0s autopkgtest [15:07:16]: starting date and time: 2025-03-15 15:07:16+0000 0s autopkgtest [15:07:16]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [15:07:16]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nan3czgh/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade paml --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.9 lxd-armhf-10.145.243.9:autopkgtest/ubuntu/plucky/armhf 29s autopkgtest [15:07:45]: testbed dpkg architecture: armhf 31s autopkgtest [15:07:47]: testbed apt version: 2.9.33 35s autopkgtest [15:07:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s autopkgtest [15:07:53]: testbed release detected to be: None 45s autopkgtest [15:08:01]: updating testbed package index (apt update) 47s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 47s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 47s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 48s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 48s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 48s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 48s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 48s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [81.0 kB] 48s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1944 B] 49s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 49s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [326 kB] 49s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [12.1 kB] 49s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 49s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [332 B] 49s Get:15 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 70s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 70s Get:17 http://ftpmaster.internal/ubuntu plucky/main Sources [1400 kB] 72s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 73s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 73s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 73s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 89s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 91s Fetched 41.0 MB in 44s (937 kB/s) 92s Reading package lists... 98s autopkgtest [15:08:54]: upgrading testbed (apt dist-upgrade and autopurge) 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 101s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 101s Starting 2 pkgProblemResolver with broken count: 0 102s Done 103s Entering ResolveByKeep 103s 104s Calculating upgrade... 105s The following packages will be upgraded: 105s libc-bin libc6 locales python3-jinja2 sos strace 105s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 105s Need to get 8642 kB of archives. 105s After this operation, 23.6 kB of additional disk space will be used. 105s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 108s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 113s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 113s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 114s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 115s Preconfiguring packages ... 115s Fetched 8642 kB in 9s (952 kB/s) 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 115s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 115s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 116s Setting up libc6:armhf (2.41-1ubuntu2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 116s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 116s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 116s Setting up libc-bin (2.41-1ubuntu2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 116s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 116s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 117s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 117s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 117s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 117s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 117s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 118s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 118s Setting up sos (4.9.0-5) ... 119s Setting up locales (2.41-1ubuntu2) ... 120s Generating locales (this might take a while)... 124s en_US.UTF-8... done 124s Generation complete. 124s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 124s Setting up strace (6.13+ds-1ubuntu1) ... 124s Processing triggers for man-db (2.13.0-1) ... 126s Processing triggers for systemd (257.3-1ubuntu3) ... 128s Reading package lists... 129s Building dependency tree... 129s Reading state information... 130s Starting pkgProblemResolver with broken count: 0 130s Starting 2 pkgProblemResolver with broken count: 0 130s Done 131s Solving dependencies... 132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 134s autopkgtest [15:09:30]: rebooting testbed after setup commands that affected boot 175s autopkgtest [15:10:11]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 200s autopkgtest [15:10:36]: @@@@@@@@@@@@@@@@@@@@ apt-source paml 215s Get:1 http://ftpmaster.internal/ubuntu plucky/universe paml 4.9j+dfsg-6 (dsc) [2244 B] 215s Get:2 http://ftpmaster.internal/ubuntu plucky/universe paml 4.9j+dfsg-6 (tar) [1375 kB] 215s Get:3 http://ftpmaster.internal/ubuntu plucky/universe paml 4.9j+dfsg-6 (diff) [8604 B] 216s gpgv: Signature made Wed Feb 26 22:07:37 2025 UTC 216s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 216s gpgv: issuer "emollier@debian.org" 216s gpgv: Can't check signature: No public key 216s dpkg-source: warning: cannot verify inline signature for ./paml_4.9j+dfsg-6.dsc: no acceptable signature found 216s autopkgtest [15:10:52]: testing package paml version 4.9j+dfsg-6 218s autopkgtest [15:10:54]: build not needed 220s autopkgtest [15:10:56]: test run-unit-test: preparing testbed 222s Reading package lists... 223s Building dependency tree... 223s Reading state information... 223s Starting pkgProblemResolver with broken count: 0 224s Starting 2 pkgProblemResolver with broken count: 0 224s Done 225s The following NEW packages will be installed: 225s paml paml-doc 225s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 225s Need to get 1662 kB of archives. 225s After this operation, 8821 kB of additional disk space will be used. 225s Get:1 http://ftpmaster.internal/ubuntu plucky/universe armhf paml armhf 4.9j+dfsg-6 [660 kB] 226s Get:2 http://ftpmaster.internal/ubuntu plucky/universe armhf paml-doc all 4.9j+dfsg-6 [1002 kB] 228s Fetched 1662 kB in 2s (764 kB/s) 228s Selecting previously unselected package paml. 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 228s Preparing to unpack .../paml_4.9j+dfsg-6_armhf.deb ... 228s Unpacking paml (4.9j+dfsg-6) ... 228s Selecting previously unselected package paml-doc. 228s Preparing to unpack .../paml-doc_4.9j+dfsg-6_all.deb ... 228s Unpacking paml-doc (4.9j+dfsg-6) ... 228s Setting up paml-doc (4.9j+dfsg-6) ... 228s Setting up paml (4.9j+dfsg-6) ... 239s autopkgtest [15:11:15]: test run-unit-test: [----------------------- 241s Test 4 244s 244s CODONML in paml version 4.9j, October 2019 244s 244s ---------------------------------------------- 244s Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT 244s TTC | TCC | TAC | TGC 244s Leu L TTA | TCA | *** * TAA | *** * TGA 244s TTG | TCG | TAG | Trp W TGG 244s ---------------------------------------------- 244s Leu L CTT | Pro P CCT | His H CAT | Arg R CGT 244s CTC | CCC | CAC | CGC 244s CTA | CCA | Gln Q CAA | CGA 244s CTG | CCG | CAG | CGG 244s ---------------------------------------------- 244s Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT 244s ATC | ACC | AAC | AGC 244s ATA | ACA | Lys K AAA | Arg R AGA 244s Met M ATG | ACG | AAG | AGG 244s ---------------------------------------------- 244s Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT 244s GTC | GCC | GAC | GGC 244s GTA | GCA | Glu E GAA | GGA 244s GTG | GCG | GAG | GGG 244s ---------------------------------------------- 244s Nice code, uuh? 244s ns = 7 ls = 390 244s Reading sequences, sequential format.. 244s Reading seq # 1: Hsa_Human Reading seq # 2: Hla_gibbon Reading seq # 3: Cgu/Can_colobus Reading seq # 4: Pne_langur Reading seq # 5: Mmu_rhesus Reading seq # 6: Ssc_squirrelM Reading seq # 7: Cja_marmoset 244s Sequences read.. 244s Counting site patterns.. 0:00 244s Compressing, 81 patterns at 130 / 130 sites (100.0%), 0:00 244s Collecting fpatt[] & pose[], 81 patterns at 130 / 130 sites (100.0%), 0:00 244s Counting codons.. 244s 244s 168 bytes for distance 244s 79056 bytes for conP 244s 0 bytes for fhK 244s 5000000 bytes for space 244s 244s 2 branch types are in tree. Stop if wrong. 244s TREE # 1 244s ((1, 2), ((3, 4), 5), (6, 7)); MP score: 65 244s 197640 bytes for conP, adjusted 244s 244s 0.064212 0.075388 0.020984 0.070326 0.043639 0.033649 0.034368 0.076888 0.068374 0.032997 0.097699 0.992998 0.997295 0.939591 244s 244s ntime & nrate & np: 11 3 14 244s 244s Bounds (np=14): 244s 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000100 0.000100 244s 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 999.000000 999.000000 244s 244s np = 14 244s lnL0 = -939.374041 244s 244s Iterating by ming2 244s Initial: fx= 939.374041 244s x= 0.06421 0.07539 0.02098 0.07033 0.04364 0.03365 0.03437 0.07689 0.06837 0.03300 0.09770 0.99300 0.99729 0.93959 244s 244s 1 h-m-p 0.0000 0.0010 209.7149 +++YYYYC 927.151534 4 0.0006 26 | 0/14 244s 2 h-m-p 0.0001 0.0006 107.5000 YCYCCC 925.510598 5 0.0003 51 | 0/14 244s 3 h-m-p 0.0003 0.0017 45.8070 CCCC 925.101075 3 0.0005 74 | 0/14 244s 4 h-m-p 0.0002 0.0033 88.8039 YC 924.313750 1 0.0006 92 | 0/14 244s 5 h-m-p 0.0005 0.0048 104.4241 YCCC 922.826747 3 0.0012 114 | 0/14 244s 6 h-m-p 0.0005 0.0025 187.7097 +YCYCCC 919.116498 5 0.0015 140 | 0/14 244s 7 h-m-p 0.0002 0.0010 859.7051 YCCCCC 915.414537 5 0.0004 166 | 0/14 244s 8 h-m-p 0.0006 0.0032 397.4095 YCCCCC 910.133742 5 0.0012 192 | 0/14 244s 9 h-m-p 0.0006 0.0030 41.1765 YYC 909.934369 2 0.0005 211 | 0/14 244s 10 h-m-p 0.0048 0.0242 4.5274 YC 909.924836 1 0.0009 229 | 0/14 244s 11 h-m-p 0.0011 0.5594 4.6510 ++YCCC 909.654518 3 0.0353 253 | 0/14 244s 12 h-m-p 0.0011 0.0053 62.6073 YCCC 909.577705 3 0.0007 275 | 0/14 244s 13 h-m-p 0.0115 0.2301 3.7220 +CCC 909.273770 2 0.0458 297 | 0/14 244s 14 h-m-p 0.0007 0.0147 240.6466 +YCCCCC 906.406804 5 0.0069 324 | 0/14 244s 15 h-m-p 0.8753 4.3765 0.7168 YCCCC 904.754165 4 1.6843 348 | 0/14 244s 16 h-m-p 1.4755 8.0000 0.8183 CCCC 904.026829 3 1.3504 385 | 0/14 244s 17 h-m-p 1.4215 8.0000 0.7774 CYC 903.576932 2 1.7531 419 | 0/14 244s 18 h-m-p 1.6000 8.0000 0.4150 CYC 903.485857 2 1.4154 453 | 0/14 244s 19 h-m-p 1.6000 8.0000 0.2053 YC 903.473862 1 1.1825 485 | 0/14 244s 20 h-m-p 1.3143 8.0000 0.1847 CC 903.465150 1 2.0122 518 | 0/14 249s 21 h-m-p 1.6000 8.0000 0.1729 ++ 903.429070 m 8.0000 549 | 0/14 249s 22 h-m-p 1.5041 8.0000 0.9197 +CCC 903.317552 2 5.1865 585 | 0/14 249s 23 h-m-p 1.6000 8.0000 1.9684 CCC 903.244024 2 1.9456 620 | 0/14 249s 24 h-m-p 1.5880 8.0000 2.4117 YCC 903.195355 2 3.0613 640 | 0/14 249s 25 h-m-p 1.6000 8.0000 3.3581 YCCC 903.158636 3 3.2699 662 | 0/14 249s 26 h-m-p 1.6000 8.0000 5.4483 YCC 903.131874 2 2.9050 682 | 0/14 249s 27 h-m-p 1.6000 8.0000 7.6561 YCC 903.113858 2 3.1128 702 | 0/14 249s 28 h-m-p 1.6000 8.0000 11.3466 YC 903.101267 1 2.9822 720 | 0/14 249s 29 h-m-p 1.6000 8.0000 16.3596 YCC 903.092626 2 3.0599 740 | 0/14 249s 30 h-m-p 1.6000 8.0000 24.3082 YC 903.086642 1 3.1033 758 | 0/14 249s 31 h-m-p 1.6000 8.0000 35.3626 YC 903.082761 1 2.7912 776 | 0/14 249s 32 h-m-p 1.6000 8.0000 50.9140 YC 903.079999 1 2.9739 794 | 0/14 249s 33 h-m-p 1.3936 6.9678 73.8073 YC 903.078052 1 2.8898 812 | 0/14 249s 34 h-m-p 0.5742 2.8711 104.8310 ++ 903.076684 m 2.8711 829 | 1/14 249s 35 h-m-p 1.6000 8.0000 0.0110 YC 903.076551 1 1.0034 847 | 1/14 249s 36 h-m-p 1.6000 8.0000 0.0000 Y 903.076551 0 1.2183 877 | 1/14 249s 37 h-m-p 1.6000 8.0000 0.0000 C 903.076551 0 1.6000 907 | 1/14 249s 38 h-m-p 1.6000 8.0000 0.0000 -Y 903.076551 0 0.1000 938 249s Out.. 249s lnL = -903.076551 249s 939 lfun, 1878 eigenQcodon, 10329 P(t) 249s 249s 2 branch types are in tree. Stop if wrong. 249s TREE # 2 249s ((1, 2), ((3, 4), 5), (6, 7)); MP score: 65 249s 0.059413 0.035865 0.011320 0.088863 0.091211 0.089572 0.060617 0.105638 0.058628 0.098891 0.106590 0.824923 1.015115 0.975062 249s 249s ntime & nrate & np: 11 3 14 249s 249s Bounds (np=14): 249s 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000100 0.000100 249s 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 999.000000 999.000000 249s 249s np = 14 249s lnL0 = -952.826343 249s 249s Iterating by ming2 249s Initial: fx= 952.826343 249s x= 0.05941 0.03587 0.01132 0.08886 0.09121 0.08957 0.06062 0.10564 0.05863 0.09889 0.10659 0.82492 1.01511 0.97506 249s 249s 1 h-m-p 0.0000 0.0011 313.4607 +++YYC 939.231503 2 0.0006 24 | 0/14 249s 2 h-m-p 0.0001 0.0006 160.9116 +YCYCCC 934.130917 5 0.0004 50 | 0/14 249s 3 h-m-p 0.0007 0.0033 48.4198 CCC 933.244133 2 0.0009 71 | 0/14 249s 4 h-m-p 0.0003 0.0032 135.0685 +CCYC 930.755425 3 0.0011 94 | 0/14 249s 5 h-m-p 0.0002 0.0008 259.6450 YCCCC 929.075608 4 0.0004 118 | 0/14 249s 6 h-m-p 0.0005 0.0023 191.0688 YCCCC 925.830898 4 0.0011 142 | 0/14 249s 7 h-m-p 0.0008 0.0042 182.1805 YCCCCC 920.536276 5 0.0019 168 | 0/14 249s 8 h-m-p 0.0003 0.0013 694.9941 YCCCCC 914.882595 5 0.0006 194 | 0/14 249s 9 h-m-p 0.0004 0.0019 83.3812 CCCC 914.501485 3 0.0004 217 | 0/14 249s 10 h-m-p 0.0014 0.0072 16.1796 CCC 914.454191 2 0.0005 238 | 0/14 249s 11 h-m-p 0.0008 0.0210 9.0864 +YCC 914.372072 2 0.0024 259 | 0/14 249s 12 h-m-p 0.0004 0.0128 49.5255 +YCCCCC 913.586556 5 0.0037 286 | 0/14 249s 13 h-m-p 0.0161 0.0804 5.8067 -CCC 913.570768 2 0.0010 308 | 0/14 249s 14 h-m-p 0.0011 0.5695 7.7644 ++++CYCCC 907.079783 4 0.3391 336 | 0/14 249s 15 h-m-p 0.2409 1.2045 1.6402 YCCCC 904.644999 4 0.5308 360 | 0/14 249s 16 h-m-p 0.6563 3.2817 0.6481 CYCCC 903.115399 4 1.0231 384 | 0/14 249s 17 h-m-p 1.6000 8.0000 0.2463 CCCC 902.588521 3 1.9201 421 | 0/14 249s 18 h-m-p 0.7470 8.0000 0.6330 CYCC 902.097132 3 0.8004 457 | 0/14 249s 19 h-m-p 0.9927 8.0000 0.5103 YCCC 901.699834 3 1.8879 493 | 0/14 249s 20 h-m-p 1.6000 8.0000 0.2166 CC 901.639850 1 1.6440 526 | 0/14 249s 21 h-m-p 1.6000 8.0000 0.0837 YC 901.632762 1 0.8024 558 | 0/14 249s 22 h-m-p 1.6000 8.0000 0.0304 CC 901.632024 1 1.4026 591 | 0/14 249s 23 h-m-p 1.6000 8.0000 0.0128 C 901.631896 0 1.7554 622 | 0/14 249s 24 h-m-p 1.6000 8.0000 0.0057 +Y 901.631755 0 5.2933 654 | 0/14 250s 25 h-m-p 1.2370 8.0000 0.0244 ++ 901.631185 m 8.0000 685 | 0/14 250s 26 h-m-p 1.6000 8.0000 0.0766 C 901.630913 0 1.6000 716 | 0/14 250s 27 h-m-p 1.6000 8.0000 0.0121 C 901.630891 0 1.3218 747 | 0/14 250s 28 h-m-p 1.6000 8.0000 0.0007 Y 901.630891 0 1.2537 778 | 0/14 250s 29 h-m-p 1.6000 8.0000 0.0000 Y 901.630891 0 1.1833 809 | 0/14 250s 30 h-m-p 1.6000 8.0000 0.0000 Y 901.630891 0 0.7331 840 | 0/14 250s 31 h-m-p 1.6000 8.0000 0.0000 Y 901.630891 0 0.2904 871 | 0/14 250s 32 h-m-p 0.4513 8.0000 0.0000 -----N 901.630891 0 0.0001 907 250s Out.. 250s lnL = -901.630891 250s 908 lfun, 1816 eigenQcodon, 9988 P(t) 250s 250s Tree comparisons (Kishino & Hasegawa 1989; Shimodaira & Hasegawa 1999) 250s Reading lnf for tree # 1 Reading lnf for tree # 2, done. 250s Calculating SEs by sitewise comparison, 0:09 250s RELL Bootstrapping.. replicate: 100 / 10000 0:09 RELL Bootstrapping.. replicate: 200 / 10000 0:09 RELL Bootstrapping.. replicate: 300 / 10000 0:09 RELL Bootstrapping.. replicate: 400 / 10000 0:09 RELL Bootstrapping.. replicate: 500 / 10000 0:09 RELL Bootstrapping.. replicate: 600 / 10000 0:09 RELL Bootstrapping.. replicate: 700 / 10000 0:09 RELL Bootstrapping.. replicate: 800 / 10000 0:09 RELL Bootstrapping.. replicate: 900 / 10000 0:09 RELL Bootstrapping.. replicate: 1000 / 10000 0:09 RELL Bootstrapping.. replicate: 1100 / 10000 0:09 RELL Bootstrapping.. replicate: 1200 / 10000 0:09 RELL Bootstrapping.. replicate: 1300 / 10000 0:09 RELL Bootstrapping.. replicate: 1400 / 10000 0:09 RELL Bootstrapping.. replicate: 1500 / 10000 0:09 RELL Bootstrapping.. replicate: 1600 / 10000 0:09 RELL Bootstrapping.. replicate: 1700 / 10000 0:09 RELL Bootstrapping.. replicate: 1800 / 10000 0:09 RELL Bootstrapping.. replicate: 1900 / 10000 0:09 RELL Bootstrapping.. replicate: 2000 / 10000 0:09 RELL Bootstrapping.. replicate: 2100 / 10000 0:09 RELL Bootstrapping.. replicate: 2200 / 10000 0:09 RELL Bootstrapping.. replicate: 2300 / 10000 0:09 RELL Bootstrapping.. replicate: 2400 / 10000 0:09 RELL Bootstrapping.. replicate: 2500 / 10000 0:09 RELL Bootstrapping.. replicate: 2600 / 10000 0:09 RELL Bootstrapping.. replicate: 2700 / 10000 0:09 RELL Bootstrapping.. replicate: 2800 / 10000 0:09 RELL Bootstrapping.. replicate: 2900 / 10000 0:09 RELL Bootstrapping.. replicate: 3000 / 10000 0:09 RELL Bootstrapping.. replicate: 3100 / 10000 0:09 RELL Bootstrapping.. replicate: 3200 / 10000 0:09 RELL Bootstrapping.. replicate: 3300 / 10000 0:09 RELL Bootstrapping.. replicate: 3400 / 10000 0:09 RELL Bootstrapping.. replicate: 3500 / 10000 0:09 RELL Bootstrapping.. replicate: 3600 / 10000 0:09 RELL Bootstrapping.. replicate: 3700 / 10000 0:09 RELL Bootstrapping.. replicate: 3800 / 10000 0:09 RELL Bootstrapping.. replicate: 3900 / 10000 0:09 RELL Bootstrapping.. replicate: 4000 / 10000 0:09 RELL Bootstrapping.. replicate: 4100 / 10000 0:09 RELL Bootstrapping.. replicate: 4200 / 10000 0:09 RELL Bootstrapping.. replicate: 4300 / 10000 0:09 RELL Bootstrapping.. replicate: 4400 / 10000 0:09 RELL Bootstrapping.. replicate: 4500 / 10000 0:09 RELL Bootstrapping.. replicate: 4600 / 10000 0:09 RELL Bootstrapping.. replicate: 4700 / 10000 0:09 RELL Bootstrapping.. replicate: 4800 / 10000 0:09 RELL Bootstrapping.. replicate: 4900 / 10000 0:09 RELL Bootstrapping.. replicate: 5000 / 10000 0:09 RELL Bootstrapping.. replicate: 5100 / 10000 0:09 RELL Bootstrapping.. replicate: 5200 / 10000 0:09 RELL Bootstrapping.. replicate: 5300 / 10000 0:09 RELL Bootstrapping.. replicate: 5400 / 10000 0:09 RELL Bootstrapping.. replicate: 5500 / 10000 0:09 RELL Bootstrapping.. replicate: 5600 / 10000 0:09 RELL Bootstrapping.. replicate: 5700 / 10000 0:09 RELL Bootstrapping.. replicate: 5800 / 10000 0:09 RELL Bootstrapping.. replicate: 5900 / 10000 0:09 RELL Bootstrapping.. replicate: 6000 / 10000 0:09 RELL Bootstrapping.. replicate: 6100 / 10000 0:09 RELL Bootstrapping.. replicate: 6200 / 10000 0:09 RELL Bootstrapping.. replicate: 6300 / 10000 0:09 RELL Bootstrapping.. replicate: 6400 / 10000 0:09 RELL Bootstrapping.. replicate: 6500 / 10000 0:09 RELL Bootstrapping.. replicate: 6600 / 10000 0:09 RELL Bootstrapping.. replicate: 6700 / 10000 0:09 RELL Bootstrapping.. replicate: 6800 / 10000 0:09 RELL Bootstrapping.. replicate: 6900 / 10000 0:09 RELL Bootstrapping.. replicate: 7000 / 10000 0:09 RELL Bootstrapping.. replicate: 7100 / 10000 0:09 RELL Bootstrapping.. replicate: 7200 / 10000 0:09 RELL Bootstrapping.. replicate: 7300 / 10000 0:09 RELL Bootstrapping.. replicate: 7400 / 10000 0:09 RELL Bootstrapping.. replicate: 7500 / 10000 0:09 RELL Bootstrapping.. replicate: 7600 / 10000 0:09 RELL Bootstrapping.. replicate: 7700 / 10000 0:09 RELL Bootstrapping.. replicate: 7800 / 10000 0:09 RELL Bootstrapping.. replicate: 7900 / 10000 0:09 RELL Bootstrapping.. replicate: 8000 / 10000 0:09 RELL Bootstrapping.. replicate: 8100 / 10000 0:09 RELL Bootstrapping.. replicate: 8200 / 10000 0:09 RELL Bootstrapping.. replicate: 8300 / 10000 0:09 RELL Bootstrapping.. replicate: 8400 / 10000 0:09 RELL Bootstrapping.. replicate: 8500 / 10000 0:09 RELL Bootstrapping.. replicate: 8600 / 10000 0:09 RELL Bootstrapping.. replicate: 8700 / 10000 0:09 RELL Bootstrapping.. replicate: 8800 / 10000 0:09 RELL Bootstrapping.. replicate: 8900 / 10000 0:09 RELL Bootstrapping.. replicate: 9000 / 10000 0:09 RELL Bootstrapping.. replicate: 9100 / 10000 0:09 RELL Bootstrapping.. replicate: 9200 / 10000 0:09 RELL Bootstrapping.. replicate: 9300 / 10000 0:09 RELL Bootstrapping.. replicate: 9400 / 10000 0:09 RELL Bootstrapping.. replicate: 9500 / 10000 0:09 RELL Bootstrapping.. replicate: 9600 / 10000 0:09 RELL Bootstrapping.. replicate: 9700 / 10000 0:09 RELL Bootstrapping.. replicate: 9800 / 10000 0:09 RELL Bootstrapping.. replicate: 9900 / 10000 0:09 RELL Bootstrapping.. replicate: 10000 / 10000 0:09 250s now doing S-H test 250s 250s Time used: 0:09 250s Passed 250s 250s autopkgtest [15:11:26]: test run-unit-test: -----------------------] 254s autopkgtest [15:11:30]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 254s run-unit-test PASS 258s autopkgtest [15:11:34]: @@@@@@@@@@@@@@@@@@@@ summary 258s run-unit-test PASS