0s autopkgtest [21:38:38]: starting date and time: 2024-11-13 21:38:38+0000 0s autopkgtest [21:38:38]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [21:38:38]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.839qa5lt/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-bx --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.7-1 python3-stdlib-extensions/3.12.7-1' -- lxd -r lxd-armhf-10.145.243.76 lxd-armhf-10.145.243.76:autopkgtest/ubuntu/plucky/armhf 54s autopkgtest [21:39:32]: testbed dpkg architecture: armhf 56s autopkgtest [21:39:34]: testbed apt version: 2.9.8 56s autopkgtest [21:39:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 64s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 64s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [17.2 kB] 64s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 64s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 65s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [970 kB] 65s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [104 kB] 65s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [662 kB] 65s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [17.2 kB] 65s Fetched 1951 kB in 1s (2087 kB/s) 65s Reading package lists... 82s tee: /proc/self/fd/2: Permission denied 104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 104s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [213 kB] 104s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 104s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 104s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [974 kB] 104s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [666 kB] 104s Get:7 http://ftpmaster.internal/ubuntu plucky/universe Sources [20.7 MB] 105s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [14.7 MB] 108s Fetched 37.4 MB in 5s (7924 kB/s) 109s Reading package lists... 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 111s Calculating upgrade... 111s The following NEW packages will be installed: 111s python3.13-gdbm 111s The following packages will be upgraded: 111s libgnutls30t64 libjson-glib-1.0-0 libjson-glib-1.0-common libnewt0.52 111s libpython3-stdlib libutempter0 python3 python3-gdbm python3-minimal 111s python3-newt whiptail 111s 11 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 111s Need to get 1207 kB of archives. 111s After this operation, 124 kB of additional disk space will be used. 111s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-minimal armhf 3.12.7-1 [27.4 kB] 111s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3 armhf 3.12.7-1 [24.0 kB] 111s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-stdlib armhf 3.12.7-1 [10.0 kB] 111s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgnutls30t64 armhf 3.8.8-2ubuntu1 [955 kB] 112s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-newt armhf 0.52.24-2ubuntu4 [19.7 kB] 112s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libnewt0.52 armhf 0.52.24-2ubuntu4 [39.2 kB] 112s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf whiptail armhf 0.52.24-2ubuntu4 [17.2 kB] 112s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-gdbm armhf 3.13.0-2 [29.5 kB] 112s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-gdbm armhf 3.12.7-1 [8642 B] 112s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-common all 1.10.0+ds-3 [5586 B] 112s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-glib-1.0-0 armhf 1.10.0+ds-3 [61.7 kB] 112s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf libutempter0 armhf 1.2.1-4 [9062 B] 112s Fetched 1207 kB in 1s (2211 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 112s Preparing to unpack .../python3-minimal_3.12.7-1_armhf.deb ... 112s Unpacking python3-minimal (3.12.7-1) over (3.12.6-0ubuntu1) ... 112s Setting up python3-minimal (3.12.7-1) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 113s Preparing to unpack .../python3_3.12.7-1_armhf.deb ... 113s Unpacking python3 (3.12.7-1) over (3.12.6-0ubuntu1) ... 113s Preparing to unpack .../libpython3-stdlib_3.12.7-1_armhf.deb ... 113s Unpacking libpython3-stdlib:armhf (3.12.7-1) over (3.12.6-0ubuntu1) ... 113s Preparing to unpack .../libgnutls30t64_3.8.8-2ubuntu1_armhf.deb ... 113s Unpacking libgnutls30t64:armhf (3.8.8-2ubuntu1) over (3.8.6-2ubuntu1) ... 113s Setting up libgnutls30t64:armhf (3.8.8-2ubuntu1) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59559 files and directories currently installed.) 113s Preparing to unpack .../0-python3-newt_0.52.24-2ubuntu4_armhf.deb ... 113s Unpacking python3-newt:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 113s Preparing to unpack .../1-libnewt0.52_0.52.24-2ubuntu4_armhf.deb ... 113s Unpacking libnewt0.52:armhf (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 113s Preparing to unpack .../2-whiptail_0.52.24-2ubuntu4_armhf.deb ... 113s Unpacking whiptail (0.52.24-2ubuntu4) over (0.52.24-2ubuntu3) ... 113s Selecting previously unselected package python3.13-gdbm. 113s Preparing to unpack .../3-python3.13-gdbm_3.13.0-2_armhf.deb ... 113s Unpacking python3.13-gdbm (3.13.0-2) ... 113s Preparing to unpack .../4-python3-gdbm_3.12.7-1_armhf.deb ... 113s Unpacking python3-gdbm:armhf (3.12.7-1) over (3.12.6-1ubuntu1) ... 113s Preparing to unpack .../5-libjson-glib-1.0-common_1.10.0+ds-3_all.deb ... 113s Unpacking libjson-glib-1.0-common (1.10.0+ds-3) over (1.10.0+ds-2) ... 113s Preparing to unpack .../6-libjson-glib-1.0-0_1.10.0+ds-3_armhf.deb ... 113s Unpacking libjson-glib-1.0-0:armhf (1.10.0+ds-3) over (1.10.0+ds-2) ... 113s Preparing to unpack .../7-libutempter0_1.2.1-4_armhf.deb ... 113s Unpacking libutempter0:armhf (1.2.1-4) over (1.2.1-3build1) ... 113s Setting up libnewt0.52:armhf (0.52.24-2ubuntu4) ... 113s Setting up libutempter0:armhf (1.2.1-4) ... 113s Setting up whiptail (0.52.24-2ubuntu4) ... 113s Setting up libjson-glib-1.0-common (1.10.0+ds-3) ... 113s Setting up python3.13-gdbm (3.13.0-2) ... 113s Setting up libpython3-stdlib:armhf (3.12.7-1) ... 113s Setting up python3 (3.12.7-1) ... 114s Setting up python3-newt:armhf (0.52.24-2ubuntu4) ... 114s Setting up libjson-glib-1.0-0:armhf (1.10.0+ds-3) ... 114s Setting up python3-gdbm:armhf (3.12.7-1) ... 114s Processing triggers for man-db (2.12.1-3) ... 114s Processing triggers for libc-bin (2.40-1ubuntu3) ... 115s Reading package lists... 115s Building dependency tree... 115s Reading state information... 116s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s autopkgtest [21:40:36]: rebooting testbed after setup commands that affected boot 188s autopkgtest [21:41:46]: testbed running kernel: Linux 6.8.0-48-generic #48~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Mon Oct 7 11:49:53 UTC 2 217s autopkgtest [21:42:15]: @@@@@@@@@@@@@@@@@@@@ apt-source python-bx 228s Get:1 http://ftpmaster.internal/ubuntu plucky/universe python-bx 0.13.0-1 (dsc) [2278 B] 228s Get:2 http://ftpmaster.internal/ubuntu plucky/universe python-bx 0.13.0-1 (tar) [1612 kB] 228s Get:3 http://ftpmaster.internal/ubuntu plucky/universe python-bx 0.13.0-1 (diff) [13.8 kB] 228s gpgv: Signature made Sun Sep 22 12:26:19 2024 UTC 228s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 228s gpgv: issuer "tchet@debian.org" 228s gpgv: Can't check signature: No public key 228s dpkg-source: warning: cannot verify inline signature for ./python-bx_0.13.0-1.dsc: no acceptable signature found 229s autopkgtest [21:42:27]: testing package python-bx version 0.13.0-1 232s autopkgtest [21:42:30]: build not needed 235s autopkgtest [21:42:33]: test pybuild-autopkgtest: preparing testbed 244s Reading package lists... 245s Building dependency tree... 245s Reading state information... 245s Starting pkgProblemResolver with broken count: 0 245s Starting 2 pkgProblemResolver with broken count: 0 245s Done 246s The following additional packages will be installed: 246s autoconf automake autopoint autotools-dev build-essential cpp cpp-14 246s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cython3 debhelper 246s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ g++-14 246s g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 246s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext intltool-debian 246s libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev libcc1-0 246s libcrypt-dev libdebhelper-perl libexpat1-dev 246s libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgomp1 246s libisl23 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 libmpc3 246s libpython3-all-dev libpython3-dev libpython3.12-dev libpython3.12t64 246s libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib 246s libstdc++-14-dev libtool libubsan1 linux-libc-dev m4 po-debconf 246s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-all 246s python3-all-dev python3-build python3-bx python3-dev python3-iniconfig 246s python3-installer python3-lzo python3-numpy python3-packaging python3-pluggy 246s python3-pyproject-hooks python3-pytest python3-pytest-cython python3-toml 246s python3-wheel python3.12-dev python3.13 python3.13-dev python3.13-minimal 246s rpcsvc-proto zlib1g-dev 246s Suggested packages: 246s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-14-locales 246s cpp-14-doc cython-doc dh-make flit gcc-14-doc gcc-multilib manpages-dev flex 246s bison gdb gcc-doc gdb-arm-linux-gnueabihf gettext-doc libasprintf-dev 246s libgettextpo-dev libc-devtools glibc-doc libstdc++-14-doc libtool-doc 246s gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python3-pip 246s python3-venv python-build-doc python-installer-doc gfortran python-numpy-doc 246s python3.13-venv python3.13-doc binfmt-support 246s Recommended packages: 246s manpages manpages-dev libarchive-cpio-perl javascript-common libltdl-dev 246s libmail-sendmail-perl 246s The following NEW packages will be installed: 246s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 246s cpp cpp-14 cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cython3 246s debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz g++ 246s g++-14 g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-14 246s gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext intltool-debian 246s libarchive-zip-perl libasan8 libblas3 libc-dev-bin libc6-dev libcc1-0 246s libcrypt-dev libdebhelper-perl libexpat1-dev 246s libfile-stripnondeterminism-perl libgcc-14-dev libgfortran5 libgomp1 246s libisl23 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 libmpc3 246s libpython3-all-dev libpython3-dev libpython3.12-dev libpython3.12t64 246s libpython3.13 libpython3.13-dev libpython3.13-minimal libpython3.13-stdlib 246s libstdc++-14-dev libtool libubsan1 linux-libc-dev m4 po-debconf 246s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python3-all 246s python3-all-dev python3-build python3-bx python3-dev python3-iniconfig 246s python3-installer python3-lzo python3-numpy python3-packaging python3-pluggy 246s python3-pyproject-hooks python3-pytest python3-pytest-cython python3-toml 246s python3-wheel python3.12-dev python3.13 python3.13-dev python3.13-minimal 246s rpcsvc-proto zlib1g-dev 246s 0 upgraded, 84 newly installed, 0 to remove and 0 not upgraded. 246s Need to get 84.8 MB/84.8 MB of archives. 246s After this operation, 261 MB of additional disk space will be used. 246s Get:1 /tmp/autopkgtest.LV8W0i/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [840 B] 246s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-minimal armhf 3.13.0-2 [866 kB] 247s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-minimal armhf 3.13.0-2 [1854 kB] 247s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-4build1 [235 kB] 247s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3 [382 kB] 247s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 247s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] 248s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.22.5-2 [616 kB] 248s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libc-dev-bin armhf 2.40-1ubuntu3 [19.2 kB] 248s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.11.0-8.8 [1628 kB] 248s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] 248s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 248s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libc6-dev armhf 2.40-1ubuntu3 [1370 kB] 248s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 248s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 248s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [9219 kB] 249s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-8ubuntu1 [1032 B] 249s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [5464 B] 249s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.1.0-2ubuntu1 [22.4 kB] 249s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 14.2.0-8ubuntu1 [43.3 kB] 249s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 14.2.0-8ubuntu1 [125 kB] 249s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 14.2.0-8ubuntu1 [2901 kB] 249s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 14.2.0-8ubuntu1 [1150 kB] 249s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-8ubuntu1 [897 kB] 249s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [18.0 MB] 250s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-8ubuntu1 [498 kB] 250s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [1222 B] 250s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.1.0-2ubuntu1 [5002 B] 250s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-8ubuntu1 [2569 kB] 250s Get:30 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-8ubuntu1 [10.5 MB] 251s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-8ubuntu1 [19.9 kB] 251s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.1.0-2ubuntu1 [968 B] 251s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.1.0-2ubuntu1 [1084 B] 251s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 251s Get:35 http://ftpmaster.internal/ubuntu plucky/universe armhf cython3 armhf 3.0.11+dfsg-1ubuntu1 [2391 kB] 251s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.20ubuntu1 [94.2 kB] 251s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.4.7-7build1 [166 kB] 251s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 251s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 251s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 251s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.0-1 [5058 B] 251s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-1 [46.5 kB] 251s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 251s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.22.5-2 [995 kB] 251s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 251s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 251s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.20ubuntu1 [893 kB] 251s Get:48 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20241024 [112 kB] 251s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.0-3build2 [126 kB] 251s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf libexpat1-dev armhf 2.6.2-2 [121 kB] 251s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 14.2.0-8ubuntu1 [311 kB] 251s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 251s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 251s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] 251s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.0-3build2 [2086 kB] 251s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.12t64 armhf 3.12.7-3 [2075 kB] 251s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 251s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.12-dev armhf 3.12.7-3 [4344 kB] 251s Get:59 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-dev armhf 3.12.7-1 [10.3 kB] 251s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-stdlib armhf 3.13.0-2 [1972 kB] 251s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.0-2 [2045 kB] 251s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-dev armhf 3.13.0-2 [4254 kB] 251s Get:63 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libpython3-all-dev armhf 3.12.7-1 [916 B] 251s Get:64 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-autopkgtest all 6.20241024 [1746 B] 251s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf python3-packaging all 24.1-1 [41.4 kB] 251s Get:66 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 251s Get:67 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 251s Get:68 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.44.0-1 [54.2 kB] 251s Get:69 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 251s Get:70 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 251s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20241024 [1728 B] 252s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13 armhf 3.13.0-2 [719 kB] 252s Get:73 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all armhf 3.12.7-1 [890 B] 252s Get:74 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-dev armhf 3.12.7-3 [505 kB] 252s Get:75 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-dev armhf 3.12.7-1 [26.7 kB] 252s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-dev armhf 3.13.0-2 [507 kB] 252s Get:77 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf python3-all-dev armhf 3.12.7-1 [914 B] 252s Get:78 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-lzo armhf 1.15-2 [8286 B] 252s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:1.26.4+ds-11build1 [3570 kB] 252s Get:80 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-bx armhf 0.13.0-1 [699 kB] 252s Get:81 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 252s Get:82 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 252s Get:83 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.3-1 [251 kB] 252s Get:84 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest-cython all 0.3.1-1 [7270 B] 252s Fetched 84.8 MB in 6s (15.0 MB/s) 252s Selecting previously unselected package libpython3.13-minimal:armhf. 252s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 59567 files and directories currently installed.) 252s Preparing to unpack .../00-libpython3.13-minimal_3.13.0-2_armhf.deb ... 252s Unpacking libpython3.13-minimal:armhf (3.13.0-2) ... 252s Selecting previously unselected package python3.13-minimal. 252s Preparing to unpack .../01-python3.13-minimal_3.13.0-2_armhf.deb ... 252s Unpacking python3.13-minimal (3.13.0-2) ... 253s Selecting previously unselected package m4. 253s Preparing to unpack .../02-m4_1.4.19-4build1_armhf.deb ... 253s Unpacking m4 (1.4.19-4build1) ... 253s Selecting previously unselected package autoconf. 253s Preparing to unpack .../03-autoconf_2.72-3_all.deb ... 253s Unpacking autoconf (2.72-3) ... 253s Selecting previously unselected package autotools-dev. 253s Preparing to unpack .../04-autotools-dev_20220109.1_all.deb ... 253s Unpacking autotools-dev (20220109.1) ... 253s Selecting previously unselected package automake. 253s Preparing to unpack .../05-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 253s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 253s Selecting previously unselected package autopoint. 253s Preparing to unpack .../06-autopoint_0.22.5-2_all.deb ... 253s Unpacking autopoint (0.22.5-2) ... 253s Selecting previously unselected package libc-dev-bin. 253s Preparing to unpack .../07-libc-dev-bin_2.40-1ubuntu3_armhf.deb ... 253s Unpacking libc-dev-bin (2.40-1ubuntu3) ... 253s Selecting previously unselected package linux-libc-dev:armhf. 253s Preparing to unpack .../08-linux-libc-dev_6.11.0-8.8_armhf.deb ... 253s Unpacking linux-libc-dev:armhf (6.11.0-8.8) ... 253s Selecting previously unselected package libcrypt-dev:armhf. 253s Preparing to unpack .../09-libcrypt-dev_1%3a4.4.36-4build1_armhf.deb ... 253s Unpacking libcrypt-dev:armhf (1:4.4.36-4build1) ... 253s Selecting previously unselected package rpcsvc-proto. 253s Preparing to unpack .../10-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 253s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 253s Selecting previously unselected package libc6-dev:armhf. 253s Preparing to unpack .../11-libc6-dev_2.40-1ubuntu3_armhf.deb ... 253s Unpacking libc6-dev:armhf (2.40-1ubuntu3) ... 253s Selecting previously unselected package libisl23:armhf. 253s Preparing to unpack .../12-libisl23_0.27-1_armhf.deb ... 253s Unpacking libisl23:armhf (0.27-1) ... 253s Selecting previously unselected package libmpc3:armhf. 253s Preparing to unpack .../13-libmpc3_1.3.1-1build2_armhf.deb ... 253s Unpacking libmpc3:armhf (1.3.1-1build2) ... 253s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 253s Preparing to unpack .../14-cpp-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 253s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package cpp-14. 254s Preparing to unpack .../15-cpp-14_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking cpp-14 (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package cpp-arm-linux-gnueabihf. 254s Preparing to unpack .../16-cpp-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 254s Unpacking cpp-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 254s Selecting previously unselected package cpp. 254s Preparing to unpack .../17-cpp_4%3a14.1.0-2ubuntu1_armhf.deb ... 254s Unpacking cpp (4:14.1.0-2ubuntu1) ... 254s Selecting previously unselected package libcc1-0:armhf. 254s Preparing to unpack .../18-libcc1-0_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking libcc1-0:armhf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package libgomp1:armhf. 254s Preparing to unpack .../19-libgomp1_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking libgomp1:armhf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package libasan8:armhf. 254s Preparing to unpack .../20-libasan8_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking libasan8:armhf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package libubsan1:armhf. 254s Preparing to unpack .../21-libubsan1_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking libubsan1:armhf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package libgcc-14-dev:armhf. 254s Preparing to unpack .../22-libgcc-14-dev_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking libgcc-14-dev:armhf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 254s Preparing to unpack .../23-gcc-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 254s Selecting previously unselected package gcc-14. 254s Preparing to unpack .../24-gcc-14_14.2.0-8ubuntu1_armhf.deb ... 254s Unpacking gcc-14 (14.2.0-8ubuntu1) ... 255s Selecting previously unselected package gcc-arm-linux-gnueabihf. 255s Preparing to unpack .../25-gcc-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 255s Unpacking gcc-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 255s Selecting previously unselected package gcc. 255s Preparing to unpack .../26-gcc_4%3a14.1.0-2ubuntu1_armhf.deb ... 255s Unpacking gcc (4:14.1.0-2ubuntu1) ... 255s Selecting previously unselected package libstdc++-14-dev:armhf. 255s Preparing to unpack .../27-libstdc++-14-dev_14.2.0-8ubuntu1_armhf.deb ... 255s Unpacking libstdc++-14-dev:armhf (14.2.0-8ubuntu1) ... 255s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 255s Preparing to unpack .../28-g++-14-arm-linux-gnueabihf_14.2.0-8ubuntu1_armhf.deb ... 255s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-8ubuntu1) ... 255s Selecting previously unselected package g++-14. 255s Preparing to unpack .../29-g++-14_14.2.0-8ubuntu1_armhf.deb ... 255s Unpacking g++-14 (14.2.0-8ubuntu1) ... 255s Selecting previously unselected package g++-arm-linux-gnueabihf. 255s Preparing to unpack .../30-g++-arm-linux-gnueabihf_4%3a14.1.0-2ubuntu1_armhf.deb ... 255s Unpacking g++-arm-linux-gnueabihf (4:14.1.0-2ubuntu1) ... 255s Selecting previously unselected package g++. 255s Preparing to unpack .../31-g++_4%3a14.1.0-2ubuntu1_armhf.deb ... 255s Unpacking g++ (4:14.1.0-2ubuntu1) ... 255s Selecting previously unselected package build-essential. 255s Preparing to unpack .../32-build-essential_12.10ubuntu1_armhf.deb ... 255s Unpacking build-essential (12.10ubuntu1) ... 255s Selecting previously unselected package cython3. 255s Preparing to unpack .../33-cython3_3.0.11+dfsg-1ubuntu1_armhf.deb ... 255s Unpacking cython3 (3.0.11+dfsg-1ubuntu1) ... 255s Selecting previously unselected package libdebhelper-perl. 255s Preparing to unpack .../34-libdebhelper-perl_13.20ubuntu1_all.deb ... 255s Unpacking libdebhelper-perl (13.20ubuntu1) ... 255s Selecting previously unselected package libtool. 255s Preparing to unpack .../35-libtool_2.4.7-7build1_all.deb ... 255s Unpacking libtool (2.4.7-7build1) ... 255s Selecting previously unselected package dh-autoreconf. 255s Preparing to unpack .../36-dh-autoreconf_20_all.deb ... 255s Unpacking dh-autoreconf (20) ... 255s Selecting previously unselected package libarchive-zip-perl. 255s Preparing to unpack .../37-libarchive-zip-perl_1.68-1_all.deb ... 255s Unpacking libarchive-zip-perl (1.68-1) ... 255s Selecting previously unselected package libfile-stripnondeterminism-perl. 255s Preparing to unpack .../38-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 255s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 255s Selecting previously unselected package dh-strip-nondeterminism. 256s Preparing to unpack .../39-dh-strip-nondeterminism_1.14.0-1_all.deb ... 256s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 256s Selecting previously unselected package debugedit. 256s Preparing to unpack .../40-debugedit_1%3a5.1-1_armhf.deb ... 256s Unpacking debugedit (1:5.1-1) ... 256s Selecting previously unselected package dwz. 256s Preparing to unpack .../41-dwz_0.15-1build6_armhf.deb ... 256s Unpacking dwz (0.15-1build6) ... 256s Selecting previously unselected package gettext. 256s Preparing to unpack .../42-gettext_0.22.5-2_armhf.deb ... 256s Unpacking gettext (0.22.5-2) ... 256s Selecting previously unselected package intltool-debian. 256s Preparing to unpack .../43-intltool-debian_0.35.0+20060710.6_all.deb ... 256s Unpacking intltool-debian (0.35.0+20060710.6) ... 256s Selecting previously unselected package po-debconf. 256s Preparing to unpack .../44-po-debconf_1.0.21+nmu1_all.deb ... 256s Unpacking po-debconf (1.0.21+nmu1) ... 256s Selecting previously unselected package debhelper. 256s Preparing to unpack .../45-debhelper_13.20ubuntu1_all.deb ... 256s Unpacking debhelper (13.20ubuntu1) ... 256s Selecting previously unselected package dh-python. 256s Preparing to unpack .../46-dh-python_6.20241024_all.deb ... 256s Unpacking dh-python (6.20241024) ... 256s Selecting previously unselected package libblas3:armhf. 256s Preparing to unpack .../47-libblas3_3.12.0-3build2_armhf.deb ... 256s Unpacking libblas3:armhf (3.12.0-3build2) ... 256s Selecting previously unselected package libexpat1-dev:armhf. 256s Preparing to unpack .../48-libexpat1-dev_2.6.2-2_armhf.deb ... 256s Unpacking libexpat1-dev:armhf (2.6.2-2) ... 256s Selecting previously unselected package libgfortran5:armhf. 256s Preparing to unpack .../49-libgfortran5_14.2.0-8ubuntu1_armhf.deb ... 256s Unpacking libgfortran5:armhf (14.2.0-8ubuntu1) ... 256s Selecting previously unselected package libjs-jquery. 256s Preparing to unpack .../50-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 256s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 256s Selecting previously unselected package libjs-underscore. 256s Preparing to unpack .../51-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 256s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 256s Selecting previously unselected package libjs-sphinxdoc. 256s Preparing to unpack .../52-libjs-sphinxdoc_7.4.7-4_all.deb ... 256s Unpacking libjs-sphinxdoc (7.4.7-4) ... 256s Selecting previously unselected package liblapack3:armhf. 256s Preparing to unpack .../53-liblapack3_3.12.0-3build2_armhf.deb ... 256s Unpacking liblapack3:armhf (3.12.0-3build2) ... 256s Selecting previously unselected package libpython3.12t64:armhf. 256s Preparing to unpack .../54-libpython3.12t64_3.12.7-3_armhf.deb ... 256s Unpacking libpython3.12t64:armhf (3.12.7-3) ... 256s Selecting previously unselected package zlib1g-dev:armhf. 256s Preparing to unpack .../55-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 256s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 256s Selecting previously unselected package libpython3.12-dev:armhf. 256s Preparing to unpack .../56-libpython3.12-dev_3.12.7-3_armhf.deb ... 256s Unpacking libpython3.12-dev:armhf (3.12.7-3) ... 256s Selecting previously unselected package libpython3-dev:armhf. 256s Preparing to unpack .../57-libpython3-dev_3.12.7-1_armhf.deb ... 256s Unpacking libpython3-dev:armhf (3.12.7-1) ... 256s Selecting previously unselected package libpython3.13-stdlib:armhf. 256s Preparing to unpack .../58-libpython3.13-stdlib_3.13.0-2_armhf.deb ... 256s Unpacking libpython3.13-stdlib:armhf (3.13.0-2) ... 257s Selecting previously unselected package libpython3.13:armhf. 257s Preparing to unpack .../59-libpython3.13_3.13.0-2_armhf.deb ... 257s Unpacking libpython3.13:armhf (3.13.0-2) ... 257s Selecting previously unselected package libpython3.13-dev:armhf. 257s Preparing to unpack .../60-libpython3.13-dev_3.13.0-2_armhf.deb ... 257s Unpacking libpython3.13-dev:armhf (3.13.0-2) ... 257s Selecting previously unselected package libpython3-all-dev:armhf. 257s Preparing to unpack .../61-libpython3-all-dev_3.12.7-1_armhf.deb ... 257s Unpacking libpython3-all-dev:armhf (3.12.7-1) ... 257s Selecting previously unselected package pybuild-plugin-autopkgtest. 257s Preparing to unpack .../62-pybuild-plugin-autopkgtest_6.20241024_all.deb ... 257s Unpacking pybuild-plugin-autopkgtest (6.20241024) ... 257s Selecting previously unselected package python3-packaging. 257s Preparing to unpack .../63-python3-packaging_24.1-1_all.deb ... 257s Unpacking python3-packaging (24.1-1) ... 257s Selecting previously unselected package python3-pyproject-hooks. 257s Preparing to unpack .../64-python3-pyproject-hooks_1.2.0-1_all.deb ... 257s Unpacking python3-pyproject-hooks (1.2.0-1) ... 257s Selecting previously unselected package python3-toml. 257s Preparing to unpack .../65-python3-toml_0.10.2-1_all.deb ... 257s Unpacking python3-toml (0.10.2-1) ... 257s Selecting previously unselected package python3-wheel. 257s Preparing to unpack .../66-python3-wheel_0.44.0-1_all.deb ... 257s Unpacking python3-wheel (0.44.0-1) ... 257s Selecting previously unselected package python3-build. 257s Preparing to unpack .../67-python3-build_1.2.2-1_all.deb ... 257s Unpacking python3-build (1.2.2-1) ... 257s Selecting previously unselected package python3-installer. 257s Preparing to unpack .../68-python3-installer_0.7.0+dfsg1-3_all.deb ... 257s Unpacking python3-installer (0.7.0+dfsg1-3) ... 257s Selecting previously unselected package pybuild-plugin-pyproject. 257s Preparing to unpack .../69-pybuild-plugin-pyproject_6.20241024_all.deb ... 257s Unpacking pybuild-plugin-pyproject (6.20241024) ... 257s Selecting previously unselected package python3.13. 257s Preparing to unpack .../70-python3.13_3.13.0-2_armhf.deb ... 257s Unpacking python3.13 (3.13.0-2) ... 257s Selecting previously unselected package python3-all. 257s Preparing to unpack .../71-python3-all_3.12.7-1_armhf.deb ... 257s Unpacking python3-all (3.12.7-1) ... 257s Selecting previously unselected package python3.12-dev. 257s Preparing to unpack .../72-python3.12-dev_3.12.7-3_armhf.deb ... 257s Unpacking python3.12-dev (3.12.7-3) ... 257s Selecting previously unselected package python3-dev. 257s Preparing to unpack .../73-python3-dev_3.12.7-1_armhf.deb ... 257s Unpacking python3-dev (3.12.7-1) ... 257s Selecting previously unselected package python3.13-dev. 257s Preparing to unpack .../74-python3.13-dev_3.13.0-2_armhf.deb ... 257s Unpacking python3.13-dev (3.13.0-2) ... 257s Selecting previously unselected package python3-all-dev. 257s Preparing to unpack .../75-python3-all-dev_3.12.7-1_armhf.deb ... 257s Unpacking python3-all-dev (3.12.7-1) ... 257s Selecting previously unselected package python3-lzo:armhf. 258s Preparing to unpack .../76-python3-lzo_1.15-2_armhf.deb ... 258s Unpacking python3-lzo:armhf (1.15-2) ... 258s Selecting previously unselected package python3-numpy. 258s Preparing to unpack .../77-python3-numpy_1%3a1.26.4+ds-11build1_armhf.deb ... 258s Unpacking python3-numpy (1:1.26.4+ds-11build1) ... 258s Selecting previously unselected package python3-bx. 258s Preparing to unpack .../78-python3-bx_0.13.0-1_armhf.deb ... 258s Unpacking python3-bx (0.13.0-1) ... 258s Selecting previously unselected package python3-iniconfig. 258s Preparing to unpack .../79-python3-iniconfig_1.1.1-2_all.deb ... 258s Unpacking python3-iniconfig (1.1.1-2) ... 258s Selecting previously unselected package python3-pluggy. 258s Preparing to unpack .../80-python3-pluggy_1.5.0-1_all.deb ... 258s Unpacking python3-pluggy (1.5.0-1) ... 258s Selecting previously unselected package python3-pytest. 258s Preparing to unpack .../81-python3-pytest_8.3.3-1_all.deb ... 258s Unpacking python3-pytest (8.3.3-1) ... 258s Selecting previously unselected package python3-pytest-cython. 258s Preparing to unpack .../82-python3-pytest-cython_0.3.1-1_all.deb ... 258s Unpacking python3-pytest-cython (0.3.1-1) ... 258s Selecting previously unselected package autopkgtest-satdep. 258s Preparing to unpack .../83-1-autopkgtest-satdep.deb ... 258s Unpacking autopkgtest-satdep (0) ... 258s Setting up dh-python (6.20241024) ... 258s Setting up python3-iniconfig (1.1.1-2) ... 259s Setting up libarchive-zip-perl (1.68-1) ... 259s Setting up libdebhelper-perl (13.20ubuntu1) ... 259s Setting up linux-libc-dev:armhf (6.11.0-8.8) ... 259s Setting up m4 (1.4.19-4build1) ... 259s Setting up libgomp1:armhf (14.2.0-8ubuntu1) ... 259s Setting up python3-wheel (0.44.0-1) ... 259s Setting up libpython3.12t64:armhf (3.12.7-3) ... 259s Setting up libpython3.13-minimal:armhf (3.13.0-2) ... 259s Setting up autotools-dev (20220109.1) ... 259s Setting up libblas3:armhf (3.12.0-3build2) ... 259s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 259s Setting up python3-packaging (24.1-1) ... 259s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 259s Setting up python3-pyproject-hooks (1.2.0-1) ... 259s Setting up libmpc3:armhf (1.3.1-1build2) ... 259s Setting up cython3 (3.0.11+dfsg-1ubuntu1) ... 261s Setting up autopoint (0.22.5-2) ... 261s Setting up python3-toml (0.10.2-1) ... 261s Setting up python3-installer (0.7.0+dfsg1-3) ... 262s Setting up libgfortran5:armhf (14.2.0-8ubuntu1) ... 262s Setting up autoconf (2.72-3) ... 262s Setting up python3-pluggy (1.5.0-1) ... 262s Setting up libubsan1:armhf (14.2.0-8ubuntu1) ... 262s Setting up dwz (0.15-1build6) ... 262s Setting up libcrypt-dev:armhf (1:4.4.36-4build1) ... 262s Setting up libasan8:armhf (14.2.0-8ubuntu1) ... 262s Setting up debugedit (1:5.1-1) ... 262s Setting up python3.13-minimal (3.13.0-2) ... 263s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 263s Setting up libgcc-14-dev:armhf (14.2.0-8ubuntu1) ... 263s Setting up libisl23:armhf (0.27-1) ... 263s Setting up python3-build (1.2.2-1) ... 263s Setting up libc-dev-bin 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Processing triggers for systemd (256.5-2ubuntu4) ... 271s Processing triggers for man-db (2.12.1-3) ... 272s Processing triggers for install-info (7.1.1-1) ... 272s Processing triggers for libc-bin (2.40-1ubuntu3) ... 288s (Reading database ... 66684 files and directories currently installed.) 288s Removing autopkgtest-satdep (0) ... 294s autopkgtest [21:43:32]: test pybuild-autopkgtest: pybuild-autopkgtest 294s autopkgtest [21:43:32]: test pybuild-autopkgtest: [----------------------- 296s find lib -name "*_tests.py" >> debian/pybuild.testfiles 296s pybuild-autopkgtest 297s I: pybuild base:311: cd /tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build; python3.13 -m pytest 298s ============================= test session starts ============================== 298s platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 298s rootdir: /tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build 298s configfile: pytest.ini 298s plugins: typeguard-4.4.1, cython-0.3.1 298s collected 22 items / 44 errors 298s 298s ==================================== ERRORS ==================================== 298s _____________________ ERROR collecting array_tree_tests.py _____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/array_tree_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s array_tree_tests.py:11: in 298s from bx.arrays.array_tree import ( 298s E ModuleNotFoundError: No module named 'bx.arrays.array_tree' 298s _____________________ ERROR collecting array_tree_tests.py _____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/array_tree_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s array_tree_tests.py:11: in 298s from bx.arrays.array_tree import ( 298s E ModuleNotFoundError: No module named 'bx.arrays.array_tree' 298s ________________________ ERROR collecting bgzf_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bgzf_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bgzf_tests.py:1: in 298s import bx.misc.bgzf 298s E ModuleNotFoundError: No module named 'bx.misc.bgzf' 298s ________________________ ERROR collecting bgzf_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bgzf_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bgzf_tests.py:1: in 298s import bx.misc.bgzf 298s E ModuleNotFoundError: No module named 'bx.misc.bgzf' 298s _______________________ ERROR collecting bigwig_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bigwig_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bigwig_tests.py:4: in 298s import numpy 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting bigwig_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bigwig_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bigwig_tests.py:4: in 298s import numpy 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ____________________ ERROR collecting binned_array_tests.py ____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/binned_array_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s binned_array_tests.py:6: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ____________________ ERROR collecting binned_array_tests.py ____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/binned_array_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s binned_array_tests.py:6: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting bitset_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bitset_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bitset_tests.py:7: in 298s import bx.bitset 298s E ModuleNotFoundError: No module named 'bx.bitset' 298s _______________________ ERROR collecting bitset_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/bitset_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s bitset_tests.py:7: in 298s import bx.bitset 298s E ModuleNotFoundError: No module named 'bx.bitset' 298s ________________________ ERROR collecting cdb_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/cdb_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s cdb_tests.py:3: in 298s from bx.misc.cdb import FileCDBDict 298s /usr/lib/python3/dist-packages/bx/misc/cdb.py:4: in 298s from bx.misc.binary_file import ( 298s /usr/lib/python3/dist-packages/bx/misc/binary_file.py:8: in 298s import numpy 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ________________________ ERROR collecting cdb_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/cdb_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s cdb_tests.py:3: in 298s from bx.misc.cdb import FileCDBDict 298s /usr/lib/python3/dist-packages/bx/misc/cdb.py:4: in 298s from bx.misc.binary_file import ( 298s /usr/lib/python3/dist-packages/bx/misc/binary_file.py:8: in 298s import numpy 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ______________________ ERROR collecting cluster_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/cluster_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s cluster_tests.py:3: in 298s from bx.intervals.cluster import ClusterTree 298s /usr/lib/python3/dist-packages/bx/intervals/__init__.py:7: in 298s from bx.intervals.intersection import ( 298s E ModuleNotFoundError: No module named 'bx.intervals.intersection' 298s ______________________ ERROR collecting cluster_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/cluster_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s cluster_tests.py:3: in 298s from bx.intervals.cluster import ClusterTree 298s /usr/lib/python3/dist-packages/bx/intervals/__init__.py:7: in 298s from bx.intervals.intersection import ( 298s E ModuleNotFoundError: No module named 'bx.intervals.intersection' 298s ________________________ ERROR collecting epo_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/epo_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s epo_tests.py:7: in 298s import numpy as np 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ________________________ ERROR collecting epo_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/epo_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s epo_tests.py:7: in 298s import numpy as np 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting fasta_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/fasta_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s fasta_tests.py:7: in 298s from bx.seq import fasta 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s _______________________ ERROR collecting fasta_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/fasta_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s fasta_tests.py:7: in 298s from bx.seq import fasta 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ____________________ ERROR collecting intersection_tests.py ____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/intersection_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s intersection_tests.py:10: in 298s from bx.intervals.intersection import ( 298s /usr/lib/python3/dist-packages/bx/intervals/__init__.py:7: in 298s from bx.intervals.intersection import ( 298s E ModuleNotFoundError: No module named 'bx.intervals.intersection' 298s ____________________ ERROR collecting intersection_tests.py ____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/intersection_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s intersection_tests.py:10: in 298s from bx.intervals.intersection import ( 298s /usr/lib/python3/dist-packages/bx/intervals/__init__.py:7: in 298s from bx.intervals.intersection import ( 298s E ModuleNotFoundError: No module named 'bx.intervals.intersection' 298s ________________________ ERROR collecting lav_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/lav_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s lav_tests.py:7: in 298s import bx.align.lav as lav 298s /usr/lib/python3/dist-packages/bx/align/lav.py:11: in 298s import bx.seq 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ________________________ ERROR collecting lav_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/lav_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s lav_tests.py:7: in 298s import bx.align.lav as lav 298s /usr/lib/python3/dist-packages/bx/align/lav.py:11: in 298s import bx.seq 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ________________________ ERROR collecting nib_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/nib_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s nib_tests.py:7: in 298s from bx.seq import nib 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ________________________ ERROR collecting nib_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/nib_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s nib_tests.py:7: in 298s from bx.seq import nib 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s _______________________ ERROR collecting phast_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/phast_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s phast_tests.py:7: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting phast_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/phast_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READE: pybuild pybuild:389: test: plugin pyproject failed with: exit code=2: cd /tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build; python3.13 -m pytest 298s I: pybuild base:311: cd /tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build; python3.12 -m pytest 298s THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s phast_tests.py:7: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ________________________ ERROR collecting pwm_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/pwm_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s pwm_tests.py:1: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ________________________ ERROR collecting pwm_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/pwm_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s pwm_tests.py:1: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ________________________ ERROR collecting qdna_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/qdna_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s qdna_tests.py:7: in 298s from bx.seq import qdna 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ________________________ ERROR collecting qdna_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/qdna_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s qdna_tests.py:7: in 298s from bx.seq import qdna 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s _______________________ ERROR collecting score_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/score_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s score_tests.py:8: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting score_tests.py ________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/score_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s score_tests.py:8: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _____________________ ERROR collecting seekbzip2_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seekbzip2_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seekbzip2_tests.py:10: in 298s from bx.misc import seekbzip2 298s /usr/lib/python3/dist-packages/bx/misc/seekbzip2.py:7: in 298s from ._seekbzip2 import SeekBzip2 298s E ModuleNotFoundError: No module named 'bx.misc._seekbzip2' 298s _____________________ ERROR collecting seekbzip2_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seekbzip2_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seekbzip2_tests.py:10: in 298s from bx.misc import seekbzip2 298s /usr/lib/python3/dist-packages/bx/misc/seekbzip2.py:7: in 298s from ._seekbzip2 import SeekBzip2 298s E ModuleNotFoundError: No module named 'bx.misc._seekbzip2' 298s ________________________ ERROR collecting seq_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seq_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seq_tests.py:7: in 298s import bx.seq 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s ________________________ ERROR collecting seq_tests.py _________________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seq_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seq_tests.py:7: in 298s import bx.seq 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s _____________________ ERROR collecting seqmapping_tests.py _____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seqmapping_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seqmapping_tests.py:8: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _____________________ ERROR collecting seqmapping_tests.py _____________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/seqmapping_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s seqmapping_tests.py:8: in 298s from numpy import ( 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ______________________ ERROR collecting sitemask_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/sitemask_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s sitemask_tests.py:9: in 298s from bx.align.sitemask import cpg 298s /usr/lib/python3/dist-packages/bx/align/sitemask/cpg.py:6: in 298s from ._cpg import ( 298s E ModuleNotFoundError: No module named 'bx.align.sitemask._cpg' 298s ______________________ ERROR collecting sitemask_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/sitemask_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s sitemask_tests.py:9: in 298s from bx.align.sitemask import cpg 298s /usr/lib/python3/dist-packages/bx/align/sitemask/cpg.py:6: in 298s from ._cpg import ( 298s E ModuleNotFoundError: No module named 'bx.align.sitemask._cpg' 298s ______________________ ERROR collecting transfac_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/transfac_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s transfac_tests.py:3: in 298s from numpy import allclose 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s ______________________ ERROR collecting transfac_tests.py ______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/transfac_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in 298s from . import multiarray 298s /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in 298s from . import overrides 298s /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in 298s from numpy.core._multiarray_umath import ( 298s E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' 298s 298s During handling of the above exception, another exception occurred: 298s /usr/lib/python3/dist-packages/numpy/__init__.py:130: in 298s from numpy.__config__ import show as show_config 298s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 298s from numpy.core._multiarray_umath import ( 298s /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in 298s raise ImportError(msg) 298s E ImportError: 298s E 298s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 298s E 298s E Importing the numpy C-extensions failed. This error can happen for 298s E many reasons, often due to issues with your setup or how NumPy was 298s E installed. 298s E 298s E We have compiled some common reasons and troubleshooting tips at: 298s E 298s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 298s E 298s E Please note and check the following: 298s E 298s E * The Python version is: Python3.13 from "/usr/bin/python3.13" 298s E * The NumPy version is: "1.26.4" 298s E 298s E and make sure that they are the versions you expect. 298s E Please carefully study the documentation linked above for further help. 298s E 298s E Original error was: No module named 'numpy.core._multiarray_umath' 298s 298s The above exception was the direct cause of the following exception: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s transfac_tests.py:3: in 298s from numpy import allclose 298s /usr/lib/python3/dist-packages/numpy/__init__.py:135: in 298s raise ImportError(msg) from e 298s E ImportError: Error importing numpy: you should not try to import numpy from 298s E its source directory; please exit the numpy source tree, and relaunch 298s E your python interpreter from there. 298s _______________________ ERROR collecting twobit_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/twobit_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s twobit_tests.py:5: in 298s from bx.seq import twobit 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s _______________________ ERROR collecting twobit_tests.py _______________________ 298s ImportError while importing test module '/tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build/twobit_tests.py'. 298s Hint: make sure your test modules/packages have valid Python names. 298s Traceback: 298s /usr/lib/python3.13/importlib/__init__.py:88: in import_module 298s return _bootstrap._gcd_import(name[level:], package, level) 298s twobit_tests.py:5: in 298s from bx.seq import twobit 298s /usr/lib/python3/dist-packages/bx/seq/__init__.py:7: in 298s from bx.seq.core import ( 298s /usr/lib/python3/dist-packages/bx/seq/core.py:11: in 298s from . import ( 298s /usr/lib/python3/dist-packages/bx/seq/nib.py:30: in 298s from . import _nib 298s E ImportError: cannot import name '_nib' from partially initialized module 'bx.seq' (most likely due to a circular import) (/usr/lib/python3/dist-packages/bx/seq/__init__.py) 298s =============================== warnings summary =============================== 298s ../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1500 298s /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1500: PytestConfigWarning: No files were found in testpaths; consider removing or adjusting your testpaths configuration. Searching recursively from the current directory instead. 298s self.args, self.args_source = self._decide_args( 298s 298s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 298s =========================== short test summary info ============================ 298s ERROR array_tree_tests.py 298s ERROR array_tree_tests.py 298s ERROR bgzf_tests.py 298s ERROR bgzf_tests.py 298s ERROR bigwig_tests.py 298s ERROR bigwig_tests.py 298s ERROR binned_array_tests.py 298s ERROR binned_array_tests.py 298s ERROR bitset_tests.py 298s ERROR bitset_tests.py 298s ERROR cdb_tests.py 298s ERROR cdb_tests.py 298s ERROR cluster_tests.py 298s ERROR cluster_tests.py 298s ERROR epo_tests.py 298s ERROR epo_tests.py 298s ERROR fasta_tests.py 298s ERROR fasta_tests.py 298s ERROR intersection_tests.py 298s ERROR intersection_tests.py 298s ERROR lav_tests.py 298s ERROR lav_tests.py 298s ERROR nib_tests.py 298s ERROR nib_tests.py 298s ERROR phast_tests.py 298s ERROR phast_tests.py 298s ERROR pwm_tests.py 298s ERROR pwm_tests.py 298s ERROR qdna_tests.py 298s ERROR qdna_tests.py 298s ERROR score_tests.py 298s ERROR score_tests.py 298s ERROR seekbzip2_tests.py 298s ERROR seekbzip2_tests.py 298s ERROR seq_tests.py 298s ERROR seq_tests.py 298s ERROR seqmapping_tests.py 298s ERROR seqmapping_tests.py 298s ERROR sitemask_tests.py 298s ERROR sitemask_tests.py 298s ERROR transfac_tests.py 298s ERROR transfac_tests.py 298s ERROR twobit_tests.py 298s ERROR twobit_tests.py 298s !!!!!!!!!!!!!!!!!!! Interrupted: 44 errors during collection !!!!!!!!!!!!!!!!!!! 298s ======================== 1 warning, 44 errors in 1.21s ========================= 299s ============================= test session starts ============================== 299s platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 299s rootdir: /tmp/autopkgtest.LV8W0i/autopkgtest_tmp/build 299s configfile: pytest.ini 299s plugins: typeguard-4.4.1, cython-0.3.1 299s collected 134 items 299s 301s array_tree_tests.py ...... [ 4%] 301s bgzf_tests.py . [ 5%] 301s bigwig_tests.py ........................... [ 25%] 302s binned_array_tests.py .... [ 28%] 302s bitset_tests.py .................. [ 41%] 302s cdb_tests.py . [ 42%] 302s cluster_tests.py ............. [ 52%] 303s epo_tests.py ..... [ 55%] 303s fasta_tests.py . [ 56%] 303s fpconst_tests.py . [ 57%] 304s intersection_tests.py ............. [ 67%] 305s interval_index_file_tests.py ... [ 69%] 305s lav_tests.py . [ 70%] 305s maf_tests.py ........ [ 76%] 305s newick_tests.py ........ [ 82%] 305s nib_tests.py . [ 82%] 305s phast_tests.py . [ 83%] 305s pwm_tests.py ... [ 85%] 305s qdna_tests.py . [ 86%] 305s score_tests.py ..... [ 90%] 305s seq_tests.py .... [ 93%] 305s sitemask_tests.py ... [ 95%] 305s transfac_tests.py . [ 96%] 305s twobit_tests.py ... [ 98%] 305s wiggle_tests.py .. [100%] 305s 305s =============================== warnings summary =============================== 305s ../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1500 305s /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1500: PytestConfigWarning: No files were found in testpaths; consider removing or adjusting your testpaths configuration. Searching recursively from the current directory instead. 305s self.args, self.args_source = self._decide_args( 305s 305s bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 12000 10 mean n/a n/a n/a n/a -0.164968 -0.194169 -0.0533029 0.00390226 -0.00226906 -0.0365958\n] 305s bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 20000 100 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a -0.163546 -0.272118 -0.127111 -0.116169 0.0202627 -0.0243522 0.0349913 -0.0054408 -0.00101548 -0.0307148 -0.0374406 -0.0024669 -0.034042 -0.0343892 -0.0199075 -0.0406878 -0.0322236 -0.080479 -0.235991 -0.0897865 -0.041593 0.019942 -0.0608448 0.0144338 -0.0348468 0.0195101 -0.0555526 -0.0892809 0.011672 -0.173894 -0.0849444 0.0718796 0.0608432 0.0313183 0.0439315 -0.0242363 0.03288 0.0318241 0.122005 0.0879138 0.00102565 0.0334753 -0.00263047 -0.103023 -0.0275437 0.0958326 0.0147229 -0.0629772 0.00541821 0.062474 0.069069 -0.0389339 0.0206174 0.0278476 -0.0182009 0.00568736 0.000397305 0.13104 0.105984 -0.00662042 0.143469 0.111045 0.0322849 0.11452 0.0865186 0.055436 0.141388 0.103004 -0.00350213 0.053879 0.10582 0.0983312 -0.0351239 0.10085 0.110439 0.0451646 -0.00949231 0.0487825 0.042197 -0.00328549 -0.00851082 -0.0437525 0.0618735 -0.0315407 -0.00756448 -0.0523631 0.0432315 0.0228745 0.106009 0.0299314 0.0473805\n] 305s bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 12000 100 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a 0.0508425 0.0508425 -0.0768488 -0.189129 -0.439008 -0.182524 -0.304712 -0.197935 -0.462124 -0.194633 -0.2882 -0.0570346 -0.0724456 -0.301409 0.0508425 -0.0702441 -0.182524 0.0508425 0.0508425 -0.55459 0.0508425 0.0508425 0.0508425 0.0508425 0.00460946 -0.0152047 -0.0152047 -0.095562 -0.0570346 0.0695559 0.127898 0.000206554 -0.013003 0.0167182 -0.0559341 0.0508425 0.0904709 0.101479 -0.155005 -0.0812521 0.0145168 0.0992772 0.10368 -0.155005 0.002408 -0.0911592 -0.0768488 0.013416 -0.00529754 -0.0702443 0.0013071 -0.0702442 0.0919354 -0.101144 -0.000301097\n] 305s bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 20000 1000 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a 0.0508425 0.0508425 0.0508425 0.0112142 -0.164912 -0.206742 -0.171516 -0.671274 -0.206741 -0.415891 0.0508425 -0.411489 -0.197936 0.0508425 -0.446713 -0.219951 -0.704298 -0.200137 -0.189129 -0.41369 -0.162711 0.0508425 -0.164912 -0.195734 0.0508425 -0.440108 -0.162711 0.0508425 0.0508425 0.0508425 -0.191331 -0.200137 -0.164912 0.0508425 0.0508425 0.0508425 0.0508425 -0.909043 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python{version} -p "3.13 3.12" returned exit code 13 305s make: *** [/tmp/jFc9rv0U37/run:4: pybuild-autopkgtest] Error 25 305s pybuild-autopkgtest: error: /tmp/jFc9rv0U37/run pybuild-autopkgtest returned exit code 2 305s autopkgtest [21:43:43]: test pybuild-autopkgtest: -----------------------] 309s pybuild-autopkgtest FAIL non-zero exit status 25 309s autopkgtest [21:43:47]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 313s autopkgtest [21:43:51]: @@@@@@@@@@@@@@@@@@@@ summary 313s pybuild-autopkgtest FAIL non-zero exit status 25