonttools python3-fs python3-imagesize 253s python3-iniconfig python3-installer python3-jupyter-core python3-kiwisolver 253s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-nbformat 253s python3-numpy python3-numpydoc python3-packaging python3-pil 253s python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy 253s python3-py2bit python3-pybigwig python3-pyproject-hooks python3-pysam 253s python3-pytest python3-roman python3-scipy python3-six 253s python3-snowballstemmer python3-sphinx python3-sympy python3-tabulate 253s python3-tenacity python3-tk python3-toml python3-traitlets python3-tz 253s python3-ufolib2 python3-unicodedata2 python3-wheel python3.12-tk python3.13 253s python3.13-minimal python3.13-tk rpcsvc-proto sgml-base sphinx-common 253s tk8.6-blt2.5 unicode-data x11-common xml-core 253s Suggested packages: 253s autoconf-archive gnu-standards autoconf-doc blt-demo cpp-doc gcc-14-locales 253s cpp-14-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex bison gdb 253s gcc-doc gdb-arm-linux-gnueabihf gettext-doc libasprintf-dev libgettextpo-dev 253s libc-devtools glibc-doc libjs-jquery-ui-docs liblcms2-utils libstdc++-14-doc 253s tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc 253s libmail-box-perl python3-pip python3-venv python-build-doc python-cycler-doc 253s python-python-deeptoolsintervals-doc docutils-doc fonts-linuxlibertine 253s | ttf-linux-libertine texlive-lang-french texlive-latex-base 253s texlive-latex-recommended python-fastjsonschema-doc python-installer-doc 253s python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript 253s gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc 253s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 253s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 253s python3-gmpy2 gfortran python-numpy-doc python3-dev python-pil-doc 253s python3-pandas python3-ipykernel python-scipy-doc python3-stemmer dvisvgm 253s fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax 253s python3-sphinx-rtd-theme sphinx-doc tex-gyre texlive-fonts-extra 253s texlive-fonts-recommended texlive-plain-generic python-sympy-doc 253s python-tenacity-doc tix python3-tk-dbg python-traitlets-doc python3.13-venv 253s python3.13-doc binfmt-support sgml-base-doc 253s Recommended packages: 253s manpages manpages-dev libarchive-cpio-perl javascript-common libjson-xs-perl 253s libltdl-dev libmail-sendmail-perl libpaper-utils python3-bs4 253s python3-cssselect python3-html5lib python3-olefile isympy-common 253s The following NEW packages will be installed: 253s autoconf automake autopkgtest-satdep autopoint autotools-dev blt 253s build-essential cpp cpp-14 cpp-14-arm-linux-gnueabihf 253s cpp-arm-linux-gnueabihf debhelper debugedit dh-autoreconf dh-python 253s dh-strip-nondeterminism docutils-common dwz fontconfig-config 253s fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14 253s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 253s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext intltool-debian 253s libarchive-zip-perl libasan8 libbigwig0t64 libblas3 libc-dev-bin libc6-dev 253s libcc1-0 libcrypt-dev libdebhelper-perl libdeflate0 253s libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-14-dev 253s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhts3t64 libhtscodecs2 253s libimagequant0 libisl23 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 253s libjs-jquery-ui libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 253s liblbfgsb0 liblcms2-2 liblerc4 libmpc3 libopenjp2-7 libpython3.12t64 253s libpython3.13-minimal libpython3.13-stdlib libqhull-r8.0 libraqm0 253s libsharpyuv0 libstdc++-14-dev libtcl8.6 libtiff6 libtk8.6 libtool libubsan1 253s libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 253s linux-libc-dev m4 po-debconf pybuild-plugin-autopkgtest 253s pybuild-plugin-pyproject python-matplotlib-data python3-alabaster 253s python3-all python3-appdirs python3-brotli python3-build python3-contourpy 253s python3-cycler python3-dateutil python3-decorator python3-deeptools 253s python3-deeptoolsintervals python3-defusedxml python3-docutils 253s python3-fastjsonschema python3-fonttools python3-fs python3-imagesize 254s python3-iniconfig python3-installer python3-jupyter-core python3-kiwisolver 254s python3-lxml python3-lz4 python3-matplotlib python3-mpmath python3-nbformat 254s python3-numpy python3-numpydoc python3-packaging python3-pil 254s python3-pil.imagetk python3-platformdirs python3-plotly python3-pluggy 254s python3-py2bit python3-pybigwig python3-pyproject-hooks python3-pysam 254s python3-pytest python3-roman python3-scipy python3-six 254s python3-snowballstemmer python3-sphinx python3-sympy python3-tabulate 254s python3-tenacity python3-tk python3-toml python3-traitlets python3-tz 254s python3-ufolib2 python3-unicodedata2 python3-wheel python3.12-tk python3.13 254s python3.13-minimal python3.13-tk rpcsvc-proto sgml-base sphinx-common 254s tk8.6-blt2.5 unicode-data x11-common xml-core 254s 0 upgraded, 158 newly installed, 0 to remove and 0 not upgraded. 254s Need to get 127 MB/127 MB of archives. 254s After this operation, 491 MB of additional disk space will be used. 254s Get:1 /tmp/autopkgtest.4ddmNn/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [848 B] 254s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB] 254s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB] 254s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB] 254s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-4build1 [235 kB] 254s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3 [382 kB] 254s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 254s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] 254s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.22.5-2 [616 kB] 254s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [909 kB] 255s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 255s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 255s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 255s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] 255s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] 255s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 255s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 255s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 255s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 255s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.15-1 [685 kB] 255s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7build1 [525 kB] 255s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf blt armhf 2.5.3+dfsg-7build1 [4840 B] 255s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libc-dev-bin armhf 2.40-1ubuntu3 [19.2 kB] 255s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.11.0-8.8 [1628 kB] 255s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] 255s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 255s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libc6-dev armhf 2.40-1ubuntu3 [1370 kB] 255s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 255s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 255s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [9219 kB] 255s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-8ubuntu1 [1032 B] 255s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [5464 B] 255s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.1.0-2ubuntu1 [22.4 kB] 255s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 14.2.0-8ubuntu1 [43.3 kB] 255s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 14.2.0-8ubuntu1 [125 kB] 255s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 14.2.0-8ubuntu1 [2901 kB] 256s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 14.2.0-8ubuntu1 [1150 kB] 256s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-8ubuntu1 [897 kB] 256s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [18.0 MB] 256s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-8ubuntu1 [498 kB] 256s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [1222 B] 256s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.1.0-2ubuntu1 [5002 B] 256s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-8ubuntu1 [2569 kB] 256s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [10.5 MB] 257s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-8ubuntu1 [19.9 kB] 257s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [968 B] 257s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.1.0-2ubuntu1 [1084 B] 257s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 257s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 257s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.4.7-7build1 [166 kB] 257s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 257s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 257s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 257s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.0-1 [5058 B] 257s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-1 [46.5 kB] 257s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 257s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.22.5-2 [995 kB] 257s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 257s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 257s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.20ubuntu1 [893 kB] 257s Get:61 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20241024 [112 kB] 257s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB] 257s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf docutils-common all 0.21.2+dfsg-2 [131 kB] 257s Get:64 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-lyx all 2.4.2.1-1 [171 kB] 257s Get:65 http://ftpmaster.internal/ubuntu plucky/universe armhf libbigwig0t64 armhf 0.4.7+dfsg-3.1build2 [27.0 kB] 257s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 257s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.22-1 [38.9 kB] 257s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 257s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 257s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.0.1-1 [463 kB] 257s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf libhtscodecs2 armhf 1.6.1-1 [67.9 kB] 257s Get:72 http://ftpmaster.internal/ubuntu plucky/universe armhf libhts3t64 armhf 1.20+ds-1 [392 kB] 257s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 257s Get:74 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] 257s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 257s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 257s Get:77 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 257s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 257s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] 257s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-perl all 4.10000-1 [81.9 kB] 257s Get:81 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 257s Get:82 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 257s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 257s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB] 257s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.12t64 armhf 3.12.7-3 [2075 kB] 258s Get:86 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB] 258s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 258s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.1-1build1 [12.4 kB] 258s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB] 258s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 258s Get:91 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB] 258s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 258s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.4.0-0.1 [11.8 kB] 258s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.4.0-0.1 [22.5 kB] 258s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libxslt1.1 armhf 1.1.39-0exp1ubuntu1 [150 kB] 258s Get:96 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 258s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 258s Get:98 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 258s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 258s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.44.0-1 [54.2 kB] 258s Get:101 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 258s Get:102 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 258s Get:103 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20241024 [1728 B] 258s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf python-matplotlib-data all 3.8.3-3 [2928 kB] 258s Get:105 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB] 259s Get:106 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B] 259s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf python3-appdirs all 1.4.4-4 [10.9 kB] 259s Get:108 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-brotli armhf 1.1.0-2build2 [321 kB] 259s Get:109 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 259s Get:110 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-contourpy armhf 1.3.0-2 [192 kB] 259s Get:111 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cycler all 0.12.1-1 [9716 B] 259s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf python3-six all 1.16.0-7 [13.1 kB] 259s Get:113 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dateutil all 2.9.0-2 [80.3 kB] 259s Get:114 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 259s Get:115 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-deeptoolsintervals armhf 0.1.9-3build9 [50.1 kB] 259s Get:116 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.0-2ubuntu1 [170 kB] 259s Get:117 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 10.4.0-1ubuntu1 [428 kB] 259s Get:118 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-tk armhf 3.12.7-3 [112 kB] 259s Get:119 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-tk armhf 3.13.0-2 [103 kB] 259s Get:120 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-tk armhf 3.12.7-1 [9752 B] 259s Get:121 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pil.imagetk armhf 10.4.0-1ubuntu1 [8848 B] 259s Get:122 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.13.1-5 [16.4 MB] 260s Get:123 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ufolib2 all 0.16.1+dfsg1-1 [33.4 kB] 260s Get:124 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpmath all 1.3.0-1 [425 kB] 260s Get:125 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sympy all 1.13.3-1 [4228 kB] 260s Get:126 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2024.1-2 [31.4 kB] 260s Get:127 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fs all 2.4.16-4 [91.3 kB] 260s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lxml armhf 5.3.0-1 [1234 kB] 260s Get:129 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-lz4 armhf 4.0.2+dfsg-1build4 [24.8 kB] 260s Get:130 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-unicodedata2 armhf 15.1.0+ds-1build1 [361 kB] 260s Get:131 http://ftpmaster.internal/ubuntu plucky/universe armhf unicode-data all 15.1.0-1 [8878 kB] 260s Get:132 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fonttools armhf 4.46.0-1build2 [1402 kB] 261s Get:133 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-kiwisolver armhf 1.4.7-2 [57.0 kB] 261s Get:134 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-matplotlib armhf 3.8.3-3 [4500 kB] 261s Get:135 http://ftpmaster.internal/ubuntu plucky/main armhf python3-defusedxml all 0.7.1-2 [42.0 kB] 261s Get:136 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-common all 7.4.7-4 [775 kB] 261s Get:137 http://ftpmaster.internal/ubuntu plucky/main armhf python3-alabaster all 0.7.16-0.1 [18.5 kB] 261s Get:138 http://ftpmaster.internal/ubuntu plucky/main armhf python3-roman all 4.2-1 [10.0 kB] 261s Get:139 http://ftpmaster.internal/ubuntu plucky/main armhf python3-docutils all 0.21.2+dfsg-2 [409 kB] 261s Get:140 http://ftpmaster.internal/ubuntu plucky/main armhf python3-imagesize all 1.4.1-1 [6844 B] 261s Get:141 http://ftpmaster.internal/ubuntu plucky/main armhf python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 261s Get:142 http://ftpmaster.internal/ubuntu plucky/main armhf python3-sphinx all 7.4.7-4 [593 kB] 261s Get:143 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tabulate all 0.9.0-1 [45.3 kB] 261s Get:144 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-numpydoc all 1.6.0-2 [50.5 kB] 261s Get:145 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fastjsonschema all 2.20.0-1 [20.1 kB] 261s Get:146 http://ftpmaster.internal/ubuntu plucky/main armhf python3-platformdirs all 4.3.6-1 [16.8 kB] 261s Get:147 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 261s Get:148 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-jupyter-core all 5.7.2-4 [28.0 kB] 261s Get:149 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-nbformat all 5.9.1-1 [41.2 kB] 261s Get:150 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tenacity all 8.5.0-0ubuntu1 [17.0 kB] 261s Get:151 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-plotly all 5.20.0+dfsg-1 [2766 kB] 261s Get:152 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-py2bit armhf 0.3.1-3 [17.9 kB] 261s Get:153 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pybigwig armhf 0.3.23+dfsg-1 [37.1 kB] 261s Get:154 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pysam armhf 0.22.1+ds-2 [3383 kB] 261s Get:155 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-deeptools all 3.5.5+dfsg-1 [141 kB] 261s Get:156 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 261s Get:157 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 261s Get:158 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 262s Fetched 127 MB in 8s (15.9 MB/s) 262s Selecting previously unselected package libpython3.13-minimal:armhf. 262s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59567 files and directories currently installed.) 262s Preparing to unpack .../000-libpython3.13-minimal_3.13.0-2_armhf.deb ... 262s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ... 262s Selecting previously unselected package python3.13-minimal. 262s Preparing to unpack .../001-python3.13-minimal_3.13.0-2_armhf.deb ... 262s Unpacking python3.13-minimal (3.13.0-2) ... 262s Selecting previously unselected package sgml-base. 262s Preparing to unpack .../002-sgml-base_1.31_all.deb ... 262s Unpacking sgml-base (1.31) ... 262s Selecting previously unselected package m4. 262s Preparing to unpack .../003-m4_1.4.19-4build1_armhf.deb ... 262s Unpacking m4 (1.4.19-4build1) ... 262s Selecting previously unselected package autoconf. 262s Preparing to unpack .../004-autoconf_2.72-3_all.deb ... 262s Unpacking autoconf (2.72-3) ... 262s Selecting previously unselected package autotools-dev. 262s Preparing to unpack .../005-autotools-dev_20220109.1_all.deb ... 262s Unpacking autotools-dev (20220109.1) ... 262s Selecting previously unselected package automake. 262s Preparing to unpack .../006-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 262s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 263s Selecting previously unselected package autopoint. 263s Preparing to unpack .../007-autopoint_0.22.5-2_all.deb ... 263s Unpacking autopoint (0.22.5-2) ... 263s Selecting previously unselected package libtcl8.6:armhf. 263s Preparing to unpack .../008-libtcl8.6_8.6.15+dfsg-2_armhf.deb ... 263s Unpacking libtcl8.6:armhf (8.6.15+dfsg-2) ... 263s Selecting previously unselected package libfreetype6:armhf. 263s Preparing to unpack .../009-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 263s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 263s Selecting previously unselected package fonts-dejavu-mono. 263s Preparing to unpack .../010-fonts-dejavu-mono_2.37-8_all.deb ... 263s Unpacking fonts-dejavu-mono (2.37-8) ... 263s Selecting previously unselected package fonts-dejavu-core. 263s Preparing to unpack .../011-fonts-dejavu-core_2.37-8_all.deb ... 263s Unpacking fonts-dejavu-core (2.37-8) ... 263s Selecting previously unselected package fontconfig-config. 263s Preparing to unpack .../012-fontconfig-config_2.15.0-1.1ubuntu2_armhf.deb ... 263s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 263s Selecting previously unselected package libfontconfig1:armhf. 263s Preparing to unpack .../013-libfontconfig1_2.15.0-1.1ubuntu2_armhf.deb ... 263s Unpacking libfontconfig1:armhf (2.15.0-1.1ubuntu2) ... 263s Selecting previously unselected package libxrender1:armhf. 263s Preparing to unpack .../014-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 263s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 263s Selecting previously unselected package libxft2:armhf. 263s Preparing to unpack .../015-libxft2_2.3.6-1build1_armhf.deb ... 263s Unpacking libxft2:armhf (2.3.6-1build1) ... 263s Selecting previously unselected package x11-common. 263s Preparing to unpack .../016-x11-common_1%3a7.7+23ubuntu3_all.deb ... 263s Unpacking x11-common (1:7.7+23ubuntu3) ... 263s Selecting previously unselected package libxss1:armhf. 263s Preparing to unpack .../017-libxss1_1%3a1.2.3-1build3_armhf.deb ... 263s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 263s Selecting previously unselected package libtk8.6:armhf. 263s Preparing to unpack .../018-libtk8.6_8.6.15-1_armhf.deb ... 263s Unpacking libtk8.6:armhf (8.6.15-1) ... 263s Selecting previously unselected package tk8.6-blt2.5. 263s Preparing to unpack .../019-tk8.6-blt2.5_2.5.3+dfsg-7build1_armhf.deb ... 263s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 263s Selecting previously unselected package blt. 263s Preparing to unpack .../020-blt_2.5.3+dfsg-7build1_armhf.deb ... 263s Unpacking blt (2.5.3+dfsg-7build1) ... 263s Selecting previously unselected package libc-dev-bin. 263s Preparing to unpack .../021-libc-dev-bin_2.40-1ubuntu3_armhf.deb ... 263s Unpacking libc-dev-bin (2.40-1ubuntu3) ... 263s Selecting previously unselected package linux-libc-dev:armhf. 263s Preparing to unpack .../022-linux-libc-dev_6.11.0-8.8_armhf.deb ... 263s Unpacking linux-libc-dev:armhf (6.11.0-8.8) ... 264s Selecting previously unselected package libcrypt-dev:armhf. 264s Preparing to unpack .../023-libcrypt-dev_1%3a4.4.36-4build1_armhf.deb ... 264s Unpacking libcrypt-dev:armhf (1:4.4.36-4build1) ... 264s Selecting previously unselected package rpcsvc-proto. 264s Preparing to unpack .../024-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 264s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 264s Selecting previously unselected package libc6-dev:armhf. 264s Preparing to unpack .../025-libc6-dev_2.40-1ubuntu3_armhf.deb ... 264s Unpacking libc6-dev:armhf (2.40-1ubuntu3) ... 264s Selecting previously unselected package libisl23:armhf. 264s Preparing to unpack .../026-libisl23_0.27-1_armhf.deb ... 264s Unpacking libisl23:armhf (0.27-1) ... 264s Selecting previously unselected package libmpc3:armhf. 264s Preparing to unpack .../027-libmpc3_1.3.1-1build2_armhf.deb ... 264s Unpacking libmpc3:armhf (1.3.1-1build2) ... 264s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 264s Preparing to unpack .../028-cpp-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package cpp-14. 264s Preparing to unpack .../029-cpp-14_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package cpp-arm-linux-gnueabihf. 264s Preparing to unpack .../030-cpp-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 264s Unpacking cpp-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 264s Selecting previously unselected package cpp. 264s Preparing to unpack .../031-cpp_4%3a14.1.0-2ubuntu1_armhf.deb ... 264s Unpacking cpp (4:14.1.0-2ubuntu1) ... 264s Selecting previously unselected package libcc1-0:armhf. 264s Preparing to unpack .../032-libcc1-0_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking libcc1-0:armhf (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package libgomp1:armhf. 264s Preparing to unpack .../033-libgomp1_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking libgomp1:armhf (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package libasan8:armhf. 264s Preparing to unpack .../034-libasan8_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking libasan8:armhf (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package libubsan1:armhf. 264s Preparing to unpack .../035-libubsan1_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking libubsan1:armhf (14.2.0-8ubuntu1) ... 264s Selecting previously unselected package libgcc-14-dev:armhf. 264s Preparing to unpack .../036-libgcc-14-dev_14.2.0-8ubuntu1_armhf.deb ... 264s Unpacking libgcc-14-dev:armhf (14.2.0-8ubuntu1) ... 265s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 265s Preparing to unpack .../037-gcc-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 265s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 265s Selecting previously unselected package gcc-14. 265s Preparing to unpack .../038-gcc-14_14.2.0-8ubuntu1_armhf.deb ... 265s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 265s Selecting previously unselected package gcc-arm-linux-gnueabihf. 265s Preparing to unpack .../039-gcc-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 265s Unpacking gcc-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 265s Selecting previously unselected package gcc. 265s Preparing to unpack .../040-gcc_4%3a14.1.0-2ubuntu1_armhf.deb ... 265s Unpacking gcc (4:14.1.0-2ubuntu1) ... 265s Selecting previously unselected package libstdc++-14-dev:armhf. 265s Preparing to unpack .../041-libstdc++-14-dev_14.2.0-8ubuntu1_armhf.deb ... 265s Unpacking libstdc++-14-dev:armhf (14.2.0-8ubuntu1) ... 265s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 265s Preparing to unpack .../042-g++-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 265s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 266s Selecting previously unselected package g++-14. 266s Preparing to unpack .../043-g++-14_14.2.0-8ubuntu1_armhf.deb ... 266s Unpacking g++-14 (14.2.0-8ubuntu1) ... 266s Selecting previously unselected package g++-arm-linux-gnueabihf. 266s Preparing to unpack .../044-g++-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 266s Unpacking g++-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 266s Selecting previously unselected package g++. 266s Preparing to unpack .../045-g++_4%3a14.1.0-2ubuntu1_armhf.deb ... 266s Unpacking g++ (4:14.1.0-2ubuntu1) ... 266s Selecting previously unselected package build-essential. 266s Preparing to unpack .../046-build-essential_12.10ubuntu1_armhf.deb ... 266s Unpacking build-essential (12.10ubuntu1) ... 266s Selecting previously unselected package libdebhelper-perl. 266s Preparing to unpack .../047-libdebhelper-perl_13.20ubuntu1_all.deb ... 266s Unpacking libdebhelper-perl (13.20ubuntu1) ... 266s Selecting previously unselected package libtool. 266s Preparing to unpack .../048-libtool_2.4.7-7build1_all.deb ... 266s Unpacking libtool (2.4.7-7build1) ... 266s Selecting previously unselected package dh-autoreconf. 266s Preparing to unpack .../049-dh-autoreconf_20_all.deb ... 266s Unpacking dh-autoreconf (20) ... 266s Selecting previously unselected package libarchive-zip-perl. 266s Preparing to unpack .../050-libarchive-zip-perl_1.68-1_all.deb ... 266s Unpacking libarchive-zip-perl (1.68-1) ... 266s Selecting previously unselected package libfile-stripnondeterminism-perl. 266s Preparing to unpack .../051-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 266s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 266s Selecting previously unselected package dh-strip-nondeterminism. 266s Preparing to unpack .../052-dh-strip-nondeterminism_1.14.0-1_all.deb ... 266s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 266s Selecting previously unselected package debugedit. 266s Preparing to unpack .../053-debugedit_1%3a5.1-1_armhf.deb ... 266s Unpacking debugedit (1:5.1-1) ... 266s Selecting previously unselected package dwz. 266s Preparing to unpack .../054-dwz_0.15-1build6_armhf.deb ... 266s Unpacking dwz (0.15-1build6) ... 266s Selecting previously unselected package gettext. 266s Preparing to unpack .../055-gettext_0.22.5-2_armhf.deb ... 266s Unpacking gettext (0.22.5-2) ... 266s Selecting previously unselected package intltool-debian. 266s Preparing to unpack .../056-intltool-debian_0.35.0+20060710.6_all.deb ... 266s Unpacking intltool-debian (0.35.0+20060710.6) ... 266s Selecting previously unselected package po-debconf. 266s Preparing to unpack .../057-po-debconf_1.0.21+nmu1_all.deb ... 266s Unpacking po-debconf (1.0.21+nmu1) ... 266s Selecting previously unselected package debhelper. 266s Preparing to unpack .../058-debhelper_13.20ubuntu1_all.deb ... 266s Unpacking debhelper (13.20ubuntu1) ... 266s Selecting previously unselected package dh-python. 266s Preparing to unpack .../059-dh-python_6.20241024_all.deb ... 266s Unpacking dh-python (6.20241024) ... 266s Selecting previously unselected package xml-core. 266s Preparing to unpack .../060-xml-core_0.19_all.deb ... 266s Unpacking xml-core (0.19) ... 266s Selecting previously unselected package docutils-common. 266s Preparing to unpack .../061-docutils-common_0.21.2+dfsg-2_all.deb ... 266s Unpacking docutils-common (0.21.2+dfsg-2) ... 266s Selecting previously unselected package fonts-lyx. 266s Preparing to unpack .../062-fonts-lyx_2.4.2.1-1_all.deb ... 266s Unpacking fonts-lyx (2.4.2.1-1) ... 266s Selecting previously unselected package libbigwig0t64:armhf. 266s Preparing to unpack .../063-libbigwig0t64_0.4.7+dfsg-3.1build2_armhf.deb ... 266s Unpacking libbigwig0t64:armhf (0.4.7+dfsg-3.1build2) ... 266s Selecting previously unselected package libblas3:armhf. 266s Preparing to unpack .../064-libblas3_3.12.0-3build2_armhf.deb ... 266s Unpacking libblas3:armhf (3.12.0-3build2) ... 266s Selecting previously unselected package libdeflate0:armhf. 266s Preparing to unpack .../065-libdeflate0_1.22-1_armhf.deb ... 266s Unpacking libdeflate0:armhf (1.22-1) ... 266s Selecting previously unselected package libgfortran5:armhf. 267s Preparing to unpack .../066-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 267s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 267s Selecting previously unselected package libgraphite2-3:armhf. 267s Preparing to unpack .../067-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 267s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 267s Selecting previously unselected package libharfbuzz0b:armhf. 267s Preparing to unpack .../068-libharfbuzz0b_10.0.1-1_armhf.deb ... 267s Unpacking libharfbuzz0b:armhf (10.0.1-1) ... 267s Selecting previously unselected package libhtscodecs2:armhf. 267s Preparing to unpack .../069-libhtscodecs2_1.6.1-1_armhf.deb ... 267s Unpacking libhtscodecs2:armhf (1.6.1-1) ... 267s Selecting previously unselected package libhts3t64:armhf. 267s Preparing to unpack .../070-libhts3t64_1.20+ds-1_armhf.deb ... 267s Unpacking libhts3t64:armhf (1.20+ds-1) ... 267s Selecting previously unselected package libimagequant0:armhf. 267s Preparing to unpack .../071-libimagequant0_2.18.0-1build1_armhf.deb ... 267s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 267s Selecting previously unselected package libjpeg-turbo8:armhf. 267s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu2_armhf.deb ... 267s Unpacking libjpeg-turbo8:armhf (2.1.5-2ubuntu2) ... 267s Selecting previously unselected package libjpeg8:armhf. 267s Preparing to unpack .../073-libjpeg8_8c-2ubuntu11_armhf.deb ... 267s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 267s Selecting previously unselected package libjs-jquery. 267s Preparing to unpack .../074-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 267s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 267s Selecting previously unselected package libjs-jquery-ui. 267s Preparing to unpack .../075-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 267s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 267s Selecting previously unselected package libjs-underscore. 267s Preparing to unpack .../076-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 267s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 267s Selecting previously unselected package libjs-sphinxdoc. 267s Preparing to unpack .../077-libjs-sphinxdoc_7.4.7-4_all.deb ... 267s Unpacking libjs-sphinxdoc (7.4.7-4) ... 267s Selecting previously unselected package libjson-perl. 267s Preparing to unpack .../078-libjson-perl_4.10000-1_all.deb ... 267s Unpacking libjson-perl (4.10000-1) ... 267s Selecting previously unselected package liblapack3:armhf. 267s Preparing to unpack .../079-liblapack3_3.12.0-3build2_armhf.deb ... 267s Unpacking liblapack3:armhf (3.12.0-3build2) ... 267s Selecting previously unselected package liblbfgsb0:armhf. 267s Preparing to unpack .../080-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 267s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 267s Selecting previously unselected package liblcms2-2:armhf. 267s Preparing to unpack .../081-liblcms2-2_2.16-2_armhf.deb ... 267s Unpacking liblcms2-2:armhf (2.16-2) ... 267s Selecting previously unselected package liblerc4:armhf. 267s Preparing to unpack .../082-liblerc4_4.0.0+ds-4ubuntu2_armhf.deb ... 267s Unpacking liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 267s Selecting previously unselected package libpython3.12t64:armhf. 267s Preparing to unpack .../083-libpython3.12t64_3.12.7-3_armhf.deb ... 267s Unpacking libpython3.12t64:armhf (3.12.7-3) ... 267s Selecting previously unselected package libpython3.13-stdlib:armhf. 267s Preparing to unpack .../084-libpython3.13-stdlib_3.13.0-2_armhf.deb ... 267s Unpacking libpython3.13-stdlib:armhf (3.13.0-2) ... 267s Selecting previously unselected package libqhull-r8.0:armhf. 268s Preparing to unpack .../085-libqhull-r8.0_2020.2-6build1_armhf.deb ... 268s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 268s Selecting previously unselected package libraqm0:armhf. 268s Preparing to unpack .../086-libraqm0_0.10.1-1build1_armhf.deb ... 268s Unpacking libraqm0:armhf (0.10.1-1build1) ... 268s Selecting previously unselected package libsharpyuv0:armhf. 268s Preparing to unpack .../087-libsharpyuv0_1.4.0-0.1_armhf.deb ... 268s Unpacking libsharpyuv0:armhf (1.4.0-0.1) ... 268s Selecting previously unselected package libjbig0:armhf. 268s Preparing to unpack .../088-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 268s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 268s Selecting previously unselected package libwebp7:armhf. 268s Preparing to unpack .../089-libwebp7_1.4.0-0.1_armhf.deb ... 268s Unpacking libwebp7:armhf (1.4.0-0.1) ... 268s Selecting previously unselected package libtiff6:armhf. 268s Preparing to unpack .../090-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 268s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 268s Selecting previously unselected package libwebpdemux2:armhf. 268s Preparing to unpack .../091-libwebpdemux2_1.4.0-0.1_armhf.deb ... 268s Unpacking libwebpdemux2:armhf (1.4.0-0.1) ... 268s Selecting previously unselected package libwebpmux3:armhf. 268s Preparing to unpack .../092-libwebpmux3_1.4.0-0.1_armhf.deb ... 268s Unpacking libwebpmux3:armhf (1.4.0-0.1) ... 268s Selecting previously unselected package libxslt1.1:armhf. 268s Preparing to unpack .../093-libxslt1.1_1.1.39-0exp1ubuntu1_armhf.deb ... 268s Unpacking libxslt1.1:armhf (1.1.39-0exp1ubuntu1) ... 268s Selecting previously unselected package pybuild-plugin-autopkgtest. 268s Preparing to unpack .../094-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 268s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 268s Selecting previously unselected package python3-packaging. 268s Preparing to unpack .../095-python3-packaging_24.1-1_all.deb ... 268s Unpacking python3-packaging (24.1-1) ... 268s Selecting previously unselected package python3-pyproject-hooks. 268s Preparing to unpack .../096-python3-pyproject-hooks_1.2.0-1_all.deb ... 268s Unpacking python3-pyproject-hooks (1.2.0-1) ... 268s Selecting previously unselected package python3-toml. 268s Preparing to unpack .../097-python3-toml_0.10.2-1_all.deb ... 268s Unpacking python3-toml (0.10.2-1) ... 268s Selecting previously unselected package python3-wheel. 268s Preparing to unpack .../098-python3-wheel_0.44.0-1_all.deb ... 268s Unpacking python3-wheel (0.44.0-1) ... 268s Selecting previously unselected package python3-build. 268s Preparing to unpack .../099-python3-build_1.2.2-1_all.deb ... 268s Unpacking python3-build (1.2.2-1) ... 268s Selecting previously unselected package python3-installer. 268s Preparing to unpack .../100-python3-installer_0.7.0+dfsg1-3_all.deb ... 268s Unpacking python3-installer (0.7.0+dfsg1-3) ... 268s Selecting previously unselected package pybuild-plugin-pyproject. 268s Preparing to unpack .../101-pybuild-plugin-pyproject_6.20241024_all.deb ... 268s Unpacking pybuild-plugin-pyproject (6.20241024) ... 268s Selecting previously unselected package python-matplotlib-data. 268s Preparing to unpack .../102-python-matplotlib-data_3.8.3-3_all.deb ... 268s Unpacking python-matplotlib-data (3.8.3-3) ... 268s Selecting previously unselected package python3.13. 268s Preparing to unpack .../103-python3.13_3.13.0-2_armhf.deb ... 268s Unpacking python3.13 (3.13.0-2) ... 268s Selecting previously unselected package python3-all. 268s Preparing to unpack .../104-python3-all_3.12.7-1_armhf.deb ... 268s Unpacking python3-all (3.12.7-1) ... 268s Selecting previously unselected package python3-appdirs. 268s Preparing to unpack .../105-python3-appdirs_1.4.4-4_all.deb ... 268s Unpacking python3-appdirs (1.4.4-4) ... 268s Selecting previously unselected package python3-brotli. 268s Preparing to unpack .../106-python3-brotli_1.1.0-2build2_armhf.deb ... 268s Unpacking python3-brotli (1.1.0-2build2) ... 268s Selecting previously unselected package python3-numpy. 268s Preparing to unpack .../107-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 268s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 269s Selecting previously unselected package python3-contourpy. 269s Preparing to unpack .../108-python3-contourpy_1.3.0-2_armhf.deb ... 269s Unpacking python3-contourpy (1.3.0-2) ... 269s Selecting previously unselected package python3-cycler. 269s Preparing to unpack .../109-python3-cycler_0.12.1-1_all.deb ... 269s Unpacking python3-cycler (0.12.1-1) ... 269s Selecting previously unselected package python3-six. 269s Preparing to unpack .../110-python3-six_1.16.0-7_all.deb ... 269s Unpacking python3-six (1.16.0-7) ... 269s Selecting previously unselected package python3-dateutil. 269s Preparing to unpack .../111-python3-dateutil_2.9.0-2_all.deb ... 269s Unpacking python3-dateutil (2.9.0-2) ... 269s Selecting previously unselected package python3-decorator. 269s Preparing to unpack .../112-python3-decorator_5.1.1-5_all.deb ... 269s Unpacking python3-decorator (5.1.1-5) ... 269s Selecting previously unselected package python3-deeptoolsintervals. 269s Preparing to unpack .../113-python3-deeptoolsintervals_0.1.9-3build9_armhf.deb ... 269s Unpacking python3-deeptoolsintervals (0.1.9-3build9) ... 269s Selecting previously unselected package libopenjp2-7:armhf. 269s Preparing to unpack .../114-libopenjp2-7_2.5.0-2ubuntu1_armhf.deb ... 269s Unpacking libopenjp2-7:armhf (2.5.0-2ubuntu1) ... 269s Selecting previously unselected package python3-pil:armhf. 269s Preparing to unpack .../115-python3-pil_10.4.0-1ubuntu1_armhf.deb ... 269s Unpacking python3-pil:armhf (10.4.0-1ubuntu1) ... 269s Selecting previously unselected package python3.12-tk. 269s Preparing to unpack .../116-python3.12-tk_3.12.7-3_armhf.deb ... 269s Unpacking python3.12-tk (3.12.7-3) ... 269s Selecting previously unselected package python3.13-tk. 269s Preparing to unpack .../117-python3.13-tk_3.13.0-2_armhf.deb ... 269s Unpacking python3.13-tk (3.13.0-2) ... 269s Selecting previously unselected package python3-tk:armhf. 269s Preparing to unpack .../118-python3-tk_3.12.7-1_armhf.deb ... 269s Unpacking python3-tk:armhf (3.12.7-1) ... 269s Selecting previously unselected package python3-pil.imagetk:armhf. 269s Preparing to unpack .../119-python3-pil.imagetk_10.4.0-1ubuntu1_armhf.deb ... 269s Unpacking python3-pil.imagetk:armhf (10.4.0-1ubuntu1) ... 269s Selecting previously unselected package python3-scipy. 269s Preparing to unpack .../120-python3-scipy_1.13.1-5_armhf.deb ... 269s Unpacking python3-scipy (1.13.1-5) ... 270s Selecting previously unselected package python3-ufolib2. 270s Preparing to unpack .../121-python3-ufolib2_0.16.1+dfsg1-1_all.deb ... 270s Unpacking python3-ufolib2 (0.16.1+dfsg1-1) ... 270s Selecting previously unselected package python3-mpmath. 270s Preparing to unpack .../122-python3-mpmath_1.3.0-1_all.deb ... 270s Unpacking python3-mpmath (1.3.0-1) ... 270s Selecting previously unselected package python3-sympy. 270s Preparing to unpack .../123-python3-sympy_1.13.3-1_all.deb ... 270s Unpacking python3-sympy (1.13.3-1) ... 270s Selecting previously unselected package python3-tz. 270s Preparing to unpack .../124-python3-tz_2024.1-2_all.deb ... 270s Unpacking python3-tz (2024.1-2) ... 270s Selecting previously unselected package python3-fs. 270s Preparing to unpack .../125-python3-fs_2.4.16-4_all.deb ... 270s Unpacking python3-fs (2.4.16-4) ... 270s Selecting previously unselected package python3-lxml:armhf. 270s Preparing to unpack .../126-python3-lxml_5.3.0-1_armhf.deb ... 270s Unpacking python3-lxml:armhf (5.3.0-1) ... 270s Selecting previously unselected package python3-lz4. 270s Preparing to unpack .../127-python3-lz4_4.0.2+dfsg-1build4_armhf.deb ... 270s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 270s Selecting previously unselected package python3-unicodedata2. 270s Preparing to unpack .../128-python3-unicodedata2_15.1.0+ds-1build1_armhf.deb ... 270s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 270s Selecting previously unselected package unicode-data. 270s Preparing to unpack .../129-unicode-data_15.1.0-1_all.deb ... 270s Unpacking unicode-data (15.1.0-1) ... 271s Selecting previously unselected package python3-fonttools. 271s Preparing to unpack .../130-python3-fonttools_4.46.0-1build2_armhf.deb ... 271s Unpacking python3-fonttools (4.46.0-1build2) ... 271s Selecting previously unselected package python3-kiwisolver. 271s Preparing to unpack .../131-python3-kiwisolver_1.4.7-2_armhf.deb ... 271s Unpacking python3-kiwisolver (1.4.7-2) ... 271s Selecting previously unselected package python3-matplotlib. 271s Preparing to unpack .../132-python3-matplotlib_3.8.3-3_armhf.deb ... 271s Unpacking python3-matplotlib (3.8.3-3) ... 271s Selecting previously unselected package python3-defusedxml. 271s Preparing to unpack .../133-python3-defusedxml_0.7.1-2_all.deb ... 271s Unpacking python3-defusedxml (0.7.1-2) ... 271s Selecting previously unselected package sphinx-common. 271s Preparing to unpack .../134-sphinx-common_7.4.7-4_all.deb ... 271s Unpacking sphinx-common (7.4.7-4) ... 271s Selecting previously unselected package python3-alabaster. 271s Preparing to unpack .../135-python3-alabaster_0.7.16-0.1_all.deb ... 271s Unpacking python3-alabaster (0.7.16-0.1) ... 271s Selecting previously unselected package 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(1.6.0-2) ... 342s Setting up python3-deeptools (3.5.5+dfsg-1) ... 343s Setting up autopkgtest-satdep (0) ... 366s (Reading database ... 87233 files and directories currently installed.) 366s Removing autopkgtest-satdep (0) ... 372s autopkgtest [22:23:25]: test pybuild-autopkgtest: pybuild-autopkgtest 372s autopkgtest [22:23:25]: test pybuild-autopkgtest: [----------------------- 374s pybuild-autopkgtest 375s I: pybuild base:311: cd /tmp/autopkgtest.4ddmNn/autopkgtest_tmp/build; python3.13 -m pytest -v /tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/ 375s ============================= test session starts ============================== 375s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.13 375s cachedir: .pytest_cache 375s rootdir: /tmp/autopkgtest.4ddmNn/build.6vg/src 375s configfile: pyproject.toml 375s plugins: typeguard-4.4.1 376s collecting ... collected 1 item / 10 errors 376s 376s ==================================== ERRORS ==================================== 376s ______ ERROR collecting deeptools/test/test_bamCoverage_and_bamCompare.py ______ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_bamCoverage_and_bamCompare.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_bamCoverage_and_bamCompare.py:1: in 376s import deeptools.bamCoverage as bam_cov 376s ../../build.6vg/src/deeptools/bamCoverage.py:7: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s ____________ ERROR collecting deeptools/test/test_bigwigAverage.py _____________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_bigwigAverage.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_bigwigAverage.py:1: in 376s import deeptools.bigwigAverage as bwAve 376s ../../build.6vg/src/deeptools/bigwigAverage.py:5: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s _ ERROR collecting deeptools/test/test_bigwigCompare_and_multiBigwigSummary.py _ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_bigwigCompare_and_multiBigwigSummary.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_bigwigCompare_and_multiBigwigSummary.py:1: in 376s import deeptools.bigwigCompare as bwComp 376s ../../build.6vg/src/deeptools/bigwigCompare.py:5: in 376s from deeptools.getRatio import getRatio 376s ../../build.6vg/src/deeptools/getRatio.py:1: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s _______ ERROR collecting deeptools/test/test_computeMatrixOperations.py ________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_computeMatrixOperations.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_computeMatrixOperations.py:3: in 376s import deeptools.computeMatrixOperations as cmo 376s ../../build.6vg/src/deeptools/computeMatrixOperations.py:2: in 376s import deeptools.heatmapper as heatmapper 376s ../../build.6vg/src/deeptools/heatmapper.py:4: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s ___________ ERROR collecting deeptools/test/test_countReadsPerBin.py ___________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_countReadsPerBin.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_countReadsPerBin.py:3: in 376s import deeptools.countReadsPerBin as cr 376s ../../build.6vg/src/deeptools/countReadsPerBin.py:6: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s ______________ ERROR collecting deeptools/test/test_heatmapper.py ______________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_heatmapper.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_heatmapper.py:4: in 376s import deeptools.computeMatrix 376s ../../build.6vg/src/deeptools/computeMatrix.py:8: in 376s from deeptools import heatmapper 376s ../../build.6vg/src/deeptools/heatmapper.py:4: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s ___________ ERROR collecting deeptools/test/test_multiBamSummary.py ____________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_multiBamSummary.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_multiBamSummary.py:1: in 376s import deeptools.multiBamSummary as mbs 376s ../../build.6vg/src/deeptools/multiBamSummary.py:7: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s _____________ ERROR collecting deeptools/test/test_plotCoverage.py _____________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_plotCoverage.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_plotCoverage.py:3: in 376s from matplotlib.testing.compare import compare_images 376s /usr/lib/python3/dist-packages/matplotlib/__init__.py:156: in 376s import numpy 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s ____________ ERROR collecting deeptools/test/test_readFiltering.py _____________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_readFiltering.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_readFiltering.py:1: in 376s import deeptools.estimateReadFiltering as est 376s ../../build.6vg/src/deeptools/estimateReadFiltering.py:5: in 376s from deeptools import parserCommon, bamHandler, utilities 376s ../../build.6vg/src/deeptools/bamHandler.py:2: in 376s import pysam 376s /usr/lib/python3/dist-packages/pysam/__init__.py:4: in 376s from pysam.libchtslib import * 376s E ModuleNotFoundError: No module named 'pysam.libchtslib' 376s ____________ ERROR collecting deeptools/test/test_writeBedGraph.py _____________ 376s ImportError while importing test module '/tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/test/test_writeBedGraph.py'. 376s Hint: make sure your test modules/packages have valid Python names. 376s Traceback: 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 376s from . import multiarray 376s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 376s from . import overrides 376s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 376s from numpy.core._multiarray_umath import ( 376s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 376s 376s During handling of the above exception, another exception occurred: 376s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 376s from numpy.__config__ import show as show_config 376s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 376s from numpy.core._multiarray_umath import ( 376s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 376s raise ImportError(msg) 376s E ImportError: 376s E 376s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 376s E 376s E Importing the numpy C-extensions failed. This error can happen for 376s E many reasons, often due to issues with your setup or how NumPy was 376s E installed. 376s E 376s E We have compiled some common reasons and troubleshooting tips at: 376s E 376s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 376s E 376s E Please note and check the following: 376s E 376s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 376s E * The NumPy version is: "1.26.4" 376s E 376s E and make sure that they are the versions you expect. 376s E Please carefully study the documentation linked above for further help. 376s E 376s E Original error was: No module named 'numpy.core._multiarray_umath' 376s 376s The above exception was the direct cause of the following exception: 376s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 376s return _bootstrap._gcd_import(name[level:], package, level) 376s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py:3: in 376s import deeptools.writeBedGraph as wr 376s ../../build.6vg/src/deeptools/writeBedGraph.py:4: in 376s import numpy as np 376s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 376s raise ImportError(msg) from e 376s E ImportError: Error importing numpy: you should not try to import numpy from 376s E its source directory; please exit the numpy source tree, and relaunch 376s E your python interpreter from there. 376s =========================== short test summary info ============================ 376s ERROR ../../build.6vg/src/deeptools/test/test_bamCoverage_and_bamCompare.py 376s ERROR ../../build.6vg/src/deeptools/test/test_bigwigAverage.py 376s ERROR ../../build.6vg/src/deeptools/test/test_bigwigCompare_and_multiBigwigSummary.py 376s ERROR ../../build.6vg/src/deeptools/test/test_computeMatrixOperations.py 376s ERROR ../../build.6vg/src/deeptools/test/test_countReadsPerBin.py 376s ERROR ../../build.6vg/src/deeptools/test/test_heatmapper.py 376s ERROR ../../build.6vg/src/deeptools/test/test_multiBamSummary.py 376s ERROR ../../build.6vg/src/deeptools/test/test_plotCoverage.py 376s ERROR ../../build.6vg/src/deeptools/test/test_readFiltering.py 376s ERROR ../../build.6vg/src/deeptools/test/test_writeBedGraph.py 376s !!!!!!!!!!!!!!!!!!! Interrupted: 10 errors during collection !!!!!!!!!!!!!!!!!!! 376s ============================== 10 errors in 0.74s ============================== 376s E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd /tmp/autopkgtest.4ddmNn/autopkgtest_tmp/build; python3.13 -m pytest -v /tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/ 376s I: pybuild base:311: cd /tmp/autopkgtest.4ddmNn/autopkgtest_tmp/build; python3.12 -m pytest -v /tmp/autopkgtest.4ddmNn/build.6vg/src/deeptools/ 376s ============================= test session starts ============================== 376s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 -- /usr/bin/python3.12 376s cachedir: .pytest_cache 376s rootdir: /tmp/autopkgtest.4ddmNn/build.6vg/src 376s configfile: pyproject.toml 376s plugins: typeguard-4.4.1 377s collecting ... collected 100 items 377s 377s ../../build.6vg/src/deeptools/test/test_bamCoverage_and_bamCompare.py::test_bam_coverage_arguments PASSED [ 1%] 377s 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394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_scaling[bam] PASSED [ 93%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_scaling[cram] PASSED [ 94%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_ignore_duplicates[bam] PASSED [ 95%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_ignore_duplicates[cram] PASSED [ 96%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_smoothing[bam] PASSED [ 97%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_worker_smoothing[cram] PASSED [ 98%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[bam] PASSED [ 99%] 394s ../../build.6vg/src/deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[cram] PASSED [100%] 394s 394s ======================== 99 passed, 1 skipped in 18.35s ======================== 395s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 395s make: *** [/tmp/ocOA3Koq2n/run:4: pybuild-autopkgtest] Error 25 395s pybuild-autopkgtest: error: /tmp/ocOA3Koq2n/run pybuild-autopkgtest returned exit code 2 395s autopkgtest [22:23:48]: test pybuild-autopkgtest: -----------------------] 399s pybuild-autopkgtest FAIL non-zero exit status 25 399s autopkgtest [22:23:52]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 403s autopkgtest [22:23:56]: @@@@@@@@@@@@@@@@@@@@ summary 403s pybuild-autopkgtest FAIL non-zero exit status 25