0s autopkgtest [15:33:45]: starting date and time: 2025-03-15 15:33:45+0000 0s autopkgtest [15:33:45]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:33:45]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.l6oyt_x5/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade pymatgen --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.234 lxd-armhf-10.145.243.234:autopkgtest/ubuntu/plucky/armhf 21s autopkgtest [15:34:06]: testbed dpkg architecture: armhf 22s autopkgtest [15:34:07]: testbed apt version: 2.9.33 26s autopkgtest [15:34:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [15:34:13]: testbed release detected to be: None 36s autopkgtest [15:34:21]: updating testbed package index (apt update) 38s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 38s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 39s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 39s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 39s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 39s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 40s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [81.0 kB] 40s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1944 B] 40s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 40s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [326 kB] 40s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [12.1 kB] 40s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 40s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [332 B] 40s Get:15 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 41s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 64s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1400 kB] 66s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 67s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 67s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 67s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 84s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 86s Fetched 41.0 MB in 48s (863 kB/s) 87s Reading package lists... 93s autopkgtest [15:35:18]: upgrading testbed (apt dist-upgrade and autopurge) 94s Reading package lists... 95s Building dependency tree... 95s Reading state information... 97s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 97s Starting 2 pkgProblemResolver with broken count: 0 97s Done 99s Entering ResolveByKeep 99s 100s Calculating upgrade... 101s The following packages will be upgraded: 101s libc-bin libc6 locales python3-jinja2 sos strace 101s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Need to get 8642 kB of archives. 101s After this operation, 23.6 kB of additional disk space will be used. 101s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 110s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 111s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 111s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 112s Preconfiguring packages ... 112s Fetched 8642 kB in 10s (849 kB/s) 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 112s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 112s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 113s Setting up libc6:armhf (2.41-1ubuntu2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 113s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 113s Setting up libc-bin (2.41-1ubuntu2) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 113s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 113s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 114s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 114s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 114s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 114s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 114s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 114s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 114s Setting up sos (4.9.0-5) ... 115s Setting up locales (2.41-1ubuntu2) ... 116s Generating locales (this might take a while)... 120s en_US.UTF-8... done 120s Generation complete. 120s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 120s Setting up strace (6.13+ds-1ubuntu1) ... 120s Processing triggers for man-db (2.13.0-1) ... 122s Processing triggers for systemd (257.3-1ubuntu3) ... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 125s Starting pkgProblemResolver with broken count: 0 125s Starting 2 pkgProblemResolver with broken count: 0 125s Done 126s Solving dependencies... 127s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s autopkgtest [15:35:54]: rebooting testbed after setup commands that affected boot 168s autopkgtest [15:36:33]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 193s autopkgtest [15:36:58]: @@@@@@@@@@@@@@@@@@@@ apt-source pymatgen 226s Get:1 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2025.2.18+dfsg1-4 (dsc) [3207 B] 226s Get:2 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2025.2.18+dfsg1-4 (tar) [9896 kB] 226s Get:3 http://ftpmaster.internal/ubuntu plucky/universe pymatgen 2025.2.18+dfsg1-4 (diff) [17.1 kB] 226s gpgv: Signature made Thu Feb 27 10:55:17 2025 UTC 226s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 226s gpgv: issuer "dparsons@debian.org" 226s gpgv: Can't check signature: No public key 226s dpkg-source: warning: cannot verify inline signature for ./pymatgen_2025.2.18+dfsg1-4.dsc: no acceptable signature found 227s autopkgtest [15:37:32]: testing package pymatgen version 2025.2.18+dfsg1-4 230s autopkgtest [15:37:35]: build not needed 238s autopkgtest [15:37:43]: test test-pymatgen: preparing testbed 240s Reading package lists... 241s Building dependency tree... 241s Reading state information... 241s Starting pkgProblemResolver with broken count: 0 241s Starting 2 pkgProblemResolver with broken count: 0 241s Done 243s The following NEW packages will be installed: 243s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14 243s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cython3 debhelper 243s debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common 243s dwz fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 243s fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-lyx 243s fonts-mathjax g++ g++-14 g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf 243s gcc gcc-14 gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext 243s hwloc-nox intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 243s libboost-iostreams1.83.0 libc-dev-bin libc6-dev libcairo2 libcc1-0 243s libcrypt-dev libdebhelper-perl libdeflate0 libdouble-conversion3 libdw1t64 243s libegl-mesa0 libegl1 libexpat1-dev libfile-stripnondeterminism-perl 243s libfontconfig1 libfreetype6 libgbm1 libgcc-14-dev libgfortran5 libgl1 243s libgl1-mesa-dri libgl2ps1.4 libgles2 libglew2.2 libglvnd0 libglx-mesa0 243s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 243s libhwloc15 libice6 libimagequant0 libinchi1.07 libinput-bin libinput10 243s libisl23 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery 243s libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl 243s libjsoncpp26 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm19 liblzf1 243s libmaeparser1 libmd4c0 libmpc3 libmpich12 libmtdev1t64 libnetcdf22 libogg0 243s libopenbabel7 libopengl0 libopenjp2-7 libpcre2-16-0 libpixman-1-0 libproj25 243s libpython3-all-dev libpython3-dev libpython3.13 libpython3.13-dev 243s libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5gui5t64 libqt5network5t64 243s libqt5widgets5t64 libraqm0 libsharpyuv0 libslurm42t64 libsm6 243s libstdc++-14-dev libsymspg2 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 243s libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 libtool libubsan1 243s libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common libwacom9 243s libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 243s libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 243s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 243s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 243s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxft2 243s libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 243s linux-libc-dev m4 mesa-libgallium mpi-default-bin mpich packmol po-debconf 243s proj-data pybuild-plugin-pyproject pymatgen-test-files 243s python-matplotlib-data python-pymatgen-doc python3-alabaster python3-all 243s python3-all-dev python3-annotated-types python3-ase python3-brotli 243s python3-bs4 python3-bson python3-build python3-cftime python3-contourpy 243s python3-cycler python3-decorator python3-defusedxml python3-dev 243s python3-dnspython python3-docutils python3-email-validator 243s python3-fastjsonschema python3-fonttools python3-frozendict python3-fs 243s python3-h5py python3-h5py-serial python3-imagesize python3-iniconfig 243s python3-installer python3-joblib python3-jupyter-core python3-kiwisolver 243s python3-latexcodec python3-lxml python3-lz4 python3-matplotlib python3-monty 243s python3-mpi4py python3-mpmath python3-nbformat python3-netcdf4 243s python3-networkx python3-numpy python3-numpy-dev python3-openbabel 243s python3-palettable python3-pandas python3-pandas-lib python3-phonopy 243s python3-pil python3-pil.imagetk python3-platformdirs python3-plotly 243s python3-pluggy python3-pybtex python3-pydantic python3-pydantic-core 243s python3-pymatgen python3-pyproject-hooks python3-pytest python3-pytz 243s python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib python3-scipy 243s python3-snowballstemmer python3-soupsieve python3-spglib python3-sphinx 243s python3-sphinx-rtd-theme python3-sphinxcontrib.jquery python3-sympy 243s python3-tabulate python3-tenacity python3-tk python3-toml python3-tqdm 243s python3-traitlets python3-tz python3-ufolib2 python3-uncertainties 243s python3-unicodedata2 python3-vtk9 python3-wheel python3.12-tk python3.13-dev 243s python3.13-tk rpcsvc-proto sgml-base sphinx-common sphinx-rtd-theme-common 243s tk8.6-blt2.5 unicode-data x11-common xml-core zlib1g-dev 243s 0 upgraded, 279 newly installed, 0 to remove and 0 not upgraded. 243s Need to get 493 MB of archives. 243s After this operation, 1734 MB of additional disk space will be used. 243s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-lato all 2.015-1 [2781 kB] 246s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy-dev armhf 1:2.2.3+ds-5 [141 kB] 246s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 247s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 247s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 250s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:2.2.3+ds-5 [3725 kB] 254s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB] 254s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-7 [238 kB] 254s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3ubuntu1 [383 kB] 254s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 254s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.17-3ubuntu1 [572 kB] 255s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.23.1-1 [619 kB] 256s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 257s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 258s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 258s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 259s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 259s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 260s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 260s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 260s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 260s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 260s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 260s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-8 [527 kB] 261s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf blt armhf 2.5.3+dfsg-8 [4824 B] 261s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 261s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 263s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 263s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 263s Get:30 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 265s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 266s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 266s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 277s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 277s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 277s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 277s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 277s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 277s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 281s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 282s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 283s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 303s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 304s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 304s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 304s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 307s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 319s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 319s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 319s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 319s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 319s Get:52 http://ftpmaster.internal/ubuntu plucky/universe armhf cython3 armhf 3.0.11+dfsg-2ubuntu2 [2469 kB] 322s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.24.1ubuntu2 [95.4 kB] 322s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.5.4-4 [168 kB] 323s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 323s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 323s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [20.3 kB] 323s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.1-2 [5064 B] 323s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 323s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-2 [46.7 kB] 323s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 323s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.23.1-1 [1053 kB] 324s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 324s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 325s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.24.1ubuntu2 [895 kB] 326s Get:66 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20250308 [118 kB] 326s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB] 326s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf docutils-common all 0.21.2+dfsg-2 [131 kB] 326s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 326s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 327s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 327s Get:72 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-lyx all 2.4.3-1 [171 kB] 327s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 330s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 330s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf libboost-iostreams1.83.0 armhf 1.83.0-4.1ubuntu2 [258 kB] 330s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 331s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 331s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 331s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 331s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 331s Get:81 http://ftpmaster.internal/ubuntu plucky/universe armhf libdouble-conversion3 armhf 3.3.1-1 [39.1 kB] 331s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libwayland-server0 armhf 1.23.1-3 [30.3 kB] 331s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libllvm19 armhf 1:19.1.7-1ubuntu2 [27.8 MB] 365s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf libx11-xcb1 armhf 2:1.8.10-2 [7902 B] 365s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-dri3-0 armhf 1.17.0-2 [7120 B] 365s Get:86 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-present0 armhf 1.17.0-2 [5940 B] 365s Get:87 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-randr0 armhf 1.17.0-2 [17.0 kB] 365s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-sync1 armhf 1.17.0-2 [8732 B] 365s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xfixes0 armhf 1.17.0-2 [10.0 kB] 365s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf libxshmfence1 armhf 1.3-1build5 [4464 B] 365s Get:91 http://ftpmaster.internal/ubuntu plucky/main armhf mesa-libgallium armhf 25.0.1-2ubuntu1 [8255 kB] 376s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf libgbm1 armhf 25.0.1-2ubuntu1 [29.1 kB] 376s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf libwayland-client0 armhf 1.23.1-3 [23.3 kB] 376s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf libegl-mesa0 armhf 25.0.1-2ubuntu1 [100 kB] 376s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libexpat1-dev armhf 2.6.4-1 [121 kB] 376s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf libvulkan1 armhf 1.4.304.0-1 [127 kB] 376s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf libgl1-mesa-dri armhf 25.0.1-2ubuntu1 [31.9 kB] 376s Get:98 http://ftpmaster.internal/ubuntu plucky/main armhf libglvnd0 armhf 1.7.0-1build1 [83.7 kB] 376s Get:99 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-glx0 armhf 1.17.0-2 [22.6 kB] 376s Get:100 http://ftpmaster.internal/ubuntu plucky/main armhf libxxf86vm1 armhf 1:1.1.4-1build4 [8068 B] 376s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf libglx-mesa0 armhf 25.0.1-2ubuntu1 [120 kB] 377s Get:102 http://ftpmaster.internal/ubuntu plucky/main armhf libglx0 armhf 1.7.0-1build1 [39.3 kB] 377s Get:103 http://ftpmaster.internal/ubuntu plucky/main armhf libgl1 armhf 1.7.0-1build1 [105 kB] 377s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf libgl2ps1.4 armhf 1.4.2+dfsg1-2build1 [37.7 kB] 377s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf libglew2.2 armhf 2.2.0-4build1 [197 kB] 378s Get:106 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 378s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 379s Get:108 http://ftpmaster.internal/ubuntu plucky/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 380s Get:109 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-310 armhf 1.14.5+repack-3 [1410 kB] 383s Get:110 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3 [58.8 kB] 383s Get:111 http://ftpmaster.internal/ubuntu plucky/universe armhf libhwloc15 armhf 2.12.0-1 [147 kB] 384s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 384s Get:113 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 384s Get:114 http://ftpmaster.internal/ubuntu plucky/universe armhf libinchi1.07 armhf 1.07.3+dfsg-1 [491 kB] 386s Get:115 http://ftpmaster.internal/ubuntu plucky/main armhf libwacom-common all 2.14.0-1 [103 kB] 387s Get:116 http://ftpmaster.internal/ubuntu plucky/main armhf libwacom9 armhf 2.14.0-1 [23.6 kB] 387s Get:117 http://ftpmaster.internal/ubuntu plucky/main armhf libinput-bin armhf 1.27.1-1 [25.9 kB] 387s Get:118 http://ftpmaster.internal/ubuntu plucky/main armhf libmtdev1t64 armhf 1.1.7-1 [13.0 kB] 387s Get:119 http://ftpmaster.internal/ubuntu plucky/main armhf libinput10 armhf 1.27.1-1 [124 kB] 388s Get:120 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 388s Get:121 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 388s Get:122 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 389s Get:123 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 390s Get:124 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 391s Get:125 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 391s Get:126 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 8.1.3-4 [30.9 kB] 392s Get:127 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-perl all 4.10000-1 [81.9 kB] 392s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf libjsoncpp26 armhf 1.9.6-3 [75.5 kB] 392s Get:129 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 392s Get:130 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 393s Get:131 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 393s Get:132 http://ftpmaster.internal/ubuntu plucky/universe armhf liblzf1 armhf 3.6-4 [6554 B] 393s Get:133 http://ftpmaster.internal/ubuntu plucky/universe armhf libmaeparser1 armhf 1.3.1-1build1 [89.3 kB] 394s Get:134 http://ftpmaster.internal/ubuntu plucky/universe armhf libmd4c0 armhf 0.5.2-2 [38.2 kB] 394s Get:135 http://ftpmaster.internal/ubuntu plucky/universe armhf libnetcdf22 armhf 1:4.9.3-1 [459 kB] 396s Get:136 http://ftpmaster.internal/ubuntu plucky/main armhf libogg0 armhf 1.3.5-3build1 [20.5 kB] 396s Get:137 http://ftpmaster.internal/ubuntu plucky/universe armhf libopenbabel7 armhf 3.1.1+dfsg-11ubuntu3 [3241 kB] 407s Get:138 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-16-0 armhf 10.45-1 [207 kB] 408s Get:139 http://ftpmaster.internal/ubuntu plucky/universe armhf proj-data all 9.5.1-1 [7924 kB] 432s Get:140 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 432s Get:141 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 432s Get:142 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 433s Get:143 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 433s Get:144 http://ftpmaster.internal/ubuntu plucky/universe armhf libproj25 armhf 9.5.1-1 [1331 kB] 436s Get:145 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.2-2 [2079 kB] 440s Get:146 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 442s Get:147 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-dev armhf 3.13.2-2 [4265 kB] 450s Get:148 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-dev armhf 3.13.2-2 [10.7 kB] 450s Get:149 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-all-dev armhf 3.13.2-2 [910 B] 450s Get:150 http://ftpmaster.internal/ubuntu plucky/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 451s Get:151 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5core5t64 armhf 5.15.15+dfsg-4ubuntu1 [1768 kB] 454s Get:152 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5dbus5t64 armhf 5.15.15+dfsg-4ubuntu1 [198 kB] 454s Get:153 http://ftpmaster.internal/ubuntu plucky/main armhf libegl1 armhf 1.7.0-1build1 [29.8 kB] 454s Get:154 http://ftpmaster.internal/ubuntu plucky/main armhf libgles2 armhf 1.7.0-1build1 [18.0 kB] 454s Get:155 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5network5t64 armhf 5.15.15+dfsg-4ubuntu1 [653 kB] 456s Get:156 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 456s Get:157 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-icccm4 armhf 0.4.2-1 [9840 B] 456s Get:158 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-util1 armhf 0.4.1-1 [9468 B] 456s Get:159 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-image0 armhf 0.4.0-2build1 [9680 B] 456s Get:160 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-keysyms1 armhf 0.4.1-1 [8076 B] 456s Get:161 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render-util0 armhf 0.3.10-1 [9444 B] 456s Get:162 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shape0 armhf 1.17.0-2 [6030 B] 456s Get:163 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xinerama0 armhf 1.17.0-2 [5212 B] 456s Get:164 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xinput0 armhf 1.17.0-2 [29.5 kB] 456s Get:165 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xkb1 armhf 1.17.0-2 [28.8 kB] 456s Get:166 http://ftpmaster.internal/ubuntu plucky/main armhf libxkbcommon-x11-0 armhf 1.7.0-2 [13.6 kB] 456s Get:167 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5gui5t64 armhf 5.15.15+dfsg-4ubuntu1 [2968 kB] 462s Get:168 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5widgets5t64 armhf 5.15.15+dfsg-4ubuntu1 [2261 kB] 466s Get:169 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.2-1 [12.4 kB] 466s Get:170 http://ftpmaster.internal/ubuntu plucky/universe armhf libslurm42t64 armhf 24.11.1-1 [769 kB] 468s Get:171 http://ftpmaster.internal/ubuntu plucky/universe armhf libsymspg2 armhf 2.5.0-2build1 [195 kB] 468s Get:172 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbbbind-2-5 armhf 2022.0.0-2 [13.8 kB] 468s Get:173 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbbmalloc2 armhf 2022.0.0-2 [47.0 kB] 469s Get:174 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbb12 armhf 2022.0.0-2 [80.8 kB] 469s Get:175 http://ftpmaster.internal/ubuntu plucky/main armhf libtheoradec1 armhf 1.2.0~alpha1+dfsg-5 [45.7 kB] 469s Get:176 http://ftpmaster.internal/ubuntu plucky/main armhf libtheoraenc1 armhf 1.2.0~alpha1+dfsg-5 [89.3 kB] 469s Get:177 http://ftpmaster.internal/ubuntu plucky/universe armhf libmpich12 armhf 4.2.1-5 [1574 kB] 473s Get:178 http://ftpmaster.internal/ubuntu plucky/main armhf libopengl0 armhf 1.7.0-1build1 [36.2 kB] 473s Get:179 http://ftpmaster.internal/ubuntu plucky/universe armhf libvtk9.3 armhf 9.3.0+dfsg1-4ubuntu1 [21.9 MB] 505s Get:180 http://ftpmaster.internal/ubuntu plucky/universe armhf libvtk9.3-qt armhf 9.3.0+dfsg1-4ubuntu1 [161 kB] 506s Get:181 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.5.0-0.1 [11.5 kB] 506s Get:182 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.5.0-0.1 [22.4 kB] 506s Get:183 http://ftpmaster.internal/ubuntu plucky/main armhf libxslt1.1 armhf 1.1.39-0exp1ubuntu2 [152 kB] 506s Get:184 http://ftpmaster.internal/ubuntu plucky/universe armhf packmol armhf 1:20.15.3-1 [123 kB] 506s Get:185 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 506s Get:186 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 506s Get:187 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.45.1-1 [57.7 kB] 506s Get:188 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 506s Get:189 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 506s Get:190 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20250308 [1726 B] 506s Get:191 http://ftpmaster.internal/ubuntu plucky/universe armhf pymatgen-test-files all 2025.2.18-1 [214 MB] 837s Get:192 http://ftpmaster.internal/ubuntu plucky/universe armhf python-matplotlib-data all 3.8.3-7build1 [2934 kB] 842s Get:193 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 852s Get:194 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1014 kB] 854s Get:195 http://ftpmaster.internal/ubuntu plucky/universe armhf python-pymatgen-doc all 2025.2.18+dfsg1-4 [1186 kB] 857s Get:196 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.13.2-2 [886 B] 857s Get:197 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-dev armhf 3.13.2-2 [509 kB] 858s Get:198 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dev armhf 3.13.2-2 [26.7 kB] 858s Get:199 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all-dev armhf 3.13.2-2 [912 B] 858s Get:200 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-annotated-types all 0.7.0-1 [19.4 kB] 858s Get:201 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 858s Get:202 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.14.1-4ubuntu2 [16.7 MB] 894s Get:203 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-spglib armhf 2.5.0-2build1 [30.1 kB] 894s Get:204 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.3-2 [172 kB] 895s Get:205 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 11.1.0-5build1 [435 kB] 895s Get:206 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-tk armhf 3.12.9-1 [113 kB] 895s Get:207 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-tk armhf 3.13.2-2 [103 kB] 896s Get:208 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tk armhf 3.13.1-1 [9770 B] 896s Get:209 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pil.imagetk armhf 11.1.0-5build1 [9226 B] 896s Get:210 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-contourpy armhf 1.3.1-1build1 [195 kB] 896s Get:211 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cycler all 0.12.1-1 [9716 B] 896s Get:212 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-brotli armhf 1.1.0-2build4 [322 kB] 896s Get:213 http://ftpmaster.internal/ubuntu plucky/main armhf python3-platformdirs all 4.3.6-1 [16.8 kB] 896s Get:214 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fs all 2.4.16-7 [90.8 kB] 896s Get:215 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lxml armhf 5.3.1-1build1 [1282 kB] 898s Get:216 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-lz4 armhf 4.4.0+dfsg-1build1 [25.3 kB] 898s Get:217 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpmath all 1.3.0-1 [425 kB] 898s Get:218 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sympy all 1.13.3-5 [4229 kB] 903s Get:219 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 903s Get:220 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-unicodedata2 armhf 15.1.0+ds-1build3 [357 kB] 904s Get:221 http://ftpmaster.internal/ubuntu plucky/universe armhf unicode-data all 15.1.0-1 [8878 kB] 914s Get:222 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fonttools armhf 4.55.3-2build1 [1462 kB] 916s Get:223 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-kiwisolver armhf 1.4.7-3build1 [57.7 kB] 916s Get:224 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-matplotlib armhf 3.8.3-7build1 [17.3 MB] 935s Get:225 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ase all 3.23.0-1ubuntu1 [1754 kB] 937s Get:226 http://ftpmaster.internal/ubuntu plucky/main armhf python3-soupsieve all 2.6-1 [33.0 kB] 938s Get:227 http://ftpmaster.internal/ubuntu plucky/main armhf python3-bs4 all 4.13.3-2 [136 kB] 938s Get:228 http://ftpmaster.internal/ubuntu plucky/main armhf python3-bson all 4.10.1-5build1 [42.9 kB] 938s Get:229 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cftime armhf 1.6.4-2 [212 kB] 938s Get:230 http://ftpmaster.internal/ubuntu plucky/main armhf python3-defusedxml all 0.7.1-3 [42.2 kB] 938s Get:231 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dnspython all 2.7.0-1ubuntu1 [167 kB] 938s Get:232 http://ftpmaster.internal/ubuntu plucky/main armhf python3-roman all 5.0-1 [10.3 kB] 938s Get:233 http://ftpmaster.internal/ubuntu plucky/main armhf python3-docutils all 0.21.2+dfsg-2 [409 kB] 939s Get:234 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-email-validator all 2.2.0-1 [28.5 kB] 939s Get:235 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fastjsonschema all 2.21.1-1 [20.4 kB] 939s Get:236 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-frozendict all 2.4.6-1 [13.2 kB] 939s Get:237 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py-serial armhf 3.13.0-1 [1113 kB] 940s Get:238 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py all 3.13.0-1 [7978 B] 940s Get:239 http://ftpmaster.internal/ubuntu plucky/main armhf python3-imagesize all 1.4.1-1 [6844 B] 940s Get:240 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 940s Get:241 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-joblib all 1.4.2-3 [205 kB] 940s Get:242 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 940s Get:243 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-jupyter-core all 5.7.2-5 [28.1 kB] 940s Get:244 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-latexcodec all 3.0.0-1 [16.6 kB] 940s Get:245 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pytz all 2025.1-3 [162 kB] 941s Get:246 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2025.1-3 [1866 B] 941s Get:247 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-8build1 [4877 kB] 946s Get:248 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-8build1 [3112 kB] 950s Get:249 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pydantic-core armhf 2.27.2-1build1 [1531 kB] 952s Get:250 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pydantic armhf 2.10.6-1 [288 kB] 952s Get:251 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-tqdm all 4.67.1-2 [92.5 kB] 952s Get:252 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ruamel.yaml.clib armhf 0.2.12+ds-1build1 [130 kB] 952s Get:253 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ruamel.yaml all 0.18.10+ds-1 [127 kB] 952s Get:254 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-monty all 2025.1.9-1 [40.1 kB] 952s Get:255 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-nbformat all 5.9.1-1 [41.2 kB] 952s Get:256 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-netcdf4 armhf 1.7.2-1build4 [601 kB] 953s Get:257 http://ftpmaster.internal/ubuntu plucky/main armhf python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 966s Get:258 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-openbabel armhf 3.1.1+dfsg-11ubuntu3 [588 kB] 967s Get:259 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-palettable all 3.3.3-1 [81.3 kB] 967s Get:260 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-phonopy armhf 2.35.0-1 [316 kB] 967s Get:261 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tenacity all 9.0.0-0ubuntu1 [17.0 kB] 967s Get:262 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-plotly all 5.20.0+dfsg-1 [2766 kB] 971s Get:263 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 971s Get:264 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pybtex all 0.24.0-4 [70.0 kB] 971s Get:265 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tabulate all 0.9.0-1 [45.3 kB] 971s Get:266 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-uncertainties all 3.2.2-1 [51.4 kB] 971s Get:267 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pymatgen armhf 2025.2.18+dfsg1-4 [2613 kB] 973s Get:268 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.5-1 [252 kB] 974s Get:269 http://ftpmaster.internal/ubuntu plucky/main armhf python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 974s Get:270 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-common all 8.1.3-4 [663 kB] 974s Get:271 http://ftpmaster.internal/ubuntu plucky/main armhf python3-alabaster all 0.7.16-0.1 [18.5 kB] 974s Get:272 http://ftpmaster.internal/ubuntu plucky/main armhf python3-sphinx all 8.1.3-4 [474 kB] 975s Get:273 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinxcontrib.jquery all 4.1-5 [6678 B] 975s Get:274 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [23.5 kB] 975s Get:275 http://ftpmaster.internal/ubuntu plucky/universe armhf hwloc-nox armhf 2.12.0-1 [213 kB] 975s Get:276 http://ftpmaster.internal/ubuntu plucky/universe armhf mpich armhf 4.2.1-5 [214 kB] 976s Get:277 http://ftpmaster.internal/ubuntu plucky/universe armhf mpi-default-bin armhf 1.18 [2504 B] 976s Get:278 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpi4py armhf 4.0.1-6ubuntu1 [1097 kB] 977s Get:279 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-vtk9 armhf 9.3.0+dfsg1-4ubuntu1 [7333 kB] 987s Fetched 493 MB in 12min 23s (663 kB/s) 987s Selecting previously unselected package fonts-lato. 987s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 987s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 987s Unpacking fonts-lato (2.015-1) ... 988s Selecting previously unselected package python3-numpy-dev:armhf. 988s Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-5_armhf.deb ... 988s Unpacking python3-numpy-dev:armhf (1:2.2.3+ds-5) ... 988s Selecting previously unselected package libblas3:armhf. 988s Preparing to unpack .../002-libblas3_3.12.1-2_armhf.deb ... 988s Unpacking libblas3:armhf (3.12.1-2) ... 988s Selecting previously unselected package libgfortran5:armhf. 988s Preparing to unpack .../003-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 988s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 988s Selecting previously unselected package liblapack3:armhf. 988s Preparing to unpack .../004-liblapack3_3.12.1-2_armhf.deb ... 988s Unpacking liblapack3:armhf (3.12.1-2) ... 988s Selecting previously unselected package python3-numpy. 988s Preparing to unpack .../005-python3-numpy_1%3a2.2.3+ds-5_armhf.deb ... 988s Unpacking python3-numpy (1:2.2.3+ds-5) ... 988s Selecting previously unselected package sgml-base. 988s Preparing to unpack .../006-sgml-base_1.31_all.deb ... 988s Unpacking sgml-base (1.31) ... 989s Selecting previously unselected package m4. 989s Preparing to unpack .../007-m4_1.4.19-7_armhf.deb ... 989s Unpacking m4 (1.4.19-7) ... 989s Selecting previously unselected package autoconf. 989s Preparing to unpack .../008-autoconf_2.72-3ubuntu1_all.deb ... 989s Unpacking autoconf (2.72-3ubuntu1) ... 989s Selecting previously unselected package autotools-dev. 989s Preparing to unpack .../009-autotools-dev_20220109.1_all.deb ... 989s Unpacking autotools-dev (20220109.1) ... 989s Selecting previously unselected package automake. 989s Preparing to unpack .../010-automake_1%3a1.17-3ubuntu1_all.deb ... 989s Unpacking automake (1:1.17-3ubuntu1) ... 989s Selecting previously unselected package autopoint. 989s Preparing to unpack .../011-autopoint_0.23.1-1_all.deb ... 989s Unpacking autopoint (0.23.1-1) ... 989s Selecting previously unselected package libtcl8.6:armhf. 989s Preparing to unpack .../012-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 989s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 989s Selecting previously unselected package libfreetype6:armhf. 989s Preparing to unpack .../013-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 989s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 989s Selecting previously unselected package fonts-dejavu-mono. 989s Preparing to unpack .../014-fonts-dejavu-mono_2.37-8_all.deb ... 989s Unpacking fonts-dejavu-mono (2.37-8) ... 989s Selecting previously unselected package fonts-dejavu-core. 989s Preparing to unpack .../015-fonts-dejavu-core_2.37-8_all.deb ... 989s Unpacking fonts-dejavu-core (2.37-8) ... 989s Selecting previously unselected package fontconfig-config. 989s Preparing to unpack .../016-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 990s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 990s Selecting previously unselected package libfontconfig1:armhf. 990s Preparing to unpack .../017-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 990s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 990s Selecting previously unselected package libxrender1:armhf. 990s Preparing to unpack .../018-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 990s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 990s Selecting previously unselected package libxft2:armhf. 990s Preparing to unpack .../019-libxft2_2.3.6-1build1_armhf.deb ... 990s Unpacking libxft2:armhf (2.3.6-1build1) ... 990s Selecting previously unselected package x11-common. 990s Preparing to unpack .../020-x11-common_1%3a7.7+23ubuntu3_all.deb ... 990s Unpacking x11-common (1:7.7+23ubuntu3) ... 990s Selecting previously unselected package libxss1:armhf. 990s Preparing to unpack .../021-libxss1_1%3a1.2.3-1build3_armhf.deb ... 990s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 990s Selecting previously unselected package libtk8.6:armhf. 990s Preparing to unpack .../022-libtk8.6_8.6.16-1_armhf.deb ... 990s Unpacking libtk8.6:armhf (8.6.16-1) ... 990s Selecting previously unselected package tk8.6-blt2.5. 990s Preparing to unpack .../023-tk8.6-blt2.5_2.5.3+dfsg-8_armhf.deb ... 990s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 990s Selecting previously unselected package blt. 990s Preparing to unpack .../024-blt_2.5.3+dfsg-8_armhf.deb ... 990s Unpacking blt (2.5.3+dfsg-8) ... 990s Selecting previously unselected package libc-dev-bin. 990s Preparing to unpack .../025-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 990s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 990s Selecting previously unselected package linux-libc-dev:armhf. 990s Preparing to unpack .../026-linux-libc-dev_6.14.0-10.10_armhf.deb ... 990s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 991s Selecting previously unselected package libcrypt-dev:armhf. 991s Preparing to unpack .../027-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 991s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 991s Selecting previously unselected package rpcsvc-proto. 991s Preparing to unpack .../028-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 991s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 991s Selecting previously unselected package libc6-dev:armhf. 991s Preparing to unpack .../029-libc6-dev_2.41-1ubuntu2_armhf.deb ... 991s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 991s Selecting previously unselected package libisl23:armhf. 991s Preparing to unpack .../030-libisl23_0.27-1_armhf.deb ... 991s Unpacking libisl23:armhf (0.27-1) ... 991s Selecting previously unselected package libmpc3:armhf. 991s Preparing to unpack .../031-libmpc3_1.3.1-1build2_armhf.deb ... 991s Unpacking libmpc3:armhf (1.3.1-1build2) ... 991s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 991s Preparing to unpack .../032-cpp-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 991s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 992s Selecting previously unselected package cpp-14. 992s Preparing to unpack .../033-cpp-14_14.2.0-17ubuntu3_armhf.deb ... 992s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 992s Selecting previously unselected package cpp-arm-linux-gnueabihf. 992s Preparing to unpack .../034-cpp-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 992s Unpacking cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 992s Selecting previously unselected package cpp. 992s Preparing to unpack .../035-cpp_4%3a14.2.0-1ubuntu1_armhf.deb ... 992s Unpacking cpp (4:14.2.0-1ubuntu1) ... 992s Selecting previously unselected package libcc1-0:armhf. 992s Preparing to unpack .../036-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 992s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 992s Selecting previously unselected package libgomp1:armhf. 992s Preparing to unpack .../037-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 992s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 992s Selecting previously unselected package libasan8:armhf. 992s Preparing to unpack .../038-libasan8_15-20250222-0ubuntu1_armhf.deb ... 992s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 992s Selecting previously unselected package libubsan1:armhf. 992s Preparing to unpack .../039-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 992s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 992s Selecting previously unselected package libgcc-14-dev:armhf. 992s Preparing to unpack .../040-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 992s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 992s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 992s Preparing to unpack .../041-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 992s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 993s Selecting previously unselected package gcc-14. 993s Preparing to unpack .../042-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 993s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 993s Selecting previously unselected package gcc-arm-linux-gnueabihf. 993s Preparing to unpack .../043-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 993s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 993s Selecting previously unselected package gcc. 993s Preparing to unpack .../044-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 993s Unpacking gcc (4:14.2.0-1ubuntu1) ... 993s Selecting previously unselected package libstdc++-14-dev:armhf. 993s Preparing to unpack .../045-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 993s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 993s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 993s Preparing to unpack .../046-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 993s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 994s Selecting previously unselected package g++-14. 994s Preparing to unpack .../047-g++-14_14.2.0-17ubuntu3_armhf.deb ... 994s Unpacking g++-14 (14.2.0-17ubuntu3) ... 994s Selecting previously unselected package g++-arm-linux-gnueabihf. 994s Preparing to unpack .../048-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 994s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 994s Selecting previously unselected package g++. 994s Preparing to unpack .../049-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 994s Unpacking g++ (4:14.2.0-1ubuntu1) ... 994s Selecting previously unselected package build-essential. 994s Preparing to unpack .../050-build-essential_12.10ubuntu1_armhf.deb ... 994s Unpacking build-essential (12.10ubuntu1) ... 994s Selecting previously unselected package cython3. 994s Preparing to unpack .../051-cython3_3.0.11+dfsg-2ubuntu2_armhf.deb ... 994s Unpacking cython3 (3.0.11+dfsg-2ubuntu2) ... 994s Selecting previously unselected package libdebhelper-perl. 994s Preparing to unpack .../052-libdebhelper-perl_13.24.1ubuntu2_all.deb ... 994s Unpacking libdebhelper-perl (13.24.1ubuntu2) ... 994s Selecting previously unselected package libtool. 994s Preparing to unpack .../053-libtool_2.5.4-4_all.deb ... 994s Unpacking libtool (2.5.4-4) ... 994s Selecting previously unselected package dh-autoreconf. 994s Preparing to unpack .../054-dh-autoreconf_20_all.deb ... 994s Unpacking dh-autoreconf (20) ... 994s Selecting previously unselected package libarchive-zip-perl. 994s Preparing to unpack .../055-libarchive-zip-perl_1.68-1_all.deb ... 994s Unpacking libarchive-zip-perl (1.68-1) ... 995s Selecting previously unselected package libfile-stripnondeterminism-perl. 995s Preparing to unpack .../056-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 995s Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... 995s Selecting previously unselected package dh-strip-nondeterminism. 995s Preparing to unpack .../057-dh-strip-nondeterminism_1.14.1-2_all.deb ... 995s Unpacking dh-strip-nondeterminism (1.14.1-2) ... 995s Selecting previously unselected package libdw1t64:armhf. 995s Preparing to unpack .../058-libdw1t64_0.192-4_armhf.deb ... 995s Unpacking libdw1t64:armhf (0.192-4) ... 995s Selecting previously unselected package debugedit. 995s Preparing to unpack .../059-debugedit_1%3a5.1-2_armhf.deb ... 995s Unpacking debugedit (1:5.1-2) ... 995s Selecting previously unselected package dwz. 995s Preparing to unpack .../060-dwz_0.15-1build6_armhf.deb ... 995s Unpacking dwz (0.15-1build6) ... 995s Selecting previously unselected package gettext. 995s Preparing to unpack .../061-gettext_0.23.1-1_armhf.deb ... 995s Unpacking gettext (0.23.1-1) ... 995s Selecting previously unselected package intltool-debian. 995s Preparing to unpack .../062-intltool-debian_0.35.0+20060710.6_all.deb ... 995s Unpacking intltool-debian (0.35.0+20060710.6) ... 995s Selecting previously unselected package po-debconf. 995s Preparing to unpack .../063-po-debconf_1.0.21+nmu1_all.deb ... 995s Unpacking po-debconf (1.0.21+nmu1) ... 995s Selecting previously unselected package debhelper. 995s Preparing to unpack .../064-debhelper_13.24.1ubuntu2_all.deb ... 995s Unpacking debhelper (13.24.1ubuntu2) ... 995s Selecting previously unselected package dh-python. 995s Preparing to unpack .../065-dh-python_6.20250308_all.deb ... 995s Unpacking dh-python (6.20250308) ... 995s Selecting previously unselected package xml-core. 995s Preparing to unpack .../066-xml-core_0.19_all.deb ... 995s Unpacking xml-core (0.19) ... 995s Selecting previously unselected package docutils-common. 995s Preparing to unpack .../067-docutils-common_0.21.2+dfsg-2_all.deb ... 995s Unpacking docutils-common (0.21.2+dfsg-2) ... 996s Selecting previously unselected package fontconfig. 996s Preparing to unpack .../068-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 996s Unpacking fontconfig (2.15.0-2ubuntu1) ... 996s Selecting previously unselected package fonts-font-awesome. 996s Preparing to unpack .../069-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 996s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 996s Selecting previously unselected package fonts-glyphicons-halflings. 996s Preparing to unpack .../070-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 996s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 996s Selecting previously unselected package fonts-lyx. 996s Preparing to unpack .../071-fonts-lyx_2.4.3-1_all.deb ... 996s Unpacking fonts-lyx (2.4.3-1) ... 996s Selecting previously unselected package fonts-mathjax. 996s Preparing to unpack .../072-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 996s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 996s Selecting previously unselected package libaec0:armhf. 996s Preparing to unpack .../073-libaec0_1.1.3-1_armhf.deb ... 996s Unpacking libaec0:armhf (1.1.3-1) ... 996s Selecting previously unselected package libboost-iostreams1.83.0:armhf. 996s Preparing to unpack .../074-libboost-iostreams1.83.0_1.83.0-4.1ubuntu2_armhf.deb ... 996s Unpacking libboost-iostreams1.83.0:armhf (1.83.0-4.1ubuntu2) ... 996s Selecting previously unselected package libpixman-1-0:armhf. 996s Preparing to unpack .../075-libpixman-1-0_0.44.0-3_armhf.deb ... 996s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 996s Selecting previously unselected package libxcb-render0:armhf. 996s Preparing to unpack .../076-libxcb-render0_1.17.0-2_armhf.deb ... 996s Unpacking libxcb-render0:armhf (1.17.0-2) ... 996s Selecting previously unselected package libxcb-shm0:armhf. 996s Preparing to unpack .../077-libxcb-shm0_1.17.0-2_armhf.deb 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1002s Unpacking libogg0:armhf (1.3.5-3build1) ... 1002s Selecting previously unselected package libopenbabel7. 1002s Preparing to unpack .../136-libopenbabel7_3.1.1+dfsg-11ubuntu3_armhf.deb ... 1002s Unpacking libopenbabel7 (3.1.1+dfsg-11ubuntu3) ... 1002s Selecting previously unselected package libpcre2-16-0:armhf. 1002s Preparing to unpack .../137-libpcre2-16-0_10.45-1_armhf.deb ... 1002s Unpacking libpcre2-16-0:armhf (10.45-1) ... 1002s Selecting previously unselected package proj-data. 1002s Preparing to unpack .../138-proj-data_9.5.1-1_all.deb ... 1002s Unpacking proj-data (9.5.1-1) ... 1003s Selecting previously unselected package libjbig0:armhf. 1003s Preparing to unpack .../139-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 1003s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 1003s Selecting previously unselected package libsharpyuv0:armhf. 1003s Preparing to unpack .../140-libsharpyuv0_1.5.0-0.1_armhf.deb ... 1003s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 1003s Selecting previously 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unselected package libqt5dbus5t64:armhf. 1004s Preparing to unpack .../151-libqt5dbus5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 1004s Unpacking libqt5dbus5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1004s Selecting previously unselected package libegl1:armhf. 1004s Preparing to unpack .../152-libegl1_1.7.0-1build1_armhf.deb ... 1004s Unpacking libegl1:armhf (1.7.0-1build1) ... 1004s Selecting previously unselected package libgles2:armhf. 1004s Preparing to unpack .../153-libgles2_1.7.0-1build1_armhf.deb ... 1004s Unpacking libgles2:armhf (1.7.0-1build1) ... 1004s Selecting previously unselected package libqt5network5t64:armhf. 1004s Preparing to unpack .../154-libqt5network5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 1004s Unpacking libqt5network5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1004s Selecting previously unselected package libsm6:armhf. 1004s Preparing to unpack .../155-libsm6_2%3a1.2.4-1_armhf.deb ... 1004s Unpacking libsm6:armhf (2:1.2.4-1) ... 1004s Selecting previously unselected package libxcb-icccm4:armhf. 1004s Preparing to unpack .../156-libxcb-icccm4_0.4.2-1_armhf.deb ... 1004s Unpacking libxcb-icccm4:armhf (0.4.2-1) ... 1004s Selecting previously unselected package libxcb-util1:armhf. 1004s Preparing to unpack .../157-libxcb-util1_0.4.1-1_armhf.deb ... 1004s Unpacking libxcb-util1:armhf (0.4.1-1) ... 1004s Selecting previously unselected package libxcb-image0:armhf. 1004s Preparing to unpack .../158-libxcb-image0_0.4.0-2build1_armhf.deb ... 1004s Unpacking libxcb-image0:armhf (0.4.0-2build1) ... 1004s Selecting previously unselected package libxcb-keysyms1:armhf. 1004s Preparing to unpack .../159-libxcb-keysyms1_0.4.1-1_armhf.deb ... 1004s Unpacking libxcb-keysyms1:armhf (0.4.1-1) ... 1004s Selecting previously unselected package libxcb-render-util0:armhf. 1004s Preparing to unpack .../160-libxcb-render-util0_0.3.10-1_armhf.deb ... 1004s Unpacking libxcb-render-util0:armhf (0.3.10-1) ... 1004s Selecting previously unselected package libxcb-shape0:armhf. 1005s 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previously unselected package python3-dev. 1014s Preparing to unpack .../197-python3-dev_3.13.2-2_armhf.deb ... 1014s Unpacking python3-dev (3.13.2-2) ... 1014s Selecting previously unselected package python3-all-dev. 1014s Preparing to unpack .../198-python3-all-dev_3.13.2-2_armhf.deb ... 1014s Unpacking python3-all-dev (3.13.2-2) ... 1014s Selecting previously unselected package python3-annotated-types. 1014s Preparing to unpack .../199-python3-annotated-types_0.7.0-1_all.deb ... 1014s Unpacking python3-annotated-types (0.7.0-1) ... 1015s Selecting previously unselected package python3-decorator. 1015s Preparing to unpack .../200-python3-decorator_5.1.1-5_all.deb ... 1015s Unpacking python3-decorator (5.1.1-5) ... 1015s Selecting previously unselected package python3-scipy. 1015s Preparing to unpack .../201-python3-scipy_1.14.1-4ubuntu2_armhf.deb ... 1015s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 1016s Selecting previously unselected package python3-spglib. 1016s Preparing to unpack .../202-python3-spglib_2.5.0-2build1_armhf.deb ... 1016s Unpacking python3-spglib (2.5.0-2build1) ... 1016s Selecting previously unselected package libopenjp2-7:armhf. 1016s Preparing to unpack .../203-libopenjp2-7_2.5.3-2_armhf.deb ... 1016s Unpacking libopenjp2-7:armhf (2.5.3-2) ... 1016s Selecting previously unselected package python3-pil:armhf. 1016s Preparing to unpack .../204-python3-pil_11.1.0-5build1_armhf.deb ... 1016s Unpacking python3-pil:armhf (11.1.0-5build1) ... 1016s Selecting previously unselected package python3.12-tk. 1016s Preparing to unpack .../205-python3.12-tk_3.12.9-1_armhf.deb ... 1016s Unpacking python3.12-tk (3.12.9-1) ... 1016s Selecting previously unselected package python3.13-tk. 1016s Preparing to unpack .../206-python3.13-tk_3.13.2-2_armhf.deb ... 1016s Unpacking python3.13-tk (3.13.2-2) ... 1016s Selecting previously unselected package python3-tk:armhf. 1016s Preparing to unpack .../207-python3-tk_3.13.1-1_armhf.deb ... 1016s Unpacking python3-tk:armhf (3.13.1-1) ... 1016s Selecting previously unselected package python3-pil.imagetk:armhf. 1016s Preparing to unpack .../208-python3-pil.imagetk_11.1.0-5build1_armhf.deb ... 1016s Unpacking python3-pil.imagetk:armhf (11.1.0-5build1) ... 1016s Selecting previously unselected package python3-contourpy. 1016s Preparing to unpack .../209-python3-contourpy_1.3.1-1build1_armhf.deb ... 1016s Unpacking python3-contourpy (1.3.1-1build1) ... 1016s Selecting previously unselected package python3-cycler. 1016s Preparing to unpack .../210-python3-cycler_0.12.1-1_all.deb ... 1016s Unpacking python3-cycler (0.12.1-1) ... 1016s Selecting previously unselected package python3-brotli. 1016s Preparing to unpack .../211-python3-brotli_1.1.0-2build4_armhf.deb ... 1016s Unpacking python3-brotli (1.1.0-2build4) ... 1016s Selecting previously unselected package python3-platformdirs. 1016s Preparing to unpack .../212-python3-platformdirs_4.3.6-1_all.deb ... 1016s Unpacking python3-platformdirs 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unpack .../218-python3-ufolib2_0.17.0+dfsg1-1_all.deb ... 1018s Unpacking python3-ufolib2 (0.17.0+dfsg1-1) ... 1018s Selecting previously unselected package python3-unicodedata2. 1018s Preparing to unpack .../219-python3-unicodedata2_15.1.0+ds-1build3_armhf.deb ... 1018s Unpacking python3-unicodedata2 (15.1.0+ds-1build3) ... 1018s Selecting previously unselected package unicode-data. 1018s Preparing to unpack .../220-unicode-data_15.1.0-1_all.deb ... 1018s Unpacking unicode-data (15.1.0-1) ... 1018s Selecting previously unselected package python3-fonttools. 1018s Preparing to unpack .../221-python3-fonttools_4.55.3-2build1_armhf.deb ... 1018s Unpacking python3-fonttools (4.55.3-2build1) ... 1018s Selecting previously unselected package python3-kiwisolver. 1018s Preparing to unpack .../222-python3-kiwisolver_1.4.7-3build1_armhf.deb ... 1018s Unpacking python3-kiwisolver (1.4.7-3build1) ... 1018s Selecting previously unselected package python3-matplotlib. 1019s Preparing to unpack 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... 1020s Selecting previously unselected package python3-defusedxml. 1020s Preparing to unpack .../229-python3-defusedxml_0.7.1-3_all.deb ... 1020s Unpacking python3-defusedxml (0.7.1-3) ... 1020s Selecting previously unselected package python3-dnspython. 1020s Preparing to unpack .../230-python3-dnspython_2.7.0-1ubuntu1_all.deb ... 1020s Unpacking python3-dnspython (2.7.0-1ubuntu1) ... 1020s Selecting previously unselected package python3-roman. 1020s Preparing to unpack .../231-python3-roman_5.0-1_all.deb ... 1020s Unpacking python3-roman (5.0-1) ... 1021s Selecting previously unselected package python3-docutils. 1021s Preparing to unpack .../232-python3-docutils_0.21.2+dfsg-2_all.deb ... 1021s Unpacking python3-docutils (0.21.2+dfsg-2) ... 1021s Selecting previously unselected package python3-email-validator. 1021s Preparing to unpack .../233-python3-email-validator_2.2.0-1_all.deb ... 1021s Unpacking python3-email-validator (2.2.0-1) ... 1021s Selecting previously unselected package python3-fastjsonschema. 1021s Preparing to unpack .../234-python3-fastjsonschema_2.21.1-1_all.deb ... 1021s Unpacking python3-fastjsonschema (2.21.1-1) ... 1021s Selecting previously unselected package python3-frozendict. 1021s Preparing to unpack .../235-python3-frozendict_2.4.6-1_all.deb ... 1021s Unpacking python3-frozendict (2.4.6-1) ... 1021s Selecting previously unselected package python3-h5py-serial. 1021s Preparing to unpack .../236-python3-h5py-serial_3.13.0-1_armhf.deb ... 1021s Unpacking python3-h5py-serial (3.13.0-1) ... 1021s Selecting previously unselected package python3-h5py. 1021s Preparing to unpack .../237-python3-h5py_3.13.0-1_all.deb ... 1021s Unpacking python3-h5py (3.13.0-1) ... 1021s Selecting previously unselected package python3-imagesize. 1021s Preparing to unpack .../238-python3-imagesize_1.4.1-1_all.deb ... 1021s Unpacking python3-imagesize (1.4.1-1) ... 1021s Selecting previously unselected package python3-iniconfig. 1021s Preparing to unpack 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python3-pydantic (2.10.6-1) ... 1023s Selecting previously unselected package python3-tqdm. 1023s Preparing to unpack .../250-python3-tqdm_4.67.1-2_all.deb ... 1023s Unpacking python3-tqdm (4.67.1-2) ... 1023s Selecting previously unselected package python3-ruamel.yaml.clib. 1023s Preparing to unpack .../251-python3-ruamel.yaml.clib_0.2.12+ds-1build1_armhf.deb ... 1023s Unpacking python3-ruamel.yaml.clib (0.2.12+ds-1build1) ... 1023s Selecting previously unselected package python3-ruamel.yaml. 1023s Preparing to unpack .../252-python3-ruamel.yaml_0.18.10+ds-1_all.deb ... 1023s Unpacking python3-ruamel.yaml (0.18.10+ds-1) ... 1023s Selecting previously unselected package python3-monty. 1023s Preparing to unpack .../253-python3-monty_2025.1.9-1_all.deb ... 1023s Unpacking python3-monty (2025.1.9-1) ... 1023s Selecting previously unselected package python3-nbformat. 1023s Preparing to unpack .../254-python3-nbformat_5.9.1-1_all.deb ... 1023s Unpacking python3-nbformat (5.9.1-1) ... 1023s Selecting previously unselected package python3-netcdf4. 1023s Preparing to unpack .../255-python3-netcdf4_1.7.2-1build4_armhf.deb ... 1023s Unpacking python3-netcdf4 (1.7.2-1build4) ... 1023s Selecting previously unselected package python3-networkx. 1023s Preparing to unpack .../256-python3-networkx_3.2.1-4ubuntu1_all.deb ... 1023s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 1025s Selecting previously unselected package python3-openbabel. 1025s Preparing to unpack .../257-python3-openbabel_3.1.1+dfsg-11ubuntu3_armhf.deb ... 1025s Unpacking python3-openbabel (3.1.1+dfsg-11ubuntu3) ... 1025s Selecting previously unselected package python3-palettable. 1025s Preparing to unpack .../258-python3-palettable_3.3.3-1_all.deb ... 1025s Unpacking python3-palettable (3.3.3-1) ... 1026s Selecting previously unselected package python3-phonopy. 1026s Preparing to unpack .../259-python3-phonopy_2.35.0-1_armhf.deb ... 1026s Unpacking python3-phonopy (2.35.0-1) ... 1026s Selecting previously unselected package python3-tenacity. 1026s Preparing to unpack .../260-python3-tenacity_9.0.0-0ubuntu1_all.deb ... 1026s Unpacking python3-tenacity (9.0.0-0ubuntu1) ... 1026s Selecting previously unselected package python3-plotly. 1026s Preparing to unpack .../261-python3-plotly_5.20.0+dfsg-1_all.deb ... 1026s Unpacking python3-plotly (5.20.0+dfsg-1) ... 1029s Selecting previously unselected package python3-pluggy. 1029s Preparing to unpack .../262-python3-pluggy_1.5.0-1_all.deb ... 1029s Unpacking python3-pluggy (1.5.0-1) ... 1029s Selecting previously unselected package python3-pybtex. 1029s Preparing to unpack .../263-python3-pybtex_0.24.0-4_all.deb ... 1029s Unpacking python3-pybtex (0.24.0-4) ... 1029s Selecting previously unselected package python3-tabulate. 1029s Preparing to unpack .../264-python3-tabulate_0.9.0-1_all.deb ... 1029s Unpacking python3-tabulate (0.9.0-1) ... 1029s Selecting previously unselected package python3-uncertainties. 1029s Preparing to unpack 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1033s Setting up libarchive-zip-perl (1.68-1) ... 1033s Setting up libglvnd0:armhf (1.7.0-1build1) ... 1033s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1033s Setting up python3-alabaster (0.7.16-0.1) ... 1033s Setting up python3-unicodedata2 (15.1.0+ds-1build3) ... 1033s Setting up fonts-lyx (2.4.3-1) ... 1033s Setting up libxcb-glx0:armhf (1.17.0-2) ... 1033s Setting up python3-tenacity (9.0.0-0ubuntu1) ... 1033s Setting up libdebhelper-perl (13.24.1ubuntu2) ... 1033s Setting up python3-tqdm (4.67.1-2) ... 1034s Setting up libxcb-keysyms1:armhf (0.4.1-1) ... 1034s Setting up libxcb-shape0:armhf (1.17.0-2) ... 1034s Setting up python3-ruamel.yaml.clib (0.2.12+ds-1build1) ... 1034s Setting up x11-common (1:7.7+23ubuntu3) ... 1034s Setting up python3-frozendict (2.4.6-1) ... 1035s Setting up libdeflate0:armhf (1.23-1) ... 1035s Setting up linux-libc-dev:armhf (6.14.0-10.10) ... 1035s Setting up python3-tabulate (0.9.0-1) ... 1035s Setting up m4 (1.4.19-7) ... 1035s 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libxcb-xkb1:armhf (1.17.0-2) ... 1038s Setting up libxcb-image0:armhf (0.4.0-2build1) ... 1038s Setting up libdw1t64:armhf (0.192-4) ... 1038s Setting up python3-fs (2.4.16-7) ... 1038s Setting up libxcb-present0:armhf (1.17.0-2) ... 1038s Setting up unicode-data (15.1.0-1) ... 1038s Setting up libsymspg2:armhf (2.5.0-2build1) ... 1038s Setting up python3-bson (4.10.1-5build1) ... 1039s Setting up python3-palettable (3.3.3-1) ... 1039s Setting up python3-roman (5.0-1) ... 1039s Setting up libqt5core5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1039s Setting up python3-decorator (5.1.1-5) ... 1040s Setting up autotools-dev (20220109.1) ... 1040s Setting up libblas3:armhf (3.12.1-2) ... 1040s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 1040s Setting up libxcb-xinerama0:armhf (1.17.0-2) ... 1040s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 1040s Setting up 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1042s Setting up libtcl8.6:armhf (8.6.16+dfsg-1) ... 1042s Setting up autopoint (0.23.1-1) ... 1042s Setting up fonts-dejavu-core (2.37-8) ... 1042s Setting up libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 1042s Setting up python3-toml (0.10.2-1) ... 1043s Setting up python3-installer (0.7.0+dfsg1-3) ... 1043s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 1043s Setting up libvulkan1:armhf (1.4.304.0-1) ... 1043s Setting up autoconf (2.72-3ubuntu1) ... 1043s Setting up python3-pluggy (1.5.0-1) ... 1043s Setting up libwebp7:armhf (1.5.0-0.1) ... 1043s Setting up python3-pybtex (0.24.0-4) ... 1043s Setting up libubsan1:armhf (15-20250222-0ubuntu1) ... 1043s Setting up python3-fastjsonschema (2.21.1-1) ... 1044s Setting up python3-ruamel.yaml (0.18.10+ds-1) ... 1044s Setting up dwz (0.15-1build6) ... 1044s Setting up libmpich12:armhf (4.2.1-5) ... 1044s Setting up libmtdev1t64:armhf (1.1.7-1) ... 1044s Setting up libxshmfence1:armhf (1.3-1build5) ... 1044s Setting up 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... 1047s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 1047s Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 1047s Setting up python3-sympy (1.13.3-5) ... 1056s Setting up libice6:armhf (2:1.1.1-1) ... 1056s Setting up mesa-libgallium:armhf (25.0.1-2ubuntu1) ... 1056s Setting up liblapack3:armhf (3.12.1-2) ... 1056s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 1056s Setting up libqt5dbus5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1056s Setting up gettext (0.23.1-1) ... 1056s Setting up libgbm1:armhf (25.0.1-2ubuntu1) ... 1056s Setting up libwacom9:armhf (2.14.0-1) ... 1056s Setting up pybuild-plugin-pyproject (6.20250308) ... 1056s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 1056s Setting up python3-pytest (8.3.5-1) ... 1057s Setting up libwebpdemux2:armhf (1.5.0-0.1) ... 1057s Setting up libgl1-mesa-dri:armhf (25.0.1-2ubuntu1) ... 1057s Setting up libqt5network5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1057s Setting up hwloc-nox (2.12.0-1) ... 1057s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 1057s Setting up python3-nbformat (5.9.1-1) ... 1057s Setting up python3-bs4 (4.13.3-2) ... 1057s Setting up libinput-bin (1.27.1-1) ... 1057s Setting up libtbbbind-2-5:armhf (2022.0.0-2) ... 1057s Setting up intltool-debian (0.35.0+20060710.6) ... 1057s Setting up libmaeparser1:armhf (1.3.1-1build1) ... 1057s Setting up libegl-mesa0:armhf (25.0.1-2ubuntu1) ... 1057s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 1057s Setting up packmol (1:20.15.3-1) ... 1057s Setting up python3-pydantic (2.10.6-1) ... 1058s Setting up libraqm0:armhf (0.10.2-1) ... 1058s Setting up python3-plotly (5.20.0+dfsg-1) ... 1071s Setting up python3-numpy (1:2.2.3+ds-5) ... 1074s Setting up libjs-sphinxdoc (8.1.3-4) ... 1074s Setting up cpp-14 (14.2.0-17ubuntu3) ... 1074s Setting up dh-strip-nondeterminism (1.14.1-2) ... 1074s Setting up libhdf5-310:armhf (1.14.5+repack-3) ... 1074s Setting up python3-lxml:armhf (5.3.1-1build1) ... 1074s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 1074s Setting up xml-core (0.19) ... 1074s Setting up libegl1:armhf (1.7.0-1build1) ... 1074s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 1074s Setting up python3-contourpy (1.3.1-1build1) ... 1074s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 1074s Setting up python3-spglib (2.5.0-2build1) ... 1075s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 1075s Setting up libsm6:armhf (2:1.2.4-1) ... 1075s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 1075s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 1075s Setting up python3-uncertainties (3.2.2-1) ... 1075s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 1075s Setting up libinput10:armhf (1.27.1-1) ... 1075s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3) ... 1075s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 1075s Setting up fontconfig (2.15.0-2ubuntu1) ... 1077s Regenerating fonts cache... done. 1077s Setting up libxft2:armhf (2.3.6-1build1) ... 1077s Setting up libglx-mesa0:armhf (25.0.1-2ubuntu1) ... 1077s Setting up python3-scipy (1.14.1-4ubuntu2) ... 1082s Setting up libglx0:armhf (1.7.0-1build1) ... 1082s Setting up libproj25:armhf (9.5.1-1) ... 1082s Setting up mpich (4.2.1-5) ... 1082s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 1082s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 1082s Setting up po-debconf (1.0.21+nmu1) ... 1082s Setting up libtk8.6:armhf (8.6.16-1) ... 1082s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-8build1) ... 1082s Setting up python3.12-tk (3.12.9-1) ... 1083s Setting up libnetcdf22:armhf (1:4.9.3-1) ... 1083s Setting up mpi-default-bin (1.18) ... 1083s Setting up python3-h5py-serial (3.13.0-1) ... 1083s Setting up libtbb12:armhf (2022.0.0-2) ... 1083s Setting up python3-mpi4py (4.0.1-6ubuntu1) ... 1083s Setting up python-pymatgen-doc (2025.2.18+dfsg1-4) ... 1083s Setting up libcairo2:armhf (1.18.2-2) ... 1083s Setting up python3.13-tk (3.13.2-2) ... 1084s Setting up gcc-14 (14.2.0-17ubuntu3) ... 1084s Setting up python3-pil:armhf (11.1.0-5build1) ... 1084s Setting up libqt5gui5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1084s Setting up libgl1:armhf (1.7.0-1build1) ... 1084s Setting up libexpat1-dev:armhf (2.6.4-1) ... 1084s Setting up python3-pandas (2.2.3+dfsg-8build1) ... 1093s Setting up libtheoradec1:armhf (1.2.0~alpha1+dfsg-5) ... 1093s Setting up sphinx-common (8.1.3-4) ... 1093s Setting up python3-h5py (3.13.0-1) ... 1093s Setting up python3-cftime (1.6.4-2) ... 1093s Setting up libglew2.2:armhf (2.2.0-4build1) ... 1093s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1093s Setting up cpp (4:14.2.0-1ubuntu1) ... 1093s Setting up python3-monty (2025.1.9-1) ... 1094s Setting up g++-14 (14.2.0-17ubuntu3) ... 1094s Setting up python3-netcdf4 (1.7.2-1build4) ... 1094s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 1094s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 1094s Setting up libtool (2.5.4-4) ... 1094s Setting up libqt5widgets5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 1094s Setting up blt (2.5.3+dfsg-8) ... 1094s Setting up libopenbabel7 (3.1.1+dfsg-11ubuntu3) ... 1094s Setting up python3-tk:armhf (3.13.1-1) ... 1094s Setting up gcc (4:14.2.0-1ubuntu1) ... 1094s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 1094s Setting up dh-autoreconf (20) ... 1094s Setting up libtheoraenc1:armhf (1.2.0~alpha1+dfsg-5) ... 1094s Setting up python3-pil.imagetk:armhf (11.1.0-5build1) ... 1094s Setting up libpython3.13-dev:armhf (3.13.2-2) ... 1094s Setting up libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu1) ... 1094s Setting up g++ (4:14.2.0-1ubuntu1) ... 1094s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1094s Setting up build-essential (12.10ubuntu1) ... 1094s Setting up libpython3-dev:armhf (3.13.2-2) ... 1094s Setting up libvtk9.3-qt:armhf (9.3.0+dfsg1-4ubuntu1) ... 1094s Setting up python3-openbabel (3.1.1+dfsg-11ubuntu3) ... 1094s Setting up python3.13-dev (3.13.2-2) ... 1094s Setting up debhelper (13.24.1ubuntu2) ... 1094s Setting up libpython3-all-dev:armhf (3.13.2-2) ... 1094s Setting up python3-dev (3.13.2-2) ... 1094s Setting up python3-all-dev (3.13.2-2) ... 1094s Setting up python3-vtk9 (9.3.0+dfsg1-4ubuntu1) ... 1095s /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S' 1095s patn = re.compile (" \S") 1095s Setting up python3-fonttools (4.55.3-2build1) ... 1096s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 1097s Setting up python3-matplotlib (3.8.3-7build1) ... 1099s Setting up python3-ase (3.23.0-1ubuntu1) ... 1102s Setting up python3-phonopy (2.35.0-1) ... 1103s Setting up python3-pymatgen (2025.2.18+dfsg1-4) ... 1105s Processing triggers for libc-bin (2.41-1ubuntu2) ... 1105s Processing triggers for man-db (2.13.0-1) ... 1107s Processing triggers for udev (257.3-1ubuntu3) ... 1108s Processing triggers for install-info (7.1.1-1) ... 1108s Processing triggers for sgml-base (1.31) ... 1108s Setting up docutils-common (0.21.2+dfsg-2) ... 1108s Processing triggers for sgml-base (1.31) ... 1108s Setting up python3-docutils (0.21.2+dfsg-2) ... 1109s Setting up python3-sphinx (8.1.3-4) ... 1110s Setting up python3-sphinxcontrib.jquery (4.1-5) ... 1110s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 1120s autopkgtest [15:52:25]: test test-pymatgen: [----------------------- 1123s skipping tests with SKIP_TEST_LIST=TestGenKpt TestHighSymmetryPoint test_from_multi_jobs_file test_from_string test_read_molecule test_read_nbo test_read_negative test_read_plots test_read_write_nbo7 test_all test_custom_smd_write test_sets test_rotor_search_rrs BSDOSPlotterTest test_cdft_dc_parsing test_get_structure_by_id test_CifWriter test_read_write test_init test_get_site_symmetries test_babel_PC_with_RO_depth_0_vs_depth_10 test_fit test_rotor_search_wrs 1160s ============================= test session starts ============================== 1160s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 1160s rootdir: /tmp/autopkgtest.mOfBxw/build.ALT/src 1160s configfile: pyproject.toml 1160s plugins: typeguard-4.4.2 1160s collected 3117 items / 294 deselected / 7 skipped / 2823 selected 1160s 1161s tests/alchemy/test_filters.py ....... 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[100%] 2866s 2866s =============================== warnings summary =============================== 2866s tests/analysis/chemenv/utils/test_func_utils.py::TestFuncUtils::test_csm_infinite_ratio_function 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/chemenv/utils/math_utils.py:333: RuntimeWarning: divide by zero encountered in scalar divide 2866s return np.where(np.isclose(xx, 0.0), aa * float("inf"), aa * np.power(xx - 1.0, 2) / xx) 2866s 2866s tests/analysis/chemenv/utils/test_func_utils.py::TestFuncUtils::test_csm_infinite_ratio_function 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/chemenv/utils/math_utils.py:351: RuntimeWarning: divide by zero encountered in scalar divide 2866s aa * np.power(xx - 1.0, 2) / xx**2.0, 2866s 2866s tests/analysis/elasticity/test_elastic.py: 96974 warnings 2866s tests/analysis/elasticity/test_strain.py: 4 warnings 2866s tests/analysis/elasticity/test_stress.py: 8 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 16 warnings 2866s tests/analysis/test_piezo.py: 8 warnings 2866s tests/core/test_tensors.py: 468 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:364: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 48487 warnings 2866s tests/analysis/elasticity/test_strain.py: 2 warnings 2866s tests/analysis/elasticity/test_stress.py: 4 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 8 warnings 2866s tests/analysis/test_piezo.py: 4 warnings 2866s tests/core/test_tensors.py: 234 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/_methods.py:64: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 5280 warnings 2866s tests/analysis/elasticity/test_strain.py: 120 warnings 2866s tests/analysis/elasticity/test_stress.py: 3 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 360 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 1776 warnings 2866s tests/analysis/test_nmr.py: 15 warnings 2866s tests/core/test_tensors.py: 215 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:287: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 14329 warnings 2866s tests/analysis/elasticity/test_strain.py: 363 warnings 2866s tests/analysis/elasticity/test_stress.py: 31 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 1272 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 7104 warnings 2866s tests/analysis/test_nmr.py: 10 warnings 2866s tests/analysis/test_piezo.py: 63 warnings 2866s tests/core/test_tensors.py: 10977 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/numeric.py:2447: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 1788 warnings 2866s tests/analysis/elasticity/test_strain.py: 36 warnings 2866s tests/analysis/elasticity/test_stress.py: 2 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 159 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 888 warnings 2866s tests/analysis/test_piezo.py: 6 warnings 2866s tests/core/test_tensors.py: 1369 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/numeric.py:2448: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 1793 warnings 2866s tests/analysis/elasticity/test_strain.py: 51 warnings 2866s tests/analysis/elasticity/test_stress.py: 5 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 159 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 888 warnings 2866s tests/analysis/test_nmr.py: 2 warnings 2866s tests/analysis/test_piezo.py: 9 warnings 2866s tests/core/test_tensors.py: 1374 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/numeric.py:2449: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 1910 warnings 2866s tests/analysis/elasticity/test_strain.py: 108 warnings 2866s tests/analysis/elasticity/test_stress.py: 17 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 159 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 888 warnings 2866s tests/analysis/test_nmr.py: 16 warnings 2866s tests/analysis/test_piezo.py: 18 warnings 2866s tests/core/test_tensors.py: 1629 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/_methods.py:73: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 52 warnings 2866s tests/analysis/elasticity/test_strain.py: 40 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 162 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 592 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/strain.py:196: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 5 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 296 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/elastic.py:92: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 5 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 81 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 592 warnings 2866s tests/core/test_tensors.py: 1 warning 2866s /usr/lib/python3/dist-packages/numpy/_core/_methods.py:52: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 1174 warnings 2866s tests/core/test_tensors.py: 54 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:110: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py::TestElasticTensor::test_from_independent_strains 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/analysis/elasticity/test_elastic.py:228: UserWarning: 2866s 2866s Extra strain states in strain-stress pairs are neglected in independent strain fitting 2866s 2866s tests/analysis/elasticity/test_elastic.py: 12 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/elastic.py:482: UserWarning: 2866s 2866s Tensor is not symmetric, information may be lost in Voigt conversion. 2866s 2866s tests/analysis/elasticity/test_elastic.py: 30 warnings 2866s tests/analysis/elasticity/test_strain.py: 18 warnings 2866s tests/analysis/elasticity/test_stress.py: 4 warnings 2866s tests/analysis/test_nmr.py: 4 warnings 2866s tests/analysis/test_piezo.py: 3 warnings 2866s tests/core/test_tensors.py: 84 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:760: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 28 warnings 2866s tests/analysis/elasticity/test_strain.py: 4 warnings 2866s tests/analysis/elasticity/test_stress.py: 1 warning 2866s tests/analysis/test_nmr.py: 2 warnings 2866s tests/core/test_tensors.py: 84 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:761: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 99 warnings 2866s tests/analysis/elasticity/test_strain.py: 57 warnings 2866s tests/analysis/elasticity/test_stress.py: 12 warnings 2866s tests/analysis/test_nmr.py: 12 warnings 2866s tests/analysis/test_piezo.py: 9 warnings 2866s tests/core/test_tensors.py: 255 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:773: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 58 warnings 2866s tests/analysis/elasticity/test_strain.py: 22 warnings 2866s tests/analysis/elasticity/test_stress.py: 5 warnings 2866s tests/analysis/test_nmr.py: 6 warnings 2866s tests/analysis/test_piezo.py: 3 warnings 2866s tests/core/test_tensors.py: 168 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:815: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 28 warnings 2866s tests/analysis/elasticity/test_strain.py: 4 warnings 2866s tests/analysis/elasticity/test_stress.py: 1 warning 2866s tests/analysis/test_nmr.py: 2 warnings 2866s tests/core/test_tensors.py: 84 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:814: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 58 warnings 2866s tests/analysis/elasticity/test_strain.py: 22 warnings 2866s tests/analysis/elasticity/test_stress.py: 5 warnings 2866s tests/analysis/test_nmr.py: 6 warnings 2866s tests/analysis/test_piezo.py: 3 warnings 2866s tests/core/test_tensors.py: 168 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:818: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 28 warnings 2866s tests/analysis/elasticity/test_strain.py: 4 warnings 2866s tests/analysis/elasticity/test_stress.py: 1 warning 2866s tests/analysis/test_nmr.py: 2 warnings 2866s tests/core/test_tensors.py: 84 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:817: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 56 warnings 2866s tests/analysis/elasticity/test_strain.py: 8 warnings 2866s tests/analysis/elasticity/test_stress.py: 2 warnings 2866s tests/analysis/test_nmr.py: 4 warnings 2866s tests/core/test_tensors.py: 168 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:842: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 124 warnings 2866s tests/analysis/elasticity/test_strain.py: 60 warnings 2866s tests/analysis/elasticity/test_stress.py: 13 warnings 2866s tests/analysis/test_nmr.py: 6 warnings 2866s tests/analysis/test_piezo.py: 9 warnings 2866s tests/core/test_tensors.py: 338 warnings 2866s /usr/lib/python3/dist-packages/numpy/_core/numeric.py:2451: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 33 warnings 2866s tests/analysis/elasticity/test_strain.py: 19 warnings 2866s tests/analysis/elasticity/test_stress.py: 4 warnings 2866s tests/analysis/test_nmr.py: 4 warnings 2866s tests/analysis/test_piezo.py: 3 warnings 2866s tests/core/test_tensors.py: 85 warnings 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:851: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 36 warnings 2866s tests/core/test_tensors.py: 8 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:629: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 6912 warnings 2866s tests/core/test_tensors.py: 1536 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:633: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 6912 warnings 2866s tests/core/test_tensors.py: 1536 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:634: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 6912 warnings 2866s tests/core/test_tensors.py: 1536 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:635: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 3456 warnings 2866s tests/core/test_tensors.py: 768 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:636: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 6912 warnings 2866s tests/core/test_tensors.py: 1536 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:637: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 3474 warnings 2866s tests/core/test_tensors.py: 2775 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:327: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 36 warnings 2866s tests/core/test_tensors.py: 8 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:665: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 18 warnings 2866s tests/core/test_tensors.py: 4 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:666: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 11 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/elastic.py:584: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 28 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/elastic.py:742: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_elastic.py: 2 warnings 2866s tests/analysis/interfaces/test_coherent_interface.py: 81 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 296 warnings 2866s tests/core/test_tensors.py: 1 warning 2866s /usr/lib/python3/dist-packages/numpy/_core/fromnumeric.py:1895: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s tests/analysis/elasticity/test_strain.py::TestDeformation::test_independence 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/strain.py:63: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_strain.py: 12 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/strain.py:253: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/stress.py:70: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/stress.py:77: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/stress.py:89: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/elasticity/test_stress.py::TestStress::test_properties 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/stress.py:101: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/interfaces/test_coherent_interface.py: 81 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 296 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/strain.py:235: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/interfaces/test_coherent_interface.py: 81 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 296 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/elasticity/strain.py:237: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/interfaces/test_coherent_interface.py: 78 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 592 warnings 2866s tests/core/test_tensors.py: 82 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:1021: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/interfaces/test_coherent_interface.py: 78 warnings 2866s tests/analysis/interfaces/test_substrate_analyzer.py: 592 warnings 2866s tests/core/test_tensors.py: 82 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:992: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_graphs.py: 17 warnings 2866s tests/command_line/test_critic2_caller.py: 5 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/command_line/critic2_caller.py:490: DeprecationWarning: 2866s 2866s Parsing critic2 standard output is deprecated and will not be maintained, please use the native JSON output in the future. 2866s 2866s tests/analysis/test_interface_reactions.py: 24 warnings 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/analysis/test_interface_reactions.py:368: DeprecationWarning: 2866s 2866s Arrays of 2-dimensional vectors are deprecated. Use arrays of 3-dimensional vectors instead. (deprecated in NumPy 2.0) 2866s 2866s tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/nmr.py:91: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/nmr.py:104: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_notations 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/nmr.py:112: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_nmr.py::TestChemicalShieldingNotation::test_principal_axis_system 2866s tests/analysis/test_nmr.py::TestElectricFieldGradient::test_principal_axis_system 2866s /usr/lib/python3/dist-packages/numpy/testing/_private/utils.py:850: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 120 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:385: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 590 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:387: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 120 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:388: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 60 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:396: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 1040 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:393: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 14160 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:568: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 2880 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:571: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 1440 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:581: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 24960 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:578: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 944 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:437: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 192 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:439: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 96 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:449: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 1664 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:446: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 88 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:126: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 88 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:145: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 84 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:243: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_piezo_sensitivity.py: 98 warnings 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/piezo_sensitivity.py:244: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s tests/analysis/test_pourbaix_diagram.py::TestPourbaixDiagram::test_multielement_parallel 2866s /usr/lib/python3.13/multiprocessing/popen_fork.py:67: DeprecationWarning: 2866s 2866s This process (pid=4534) is multi-threaded, use of fork() may lead to deadlocks in the child. 2866s 2866s tests/analysis/test_quasirrho.py::TestQuasiRRHO::test_extreme_temperature_and_pressure 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/quasirrho.py:243: RuntimeWarning: 2866s 2866s overflow encountered in exp 2866s 2866s tests/analysis/test_quasirrho.py::TestQuasiRRHO::test_extreme_temperature_and_pressure 2866s /usr/lib/python3/dist-packages/pymatgen/analysis/quasirrho.py:244: RuntimeWarning: 2866s 2866s overflow encountered in exp 2866s 2866s tests/core/test_structure.py::TestStructure::test_rotate_sites 2866s /usr/lib/python3/dist-packages/pymatgen/core/structure.py:4699: RuntimeWarning: 2866s 2866s invalid value encountered in divide 2866s 2866s tests/core/test_tensors.py: 18 warnings 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/core/test_tensors.py:207: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s tests/core/test_tensors.py::TestTensor::test_convert_to_ieee 2866s /usr/lib/python3/dist-packages/numpy/_core/_methods.py:44: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestTensor::test_round 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/core/test_tensors.py:376: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestTensor::test_round 2866s /usr/lib/python3/dist-packages/numpy/_core/fromnumeric.py:48: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestTensorCollection::test_list_based_functions 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/core/test_tensors.py:409: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestSquareTensor::test_get_scaled 2866s /usr/lib/python3/dist-packages/pymatgen/core/tensors.py:1003: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestSquareTensor::test_properties 2866s tests/core/test_tensors.py::TestSquareTensor::test_properties 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/core/test_tensors.py:524: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/core/test_tensors.py::TestSquareTensor::test_refine_rotation 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/core/test_tensors.py:556: DeprecationWarning: 2866s 2866s __array_wrap__ must accept context and return_scalar arguments (positionally) in the future. (Deprecated NumPy 2.0) 2866s 2866s tests/electronic_structure/test_bandstructure.py::TestLobsterBandStructureSymmLine::test_proj_bandstructure_plot 2866s /usr/lib/python3/dist-packages/pymatgen/electronic_structure/plotter.py:1119: RuntimeWarning: 2866s 2866s More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`. 2866s 2866s tests/electronic_structure/test_dos.py::TestFermiDos::test_doping_fermi 2866s /usr/lib/python3/dist-packages/pymatgen/electronic_structure/dos.py:527: RuntimeWarning: 2866s 2866s divide by zero encountered in divide 2866s 2866s tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries 2866s tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries 2866s tests/entries/test_compatibility.py::TestMaterialsProjectCompatibility::test_parallel_process_entries 2866s /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: 2866s 2866s This process (pid=4534) is multi-threaded, use of fork() may lead to deadlocks in the child. 2866s 2866s tests/io/lammps/test_data.py::TestLammpsData::test_get_str 2866s tests/io/lammps/test_data.py::TestLammpsData::test_write_file 2866s tests/io/lammps/test_data.py::TestLammpsData::test_write_file 2866s tests/io/lammps/test_data.py::TestCombinedData::test_as_lammpsdata 2866s tests/io/lammps/test_data.py::TestCombinedData::test_get_str 2866s /usr/lib/python3/dist-packages/numpy/_core/fromnumeric.py:57: FutureWarning: 2866s 2866s 'DataFrame.swapaxes' is deprecated and will be removed in a future version. Please use 'DataFrame.transpose' instead. 2866s 2866s tests/io/test_cif.py::TestCifIO::test_cif_writer_write_file 2866s /usr/lib/python3/dist-packages/pymatgen/io/cif.py:1767: FutureWarning: 2866s 2866s We strongly discourage using implicit binary/text `mode`, and this would not be allowed after 2025-06-01. I.e. you should pass t/b in `mode`. 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_dfpt_ionic 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:366: UnconvergedVASPWarning: 2866s 2866s /usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.ionic.xml.gz is an unconverged VASP run. 2866s Electronic convergence reached: True. 2866s Ionic convergence reached: False. 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_dfpt_unconverged 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:373: UnconvergedVASPWarning: 2866s 2866s /usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.unconverged.xml.gz is an unconverged VASP run. 2866s Electronic convergence reached: False. 2866s Ionic convergence reached: True. 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_runtype 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:159: UnconvergedVASPWarning: 2866s 2866s /usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.hse06.xml.gz is an unconverged VASP run. 2866s Electronic convergence reached: False. 2866s Ionic convergence reached: True. 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_runtype 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:165: UnconvergedVASPWarning: 2866s 2866s /usr/share/doc/pymatgen-test-files/examples/files/io/vasp/outputs/vasprun.dfpt.ionic.xml.gz is an unconverged VASP run. 2866s Electronic convergence reached: True. 2866s Ionic convergence reached: False. 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_standard 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:238: RuntimeWarning: 2866s 2866s invalid value encountered in divide 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_standard 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:243: RuntimeWarning: 2866s 2866s invalid value encountered in divide 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_standard 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:248: RuntimeWarning: 2866s 2866s invalid value encountered in divide 2866s 2866s tests/io/vasp/test_outputs.py::TestVasprun::test_standard 2866s /tmp/autopkgtest.mOfBxw/build.ALT/src/tests/io/vasp/test_outputs.py:256: RuntimeWarning: 2866s 2866s invalid value encountered in divide 2866s 2866s tests/io/vasp/test_outputs.py::TestWavecar::test_standard 2866s /usr/lib/python3/dist-packages/pymatgen/io/vasp/outputs.py:5008: RuntimeWarning: 2866s 2866s invalid value encountered in cast 2866s 2866s tests/phonon/test_plotter.py::TestPhononBSPlotter::test_proj_plot 2866s /usr/lib/python3/dist-packages/pymatgen/phonon/plotter.py:514: RuntimeWarning: 2866s 2866s More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`. 2866s 2866s tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap 2866s tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap 2866s tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap 2866s tests/util/test_plotting.py::TestFunc::test_plot_periodic_heatmap 2866s /usr/lib/python3/dist-packages/pymatgen/util/plotting.py:350: MatplotlibDeprecationWarning: 2866s 2866s Getting the array from a PolyQuadMesh will return the full array in the future (uncompressed). To get this behavior now set the PolyQuadMesh with a 2D array .set_array(data2d). 2866s 2866s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 2866s ============================= slowest 30 durations ============================= 2866s 69.67s call tests/transformations/test_advanced_transformations.py::TestCubicSupercellTransformation::test_apply_transformation_orthorhombic_supercell 2866s 52.79s call tests/electronic_structure/test_plotter.py::TestBSPlotterProjected::test_methods 2866s 37.10s call tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10 2866s 28.79s call tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation 2866s 26.01s call tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number 2866s 24.53s call tests/io/vasp/test_optics.py::TestVasprun::test_optics 2866s 23.95s call tests/core/test_surface.py::TestSlab::test_symmetrization 2866s 23.94s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_plot 2866s 22.74s call tests/core/test_surface.py::TestSlabGenerator::test_non_stoichiometric_symmetrized_slab 2866s 22.64s call tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress 2866s 22.37s call tests/io/vasp/test_outputs.py::TestVasprun::test_runtype 2866s 21.11s call tests/ext/test_optimade.py::TestOptimade::test_update_aliases 2866s 20.06s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen 2866s 19.90s call tests/io/test_packmol.py::TestPackmolSet::test_chdir_behavior 2866s 19.49s setup tests/io/lammps/test_data.py::TestCombinedData::test_as_lammpsdata 2866s 19.19s call tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter 2866s 18.97s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy 2866s 18.48s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp 2866s 18.11s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies 2866s 17.99s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict 2866s 17.68s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen 2866s 17.47s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi 2866s 17.39s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos 2866s 17.35s call tests/cli/test_pmg_structure.py::test_pmg_structure 2866s 16.89s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos 2866s 16.82s call tests/io/lobster/test_inputs.py::TestLobsterin::test_standard_with_energy_range_from_vasprun 2866s 15.94s call tests/cli/test_pmg_plot.py::test_plot_chgint 2866s 15.90s call tests/io/lobster/test_lobsterenv.py::TestLobsterNeighbors::test_get_info_cohps_to_neighbors 2866s 15.85s call tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack 2866s 14.79s call tests/io/vasp/test_outputs.py::TestVasprun::test_vasprun_soc 2866s =========================== short test summary info ============================ 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:27: No boltztrap2 2866s SKIPPED [1] tests/ext/test_matproj.py:44: MP API is down 2866s SKIPPED [1] tests/io/test_openff.py:25: could not import 'openff.toolkit': No module named 'openff' 2866s SKIPPED [1] tests/io/test_shengbte.py:10: could not import 'f90nml': No module named 'f90nml' 2866s SKIPPED [1] tests/io/test_zeopp.py:20: zeo not installed 2866s SKIPPED [1] tests/performance/test_import_time.py:32: ref time only comparable in CI runner 2866s SKIPPED [1] tests/symmetry/test_kpath_hin.py:11: seekpath not installed 2866s SKIPPED [1] tests/analysis/chemenv/coordination_environments/test_coordination_geometry_finder.py:174: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/chemenv/coordination_environments/test_coordination_geometry_finder.py:169: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/magnetism/test_analyzer.py:264: enumlib not present 2866s SKIPPED [1] tests/analysis/magnetism/test_analyzer.py:300: enumlib not present 2866s SKIPPED [1] tests/analysis/test_graphs.py:351: graphviz executables not present 2866s SKIPPED [1] tests/analysis/test_graphs.py:243: Need someone to fix this, see issue 4206 2866s SKIPPED [1] tests/analysis/test_local_env.py:1367: critic2 executable not present 2866s SKIPPED [1] tests/analysis/test_molecule_structure_comparator.py:144: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/test_reaction_calculator.py:334: hash test requires 64 bits 2866s SKIPPED [1] tests/analysis/test_surface_analysis.py:263: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/test_surface_analysis.py:270: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/test_surface_analysis.py:278: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/test_surface_analysis.py:256: TODO: need someone to fix this 2866s SKIPPED [1] tests/analysis/test_surface_analysis.py:286: TODO: need someone to fix this 2866s SKIPPED [1] tests/command_line/test_bader_caller.py:119: bader executable not present 2866s SKIPPED [1] tests/command_line/test_bader_caller.py:84: bader executable not present 2866s SKIPPED [1] tests/command_line/test_bader_caller.py:66: bader executable not present 2866s SKIPPED [1] tests/command_line/test_bader_caller.py:136: bader executable not present 2866s SKIPPED [1] tests/command_line/test_critic2_caller.py:26: critic2 executable not present 2866s SKIPPED [1] tests/command_line/test_critic2_caller.py:62: critic2 executable not present 2866s SKIPPED [1] tests/command_line/test_enumlib_caller.py:93: enum_lib not present. 2866s SKIPPED [1] tests/command_line/test_enumlib_caller.py:81: enum_lib not present. 2866s SKIPPED [1] tests/command_line/test_enumlib_caller.py:123: enum_lib not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:41: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:74: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:181: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:148: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:236: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:272: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:114: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:139: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:144: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:135: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:120: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:130: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:126: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:283: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:212: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:320: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:332: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:315: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:356: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:345: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:352: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:363: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:359: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:383: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:373: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:379: gulp not present. 2866s SKIPPED [1] tests/command_line/test_gulp_caller.py:386: gulp not present. 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:67: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:101: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:28: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:51: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:59: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:77: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_mcsqs_caller.py:89: mcsqs executable not present 2866s SKIPPED [1] tests/command_line/test_vampire_caller.py:34: vampire executable not present 2866s SKIPPED [1] tests/core/test_structure.py:714: Only run this in CI tests 2866s SKIPPED [1] tests/core/test_structure.py:107: enumlib or mcsqs executable not present 2866s SKIPPED [1] tests/core/test_structure.py:988: could not import 'moyopy': No module named 'moyopy' 2866s SKIPPED [1] tests/core/test_structure.py:1931: chgnet is not built against NumPy 2.0 2866s SKIPPED [1] tests/core/test_structure.py:2003: TODO: #3958 wait for matgl resolve of torch dependency 2866s SKIPPED [1] tests/core/test_structure.py:1021: PMG_MAPI_KEY environment variable not set or MP API is down. This is also the case in a PR. 2866s SKIPPED [1] tests/core/test_structure.py:1906: chgnet is not built against NumPy 2.0 2866s SKIPPED [1] tests/core/test_structure.py:2015: TODO: #3958 wait for matgl resolve of torch dependency 2866s SKIPPED [1] tests/core/test_structure.py:2026: TODO: #3958 wait for matgl resolve of torch dependency 2866s SKIPPED [1] tests/core/test_structure.py:2035: TODO: #3958 wait for matgl resolve of torch dependency 2866s SKIPPED [1] tests/core/test_structure.py:2668: could not import 'tblite': No module named 'tblite' 2866s SKIPPED [1] tests/core/test_structure.py:2676: Pytorch and TBLite clash. https://github.com/materialsproject/pymatgen/pull/3060 2866s SKIPPED [1] tests/core/test_surface.py:700: This test relies on neighbor orders and is hard coded. Disable temporarily 2866s SKIPPED [1] tests/core/test_xcfunc.py:56: TODO: 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:254: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:221: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:241: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:169: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:199: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:232: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:101: No FDINT 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:123: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:203: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:132: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:116: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:86: No FDINT 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:207: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:141: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:157: No x_trans. 2866s SKIPPED [1] tests/electronic_structure/test_boltztrap.py:43: No x_trans. 2866s SKIPPED [19] tests/electronic_structure/test_plotter.py: No x_trans executable found 2866s SKIPPED [1] tests/io/exciting/test_inputs.py:137: inconsistent data 2866s SKIPPED [1] tests/io/test_cif.py:322: non-free PF*.cif test files are not available 2866s SKIPPED [1] tests/io/test_jarvis.py:12: JARVIS-tools not loaded. 2866s SKIPPED [1] tests/io/test_jarvis.py:20: JARVIS-tools not loaded. 2866s SKIPPED [1] tests/io/vasp/test_inputs.py:1717: TODO: need someone to fix this 2866s SKIPPED [1] tests/symmetry/test_kpaths.py:21: No seek path present. 2866s SKIPPED [1] tests/test_pkg.py:11: SRC_TXT_PATH='src/pymatgen.egg-info/SOURCES.txt' not found. Run `pip install .` to create 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:97: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:158: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:188: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:207: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:237: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:249: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:364: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:304: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:342: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:334: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:352: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:492: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:540: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:549: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:607: mcsqs not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:617: mcsqs not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:638: mcsqs not present. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:670: icet not installed. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:656: icet not installed. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:681: icet not installed. 2866s SKIPPED [1] tests/transformations/test_advanced_transformations.py:874: hiphive not present 2866s SKIPPED [1] tests/transformations/test_site_transformations.py:214: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_standard_transformations.py:238: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_standard_transformations.py:255: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_standard_transformations.py:273: enum_lib not present. 2866s SKIPPED [1] tests/transformations/test_standard_transformations.py:279: enum_lib not present. 2866s = 2683 passed, 147 skipped, 294 deselected, 302709 warnings in 1742.85s (0:29:02) = 2866s ..tot conformations = 3 2866s ..tot confs tested = 3 2866s ..below energy threshold = 3 2872s autopkgtest [16:21:37]: test test-pymatgen: -----------------------] 2876s test-pymatgen PASS 2876s autopkgtest [16:21:41]: test test-pymatgen: - - - - - - - - - - results - - - - - - - - - - 2880s autopkgtest [16:21:45]: test test-pymatgen-net: preparing testbed 2904s autopkgtest [16:22:09]: testbed dpkg architecture: armhf 2906s autopkgtest [16:22:11]: testbed apt version: 2.9.33 2910s autopkgtest [16:22:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 2911s autopkgtest [16:22:16]: testbed release detected to be: plucky 2919s autopkgtest [16:22:24]: updating testbed package index (apt update) 2921s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 2921s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 2922s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 2922s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 2922s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 2922s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 2922s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 2923s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 2923s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 2923s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 2923s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 2923s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 2923s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 2923s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 2923s Get:15 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 2923s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 2946s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 2948s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 2950s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 2950s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 2950s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 2966s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 2968s Fetched 41.0 MB in 47s (871 kB/s) 2969s Reading package lists... 2975s autopkgtest [16:23:20]: upgrading testbed (apt dist-upgrade and autopurge) 2977s Reading package lists... 2977s Building dependency tree... 2977s Reading state information... 2978s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 2978s Starting 2 pkgProblemResolver with broken count: 0 2978s Done 2978s Entering ResolveByKeep 2979s 2979s Calculating upgrade... 2979s The following packages will be upgraded: 2979s libc-bin libc6 locales pinentry-curses python3-jinja2 sos strace 2980s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2980s Need to get 8683 kB of archives. 2980s After this operation, 23.6 kB of additional disk space will be used. 2980s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 2983s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 2983s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 2988s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 2989s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 2989s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 2989s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 2990s Preconfiguring packages ... 2990s Fetched 8683 kB in 10s (863 kB/s) 2990s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 2990s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 2991s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 2991s Setting up libc6:armhf (2.41-1ubuntu2) ... 2991s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 2991s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 2991s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 2991s Setting up libc-bin (2.41-1ubuntu2) ... 2992s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 2992s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 2992s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 2992s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 2992s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 2992s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 2992s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 2992s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 2992s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 2992s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 2992s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 2993s Setting up sos (4.9.0-5) ... 2993s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 2993s Setting up locales (2.41-1ubuntu2) ... 2994s Generating locales (this might take a while)... 2997s en_US.UTF-8... done 2997s Generation complete. 2997s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 2997s Setting up strace (6.13+ds-1ubuntu1) ... 2997s Processing triggers for man-db (2.13.0-1) ... 2999s Processing triggers for systemd (257.3-1ubuntu3) ... 3001s Reading package lists... 3001s Building dependency tree... 3001s Reading state information... 3002s Starting pkgProblemResolver with broken count: 0 3002s Starting 2 pkgProblemResolver with broken count: 0 3002s Done 3002s Solving dependencies... 3003s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3005s autopkgtest [16:23:50]: rebooting testbed after setup commands that affected boot 3076s Reading package lists... 3076s Building dependency tree... 3076s Reading state information... 3076s Starting pkgProblemResolver with broken count: 0 3077s Starting 2 pkgProblemResolver with broken count: 0 3077s Done 3078s The following NEW packages will be installed: 3078s autoconf automake autopoint autotools-dev blt build-essential cpp cpp-14 3078s cpp-14-arm-linux-gnueabihf cpp-arm-linux-gnueabihf cython3 debhelper 3078s debugedit dh-autoreconf dh-python dh-strip-nondeterminism docutils-common 3078s dwz fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 3078s fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-lyx 3078s fonts-mathjax g++ g++-14 g++-14-arm-linux-gnueabihf g++-arm-linux-gnueabihf 3078s gcc gcc-14 gcc-14-arm-linux-gnueabihf gcc-arm-linux-gnueabihf gettext 3078s hwloc-nox intltool-debian libaec0 libarchive-zip-perl libasan8 libblas3 3078s libboost-iostreams1.83.0 libc-dev-bin libc6-dev libcairo2 libcc1-0 3078s libcrypt-dev libdebhelper-perl libdeflate0 libdouble-conversion3 libdw1t64 3078s libegl-mesa0 libegl1 libexpat1-dev libfile-stripnondeterminism-perl 3078s libfontconfig1 libfreetype6 libgbm1 libgcc-14-dev libgfortran5 libgl1 3078s libgl1-mesa-dri libgl2ps1.4 libgles2 libglew2.2 libglvnd0 libglx-mesa0 3078s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 libhdf5-hl-310 3078s libhwloc15 libice6 libimagequant0 libinchi1.07 libinput-bin libinput10 3078s libisl23 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery 3078s libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore libjson-perl 3078s libjsoncpp26 liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libllvm19 liblzf1 3078s libmaeparser1 libmd4c0 libmpc3 libmpich12 libmtdev1t64 libnetcdf22 libogg0 3078s libopenbabel7 libopengl0 libopenjp2-7 libpcre2-16-0 libpixman-1-0 libproj25 3078s libpython3-all-dev libpython3-dev libpython3.13 libpython3.13-dev 3078s libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5gui5t64 libqt5network5t64 3078s libqt5widgets5t64 libraqm0 libsharpyuv0 libslurm42t64 libsm6 3078s libstdc++-14-dev libsymspg2 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 3078s libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 libtool libubsan1 3078s libvtk9.3 libvtk9.3-qt libvulkan1 libwacom-common libwacom9 3078s libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 3078s libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 3078s libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 3078s libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 3078s libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxft2 3078s libxkbcommon-x11-0 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxxf86vm1 3078s linux-libc-dev m4 mesa-libgallium mpi-default-bin mpich packmol po-debconf 3078s proj-data pybuild-plugin-pyproject pymatgen-test-files 3078s python-matplotlib-data python-pymatgen-doc python3-alabaster python3-all 3078s python3-all-dev python3-annotated-types python3-ase python3-brotli 3078s python3-bs4 python3-bson python3-build python3-cftime python3-contourpy 3078s python3-cycler python3-decorator python3-defusedxml python3-dev 3078s python3-dnspython python3-docutils python3-email-validator 3078s python3-fastjsonschema python3-fonttools python3-frozendict python3-fs 3078s python3-h5py python3-h5py-serial python3-imagesize python3-iniconfig 3078s python3-installer python3-joblib python3-jupyter-core python3-kiwisolver 3078s python3-latexcodec python3-lxml python3-lz4 python3-matplotlib python3-monty 3078s python3-mpi4py python3-mpmath python3-nbformat python3-netcdf4 3078s python3-networkx python3-numpy python3-numpy-dev python3-openbabel 3078s python3-palettable python3-pandas python3-pandas-lib python3-phonopy 3078s python3-pil python3-pil.imagetk python3-platformdirs python3-plotly 3078s python3-pluggy python3-pybtex python3-pydantic python3-pydantic-core 3078s python3-pymatgen python3-pyproject-hooks python3-pytest python3-pytz 3078s python3-roman python3-ruamel.yaml python3-ruamel.yaml.clib python3-scipy 3078s python3-snowballstemmer python3-soupsieve python3-spglib python3-sphinx 3078s python3-sphinx-rtd-theme python3-sphinxcontrib.jquery python3-sympy 3078s python3-tabulate python3-tenacity python3-tk python3-toml python3-tqdm 3078s python3-traitlets python3-tz python3-ufolib2 python3-uncertainties 3078s python3-unicodedata2 python3-vtk9 python3-wheel python3.12-tk python3.13-dev 3078s python3.13-tk rpcsvc-proto sgml-base sphinx-common sphinx-rtd-theme-common 3078s tk8.6-blt2.5 unicode-data x11-common xml-core zlib1g-dev 3078s 0 upgraded, 279 newly installed, 0 to remove and 0 not upgraded. 3078s Need to get 493 MB of archives. 3078s After this operation, 1734 MB of additional disk space will be used. 3078s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-lato all 2.015-1 [2781 kB] 3081s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy-dev armhf 1:2.2.3+ds-5 [141 kB] 3082s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 3082s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 3082s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 3084s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf python3-numpy armhf 1:2.2.3+ds-5 [3725 kB] 3088s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf sgml-base all 1.31 [11.4 kB] 3089s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf m4 armhf 1.4.19-7 [238 kB] 3089s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf autoconf all 2.72-3ubuntu1 [383 kB] 3089s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf autotools-dev all 20220109.1 [44.9 kB] 3089s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf automake all 1:1.17-3ubuntu1 [572 kB] 3090s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf autopoint all 0.23.1-1 [619 kB] 3091s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 3091s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 3092s Get:15 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 3092s Get:16 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 3093s Get:17 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 3093s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 3093s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 3093s Get:20 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 3093s Get:21 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 3093s Get:22 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 3093s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 3094s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-8 [527 kB] 3095s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf blt armhf 2.5.3+dfsg-8 [4824 B] 3095s Get:26 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-dev-bin armhf 2.41-1ubuntu2 [23.0 kB] 3095s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf linux-libc-dev armhf 6.14.0-10.10 [1683 kB] 3096s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libcrypt-dev armhf 1:4.4.38-1 [120 kB] 3097s Get:29 http://ftpmaster.internal/ubuntu plucky/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 3097s Get:30 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6-dev armhf 2.41-1ubuntu2 [1396 kB] 3098s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libisl23 armhf 0.27-1 [546 kB] 3099s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libmpc3 armhf 1.3.1-1build2 [47.1 kB] 3099s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [9220 kB] 3109s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-14 armhf 14.2.0-17ubuntu3 [1030 B] 3109s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [5578 B] 3109s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf cpp armhf 4:14.2.0-1ubuntu1 [22.4 kB] 3109s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf libcc1-0 armhf 15-20250222-0ubuntu1 [38.9 kB] 3109s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 3110s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libasan8 armhf 15-20250222-0ubuntu1 [2955 kB] 3113s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf libubsan1 armhf 15-20250222-0ubuntu1 [1191 kB] 3114s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf libgcc-14-dev armhf 14.2.0-17ubuntu3 [897 kB] 3115s Get:42 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [18.0 MB] 3135s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-14 armhf 14.2.0-17ubuntu3 [506 kB] 3135s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [1218 B] 3135s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf gcc armhf 4:14.2.0-1ubuntu1 [5004 B] 3135s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libstdc++-14-dev armhf 14.2.0-17ubuntu3 [2573 kB] 3138s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-17ubuntu3 [10.5 MB] 3150s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf g++-14 armhf 14.2.0-17ubuntu3 [21.8 kB] 3150s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1ubuntu1 [966 B] 3150s Get:50 http://ftpmaster.internal/ubuntu plucky/main armhf g++ armhf 4:14.2.0-1ubuntu1 [1084 B] 3150s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 3150s Get:52 http://ftpmaster.internal/ubuntu plucky/universe armhf cython3 armhf 3.0.11+dfsg-2ubuntu2 [2469 kB] 3152s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libdebhelper-perl all 13.24.1ubuntu2 [95.4 kB] 3152s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libtool all 2.5.4-4 [168 kB] 3153s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf dh-autoreconf all 20 [16.1 kB] 3153s Get:56 http://ftpmaster.internal/ubuntu plucky/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 3153s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [20.3 kB] 3153s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf dh-strip-nondeterminism all 1.14.1-2 [5064 B] 3153s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libdw1t64 armhf 0.192-4 [243 kB] 3153s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf debugedit armhf 1:5.1-2 [46.7 kB] 3153s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf dwz armhf 0.15-1build6 [116 kB] 3153s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf gettext armhf 0.23.1-1 [1053 kB] 3154s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 3154s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 3154s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf debhelper all 13.24.1ubuntu2 [895 kB] 3155s Get:66 http://ftpmaster.internal/ubuntu plucky/universe armhf dh-python all 6.20250308 [118 kB] 3156s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf xml-core all 0.19 [20.3 kB] 3156s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf docutils-common all 0.21.2+dfsg-2 [131 kB] 3156s Get:69 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 3156s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 3157s Get:71 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 3157s Get:72 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-lyx all 2.4.3-1 [171 kB] 3157s Get:73 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 3159s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 3159s Get:75 http://ftpmaster.internal/ubuntu plucky/main armhf libboost-iostreams1.83.0 armhf 1.83.0-4.1ubuntu2 [258 kB] 3160s Get:76 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 3160s Get:77 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 3160s Get:78 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 3160s Get:79 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 3160s Get:80 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 3160s Get:81 http://ftpmaster.internal/ubuntu plucky/universe armhf libdouble-conversion3 armhf 3.3.1-1 [39.1 kB] 3160s Get:82 http://ftpmaster.internal/ubuntu plucky/main armhf libwayland-server0 armhf 1.23.1-3 [30.3 kB] 3160s Get:83 http://ftpmaster.internal/ubuntu plucky/main armhf libllvm19 armhf 1:19.1.7-1ubuntu2 [27.8 MB] 3190s Get:84 http://ftpmaster.internal/ubuntu plucky/main armhf libx11-xcb1 armhf 2:1.8.10-2 [7902 B] 3190s Get:85 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-dri3-0 armhf 1.17.0-2 [7120 B] 3190s Get:86 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-present0 armhf 1.17.0-2 [5940 B] 3190s Get:87 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-randr0 armhf 1.17.0-2 [17.0 kB] 3190s Get:88 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-sync1 armhf 1.17.0-2 [8732 B] 3190s Get:89 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xfixes0 armhf 1.17.0-2 [10.0 kB] 3190s Get:90 http://ftpmaster.internal/ubuntu plucky/main armhf libxshmfence1 armhf 1.3-1build5 [4464 B] 3190s Get:91 http://ftpmaster.internal/ubuntu plucky/main armhf mesa-libgallium armhf 25.0.1-2ubuntu1 [8255 kB] 3199s Get:92 http://ftpmaster.internal/ubuntu plucky/main armhf libgbm1 armhf 25.0.1-2ubuntu1 [29.1 kB] 3199s Get:93 http://ftpmaster.internal/ubuntu plucky/main armhf libwayland-client0 armhf 1.23.1-3 [23.3 kB] 3199s Get:94 http://ftpmaster.internal/ubuntu plucky/main armhf libegl-mesa0 armhf 25.0.1-2ubuntu1 [100 kB] 3199s Get:95 http://ftpmaster.internal/ubuntu plucky/main armhf libexpat1-dev armhf 2.6.4-1 [121 kB] 3199s Get:96 http://ftpmaster.internal/ubuntu plucky/main armhf libvulkan1 armhf 1.4.304.0-1 [127 kB] 3199s Get:97 http://ftpmaster.internal/ubuntu plucky/main armhf libgl1-mesa-dri armhf 25.0.1-2ubuntu1 [31.9 kB] 3199s Get:98 http://ftpmaster.internal/ubuntu plucky/main armhf libglvnd0 armhf 1.7.0-1build1 [83.7 kB] 3199s Get:99 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-glx0 armhf 1.17.0-2 [22.6 kB] 3199s Get:100 http://ftpmaster.internal/ubuntu plucky/main armhf libxxf86vm1 armhf 1:1.1.4-1build4 [8068 B] 3199s Get:101 http://ftpmaster.internal/ubuntu plucky/main armhf libglx-mesa0 armhf 25.0.1-2ubuntu1 [120 kB] 3200s Get:102 http://ftpmaster.internal/ubuntu plucky/main armhf libglx0 armhf 1.7.0-1build1 [39.3 kB] 3200s Get:103 http://ftpmaster.internal/ubuntu plucky/main armhf libgl1 armhf 1.7.0-1build1 [105 kB] 3200s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf libgl2ps1.4 armhf 1.4.2+dfsg1-2build1 [37.7 kB] 3200s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf libglew2.2 armhf 2.2.0-4build1 [197 kB] 3200s Get:106 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 3200s Get:107 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 3201s Get:108 http://ftpmaster.internal/ubuntu plucky/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 3201s Get:109 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-310 armhf 1.14.5+repack-3 [1410 kB] 3202s Get:110 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3 [58.8 kB] 3202s Get:111 http://ftpmaster.internal/ubuntu plucky/universe armhf libhwloc15 armhf 2.12.0-1 [147 kB] 3202s Get:112 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 3202s Get:113 http://ftpmaster.internal/ubuntu plucky/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 3202s Get:114 http://ftpmaster.internal/ubuntu plucky/universe armhf libinchi1.07 armhf 1.07.3+dfsg-1 [491 kB] 3203s Get:115 http://ftpmaster.internal/ubuntu plucky/main armhf libwacom-common all 2.14.0-1 [103 kB] 3203s Get:116 http://ftpmaster.internal/ubuntu plucky/main armhf libwacom9 armhf 2.14.0-1 [23.6 kB] 3203s Get:117 http://ftpmaster.internal/ubuntu plucky/main armhf libinput-bin armhf 1.27.1-1 [25.9 kB] 3203s Get:118 http://ftpmaster.internal/ubuntu plucky/main armhf libmtdev1t64 armhf 1.1.7-1 [13.0 kB] 3203s Get:119 http://ftpmaster.internal/ubuntu plucky/main armhf libinput10 armhf 1.27.1-1 [124 kB] 3203s Get:120 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 3203s Get:121 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 3203s Get:122 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 3203s Get:123 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 3204s Get:124 http://ftpmaster.internal/ubuntu plucky/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 3204s Get:125 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 3204s Get:126 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-sphinxdoc all 8.1.3-4 [30.9 kB] 3204s Get:127 http://ftpmaster.internal/ubuntu plucky/main armhf libjson-perl all 4.10000-1 [81.9 kB] 3204s Get:128 http://ftpmaster.internal/ubuntu plucky/main armhf libjsoncpp26 armhf 1.9.6-3 [75.5 kB] 3204s Get:129 http://ftpmaster.internal/ubuntu plucky/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 3204s Get:130 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 3204s Get:131 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 3205s Get:132 http://ftpmaster.internal/ubuntu plucky/universe armhf liblzf1 armhf 3.6-4 [6554 B] 3205s Get:133 http://ftpmaster.internal/ubuntu plucky/universe armhf libmaeparser1 armhf 1.3.1-1build1 [89.3 kB] 3205s Get:134 http://ftpmaster.internal/ubuntu plucky/universe armhf libmd4c0 armhf 0.5.2-2 [38.2 kB] 3205s Get:135 http://ftpmaster.internal/ubuntu plucky/universe armhf libnetcdf22 armhf 1:4.9.3-1 [459 kB] 3205s Get:136 http://ftpmaster.internal/ubuntu plucky/main armhf libogg0 armhf 1.3.5-3build1 [20.5 kB] 3205s Get:137 http://ftpmaster.internal/ubuntu plucky/universe armhf libopenbabel7 armhf 3.1.1+dfsg-11ubuntu3 [3241 kB] 3209s Get:138 http://ftpmaster.internal/ubuntu plucky/main armhf libpcre2-16-0 armhf 10.45-1 [207 kB] 3209s Get:139 http://ftpmaster.internal/ubuntu plucky/universe armhf proj-data all 9.5.1-1 [7924 kB] 3217s Get:140 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 3217s Get:141 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 3217s Get:142 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 3218s Get:143 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 3218s Get:144 http://ftpmaster.internal/ubuntu plucky/universe armhf libproj25 armhf 9.5.1-1 [1331 kB] 3219s Get:145 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.2-2 [2079 kB] 3222s Get:146 http://ftpmaster.internal/ubuntu plucky/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1ubuntu1 [880 kB] 3222s Get:147 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13-dev armhf 3.13.2-2 [4265 kB] 3227s Get:148 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-dev armhf 3.13.2-2 [10.7 kB] 3227s Get:149 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3-all-dev armhf 3.13.2-2 [910 B] 3227s Get:150 http://ftpmaster.internal/ubuntu plucky/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 3227s Get:151 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5core5t64 armhf 5.15.15+dfsg-4ubuntu1 [1768 kB] 3229s Get:152 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5dbus5t64 armhf 5.15.15+dfsg-4ubuntu1 [198 kB] 3230s Get:153 http://ftpmaster.internal/ubuntu plucky/main armhf libegl1 armhf 1.7.0-1build1 [29.8 kB] 3230s Get:154 http://ftpmaster.internal/ubuntu plucky/main armhf libgles2 armhf 1.7.0-1build1 [18.0 kB] 3230s Get:155 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5network5t64 armhf 5.15.15+dfsg-4ubuntu1 [653 kB] 3230s Get:156 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 3230s Get:157 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-icccm4 armhf 0.4.2-1 [9840 B] 3230s Get:158 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-util1 armhf 0.4.1-1 [9468 B] 3230s Get:159 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-image0 armhf 0.4.0-2build1 [9680 B] 3230s Get:160 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-keysyms1 armhf 0.4.1-1 [8076 B] 3230s Get:161 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render-util0 armhf 0.3.10-1 [9444 B] 3230s Get:162 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shape0 armhf 1.17.0-2 [6030 B] 3230s Get:163 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xinerama0 armhf 1.17.0-2 [5212 B] 3230s Get:164 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xinput0 armhf 1.17.0-2 [29.5 kB] 3230s Get:165 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-xkb1 armhf 1.17.0-2 [28.8 kB] 3231s Get:166 http://ftpmaster.internal/ubuntu plucky/main armhf libxkbcommon-x11-0 armhf 1.7.0-2 [13.6 kB] 3231s Get:167 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5gui5t64 armhf 5.15.15+dfsg-4ubuntu1 [2968 kB] 3234s Get:168 http://ftpmaster.internal/ubuntu plucky/universe armhf libqt5widgets5t64 armhf 5.15.15+dfsg-4ubuntu1 [2261 kB] 3236s Get:169 http://ftpmaster.internal/ubuntu plucky/main armhf libraqm0 armhf 0.10.2-1 [12.4 kB] 3236s Get:170 http://ftpmaster.internal/ubuntu plucky/universe armhf libslurm42t64 armhf 24.11.1-1 [769 kB] 3237s Get:171 http://ftpmaster.internal/ubuntu plucky/universe armhf libsymspg2 armhf 2.5.0-2build1 [195 kB] 3238s Get:172 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbbbind-2-5 armhf 2022.0.0-2 [13.8 kB] 3238s Get:173 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbbmalloc2 armhf 2022.0.0-2 [47.0 kB] 3238s Get:174 http://ftpmaster.internal/ubuntu plucky/universe armhf libtbb12 armhf 2022.0.0-2 [80.8 kB] 3238s Get:175 http://ftpmaster.internal/ubuntu plucky/main armhf libtheoradec1 armhf 1.2.0~alpha1+dfsg-5 [45.7 kB] 3238s Get:176 http://ftpmaster.internal/ubuntu plucky/main armhf libtheoraenc1 armhf 1.2.0~alpha1+dfsg-5 [89.3 kB] 3238s Get:177 http://ftpmaster.internal/ubuntu plucky/universe armhf libmpich12 armhf 4.2.1-5 [1574 kB] 3240s Get:178 http://ftpmaster.internal/ubuntu plucky/main armhf libopengl0 armhf 1.7.0-1build1 [36.2 kB] 3240s Get:179 http://ftpmaster.internal/ubuntu plucky/universe armhf libvtk9.3 armhf 9.3.0+dfsg1-4ubuntu1 [21.9 MB] 3265s Get:180 http://ftpmaster.internal/ubuntu plucky/universe armhf libvtk9.3-qt armhf 9.3.0+dfsg1-4ubuntu1 [161 kB] 3265s Get:181 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpdemux2 armhf 1.5.0-0.1 [11.5 kB] 3265s Get:182 http://ftpmaster.internal/ubuntu plucky/main armhf libwebpmux3 armhf 1.5.0-0.1 [22.4 kB] 3265s Get:183 http://ftpmaster.internal/ubuntu plucky/main armhf libxslt1.1 armhf 1.1.39-0exp1ubuntu2 [152 kB] 3265s Get:184 http://ftpmaster.internal/ubuntu plucky/universe armhf packmol armhf 1:20.15.3-1 [123 kB] 3265s Get:185 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 3265s Get:186 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-toml all 0.10.2-1 [16.5 kB] 3265s Get:187 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-wheel all 0.45.1-1 [57.7 kB] 3266s Get:188 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-build all 1.2.2-1 [31.0 kB] 3266s Get:189 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 3266s Get:190 http://ftpmaster.internal/ubuntu plucky/universe armhf pybuild-plugin-pyproject all 6.20250308 [1726 B] 3266s Get:191 http://ftpmaster.internal/ubuntu plucky/universe armhf pymatgen-test-files all 2025.2.18-1 [214 MB] 3509s Get:192 http://ftpmaster.internal/ubuntu plucky/universe armhf python-matplotlib-data all 3.8.3-7build1 [2934 kB] 3513s Get:193 http://ftpmaster.internal/ubuntu plucky/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 3519s Get:194 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1014 kB] 3520s Get:195 http://ftpmaster.internal/ubuntu plucky/universe armhf python-pymatgen-doc all 2025.2.18+dfsg1-4 [1186 kB] 3522s Get:196 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all armhf 3.13.2-2 [886 B] 3522s Get:197 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-dev armhf 3.13.2-2 [509 kB] 3522s Get:198 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dev armhf 3.13.2-2 [26.7 kB] 3522s Get:199 http://ftpmaster.internal/ubuntu plucky/main armhf python3-all-dev armhf 3.13.2-2 [912 B] 3522s Get:200 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-annotated-types all 0.7.0-1 [19.4 kB] 3522s Get:201 http://ftpmaster.internal/ubuntu plucky/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 3522s Get:202 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-scipy armhf 1.14.1-4ubuntu2 [16.7 MB] 3542s Get:203 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-spglib armhf 2.5.0-2build1 [30.1 kB] 3543s Get:204 http://ftpmaster.internal/ubuntu plucky/main armhf libopenjp2-7 armhf 2.5.3-2 [172 kB] 3543s Get:205 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pil armhf 11.1.0-5build1 [435 kB] 3543s Get:206 http://ftpmaster.internal/ubuntu plucky/main armhf python3.12-tk armhf 3.12.9-1 [113 kB] 3543s Get:207 http://ftpmaster.internal/ubuntu plucky/main armhf python3.13-tk armhf 3.13.2-2 [103 kB] 3543s Get:208 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tk armhf 3.13.1-1 [9770 B] 3543s Get:209 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pil.imagetk armhf 11.1.0-5build1 [9226 B] 3543s Get:210 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-contourpy armhf 1.3.1-1build1 [195 kB] 3544s Get:211 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cycler all 0.12.1-1 [9716 B] 3544s Get:212 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-brotli armhf 1.1.0-2build4 [322 kB] 3544s Get:213 http://ftpmaster.internal/ubuntu plucky/main armhf python3-platformdirs all 4.3.6-1 [16.8 kB] 3544s Get:214 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fs all 2.4.16-7 [90.8 kB] 3544s Get:215 http://ftpmaster.internal/ubuntu plucky/main armhf python3-lxml armhf 5.3.1-1build1 [1282 kB] 3545s Get:216 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-lz4 armhf 4.4.0+dfsg-1build1 [25.3 kB] 3545s Get:217 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpmath all 1.3.0-1 [425 kB] 3546s Get:218 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sympy all 1.13.3-5 [4229 kB] 3550s Get:219 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ufolib2 all 0.17.0+dfsg1-1 [33.5 kB] 3550s Get:220 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-unicodedata2 armhf 15.1.0+ds-1build3 [357 kB] 3551s Get:221 http://ftpmaster.internal/ubuntu plucky/universe armhf unicode-data all 15.1.0-1 [8878 kB] 3560s Get:222 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fonttools armhf 4.55.3-2build1 [1462 kB] 3562s Get:223 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-kiwisolver armhf 1.4.7-3build1 [57.7 kB] 3562s Get:224 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-matplotlib armhf 3.8.3-7build1 [17.3 MB] 3580s Get:225 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ase all 3.23.0-1ubuntu1 [1754 kB] 3581s Get:226 http://ftpmaster.internal/ubuntu plucky/main armhf python3-soupsieve all 2.6-1 [33.0 kB] 3581s Get:227 http://ftpmaster.internal/ubuntu plucky/main armhf python3-bs4 all 4.13.3-2 [136 kB] 3582s Get:228 http://ftpmaster.internal/ubuntu plucky/main armhf python3-bson all 4.10.1-5build1 [42.9 kB] 3582s Get:229 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-cftime armhf 1.6.4-2 [212 kB] 3582s Get:230 http://ftpmaster.internal/ubuntu plucky/main armhf python3-defusedxml all 0.7.1-3 [42.2 kB] 3582s Get:231 http://ftpmaster.internal/ubuntu plucky/main armhf python3-dnspython all 2.7.0-1ubuntu1 [167 kB] 3582s Get:232 http://ftpmaster.internal/ubuntu plucky/main armhf python3-roman all 5.0-1 [10.3 kB] 3582s Get:233 http://ftpmaster.internal/ubuntu plucky/main armhf python3-docutils all 0.21.2+dfsg-2 [409 kB] 3582s Get:234 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-email-validator all 2.2.0-1 [28.5 kB] 3582s Get:235 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-fastjsonschema all 2.21.1-1 [20.4 kB] 3582s Get:236 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-frozendict all 2.4.6-1 [13.2 kB] 3582s Get:237 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py-serial armhf 3.13.0-1 [1113 kB] 3584s Get:238 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-h5py all 3.13.0-1 [7978 B] 3584s Get:239 http://ftpmaster.internal/ubuntu plucky/main armhf python3-imagesize all 1.4.1-1 [6844 B] 3584s Get:240 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 3584s Get:241 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-joblib all 1.4.2-3 [205 kB] 3584s Get:242 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 3584s Get:243 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-jupyter-core all 5.7.2-5 [28.1 kB] 3584s Get:244 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-latexcodec all 3.0.0-1 [16.6 kB] 3584s Get:245 http://ftpmaster.internal/ubuntu plucky/main armhf python3-pytz all 2025.1-3 [162 kB] 3584s Get:246 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tz all 2025.1-3 [1866 B] 3584s Get:247 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas-lib armhf 2.2.3+dfsg-8build1 [4877 kB] 3589s Get:248 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pandas all 2.2.3+dfsg-8build1 [3112 kB] 3592s Get:249 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pydantic-core armhf 2.27.2-1build1 [1531 kB] 3594s Get:250 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pydantic armhf 2.10.6-1 [288 kB] 3594s Get:251 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-tqdm all 4.67.1-2 [92.5 kB] 3594s Get:252 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ruamel.yaml.clib armhf 0.2.12+ds-1build1 [130 kB] 3594s Get:253 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-ruamel.yaml all 0.18.10+ds-1 [127 kB] 3594s Get:254 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-monty all 2025.1.9-1 [40.1 kB] 3594s Get:255 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-nbformat all 5.9.1-1 [41.2 kB] 3594s Get:256 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-netcdf4 armhf 1.7.2-1build4 [601 kB] 3595s Get:257 http://ftpmaster.internal/ubuntu plucky/main armhf python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 3608s Get:258 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-openbabel armhf 3.1.1+dfsg-11ubuntu3 [588 kB] 3609s Get:259 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-palettable all 3.3.3-1 [81.3 kB] 3609s Get:260 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-phonopy armhf 2.35.0-1 [316 kB] 3609s Get:261 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tenacity all 9.0.0-0ubuntu1 [17.0 kB] 3609s Get:262 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-plotly all 5.20.0+dfsg-1 [2766 kB] 3612s Get:263 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 3612s Get:264 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pybtex all 0.24.0-4 [70.0 kB] 3612s Get:265 http://ftpmaster.internal/ubuntu plucky/main armhf python3-tabulate all 0.9.0-1 [45.3 kB] 3612s Get:266 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-uncertainties all 3.2.2-1 [51.4 kB] 3612s Get:267 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pymatgen armhf 2025.2.18+dfsg1-4 [2613 kB] 3615s Get:268 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-pytest all 8.3.5-1 [252 kB] 3615s Get:269 http://ftpmaster.internal/ubuntu plucky/main armhf python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 3616s Get:270 http://ftpmaster.internal/ubuntu plucky/main armhf sphinx-common all 8.1.3-4 [663 kB] 3616s Get:271 http://ftpmaster.internal/ubuntu plucky/main armhf python3-alabaster all 0.7.16-0.1 [18.5 kB] 3616s Get:272 http://ftpmaster.internal/ubuntu plucky/main armhf python3-sphinx all 8.1.3-4 [474 kB] 3617s Get:273 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinxcontrib.jquery all 4.1-5 [6678 B] 3617s Get:274 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [23.5 kB] 3617s Get:275 http://ftpmaster.internal/ubuntu plucky/universe armhf hwloc-nox armhf 2.12.0-1 [213 kB] 3617s Get:276 http://ftpmaster.internal/ubuntu plucky/universe armhf mpich armhf 4.2.1-5 [214 kB] 3617s Get:277 http://ftpmaster.internal/ubuntu plucky/universe armhf mpi-default-bin armhf 1.18 [2504 B] 3617s Get:278 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-mpi4py armhf 4.0.1-6ubuntu1 [1097 kB] 3619s Get:279 http://ftpmaster.internal/ubuntu plucky/universe armhf python3-vtk9 armhf 9.3.0+dfsg1-4ubuntu1 [7333 kB] 3629s Fetched 493 MB in 9min 10s (896 kB/s) 3629s Selecting previously unselected package fonts-lato. 3629s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 3629s Preparing to unpack .../000-fonts-lato_2.015-1_all.deb ... 3629s Unpacking fonts-lato (2.015-1) ... 3629s Selecting previously unselected package python3-numpy-dev:armhf. 3629s Preparing to unpack .../001-python3-numpy-dev_1%3a2.2.3+ds-5_armhf.deb ... 3629s Unpacking python3-numpy-dev:armhf (1:2.2.3+ds-5) ... 3629s Selecting previously unselected package libblas3:armhf. 3629s Preparing to unpack .../002-libblas3_3.12.1-2_armhf.deb ... 3629s Unpacking libblas3:armhf (3.12.1-2) ... 3629s Selecting previously unselected package libgfortran5:armhf. 3629s Preparing to unpack .../003-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 3629s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 3629s Selecting previously unselected package liblapack3:armhf. 3629s Preparing to unpack .../004-liblapack3_3.12.1-2_armhf.deb ... 3629s Unpacking liblapack3:armhf (3.12.1-2) ... 3629s Selecting previously unselected package python3-numpy. 3629s Preparing to unpack .../005-python3-numpy_1%3a2.2.3+ds-5_armhf.deb ... 3629s Unpacking python3-numpy (1:2.2.3+ds-5) ... 3629s Selecting previously unselected package sgml-base. 3629s Preparing to unpack .../006-sgml-base_1.31_all.deb ... 3629s Unpacking sgml-base (1.31) ... 3629s Selecting previously unselected package m4. 3629s Preparing to unpack .../007-m4_1.4.19-7_armhf.deb ... 3629s Unpacking m4 (1.4.19-7) ... 3629s Selecting previously unselected package autoconf. 3629s Preparing to unpack .../008-autoconf_2.72-3ubuntu1_all.deb ... 3629s Unpacking autoconf (2.72-3ubuntu1) ... 3629s Selecting previously unselected package autotools-dev. 3629s Preparing to unpack .../009-autotools-dev_20220109.1_all.deb ... 3629s Unpacking autotools-dev (20220109.1) ... 3629s Selecting previously unselected package automake. 3629s Preparing to unpack .../010-automake_1%3a1.17-3ubuntu1_all.deb ... 3629s Unpacking automake (1:1.17-3ubuntu1) ... 3629s Selecting previously unselected package autopoint. 3629s Preparing to unpack .../011-autopoint_0.23.1-1_all.deb ... 3629s Unpacking autopoint (0.23.1-1) ... 3630s Selecting previously unselected package libtcl8.6:armhf. 3630s Preparing to unpack .../012-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 3630s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 3630s Selecting previously unselected package libfreetype6:armhf. 3630s Preparing to unpack .../013-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 3630s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 3630s Selecting previously unselected package fonts-dejavu-mono. 3630s Preparing to unpack .../014-fonts-dejavu-mono_2.37-8_all.deb ... 3630s Unpacking fonts-dejavu-mono (2.37-8) ... 3630s Selecting previously unselected package fonts-dejavu-core. 3630s Preparing to unpack .../015-fonts-dejavu-core_2.37-8_all.deb ... 3630s Unpacking fonts-dejavu-core (2.37-8) ... 3630s Selecting previously unselected package fontconfig-config. 3630s Preparing to unpack .../016-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 3630s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 3630s Selecting previously unselected package libfontconfig1:armhf. 3630s Preparing to unpack .../017-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 3630s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 3630s Selecting previously unselected package libxrender1:armhf. 3630s Preparing to unpack .../018-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 3630s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 3630s Selecting previously unselected package libxft2:armhf. 3630s Preparing to unpack .../019-libxft2_2.3.6-1build1_armhf.deb ... 3630s Unpacking libxft2:armhf (2.3.6-1build1) ... 3630s Selecting previously unselected package x11-common. 3630s Preparing to unpack .../020-x11-common_1%3a7.7+23ubuntu3_all.deb ... 3630s Unpacking x11-common (1:7.7+23ubuntu3) ... 3630s Selecting previously unselected package libxss1:armhf. 3630s Preparing to unpack .../021-libxss1_1%3a1.2.3-1build3_armhf.deb ... 3630s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 3630s Selecting previously unselected package libtk8.6:armhf. 3630s Preparing to unpack .../022-libtk8.6_8.6.16-1_armhf.deb ... 3630s Unpacking libtk8.6:armhf (8.6.16-1) ... 3630s Selecting previously unselected package tk8.6-blt2.5. 3630s Preparing to unpack .../023-tk8.6-blt2.5_2.5.3+dfsg-8_armhf.deb ... 3630s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 3630s Selecting previously unselected package blt. 3630s Preparing to unpack .../024-blt_2.5.3+dfsg-8_armhf.deb ... 3630s Unpacking blt (2.5.3+dfsg-8) ... 3630s Selecting previously unselected package libc-dev-bin. 3630s Preparing to unpack .../025-libc-dev-bin_2.41-1ubuntu2_armhf.deb ... 3630s Unpacking libc-dev-bin (2.41-1ubuntu2) ... 3630s Selecting previously unselected package linux-libc-dev:armhf. 3630s Preparing to unpack .../026-linux-libc-dev_6.14.0-10.10_armhf.deb ... 3630s Unpacking linux-libc-dev:armhf (6.14.0-10.10) ... 3631s Selecting previously unselected package libcrypt-dev:armhf. 3631s Preparing to unpack .../027-libcrypt-dev_1%3a4.4.38-1_armhf.deb ... 3631s Unpacking libcrypt-dev:armhf (1:4.4.38-1) ... 3631s Selecting previously unselected package rpcsvc-proto. 3631s Preparing to unpack .../028-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 3631s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 3631s Selecting previously unselected package libc6-dev:armhf. 3631s Preparing to unpack .../029-libc6-dev_2.41-1ubuntu2_armhf.deb ... 3631s Unpacking libc6-dev:armhf (2.41-1ubuntu2) ... 3631s Selecting previously unselected package libisl23:armhf. 3631s Preparing to unpack .../030-libisl23_0.27-1_armhf.deb ... 3631s Unpacking libisl23:armhf (0.27-1) ... 3631s Selecting previously unselected package libmpc3:armhf. 3631s Preparing to unpack .../031-libmpc3_1.3.1-1build2_armhf.deb ... 3631s Unpacking libmpc3:armhf (1.3.1-1build2) ... 3631s Selecting previously unselected package cpp-14-arm-linux-gnueabihf. 3631s Preparing to unpack .../032-cpp-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 3631s Unpacking cpp-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 3631s Selecting previously unselected package cpp-14. 3631s Preparing to unpack .../033-cpp-14_14.2.0-17ubuntu3_armhf.deb ... 3631s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 3631s Selecting previously unselected package cpp-arm-linux-gnueabihf. 3631s Preparing to unpack .../034-cpp-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 3631s Unpacking cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3631s Selecting previously unselected package cpp. 3631s Preparing to unpack .../035-cpp_4%3a14.2.0-1ubuntu1_armhf.deb ... 3631s Unpacking cpp (4:14.2.0-1ubuntu1) ... 3631s Selecting previously unselected package libcc1-0:armhf. 3631s Preparing to unpack .../036-libcc1-0_15-20250222-0ubuntu1_armhf.deb ... 3631s Unpacking libcc1-0:armhf (15-20250222-0ubuntu1) ... 3631s Selecting previously unselected package libgomp1:armhf. 3631s Preparing to unpack .../037-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 3631s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 3631s Selecting previously unselected package libasan8:armhf. 3631s Preparing to unpack .../038-libasan8_15-20250222-0ubuntu1_armhf.deb ... 3631s Unpacking libasan8:armhf (15-20250222-0ubuntu1) ... 3631s Selecting previously unselected package libubsan1:armhf. 3631s Preparing to unpack .../039-libubsan1_15-20250222-0ubuntu1_armhf.deb ... 3631s Unpacking libubsan1:armhf (15-20250222-0ubuntu1) ... 3631s Selecting previously unselected package libgcc-14-dev:armhf. 3631s Preparing to unpack .../040-libgcc-14-dev_14.2.0-17ubuntu3_armhf.deb ... 3631s Unpacking libgcc-14-dev:armhf (14.2.0-17ubuntu3) ... 3631s Selecting previously unselected package gcc-14-arm-linux-gnueabihf. 3631s Preparing to unpack .../041-gcc-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 3631s Unpacking gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 3632s Selecting previously unselected package gcc-14. 3632s Preparing to unpack .../042-gcc-14_14.2.0-17ubuntu3_armhf.deb ... 3632s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 3632s Selecting previously unselected package gcc-arm-linux-gnueabihf. 3632s Preparing to unpack .../043-gcc-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 3632s Unpacking gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3632s Selecting previously unselected package gcc. 3632s Preparing to unpack .../044-gcc_4%3a14.2.0-1ubuntu1_armhf.deb ... 3632s Unpacking gcc (4:14.2.0-1ubuntu1) ... 3632s Selecting previously unselected package libstdc++-14-dev:armhf. 3632s Preparing to unpack .../045-libstdc++-14-dev_14.2.0-17ubuntu3_armhf.deb ... 3632s Unpacking libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 3632s Selecting previously unselected package g++-14-arm-linux-gnueabihf. 3632s Preparing to unpack .../046-g++-14-arm-linux-gnueabihf_14.2.0-17ubuntu3_armhf.deb ... 3632s Unpacking g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 3632s Selecting previously unselected package g++-14. 3632s Preparing to unpack .../047-g++-14_14.2.0-17ubuntu3_armhf.deb ... 3632s Unpacking g++-14 (14.2.0-17ubuntu3) ... 3632s Selecting previously unselected package g++-arm-linux-gnueabihf. 3632s Preparing to unpack .../048-g++-arm-linux-gnueabihf_4%3a14.2.0-1ubuntu1_armhf.deb ... 3632s Unpacking g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3633s Selecting previously unselected package g++. 3633s Preparing to unpack .../049-g++_4%3a14.2.0-1ubuntu1_armhf.deb ... 3633s Unpacking g++ (4:14.2.0-1ubuntu1) ... 3633s Selecting previously unselected package build-essential. 3633s Preparing to unpack .../050-build-essential_12.10ubuntu1_armhf.deb ... 3633s Unpacking build-essential (12.10ubuntu1) ... 3633s Selecting previously unselected package cython3. 3633s Preparing to unpack .../051-cython3_3.0.11+dfsg-2ubuntu2_armhf.deb ... 3633s Unpacking cython3 (3.0.11+dfsg-2ubuntu2) ... 3633s Selecting previously unselected package libdebhelper-perl. 3633s Preparing to unpack .../052-libdebhelper-perl_13.24.1ubuntu2_all.deb ... 3633s Unpacking libdebhelper-perl (13.24.1ubuntu2) ... 3633s Selecting previously unselected package libtool. 3633s Preparing to unpack .../053-libtool_2.5.4-4_all.deb ... 3633s Unpacking libtool (2.5.4-4) ... 3633s Selecting previously unselected package dh-autoreconf. 3633s Preparing to unpack .../054-dh-autoreconf_20_all.deb ... 3633s Unpacking dh-autoreconf (20) ... 3633s Selecting previously unselected package libarchive-zip-perl. 3633s Preparing to unpack .../055-libarchive-zip-perl_1.68-1_all.deb ... 3633s Unpacking libarchive-zip-perl (1.68-1) ... 3633s Selecting previously unselected package libfile-stripnondeterminism-perl. 3633s Preparing to unpack .../056-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 3633s Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... 3633s Selecting previously unselected package dh-strip-nondeterminism. 3633s Preparing to unpack .../057-dh-strip-nondeterminism_1.14.1-2_all.deb ... 3633s Unpacking dh-strip-nondeterminism (1.14.1-2) ... 3633s Selecting previously unselected package libdw1t64:armhf. 3633s Preparing to unpack .../058-libdw1t64_0.192-4_armhf.deb ... 3633s Unpacking libdw1t64:armhf (0.192-4) ... 3633s Selecting previously unselected package debugedit. 3633s Preparing to unpack .../059-debugedit_1%3a5.1-2_armhf.deb ... 3633s Unpacking debugedit (1:5.1-2) ... 3633s Selecting previously unselected package dwz. 3633s Preparing to unpack .../060-dwz_0.15-1build6_armhf.deb ... 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3634s Unpacking libxcb-render0:armhf (1.17.0-2) ... 3634s Selecting previously unselected package libxcb-shm0:armhf. 3634s Preparing to unpack .../077-libxcb-shm0_1.17.0-2_armhf.deb ... 3634s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 3634s Selecting previously unselected package libcairo2:armhf. 3634s Preparing to unpack .../078-libcairo2_1.18.2-2_armhf.deb ... 3634s Unpacking libcairo2:armhf (1.18.2-2) ... 3634s Selecting previously unselected package libdeflate0:armhf. 3634s Preparing to unpack .../079-libdeflate0_1.23-1_armhf.deb ... 3634s Unpacking libdeflate0:armhf (1.23-1) ... 3634s Selecting previously unselected package libdouble-conversion3:armhf. 3634s Preparing to unpack .../080-libdouble-conversion3_3.3.1-1_armhf.deb ... 3634s Unpacking libdouble-conversion3:armhf (3.3.1-1) ... 3634s Selecting previously unselected package libwayland-server0:armhf. 3634s Preparing to unpack .../081-libwayland-server0_1.23.1-3_armhf.deb ... 3634s Unpacking libwayland-server0:armhf 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unselected package libxcb-sync1:armhf. 3635s Preparing to unpack .../087-libxcb-sync1_1.17.0-2_armhf.deb ... 3635s Unpacking libxcb-sync1:armhf (1.17.0-2) ... 3635s Selecting previously unselected package libxcb-xfixes0:armhf. 3635s Preparing to unpack .../088-libxcb-xfixes0_1.17.0-2_armhf.deb ... 3635s Unpacking libxcb-xfixes0:armhf (1.17.0-2) ... 3635s Selecting previously unselected package libxshmfence1:armhf. 3635s Preparing to unpack .../089-libxshmfence1_1.3-1build5_armhf.deb ... 3635s Unpacking libxshmfence1:armhf (1.3-1build5) ... 3635s Selecting previously unselected package mesa-libgallium:armhf. 3635s Preparing to unpack .../090-mesa-libgallium_25.0.1-2ubuntu1_armhf.deb ... 3635s Unpacking mesa-libgallium:armhf (25.0.1-2ubuntu1) ... 3635s Selecting previously unselected package libgbm1:armhf. 3635s Preparing to unpack .../091-libgbm1_25.0.1-2ubuntu1_armhf.deb ... 3635s Unpacking libgbm1:armhf (25.0.1-2ubuntu1) ... 3635s Selecting previously unselected package libwayland-client0:armhf. 3635s Preparing to unpack .../092-libwayland-client0_1.23.1-3_armhf.deb ... 3635s Unpacking libwayland-client0:armhf (1.23.1-3) ... 3635s Selecting previously unselected package libegl-mesa0:armhf. 3635s Preparing to unpack .../093-libegl-mesa0_25.0.1-2ubuntu1_armhf.deb ... 3635s Unpacking libegl-mesa0:armhf (25.0.1-2ubuntu1) ... 3635s Selecting previously unselected package libexpat1-dev:armhf. 3636s Preparing to unpack .../094-libexpat1-dev_2.6.4-1_armhf.deb ... 3636s Unpacking libexpat1-dev:armhf (2.6.4-1) ... 3636s Selecting previously unselected package libvulkan1:armhf. 3636s Preparing to unpack .../095-libvulkan1_1.4.304.0-1_armhf.deb ... 3636s Unpacking libvulkan1:armhf (1.4.304.0-1) ... 3636s Selecting previously unselected package libgl1-mesa-dri:armhf. 3636s Preparing to unpack .../096-libgl1-mesa-dri_25.0.1-2ubuntu1_armhf.deb ... 3636s Unpacking libgl1-mesa-dri:armhf (25.0.1-2ubuntu1) ... 3636s Selecting previously unselected package libglvnd0:armhf. 3636s Preparing to unpack .../097-libglvnd0_1.7.0-1build1_armhf.deb ... 3636s Unpacking libglvnd0:armhf (1.7.0-1build1) ... 3636s Selecting previously unselected package libxcb-glx0:armhf. 3636s Preparing to unpack .../098-libxcb-glx0_1.17.0-2_armhf.deb ... 3636s Unpacking libxcb-glx0:armhf (1.17.0-2) ... 3636s Selecting previously unselected package libxxf86vm1:armhf. 3636s Preparing to unpack .../099-libxxf86vm1_1%3a1.1.4-1build4_armhf.deb ... 3636s Unpacking libxxf86vm1:armhf (1:1.1.4-1build4) ... 3636s Selecting previously unselected package libglx-mesa0:armhf. 3636s Preparing to unpack .../100-libglx-mesa0_25.0.1-2ubuntu1_armhf.deb ... 3636s Unpacking libglx-mesa0:armhf (25.0.1-2ubuntu1) ... 3636s Selecting previously unselected package libglx0:armhf. 3636s Preparing to unpack .../101-libglx0_1.7.0-1build1_armhf.deb ... 3636s Unpacking libglx0:armhf (1.7.0-1build1) ... 3636s Selecting previously unselected package libgl1:armhf. 3636s Preparing to unpack .../102-libgl1_1.7.0-1build1_armhf.deb ... 3636s Unpacking libgl1:armhf (1.7.0-1build1) ... 3636s Selecting previously unselected package libgl2ps1.4. 3636s Preparing to unpack .../103-libgl2ps1.4_1.4.2+dfsg1-2build1_armhf.deb ... 3636s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 3636s Selecting previously unselected package libglew2.2:armhf. 3636s Preparing to unpack .../104-libglew2.2_2.2.0-4build1_armhf.deb ... 3636s Unpacking libglew2.2:armhf (2.2.0-4build1) ... 3636s Selecting previously unselected package libgraphite2-3:armhf. 3636s Preparing to unpack .../105-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 3636s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 3636s Selecting previously unselected package libharfbuzz0b:armhf. 3636s Preparing to unpack .../106-libharfbuzz0b_10.2.0-1_armhf.deb ... 3636s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 3636s Selecting previously unselected package libsz2:armhf. 3636s Preparing to unpack .../107-libsz2_1.1.3-1_armhf.deb ... 3636s Unpacking libsz2:armhf (1.1.3-1) ... 3636s Selecting previously unselected package libhdf5-310:armhf. 3636s Preparing to unpack .../108-libhdf5-310_1.14.5+repack-3_armhf.deb ... 3636s Unpacking libhdf5-310:armhf (1.14.5+repack-3) ... 3636s Selecting previously unselected package libhdf5-hl-310:armhf. 3636s Preparing to unpack .../109-libhdf5-hl-310_1.14.5+repack-3_armhf.deb ... 3636s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-3) ... 3636s Selecting previously unselected package libhwloc15:armhf. 3636s Preparing to unpack .../110-libhwloc15_2.12.0-1_armhf.deb ... 3636s Unpacking libhwloc15:armhf (2.12.0-1) ... 3636s Selecting previously unselected package libice6:armhf. 3636s Preparing to unpack .../111-libice6_2%3a1.1.1-1_armhf.deb ... 3636s Unpacking libice6:armhf (2:1.1.1-1) ... 3636s Selecting previously unselected package libimagequant0:armhf. 3636s Preparing to unpack .../112-libimagequant0_2.18.0-1build1_armhf.deb ... 3636s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 3636s Selecting previously unselected package libinchi1.07. 3636s Preparing to unpack .../113-libinchi1.07_1.07.3+dfsg-1_armhf.deb ... 3636s Unpacking libinchi1.07 (1.07.3+dfsg-1) ... 3636s Selecting previously unselected package libwacom-common. 3636s Preparing to unpack .../114-libwacom-common_2.14.0-1_all.deb ... 3636s Unpacking libwacom-common (2.14.0-1) ... 3636s Selecting previously unselected package libwacom9:armhf. 3636s Preparing to unpack .../115-libwacom9_2.14.0-1_armhf.deb ... 3636s Unpacking libwacom9:armhf (2.14.0-1) ... 3636s Selecting previously unselected package libinput-bin. 3637s Preparing to unpack .../116-libinput-bin_1.27.1-1_armhf.deb ... 3637s Unpacking libinput-bin (1.27.1-1) ... 3637s Selecting previously unselected package libmtdev1t64:armhf. 3637s Preparing to unpack .../117-libmtdev1t64_1.1.7-1_armhf.deb ... 3637s Unpacking libmtdev1t64:armhf (1.1.7-1) ... 3637s Selecting previously unselected package libinput10:armhf. 3637s Preparing to unpack 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3637s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 3637s Selecting previously unselected package libjs-underscore. 3637s Preparing to unpack .../124-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 3637s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 3637s Selecting previously unselected package libjs-sphinxdoc. 3637s Preparing to unpack .../125-libjs-sphinxdoc_8.1.3-4_all.deb ... 3637s Unpacking libjs-sphinxdoc (8.1.3-4) ... 3637s Selecting previously unselected package libjson-perl. 3637s Preparing to unpack .../126-libjson-perl_4.10000-1_all.deb ... 3637s Unpacking libjson-perl (4.10000-1) ... 3637s Selecting previously unselected package libjsoncpp26:armhf. 3637s Preparing to unpack .../127-libjsoncpp26_1.9.6-3_armhf.deb ... 3637s Unpacking libjsoncpp26:armhf (1.9.6-3) ... 3637s Selecting previously unselected package liblbfgsb0:armhf. 3637s Preparing to unpack .../128-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 3637s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 3637s Selecting previously unselected package liblcms2-2:armhf. 3637s Preparing to unpack .../129-liblcms2-2_2.16-2_armhf.deb ... 3637s Unpacking liblcms2-2:armhf (2.16-2) ... 3637s Selecting previously unselected package liblerc4:armhf. 3637s Preparing to unpack .../130-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 3637s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 3637s Selecting previously unselected package liblzf1:armhf. 3637s Preparing to unpack .../131-liblzf1_3.6-4_armhf.deb ... 3637s Unpacking liblzf1:armhf (3.6-4) ... 3637s Selecting previously unselected package libmaeparser1:armhf. 3637s Preparing to unpack .../132-libmaeparser1_1.3.1-1build1_armhf.deb ... 3637s Unpacking libmaeparser1:armhf (1.3.1-1build1) ... 3637s Selecting previously unselected package libmd4c0:armhf. 3637s Preparing to unpack .../133-libmd4c0_0.5.2-2_armhf.deb ... 3637s Unpacking libmd4c0:armhf (0.5.2-2) ... 3637s Selecting previously unselected package libnetcdf22:armhf. 3637s Preparing to unpack .../134-libnetcdf22_1%3a4.9.3-1_armhf.deb ... 3637s Unpacking libnetcdf22:armhf (1:4.9.3-1) ... 3637s Selecting previously unselected package libogg0:armhf. 3637s Preparing to unpack .../135-libogg0_1.3.5-3build1_armhf.deb ... 3637s Unpacking libogg0:armhf (1.3.5-3build1) ... 3637s Selecting previously unselected package libopenbabel7. 3637s Preparing to unpack .../136-libopenbabel7_3.1.1+dfsg-11ubuntu3_armhf.deb ... 3637s Unpacking libopenbabel7 (3.1.1+dfsg-11ubuntu3) ... 3637s Selecting previously unselected package libpcre2-16-0:armhf. 3638s Preparing to unpack .../137-libpcre2-16-0_10.45-1_armhf.deb ... 3638s Unpacking libpcre2-16-0:armhf (10.45-1) ... 3638s Selecting previously unselected package proj-data. 3638s Preparing to unpack .../138-proj-data_9.5.1-1_all.deb ... 3638s Unpacking proj-data (9.5.1-1) ... 3638s Selecting previously unselected package libjbig0:armhf. 3638s Preparing to unpack .../139-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 3638s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 3638s Selecting previously unselected package libsharpyuv0:armhf. 3638s Preparing to unpack .../140-libsharpyuv0_1.5.0-0.1_armhf.deb ... 3638s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 3638s Selecting previously unselected package libwebp7:armhf. 3638s Preparing to unpack .../141-libwebp7_1.5.0-0.1_armhf.deb ... 3638s Unpacking libwebp7:armhf (1.5.0-0.1) ... 3638s Selecting previously unselected package libtiff6:armhf. 3638s Preparing to unpack .../142-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 3638s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 3638s Selecting previously unselected package libproj25:armhf. 3638s Preparing to unpack .../143-libproj25_9.5.1-1_armhf.deb ... 3638s Unpacking libproj25:armhf (9.5.1-1) ... 3638s Selecting previously unselected package libpython3.13:armhf. 3638s Preparing to unpack .../144-libpython3.13_3.13.2-2_armhf.deb ... 3638s Unpacking libpython3.13:armhf (3.13.2-2) ... 3638s Selecting previously unselected package zlib1g-dev:armhf. 3638s Preparing to unpack .../145-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_armhf.deb ... 3638s Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 3638s Selecting previously unselected package libpython3.13-dev:armhf. 3638s Preparing to unpack .../146-libpython3.13-dev_3.13.2-2_armhf.deb ... 3638s Unpacking libpython3.13-dev:armhf (3.13.2-2) ... 3638s Selecting previously unselected package libpython3-dev:armhf. 3638s Preparing to unpack .../147-libpython3-dev_3.13.2-2_armhf.deb ... 3638s Unpacking libpython3-dev:armhf (3.13.2-2) ... 3638s Selecting previously unselected package libpython3-all-dev:armhf. 3638s Preparing to unpack .../148-libpython3-all-dev_3.13.2-2_armhf.deb ... 3638s Unpacking libpython3-all-dev:armhf (3.13.2-2) ... 3638s Selecting previously unselected package libqhull-r8.0:armhf. 3638s Preparing to unpack .../149-libqhull-r8.0_2020.2-6build1_armhf.deb ... 3638s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 3638s Selecting previously unselected package libqt5core5t64:armhf. 3638s Preparing to unpack .../150-libqt5core5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 3638s Unpacking libqt5core5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3638s Selecting previously unselected package libqt5dbus5t64:armhf. 3638s Preparing to unpack .../151-libqt5dbus5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 3638s Unpacking libqt5dbus5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3638s Selecting previously unselected package libegl1:armhf. 3638s Preparing to unpack .../152-libegl1_1.7.0-1build1_armhf.deb ... 3638s Unpacking libegl1:armhf (1.7.0-1build1) ... 3638s Selecting previously unselected package libgles2:armhf. 3638s Preparing to unpack .../153-libgles2_1.7.0-1build1_armhf.deb ... 3638s Unpacking libgles2:armhf (1.7.0-1build1) ... 3638s Selecting previously unselected package libqt5network5t64:armhf. 3639s Preparing to unpack .../154-libqt5network5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 3639s Unpacking libqt5network5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3639s Selecting previously unselected package libsm6:armhf. 3639s Preparing to unpack .../155-libsm6_2%3a1.2.4-1_armhf.deb ... 3639s Unpacking libsm6:armhf (2:1.2.4-1) ... 3639s Selecting previously unselected package libxcb-icccm4:armhf. 3639s Preparing to unpack .../156-libxcb-icccm4_0.4.2-1_armhf.deb ... 3639s Unpacking libxcb-icccm4:armhf (0.4.2-1) ... 3639s Selecting previously unselected package libxcb-util1:armhf. 3639s Preparing to unpack .../157-libxcb-util1_0.4.1-1_armhf.deb ... 3639s Unpacking libxcb-util1:armhf (0.4.1-1) ... 3639s Selecting previously unselected package libxcb-image0:armhf. 3639s Preparing to unpack .../158-libxcb-image0_0.4.0-2build1_armhf.deb ... 3639s Unpacking libxcb-image0:armhf (0.4.0-2build1) ... 3639s Selecting previously unselected package libxcb-keysyms1:armhf. 3639s Preparing to unpack .../159-libxcb-keysyms1_0.4.1-1_armhf.deb ... 3639s Unpacking libxcb-keysyms1:armhf (0.4.1-1) ... 3639s Selecting previously unselected package libxcb-render-util0:armhf. 3639s Preparing to unpack .../160-libxcb-render-util0_0.3.10-1_armhf.deb ... 3639s Unpacking libxcb-render-util0:armhf (0.3.10-1) ... 3639s Selecting previously unselected package libxcb-shape0:armhf. 3639s Preparing to unpack .../161-libxcb-shape0_1.17.0-2_armhf.deb ... 3639s Unpacking libxcb-shape0:armhf (1.17.0-2) ... 3639s Selecting previously unselected package libxcb-xinerama0:armhf. 3639s Preparing to unpack .../162-libxcb-xinerama0_1.17.0-2_armhf.deb ... 3639s Unpacking libxcb-xinerama0:armhf (1.17.0-2) ... 3639s Selecting previously unselected package libxcb-xinput0:armhf. 3639s Preparing to unpack .../163-libxcb-xinput0_1.17.0-2_armhf.deb ... 3639s Unpacking libxcb-xinput0:armhf (1.17.0-2) ... 3639s Selecting previously unselected package libxcb-xkb1:armhf. 3639s Preparing to unpack .../164-libxcb-xkb1_1.17.0-2_armhf.deb ... 3639s Unpacking libxcb-xkb1:armhf (1.17.0-2) ... 3639s Selecting previously unselected package libxkbcommon-x11-0:armhf. 3639s Preparing to unpack .../165-libxkbcommon-x11-0_1.7.0-2_armhf.deb ... 3639s Unpacking libxkbcommon-x11-0:armhf (1.7.0-2) ... 3639s Selecting previously unselected package libqt5gui5t64:armhf. 3639s Preparing to unpack .../166-libqt5gui5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 3639s Unpacking libqt5gui5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3639s Selecting previously unselected package libqt5widgets5t64:armhf. 3639s Preparing to unpack .../167-libqt5widgets5t64_5.15.15+dfsg-4ubuntu1_armhf.deb ... 3639s Unpacking libqt5widgets5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3639s Selecting previously unselected package libraqm0:armhf. 3639s Preparing to unpack .../168-libraqm0_0.10.2-1_armhf.deb ... 3639s Unpacking libraqm0:armhf (0.10.2-1) ... 3639s Selecting previously unselected package libslurm42t64. 3639s Preparing to unpack .../169-libslurm42t64_24.11.1-1_armhf.deb ... 3639s Unpacking libslurm42t64 (24.11.1-1) ... 3639s Selecting previously unselected package libsymspg2:armhf. 3639s Preparing to unpack .../170-libsymspg2_2.5.0-2build1_armhf.deb ... 3639s Unpacking libsymspg2:armhf (2.5.0-2build1) ... 3639s Selecting previously unselected package libtbbbind-2-5:armhf. 3639s Preparing to unpack .../171-libtbbbind-2-5_2022.0.0-2_armhf.deb ... 3639s Unpacking libtbbbind-2-5:armhf (2022.0.0-2) ... 3639s Selecting previously unselected package libtbbmalloc2:armhf. 3639s Preparing to unpack .../172-libtbbmalloc2_2022.0.0-2_armhf.deb ... 3639s Unpacking libtbbmalloc2:armhf (2022.0.0-2) ... 3639s Selecting previously unselected package libtbb12:armhf. 3639s Preparing to unpack .../173-libtbb12_2022.0.0-2_armhf.deb ... 3639s Unpacking libtbb12:armhf (2022.0.0-2) ... 3639s Selecting previously unselected package libtheoradec1:armhf. 3639s Preparing to unpack .../174-libtheoradec1_1.2.0~alpha1+dfsg-5_armhf.deb ... 3639s Unpacking libtheoradec1:armhf (1.2.0~alpha1+dfsg-5) ... 3639s Selecting previously unselected package libtheoraenc1:armhf. 3639s Preparing to unpack .../175-libtheoraenc1_1.2.0~alpha1+dfsg-5_armhf.deb ... 3639s Unpacking libtheoraenc1:armhf (1.2.0~alpha1+dfsg-5) ... 3639s Selecting previously unselected package libmpich12:armhf. 3639s Preparing to unpack .../176-libmpich12_4.2.1-5_armhf.deb ... 3639s Unpacking libmpich12:armhf (4.2.1-5) ... 3639s Selecting previously unselected package libopengl0:armhf. 3640s Preparing to unpack .../177-libopengl0_1.7.0-1build1_armhf.deb ... 3640s Unpacking libopengl0:armhf (1.7.0-1build1) ... 3640s Selecting previously unselected package libvtk9.3:armhf. 3640s Preparing to unpack .../178-libvtk9.3_9.3.0+dfsg1-4ubuntu1_armhf.deb ... 3640s Unpacking libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu1) ... 3640s Selecting previously unselected package libvtk9.3-qt:armhf. 3640s Preparing to unpack .../179-libvtk9.3-qt_9.3.0+dfsg1-4ubuntu1_armhf.deb ... 3640s Unpacking libvtk9.3-qt:armhf (9.3.0+dfsg1-4ubuntu1) ... 3640s Selecting previously unselected package libwebpdemux2:armhf. 3640s Preparing to unpack .../180-libwebpdemux2_1.5.0-0.1_armhf.deb ... 3640s Unpacking libwebpdemux2:armhf (1.5.0-0.1) ... 3640s Selecting previously unselected package libwebpmux3:armhf. 3640s Preparing to unpack .../181-libwebpmux3_1.5.0-0.1_armhf.deb ... 3640s Unpacking libwebpmux3:armhf (1.5.0-0.1) ... 3640s Selecting previously unselected package libxslt1.1:armhf. 3640s Preparing to unpack .../182-libxslt1.1_1.1.39-0exp1ubuntu2_armhf.deb ... 3640s Unpacking libxslt1.1:armhf (1.1.39-0exp1ubuntu2) ... 3640s Selecting previously unselected package packmol. 3640s Preparing to unpack .../183-packmol_1%3a20.15.3-1_armhf.deb ... 3640s Unpacking packmol (1:20.15.3-1) ... 3640s Selecting previously unselected package python3-pyproject-hooks. 3640s Preparing to unpack .../184-python3-pyproject-hooks_1.2.0-1_all.deb ... 3640s Unpacking python3-pyproject-hooks (1.2.0-1) ... 3640s Selecting previously unselected package python3-toml. 3640s Preparing to unpack .../185-python3-toml_0.10.2-1_all.deb ... 3640s Unpacking python3-toml (0.10.2-1) ... 3641s Selecting previously unselected package python3-wheel. 3641s Preparing to unpack .../186-python3-wheel_0.45.1-1_all.deb ... 3641s Unpacking python3-wheel (0.45.1-1) ... 3641s Selecting previously unselected package python3-build. 3641s Preparing to unpack .../187-python3-build_1.2.2-1_all.deb ... 3641s Unpacking python3-build (1.2.2-1) ... 3641s Selecting previously unselected package python3-installer. 3641s Preparing to unpack .../188-python3-installer_0.7.0+dfsg1-3_all.deb ... 3641s Unpacking python3-installer (0.7.0+dfsg1-3) ... 3641s Selecting previously unselected package pybuild-plugin-pyproject. 3641s Preparing to unpack .../189-pybuild-plugin-pyproject_6.20250308_all.deb ... 3641s Unpacking pybuild-plugin-pyproject (6.20250308) ... 3641s Selecting previously unselected package pymatgen-test-files. 3641s Preparing to unpack .../190-pymatgen-test-files_2025.2.18-1_all.deb ... 3641s Unpacking pymatgen-test-files (2025.2.18-1) ... 3644s Selecting previously unselected package python-matplotlib-data. 3644s Preparing to unpack .../191-python-matplotlib-data_3.8.3-7build1_all.deb ... 3644s Unpacking python-matplotlib-data (3.8.3-7build1) ... 3644s Selecting previously unselected package libjs-mathjax. 3644s Preparing to unpack .../192-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 3644s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 3645s Selecting previously unselected package sphinx-rtd-theme-common. 3645s Preparing to unpack .../193-sphinx-rtd-theme-common_3.0.2+dfsg-2_all.deb ... 3645s Unpacking sphinx-rtd-theme-common (3.0.2+dfsg-2) ... 3645s Selecting previously unselected package python-pymatgen-doc. 3645s Preparing to unpack .../194-python-pymatgen-doc_2025.2.18+dfsg1-4_all.deb ... 3645s Unpacking python-pymatgen-doc (2025.2.18+dfsg1-4) ... 3645s Selecting previously unselected package python3-all. 3645s Preparing to unpack .../195-python3-all_3.13.2-2_armhf.deb ... 3645s Unpacking python3-all (3.13.2-2) ... 3645s Selecting previously unselected package python3.13-dev. 3645s Preparing to unpack .../196-python3.13-dev_3.13.2-2_armhf.deb ... 3645s Unpacking python3.13-dev (3.13.2-2) ... 3645s Selecting previously unselected package python3-dev. 3645s Preparing to unpack .../197-python3-dev_3.13.2-2_armhf.deb ... 3645s Unpacking python3-dev (3.13.2-2) ... 3645s Selecting previously unselected package python3-all-dev. 3645s Preparing to unpack .../198-python3-all-dev_3.13.2-2_armhf.deb ... 3645s Unpacking python3-all-dev (3.13.2-2) ... 3645s Selecting previously unselected package python3-annotated-types. 3645s Preparing to unpack .../199-python3-annotated-types_0.7.0-1_all.deb ... 3645s Unpacking python3-annotated-types (0.7.0-1) ... 3645s Selecting previously unselected package python3-decorator. 3645s Preparing to unpack .../200-python3-decorator_5.1.1-5_all.deb ... 3645s Unpacking python3-decorator (5.1.1-5) ... 3645s Selecting previously unselected package python3-scipy. 3645s Preparing to unpack .../201-python3-scipy_1.14.1-4ubuntu2_armhf.deb ... 3645s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 3646s Selecting previously unselected package python3-spglib. 3646s Preparing to unpack .../202-python3-spglib_2.5.0-2build1_armhf.deb ... 3646s Unpacking python3-spglib (2.5.0-2build1) ... 3646s Selecting previously unselected package libopenjp2-7:armhf. 3646s Preparing to unpack .../203-libopenjp2-7_2.5.3-2_armhf.deb ... 3646s Unpacking libopenjp2-7:armhf (2.5.3-2) ... 3646s Selecting previously unselected package python3-pil:armhf. 3646s Preparing to unpack .../204-python3-pil_11.1.0-5build1_armhf.deb ... 3646s Unpacking python3-pil:armhf (11.1.0-5build1) ... 3646s Selecting previously unselected package python3.12-tk. 3646s Preparing to unpack .../205-python3.12-tk_3.12.9-1_armhf.deb ... 3646s Unpacking python3.12-tk (3.12.9-1) ... 3646s Selecting previously unselected package python3.13-tk. 3646s Preparing to unpack .../206-python3.13-tk_3.13.2-2_armhf.deb ... 3646s Unpacking python3.13-tk (3.13.2-2) ... 3646s Selecting previously unselected package python3-tk:armhf. 3646s Preparing to unpack .../207-python3-tk_3.13.1-1_armhf.deb ... 3646s Unpacking python3-tk:armhf (3.13.1-1) ... 3646s Selecting previously unselected package python3-pil.imagetk:armhf. 3646s Preparing to unpack .../208-python3-pil.imagetk_11.1.0-5build1_armhf.deb ... 3646s Unpacking python3-pil.imagetk:armhf (11.1.0-5build1) ... 3646s Selecting previously unselected package python3-contourpy. 3646s Preparing to unpack .../209-python3-contourpy_1.3.1-1build1_armhf.deb ... 3646s Unpacking python3-contourpy (1.3.1-1build1) ... 3646s Selecting previously unselected package python3-cycler. 3646s Preparing to unpack .../210-python3-cycler_0.12.1-1_all.deb ... 3646s Unpacking python3-cycler (0.12.1-1) ... 3646s Selecting previously unselected package python3-brotli. 3646s Preparing to unpack .../211-python3-brotli_1.1.0-2build4_armhf.deb ... 3646s Unpacking python3-brotli (1.1.0-2build4) ... 3646s Selecting previously unselected package python3-platformdirs. 3646s Preparing to unpack .../212-python3-platformdirs_4.3.6-1_all.deb ... 3646s Unpacking python3-platformdirs (4.3.6-1) ... 3646s Selecting previously unselected package python3-fs. 3646s Preparing to unpack .../213-python3-fs_2.4.16-7_all.deb ... 3646s Unpacking python3-fs (2.4.16-7) ... 3646s Selecting previously unselected package python3-lxml:armhf. 3646s Preparing to unpack .../214-python3-lxml_5.3.1-1build1_armhf.deb ... 3646s Unpacking python3-lxml:armhf (5.3.1-1build1) ... 3646s Selecting previously unselected package python3-lz4. 3646s Preparing to unpack .../215-python3-lz4_4.4.0+dfsg-1build1_armhf.deb ... 3646s Unpacking python3-lz4 (4.4.0+dfsg-1build1) ... 3646s Selecting previously unselected package python3-mpmath. 3646s Preparing to unpack .../216-python3-mpmath_1.3.0-1_all.deb ... 3646s Unpacking python3-mpmath (1.3.0-1) ... 3646s Selecting previously unselected package python3-sympy. 3646s Preparing to unpack .../217-python3-sympy_1.13.3-5_all.deb ... 3646s Unpacking python3-sympy (1.13.3-5) ... 3647s Selecting previously unselected package python3-ufolib2. 3647s Preparing to unpack .../218-python3-ufolib2_0.17.0+dfsg1-1_all.deb ... 3647s Unpacking python3-ufolib2 (0.17.0+dfsg1-1) ... 3647s Selecting previously unselected package python3-unicodedata2. 3647s Preparing to unpack .../219-python3-unicodedata2_15.1.0+ds-1build3_armhf.deb ... 3647s Unpacking python3-unicodedata2 (15.1.0+ds-1build3) ... 3647s Selecting previously unselected package unicode-data. 3647s Preparing to unpack .../220-unicode-data_15.1.0-1_all.deb ... 3647s Unpacking unicode-data (15.1.0-1) ... 3647s Selecting previously unselected package python3-fonttools. 3647s Preparing to unpack .../221-python3-fonttools_4.55.3-2build1_armhf.deb ... 3647s Unpacking python3-fonttools (4.55.3-2build1) ... 3647s Selecting previously unselected package python3-kiwisolver. 3647s Preparing to unpack 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python3-bson (4.10.1-5build1) ... 3648s Selecting previously unselected package python3-cftime. 3648s Preparing to unpack .../228-python3-cftime_1.6.4-2_armhf.deb ... 3648s Unpacking python3-cftime (1.6.4-2) ... 3648s Selecting previously unselected package python3-defusedxml. 3648s Preparing to unpack .../229-python3-defusedxml_0.7.1-3_all.deb ... 3648s Unpacking python3-defusedxml (0.7.1-3) ... 3648s Selecting previously unselected package python3-dnspython. 3648s Preparing to unpack .../230-python3-dnspython_2.7.0-1ubuntu1_all.deb ... 3648s Unpacking python3-dnspython (2.7.0-1ubuntu1) ... 3648s Selecting previously unselected package python3-roman. 3649s Preparing to unpack .../231-python3-roman_5.0-1_all.deb ... 3649s Unpacking python3-roman (5.0-1) ... 3649s Selecting previously unselected package python3-docutils. 3649s Preparing to unpack .../232-python3-docutils_0.21.2+dfsg-2_all.deb ... 3649s Unpacking python3-docutils (0.21.2+dfsg-2) ... 3649s Selecting previously unselected package python3-email-validator. 3649s Preparing to unpack .../233-python3-email-validator_2.2.0-1_all.deb ... 3649s Unpacking python3-email-validator (2.2.0-1) ... 3649s Selecting previously unselected package python3-fastjsonschema. 3649s Preparing to unpack .../234-python3-fastjsonschema_2.21.1-1_all.deb ... 3649s Unpacking python3-fastjsonschema (2.21.1-1) ... 3649s Selecting previously unselected package python3-frozendict. 3649s Preparing to unpack .../235-python3-frozendict_2.4.6-1_all.deb ... 3649s Unpacking python3-frozendict (2.4.6-1) ... 3649s Selecting previously unselected package python3-h5py-serial. 3649s Preparing to unpack .../236-python3-h5py-serial_3.13.0-1_armhf.deb ... 3649s Unpacking python3-h5py-serial (3.13.0-1) ... 3649s Selecting previously unselected package python3-h5py. 3649s Preparing to unpack .../237-python3-h5py_3.13.0-1_all.deb ... 3649s Unpacking python3-h5py (3.13.0-1) ... 3649s Selecting previously unselected package python3-imagesize. 3649s 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... 3665s Setting up python3-imagesize (1.4.1-1) ... 3665s Setting up libwacom-common (2.14.0-1) ... 3665s Setting up libwayland-client0:armhf (1.23.1-3) ... 3665s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 3665s Setting up automake (1:1.17-3ubuntu1) ... 3665s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 3665s Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 3665s Setting up python3-sympy (1.13.3-5) ... 3671s Setting up libice6:armhf (2:1.1.1-1) ... 3671s Setting up mesa-libgallium:armhf (25.0.1-2ubuntu1) ... 3671s Setting up liblapack3:armhf (3.12.1-2) ... 3671s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 3671s Setting up libqt5dbus5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3671s Setting up gettext (0.23.1-1) ... 3671s Setting up libgbm1:armhf (25.0.1-2ubuntu1) ... 3671s Setting up libwacom9:armhf (2.14.0-1) ... 3671s Setting up pybuild-plugin-pyproject (6.20250308) ... 3671s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 3672s Setting up python3-pytest (8.3.5-1) ... 3672s Setting up libwebpdemux2:armhf (1.5.0-0.1) ... 3672s Setting up libgl1-mesa-dri:armhf (25.0.1-2ubuntu1) ... 3672s Setting up libqt5network5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3672s Setting up hwloc-nox (2.12.0-1) ... 3672s Setting up gcc-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 3672s Setting up python3-nbformat (5.9.1-1) ... 3672s Setting up python3-bs4 (4.13.3-2) ... 3672s Setting up libinput-bin (1.27.1-1) ... 3672s Setting up libtbbbind-2-5:armhf (2022.0.0-2) ... 3672s Setting up intltool-debian (0.35.0+20060710.6) ... 3672s Setting up libmaeparser1:armhf (1.3.1-1build1) ... 3672s Setting up libegl-mesa0:armhf (25.0.1-2ubuntu1) ... 3672s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 3672s Setting up packmol (1:20.15.3-1) ... 3672s Setting up python3-pydantic (2.10.6-1) ... 3673s Setting up libraqm0:armhf (0.10.2-1) ... 3673s Setting up python3-plotly (5.20.0+dfsg-1) ... 3681s Setting up python3-numpy (1:2.2.3+ds-5) ... 3683s Setting up libjs-sphinxdoc (8.1.3-4) ... 3683s Setting up cpp-14 (14.2.0-17ubuntu3) ... 3683s Setting up dh-strip-nondeterminism (1.14.1-2) ... 3683s Setting up libhdf5-310:armhf (1.14.5+repack-3) ... 3683s Setting up python3-lxml:armhf (5.3.1-1build1) ... 3683s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 3683s Setting up xml-core (0.19) ... 3683s Setting up libegl1:armhf (1.7.0-1build1) ... 3683s Setting up libc6-dev:armhf (2.41-1ubuntu2) ... 3683s Setting up python3-contourpy (1.3.1-1build1) ... 3683s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 3683s Setting up python3-spglib (2.5.0-2build1) ... 3683s Setting up libstdc++-14-dev:armhf (14.2.0-17ubuntu3) ... 3683s Setting up libsm6:armhf (2:1.2.4-1) ... 3683s Setting up cpp-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3683s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 3683s Setting up python3-uncertainties (3.2.2-1) ... 3683s Setting up gcc-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3683s Setting up libinput10:armhf (1.27.1-1) ... 3683s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3) ... 3683s Setting up g++-14-arm-linux-gnueabihf (14.2.0-17ubuntu3) ... 3683s Setting up fontconfig (2.15.0-2ubuntu1) ... 3686s Regenerating fonts cache... done. 3686s Setting up libxft2:armhf (2.3.6-1build1) ... 3686s Setting up libglx-mesa0:armhf (25.0.1-2ubuntu1) ... 3686s Setting up python3-scipy (1.14.1-4ubuntu2) ... 3689s Setting up libglx0:armhf (1.7.0-1build1) ... 3689s Setting up libproj25:armhf (9.5.1-1) ... 3689s Setting up mpich (4.2.1-5) ... 3689s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 3689s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 3689s Setting up po-debconf (1.0.21+nmu1) ... 3689s Setting up libtk8.6:armhf (8.6.16-1) ... 3689s Setting up python3-pandas-lib:armhf (2.2.3+dfsg-8build1) ... 3689s Setting up python3.12-tk (3.12.9-1) ... 3689s Setting up libnetcdf22:armhf (1:4.9.3-1) ... 3689s Setting up mpi-default-bin (1.18) ... 3689s Setting up python3-h5py-serial (3.13.0-1) ... 3690s Setting up libtbb12:armhf (2022.0.0-2) ... 3690s Setting up python3-mpi4py (4.0.1-6ubuntu1) ... 3690s Setting up python-pymatgen-doc (2025.2.18+dfsg1-4) ... 3690s Setting up libcairo2:armhf (1.18.2-2) ... 3690s Setting up python3.13-tk (3.13.2-2) ... 3690s Setting up gcc-14 (14.2.0-17ubuntu3) ... 3690s Setting up python3-pil:armhf (11.1.0-5build1) ... 3690s Setting up libqt5gui5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3690s Setting up libgl1:armhf (1.7.0-1build1) ... 3690s Setting up libexpat1-dev:armhf (2.6.4-1) ... 3690s Setting up python3-pandas (2.2.3+dfsg-8build1) ... 3695s Setting up libtheoradec1:armhf (1.2.0~alpha1+dfsg-5) ... 3695s Setting up sphinx-common (8.1.3-4) ... 3695s Setting up python3-h5py (3.13.0-1) ... 3696s Setting up python3-cftime (1.6.4-2) ... 3696s Setting up libglew2.2:armhf (2.2.0-4build1) ... 3696s Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 3696s Setting up cpp (4:14.2.0-1ubuntu1) ... 3696s Setting up python3-monty (2025.1.9-1) ... 3696s Setting up g++-14 (14.2.0-17ubuntu3) ... 3696s Setting up python3-netcdf4 (1.7.2-1build4) ... 3696s Setting up g++-arm-linux-gnueabihf (4:14.2.0-1ubuntu1) ... 3696s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 3696s Setting up libtool (2.5.4-4) ... 3696s Setting up libqt5widgets5t64:armhf (5.15.15+dfsg-4ubuntu1) ... 3696s Setting up blt (2.5.3+dfsg-8) ... 3696s Setting up libopenbabel7 (3.1.1+dfsg-11ubuntu3) ... 3696s Setting up python3-tk:armhf (3.13.1-1) ... 3696s Setting up gcc (4:14.2.0-1ubuntu1) ... 3696s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 3696s Setting up dh-autoreconf (20) ... 3696s Setting up libtheoraenc1:armhf (1.2.0~alpha1+dfsg-5) ... 3696s Setting up python3-pil.imagetk:armhf (11.1.0-5build1) ... 3696s Setting up libpython3.13-dev:armhf (3.13.2-2) ... 3696s Setting up libvtk9.3:armhf (9.3.0+dfsg1-4ubuntu1) ... 3696s Setting up g++ (4:14.2.0-1ubuntu1) ... 3696s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 3696s Setting up build-essential (12.10ubuntu1) ... 3696s Setting up libpython3-dev:armhf (3.13.2-2) ... 3696s Setting up libvtk9.3-qt:armhf (9.3.0+dfsg1-4ubuntu1) ... 3696s Setting up python3-openbabel (3.1.1+dfsg-11ubuntu3) ... 3696s Setting up python3.13-dev (3.13.2-2) ... 3696s Setting up debhelper (13.24.1ubuntu2) ... 3696s Setting up libpython3-all-dev:armhf (3.13.2-2) ... 3696s Setting up python3-dev (3.13.2-2) ... 3696s Setting up python3-all-dev (3.13.2-2) ... 3696s Setting up python3-vtk9 (9.3.0+dfsg1-4ubuntu1) ... 3697s /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S' 3697s patn = re.compile (" \S") 3697s Setting up python3-fonttools (4.55.3-2build1) ... 3698s Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... 3698s Setting up python3-matplotlib (3.8.3-7build1) ... 3699s Setting up python3-ase (3.23.0-1ubuntu1) ... 3701s Setting up python3-phonopy (2.35.0-1) ... 3702s Setting up python3-pymatgen (2025.2.18+dfsg1-4) ... 3703s Processing triggers for libc-bin (2.41-1ubuntu2) ... 3703s Processing triggers for man-db (2.13.0-1) ... 3705s Processing triggers for udev (257.3-1ubuntu3) ... 3705s Processing triggers for install-info (7.1.1-1) ... 3705s Processing triggers for sgml-base (1.31) ... 3705s Setting up docutils-common (0.21.2+dfsg-2) ... 3705s Processing triggers for sgml-base (1.31) ... 3705s Setting up python3-docutils (0.21.2+dfsg-2) ... 3706s Setting up python3-sphinx (8.1.3-4) ... 3707s Setting up python3-sphinxcontrib.jquery (4.1-5) ... 3707s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ... 3732s autopkgtest [16:35:57]: test test-pymatgen-net: [----------------------- 3734s running network tests with NET_TEST_LIST=test_get_structure_by_id 3734s ============================= test session starts ============================== 3734s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 3734s cachedir: .pytest_cache 3734s rootdir: /tmp/autopkgtest.mOfBxw/build.ALT/src 3734s configfile: pyproject.toml 3734s plugins: typeguard-4.4.2 3759s collecting ... collected 3117 items / 3116 deselected / 7 skipped / 1 selected 3759s 3760s tests/ext/test_cod.py::TestCOD::test_get_structure_by_id PASSED [100%] 3760s 3760s ============================= slowest 30 durations ============================= 3760s 0.54s call tests/ext/test_cod.py::TestCOD::test_get_structure_by_id 3760s 3760s (2 durations < 0.005s hidden. Use -vv to show these durations.) 3760s =========================== short test summary info ============================ 3760s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:27: No boltztrap2 3760s SKIPPED [1] tests/ext/test_matproj.py:44: MP API is down 3760s SKIPPED [1] tests/io/test_openff.py:25: could not import 'openff.toolkit': No module named 'openff' 3760s SKIPPED [1] tests/io/test_shengbte.py:10: could not import 'f90nml': No module named 'f90nml' 3760s SKIPPED [1] tests/io/test_zeopp.py:20: zeo not installed 3760s SKIPPED [1] tests/performance/test_import_time.py:32: ref time only comparable in CI runner 3760s SKIPPED [1] tests/symmetry/test_kpath_hin.py:11: seekpath not installed 3760s ================ 1 passed, 7 skipped, 3116 deselected in 25.53s ================ 3762s autopkgtest [16:36:27]: test test-pymatgen-net: -----------------------] 3765s autopkgtest [16:36:30]: test test-pymatgen-net: - - - - - - - - - - results - - - - - - - - - - 3765s test-pymatgen-net PASS 3769s autopkgtest [16:36:34]: @@@@@@@@@@@@@@@@@@@@ summary 3769s test-pymatgen PASS 3769s test-pymatgen-net PASS