0s autopkgtest [14:41:05]: starting date and time: 2025-03-15 14:41:05+0000 0s autopkgtest [14:41:05]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [14:41:05]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5c_gect8/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- lxd -r lxd-armhf-10.145.243.229 lxd-armhf-10.145.243.229:autopkgtest/ubuntu/plucky/armhf 20s autopkgtest [14:41:25]: testbed dpkg architecture: armhf 22s autopkgtest [14:41:27]: testbed apt version: 2.9.33 26s autopkgtest [14:41:31]: @@@@@@@@@@@@@@@@@@@@ test bed setup 28s autopkgtest [14:41:33]: testbed release detected to be: None 36s autopkgtest [14:41:41]: updating testbed package index (apt update) 38s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 38s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 38s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 39s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 39s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 39s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 40s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 40s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [81.0 kB] 40s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1944 B] 40s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 40s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [326 kB] 40s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [12.1 kB] 40s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 40s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [332 B] 40s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1400 kB] 42s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 42s Get:17 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 71s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 72s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 73s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 73s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 91s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 93s Fetched 41.0 MB in 55s (745 kB/s) 94s Reading package lists... 100s autopkgtest [14:42:45]: upgrading testbed (apt dist-upgrade and autopurge) 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 103s Starting 2 pkgProblemResolver with broken count: 0 103s Done 104s Entering ResolveByKeep 104s 104s Calculating upgrade... 104s The following packages will be upgraded: 104s libc-bin libc6 locales python3-jinja2 sos strace 104s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s Need to get 8642 kB of archives. 104s After this operation, 23.6 kB of additional disk space will be used. 104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 108s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 114s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 114s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 114s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 115s Preconfiguring packages ... 115s Fetched 8642 kB in 10s (827 kB/s) 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 115s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 115s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 116s Setting up libc6:armhf (2.41-1ubuntu2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 116s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 116s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 116s Setting up libc-bin (2.41-1ubuntu2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 116s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 116s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 116s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 116s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 116s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 117s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 117s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 117s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 117s Setting up sos (4.9.0-5) ... 117s Setting up locales (2.41-1ubuntu2) ... 118s Generating locales (this might take a while)... 120s en_US.UTF-8... done 120s Generation complete. 120s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 120s Setting up strace (6.13+ds-1ubuntu1) ... 120s Processing triggers for man-db (2.13.0-1) ... 121s Processing triggers for systemd (257.3-1ubuntu3) ... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Starting pkgProblemResolver with broken count: 0 124s Starting 2 pkgProblemResolver with broken count: 0 124s Done 125s Solving dependencies... 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s autopkgtest [14:43:12]: rebooting testbed after setup commands that affected boot 170s autopkgtest [14:43:55]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 195s autopkgtest [14:44:20]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 409s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 409s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (tar) [168 MB] 409s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nwchem 7.2.3-7build1 (diff) [560 kB] 410s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 410s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 410s gpgv: Can't check signature: No public key 410s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 469s autopkgtest [14:48:54]: testing package nwchem version 7.2.3-7build1 472s testsuite-openmpi SKIP Test declares architecture as not supported: armhf 472s autopkgtest [14:48:57]: build not needed 517s testsuite-openmpi SKIP Test declares architecture as not supported: armhf 517s autopkgtest [14:49:42]: test testsuite.sh: preparing testbed 519s Reading package lists... 519s Building dependency tree... 519s Reading state information... 520s Starting pkgProblemResolver with broken count: 0 520s Starting 2 pkgProblemResolver with broken count: 0 520s Done 521s The following NEW packages will be installed: 521s hwloc-nox libblas3 libgfortran5 libhwloc15 liblapack3 libmpich12 521s libpython3.13 libscalapack-mpich2.2 libslurm42t64 mpi-default-bin mpich 521s nwchem nwchem-data nwchem-mpich 521s 0 upgraded, 14 newly installed, 0 to remove and 0 not upgraded. 521s Need to get 26.9 MB of archives. 521s After this operation, 113 MB of additional disk space will be used. 521s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 521s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 521s Get:3 http://ftpmaster.internal/ubuntu plucky/universe armhf libhwloc15 armhf 2.12.0-1 [147 kB] 522s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 524s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.2-2 [2079 kB] 526s Get:6 http://ftpmaster.internal/ubuntu plucky/universe armhf hwloc-nox armhf 2.12.0-1 [213 kB] 526s Get:7 http://ftpmaster.internal/ubuntu plucky/universe armhf libmpich12 armhf 4.2.1-5 [1574 kB] 528s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf libslurm42t64 armhf 24.11.1-1 [769 kB] 529s Get:9 http://ftpmaster.internal/ubuntu plucky/universe armhf mpich armhf 4.2.1-5 [214 kB] 529s Get:10 http://ftpmaster.internal/ubuntu plucky/universe armhf mpi-default-bin armhf 1.18 [2504 B] 529s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf libscalapack-mpich2.2 armhf 2.2.2-1ubuntu1 [1464 kB] 530s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf nwchem-data all 7.2.3-7build1 [6076 kB] 537s Get:13 http://ftpmaster.internal/ubuntu plucky/universe armhf nwchem-mpich armhf 7.2.3-7build1 [11.8 MB] 550s Get:14 http://ftpmaster.internal/ubuntu plucky/universe armhf nwchem all 7.2.3-7build1 [17.9 kB] 551s Fetched 26.9 MB in 30s (905 kB/s) 551s Selecting previously unselected package libblas3:armhf. 551s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 551s Preparing to unpack .../00-libblas3_3.12.1-2_armhf.deb ... 551s Unpacking libblas3:armhf (3.12.1-2) ... 551s Selecting previously unselected package libgfortran5:armhf. 551s Preparing to unpack .../01-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 551s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 551s Selecting previously unselected package libhwloc15:armhf. 551s Preparing to unpack .../02-libhwloc15_2.12.0-1_armhf.deb ... 551s Unpacking libhwloc15:armhf (2.12.0-1) ... 551s Selecting previously unselected package liblapack3:armhf. 551s Preparing to unpack .../03-liblapack3_3.12.1-2_armhf.deb ... 551s Unpacking liblapack3:armhf (3.12.1-2) ... 551s Selecting previously unselected package libpython3.13:armhf. 551s Preparing to unpack .../04-libpython3.13_3.13.2-2_armhf.deb ... 551s Unpacking libpython3.13:armhf (3.13.2-2) ... 551s Selecting previously unselected package hwloc-nox. 551s Preparing to unpack .../05-hwloc-nox_2.12.0-1_armhf.deb ... 551s Unpacking hwloc-nox (2.12.0-1) ... 551s Selecting previously unselected package libmpich12:armhf. 551s Preparing to unpack .../06-libmpich12_4.2.1-5_armhf.deb ... 551s Unpacking libmpich12:armhf (4.2.1-5) ... 551s Selecting previously unselected package libslurm42t64. 551s Preparing to unpack .../07-libslurm42t64_24.11.1-1_armhf.deb ... 551s Unpacking libslurm42t64 (24.11.1-1) ... 551s Selecting previously unselected package mpich. 551s Preparing to unpack .../08-mpich_4.2.1-5_armhf.deb ... 551s Unpacking mpich (4.2.1-5) ... 551s Selecting previously unselected package mpi-default-bin. 551s Preparing to unpack .../09-mpi-default-bin_1.18_armhf.deb ... 551s Unpacking mpi-default-bin (1.18) ... 551s Selecting previously unselected package libscalapack-mpich2.2:armhf. 551s Preparing to unpack .../10-libscalapack-mpich2.2_2.2.2-1ubuntu1_armhf.deb ... 551s Unpacking libscalapack-mpich2.2:armhf (2.2.2-1ubuntu1) ... 551s Selecting previously unselected package nwchem-data. 551s Preparing to unpack .../11-nwchem-data_7.2.3-7build1_all.deb ... 551s Unpacking nwchem-data (7.2.3-7build1) ... 552s Selecting previously unselected package nwchem-mpich. 552s Preparing to unpack .../12-nwchem-mpich_7.2.3-7build1_armhf.deb ... 552s Unpacking nwchem-mpich (7.2.3-7build1) ... 552s Selecting previously unselected package nwchem. 552s Preparing to unpack .../13-nwchem_7.2.3-7build1_all.deb ... 552s Unpacking nwchem (7.2.3-7build1) ... 552s Setting up libpython3.13:armhf (3.13.2-2) ... 552s Setting up nwchem-data (7.2.3-7build1) ... 552s Setting up libblas3:armhf (3.12.1-2) ... 552s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 552s Setting up libslurm42t64 (24.11.1-1) ... 552s Setting up libhwloc15:armhf (2.12.0-1) ... 552s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 552s Setting up libmpich12:armhf (4.2.1-5) ... 552s Setting up liblapack3:armhf (3.12.1-2) ... 552s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 552s Setting up hwloc-nox (2.12.0-1) ... 552s Setting up mpich (4.2.1-5) ... 552s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 552s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 552s Setting up mpi-default-bin (1.18) ... 552s Setting up libscalapack-mpich2.2:armhf (2.2.2-1ubuntu1) ... 552s Setting up nwchem-mpich (7.2.3-7build1) ... 552s Setting up nwchem (7.2.3-7build1) ... 552s Processing triggers for man-db (2.13.0-1) ... 552s Processing triggers for libc-bin (2.41-1ubuntu2) ... 560s autopkgtest [14:50:25]: test testsuite.sh: [----------------------- 562s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 562s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 562s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 562s skipping extra tests on armhf 562s 562s 562s Running tests/dft_he2+/dft_he2+ 562s 562s cleaning scratch 562s copying input and verified output files 562s running nwchem (/usr/bin/nwchem) with 1 processors 562s 578s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 578s OK 578s 578s Running tests/qmmm_grad0/qmmm_grad0 578s 578s cleaning scratch 578s copying input and verified output files 578s running nwchem (/usr/bin/nwchem) with 1 processors 578s 584s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 584s OK 584s 584s Running tests/auh2o/auh2o 584s 584s cleaning scratch 584s copying input and verified output files 584s running nwchem (/usr/bin/nwchem) with 1 processors 584s 587s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 587s OK 587s 587s Running tests/autosym/autosym 587s 587s cleaning scratch 587s copying input and verified output files 587s running nwchem (/usr/bin/nwchem) with 1 processors 587s 603s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 603s OK 603s 603s Running tests/h2mp2/h2mp2 603s 603s cleaning scratch 603s copying input and verified output files 603s running nwchem (/usr/bin/nwchem) with 1 processors 603s 607s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 607s OK 607s 607s Running tests/h2o/h2o 607s 607s cleaning scratch 607s copying input and verified output files 607s running nwchem (/usr/bin/nwchem) with 1 processors 607s 608s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 608s OK 608s 608s Running tests/hess_h2o/hess_h2o 608s 608s cleaning scratch 608s copying input and verified output files 608s running nwchem (/usr/bin/nwchem) with 1 processors 608s 616s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 616s OK 616s 616s Running tests/prop_h2o/prop_h2o 616s 616s cleaning scratch 616s copying input and verified output files 616s running nwchem (/usr/bin/nwchem) with 1 processors 616s 621s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 621s OK 621s 621s Running tests/geom_zmatrix/geom_zmatrix 621s 621s cleaning scratch 621s copying input and verified output files 621s running nwchem (/usr/bin/nwchem) with 1 processors 621s 626s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 626s OK 626s 626s Running tests/rimp2_ne/rimp2_ne 626s 626s cleaning scratch 626s copying input and verified output files 626s running nwchem (/usr/bin/nwchem) with 1 processors 626s 630s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 630s OK 630s 630s Running tests/small_intchk/small_intchk 630s 630s cleaning scratch 630s copying input and verified output files 630s running nwchem (/usr/bin/nwchem) with 1 processors 630s 639s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 639s OK 639s 639s Running tests/tagcheck/tagcheck 639s 639s cleaning scratch 639s copying input and verified output files 639s running nwchem (/usr/bin/nwchem) with 1 processors 639s 643s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 643s OK 643s 643s Running tests/testtab/testtab 643s 643s cleaning scratch 643s copying input and verified output files 643s running nwchem (/usr/bin/nwchem) with 1 processors 643s 644s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 644s OK 644s 644s Running tests/h2o_dk/h2o_dk 644s 644s cleaning scratch 644s copying input and verified output files 644s running nwchem (/usr/bin/nwchem) with 1 processors 644s 651s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 651s OK 651s 651s Running tests/cosmo_h2o/cosmo_h2o 651s 651s cleaning scratch 651s copying input and verified output files 651s running nwchem (/usr/bin/nwchem) with 1 processors 651s 653s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 653s OK 653s 653s Running tests/ch5n_nbo/ch5n_nbo 653s 653s cleaning scratch 653s copying input and verified output files 653s running nwchem (/usr/bin/nwchem) with 1 processors 653s 654s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 654s OK 654s 654s Running tests/h2s_finite/h2s_finite 654s 654s cleaning scratch 654s copying input and verified output files 654s running nwchem (/usr/bin/nwchem) with 1 processors 654s 660s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 660s OK 660s 660s Running tests/pyqa3/pyqa3 660s 660s cleaning scratch 660s copying input and verified output files 660s running nwchem (/usr/bin/nwchem) with 1 processors 660s 664s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 664s OK 664s 664s Running tests/startag/startag 664s 664s cleaning scratch 664s copying input and verified output files 664s running nwchem (/usr/bin/nwchem) with 1 processors 664s 666s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 666s OK 666s 666s Running tests/esp/esp 666s 666s cleaning scratch 666s copying input and verified output files 666s running nwchem (/usr/bin/nwchem) with 1 processors 666s 669s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 669s ESP charges match 669s 669s 669s Running tests/esp_uhf/esp_uhf 669s 669s cleaning scratch 669s copying input and verified output files 669s running nwchem (/usr/bin/nwchem) with 1 processors 669s 673s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 673s ESP charges match 673s 673s 673s Running tests/dft_bsse/dft_bsse 673s 673s cleaning scratch 673s copying input and verified output files 673s running nwchem (/usr/bin/nwchem) with 1 processors 673s 679s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 679s OK 679s 679s Running tests/dplot_dft/dplot_dft 679s 679s cleaning scratch 679s copying input and verified output files 679s running nwchem (/usr/bin/nwchem) with 1 processors 679s 681s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 681s OK 681s 681s Running tests/dft_meta/dft_meta 681s 681s cleaning scratch 681s copying input and verified output files 681s running nwchem (/usr/bin/nwchem) with 1 processors 681s 753s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 753s OK 753s 753s Running tests/dft_mpwb1khf/dft_mpwb1khf 753s 753s cleaning scratch 753s copying input and verified output files 753s running nwchem (/usr/bin/nwchem) with 1 processors 753s 758s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 758s OK 758s 758s Running tests/prop_uhf_h2o/prop_uhf_h2o 758s 758s cleaning scratch 758s copying input and verified output files 758s running nwchem (/usr/bin/nwchem) with 1 processors 758s 781s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 781s OK 781s 781s Running tests/et_zn_dimer/et_zn_dimer 781s 781s cleaning scratch 781s copying input and verified output files 781s running nwchem (/usr/bin/nwchem) with 1 processors 781s 806s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 806s OK 806s 806s Running tests/vectors_rotate/vectors_rotate 806s 806s cleaning scratch 806s copying input and verified output files 806s running nwchem (/usr/bin/nwchem) with 1 processors 806s 809s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 809s OK 809s 809s Running tests/sad_ch3hf/sad_ch3hf 809s 809s cleaning scratch 809s copying input and verified output files 809s running nwchem (/usr/bin/nwchem) with 1 processors 809s 826s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 826s OK 826s 826s Running tests/band/band 826s 826s cleaning scratch 826s copying input and verified output files 826s running nwchem (/usr/bin/nwchem) with 1 processors 826s 837s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 837s OK 837s 837s Running tests/pspw/pspw 837s 837s cleaning scratch 837s copying input and verified output files 837s running nwchem (/usr/bin/nwchem) with 1 processors 837s 861s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 861s OK 861s 861s Running tests/pspw_stress/pspw_stress 861s 861s cleaning scratch 861s copying input and verified output files 861s running nwchem (/usr/bin/nwchem) with 1 processors 861s 890s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 890s OK 890s 890s Running tests/mcscf_ch2/mcscf_ch2 890s 890s cleaning scratch 890s copying input and verified output files 890s running nwchem (/usr/bin/nwchem) with 1 processors 890s 922s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 922s OK 923s 923s Running tests/dft_li2freq/dft_li2freq 923s 923s cleaning scratch 923s copying input and verified output files 923s running nwchem (/usr/bin/nwchem) with 1 processors 923s 1000s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1000s OK 1000s 1000s Running tests/n2_ccsd/n2_ccsd 1000s 1000s cleaning scratch 1000s copying input and verified output files 1000s running nwchem (/usr/bin/nwchem) with 1 processors 1000s 1061s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1061s OK 1061s 1061s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 1061s 1061s cleaning scratch 1061s copying input and verified output files 1061s running nwchem (/usr/bin/nwchem) with 1 processors 1061s 1066s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1066s OK 1066s 1066s Running tests/tddft_h2o/tddft_h2o 1066s 1066s cleaning scratch 1066s copying input and verified output files 1066s running nwchem (/usr/bin/nwchem) with 1 processors 1066s 1114s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1114s OK 1114s 1114s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 1114s 1114s cleaning scratch 1114s copying input and verified output files 1114s running nwchem (/usr/bin/nwchem) with 1 processors 1114s 1491s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1491s OK 1491s 1491s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 1491s 1491s cleaning scratch 1491s copying input and verified output files 1491s running nwchem (/usr/bin/nwchem) with 1 processors 1491s 1511s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1511s OK 1511s 1511s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 1511s 1511s cleaning scratch 1511s copying input and verified output files 1511s running nwchem (/usr/bin/nwchem) with 1 processors 1511s 1516s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1516s OK 1516s 1516s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 1516s 1516s cleaning scratch 1516s copying input and verified output files 1516s running nwchem (/usr/bin/nwchem) with 1 processors 1516s 1628s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1628s OK 1628s 1628s Running tests/mp2_scs_n2/mp2_scs_n2 1628s 1628s cleaning scratch 1628s copying input and verified output files 1628s running nwchem (/usr/bin/nwchem) with 1 processors 1628s 1657s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1657s OK 1657s 1657s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 1657s 1657s cleaning scratch 1657s copying input and verified output files 1657s running nwchem (/usr/bin/nwchem) with 1 processors 1657s 1716s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1716s OK 1716s 1716s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 1716s 1716s cleaning scratch 1716s copying input and verified output files 1716s running nwchem (/usr/bin/nwchem) with 1 processors 1716s 1734s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1734s OK 1734s 1734s Running tests/water/water_md 1734s 1734s cleaning scratch 1734s copying input and verified output files 1734s running nwchem (/usr/bin/nwchem) with 1 processors 1734s 1734s verifying nwout ...... skipped 1734s verifying test ....... completed 1734s 1734s Running tests/water/water_pme 1734s 1734s cleaning scratch 1734s copying input and verified output files 1734s running nwchem (/usr/bin/nwchem) with 1 processors 1734s 1735s verifying nwout ...... skipped 1735s verifying test ....... completed 1735s 1735s OK 1735s autopkgtest [15:10:00]: test testsuite.sh: -----------------------] 1739s autopkgtest [15:10:04]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 1739s testsuite.sh PASS 1743s autopkgtest [15:10:08]: test testsuite-mpich: preparing testbed 1768s autopkgtest [15:10:33]: testbed dpkg architecture: armhf 1770s autopkgtest [15:10:35]: testbed apt version: 2.9.33 1773s autopkgtest [15:10:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1775s autopkgtest [15:10:40]: testbed release detected to be: plucky 1783s autopkgtest [15:10:48]: updating testbed package index (apt update) 1785s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 1785s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 1786s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 1786s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 1786s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 1786s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB] 1787s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB] 1787s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [81.0 kB] 1787s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1944 B] 1787s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 1787s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [326 kB] 1787s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [12.1 kB] 1787s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 1787s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [332 B] 1787s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1400 kB] 1789s Get:16 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 1789s Get:17 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 1812s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 1813s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 1813s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 1813s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 1830s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 1832s Fetched 41.0 MB in 47s (877 kB/s) 1833s Reading package lists... 1839s autopkgtest [15:11:44]: upgrading testbed (apt dist-upgrade and autopurge) 1841s Reading package lists... 1841s Building dependency tree... 1841s Reading state information... 1841s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1841s Starting 2 pkgProblemResolver with broken count: 0 1841s Done 1842s Entering ResolveByKeep 1842s 1843s Calculating upgrade... 1843s The following packages will be upgraded: 1843s libc-bin libc6 locales python3-jinja2 sos strace 1843s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1843s Need to get 8642 kB of archives. 1843s After this operation, 23.6 kB of additional disk space will be used. 1843s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc6 armhf 2.41-1ubuntu2 [2932 kB] 1847s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf libc-bin armhf 2.41-1ubuntu2 [545 kB] 1847s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf locales all 2.41-1ubuntu2 [4246 kB] 1851s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 1852s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 1852s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 1852s Preconfiguring packages ... 1853s Fetched 8642 kB in 9s (977 kB/s) 1853s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 1853s Preparing to unpack .../libc6_2.41-1ubuntu2_armhf.deb ... 1853s Unpacking libc6:armhf (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1853s Setting up libc6:armhf (2.41-1ubuntu2) ... 1853s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 1853s Preparing to unpack .../libc-bin_2.41-1ubuntu2_armhf.deb ... 1853s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1853s Setting up libc-bin (2.41-1ubuntu2) ... 1854s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 1854s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 1854s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 1854s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 1854s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 1854s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 1854s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 1854s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 1854s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 1854s Setting up sos (4.9.0-5) ... 1855s Setting up locales (2.41-1ubuntu2) ... 1856s Generating locales (this might take a while)... 1857s en_US.UTF-8... done 1857s Generation complete. 1857s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 1858s Setting up strace (6.13+ds-1ubuntu1) ... 1858s Processing triggers for man-db (2.13.0-1) ... 1859s Processing triggers for systemd (257.3-1ubuntu3) ... 1862s Reading package lists... 1862s Building dependency tree... 1862s Reading state information... 1863s Starting pkgProblemResolver with broken count: 0 1863s Starting 2 pkgProblemResolver with broken count: 0 1863s Done 1863s Solving dependencies... 1864s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1866s autopkgtest [15:12:11]: rebooting testbed after setup commands that affected boot 1935s Reading package lists... 1935s Building dependency tree... 1935s Reading state information... 1935s Starting pkgProblemResolver with broken count: 0 1936s Starting 2 pkgProblemResolver with broken count: 0 1936s Done 1936s The following NEW packages will be installed: 1936s hwloc-nox libblas3 libgfortran5 libhwloc15 liblapack3 libmpich12 1936s libpython3.13 libscalapack-mpich2.2 libslurm42t64 mpi-default-bin mpich 1936s nwchem-data nwchem-mpich 1937s 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. 1937s Need to get 26.9 MB of archives. 1937s After this operation, 113 MB of additional disk space will be used. 1937s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 1937s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 1937s Get:3 http://ftpmaster.internal/ubuntu plucky/universe armhf libhwloc15 armhf 2.12.0-1 [147 kB] 1937s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 1939s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libpython3.13 armhf 3.13.2-2 [2079 kB] 1941s Get:6 http://ftpmaster.internal/ubuntu plucky/universe armhf hwloc-nox armhf 2.12.0-1 [213 kB] 1941s Get:7 http://ftpmaster.internal/ubuntu plucky/universe armhf libmpich12 armhf 4.2.1-5 [1574 kB] 1942s Get:8 http://ftpmaster.internal/ubuntu plucky/universe armhf libslurm42t64 armhf 24.11.1-1 [769 kB] 1943s Get:9 http://ftpmaster.internal/ubuntu plucky/universe armhf mpich armhf 4.2.1-5 [214 kB] 1943s Get:10 http://ftpmaster.internal/ubuntu plucky/universe armhf mpi-default-bin armhf 1.18 [2504 B] 1943s Get:11 http://ftpmaster.internal/ubuntu plucky/universe armhf libscalapack-mpich2.2 armhf 2.2.2-1ubuntu1 [1464 kB] 1944s Get:12 http://ftpmaster.internal/ubuntu plucky/universe armhf nwchem-data all 7.2.3-7build1 [6076 kB] 1949s Get:13 http://ftpmaster.internal/ubuntu plucky/universe armhf nwchem-mpich armhf 7.2.3-7build1 [11.8 MB] 1960s Fetched 26.9 MB in 23s (1174 kB/s) 1960s Selecting previously unselected package libblas3:armhf. 1960s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 1960s Preparing to unpack .../00-libblas3_3.12.1-2_armhf.deb ... 1960s Unpacking libblas3:armhf (3.12.1-2) ... 1960s Selecting previously unselected package libgfortran5:armhf. 1960s Preparing to unpack .../01-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 1960s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 1960s Selecting previously unselected package libhwloc15:armhf. 1960s Preparing to unpack .../02-libhwloc15_2.12.0-1_armhf.deb ... 1960s Unpacking libhwloc15:armhf (2.12.0-1) ... 1960s Selecting previously unselected package liblapack3:armhf. 1960s Preparing to unpack .../03-liblapack3_3.12.1-2_armhf.deb ... 1960s Unpacking liblapack3:armhf (3.12.1-2) ... 1960s Selecting previously unselected package libpython3.13:armhf. 1960s Preparing to unpack .../04-libpython3.13_3.13.2-2_armhf.deb ... 1960s Unpacking libpython3.13:armhf (3.13.2-2) ... 1960s Selecting previously unselected package hwloc-nox. 1960s Preparing to unpack .../05-hwloc-nox_2.12.0-1_armhf.deb ... 1960s Unpacking hwloc-nox (2.12.0-1) ... 1960s Selecting previously unselected package libmpich12:armhf. 1960s Preparing to unpack .../06-libmpich12_4.2.1-5_armhf.deb ... 1960s Unpacking libmpich12:armhf (4.2.1-5) ... 1960s Selecting previously unselected package libslurm42t64. 1960s Preparing to unpack .../07-libslurm42t64_24.11.1-1_armhf.deb ... 1960s Unpacking libslurm42t64 (24.11.1-1) ... 1960s Selecting previously unselected package mpich. 1960s Preparing to unpack .../08-mpich_4.2.1-5_armhf.deb ... 1960s Unpacking mpich (4.2.1-5) ... 1960s Selecting previously unselected package mpi-default-bin. 1960s Preparing to unpack .../09-mpi-default-bin_1.18_armhf.deb ... 1960s Unpacking mpi-default-bin (1.18) ... 1960s Selecting previously unselected package libscalapack-mpich2.2:armhf. 1960s Preparing to unpack .../10-libscalapack-mpich2.2_2.2.2-1ubuntu1_armhf.deb ... 1960s Unpacking libscalapack-mpich2.2:armhf (2.2.2-1ubuntu1) ... 1960s Selecting previously unselected package nwchem-data. 1960s Preparing to unpack .../11-nwchem-data_7.2.3-7build1_all.deb ... 1960s Unpacking nwchem-data (7.2.3-7build1) ... 1961s Selecting previously unselected package nwchem-mpich. 1961s Preparing to unpack .../12-nwchem-mpich_7.2.3-7build1_armhf.deb ... 1961s Unpacking nwchem-mpich (7.2.3-7build1) ... 1961s Setting up libpython3.13:armhf (3.13.2-2) ... 1961s Setting up nwchem-data (7.2.3-7build1) ... 1961s Setting up libblas3:armhf (3.12.1-2) ... 1961s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 1961s Setting up libslurm42t64 (24.11.1-1) ... 1961s Setting up libhwloc15:armhf (2.12.0-1) ... 1961s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 1961s Setting up libmpich12:armhf (4.2.1-5) ... 1961s Setting up liblapack3:armhf (3.12.1-2) ... 1961s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 1961s Setting up hwloc-nox (2.12.0-1) ... 1961s Setting up mpich (4.2.1-5) ... 1961s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 1961s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 1961s Setting up mpi-default-bin (1.18) ... 1961s Setting up libscalapack-mpich2.2:armhf (2.2.2-1ubuntu1) ... 1961s Setting up nwchem-mpich (7.2.3-7build1) ... 1961s Processing triggers for libc-bin (2.41-1ubuntu2) ... 1961s Processing triggers for man-db (2.13.0-1) ... 2157s autopkgtest [15:17:02]: test testsuite-mpich: [----------------------- 2160s ===== TESTING NWCHEM BUILD FOR mpich ===== 2160s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 2160s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 2160s skipping extra tests on armhf 2160s 2160s 2160s Running tests/dft_he2+/dft_he2+ 2160s 2160s cleaning scratch 2160s copying input and verified output files 2160s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2160s 2175s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2175s OK 2175s 2175s Running tests/qmmm_grad0/qmmm_grad0 2175s 2175s cleaning scratch 2175s copying input and verified output files 2175s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2175s 2181s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2181s OK 2181s 2181s Running tests/auh2o/auh2o 2181s 2181s cleaning scratch 2181s copying input and verified output files 2181s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2181s 2184s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2184s OK 2184s 2184s Running tests/autosym/autosym 2184s 2184s cleaning scratch 2184s copying input and verified output files 2184s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2184s 2197s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2197s OK 2197s 2197s Running tests/h2mp2/h2mp2 2197s 2197s cleaning scratch 2197s copying input and verified output files 2197s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2197s 2201s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2201s OK 2201s 2201s Running tests/h2o/h2o 2201s 2201s cleaning scratch 2201s copying input and verified output files 2201s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2201s 2202s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2202s OK 2202s 2202s Running tests/hess_h2o/hess_h2o 2202s 2202s cleaning scratch 2202s copying input and verified output files 2202s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2202s 2210s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2210s OK 2210s 2210s Running tests/prop_h2o/prop_h2o 2210s 2210s cleaning scratch 2210s copying input and verified output files 2210s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2210s 2215s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2215s OK 2215s 2215s Running tests/geom_zmatrix/geom_zmatrix 2215s 2215s cleaning scratch 2215s copying input and verified output files 2215s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2215s 2221s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2221s OK 2221s 2221s Running tests/rimp2_ne/rimp2_ne 2221s 2221s cleaning scratch 2221s copying input and verified output files 2221s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2221s 2225s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2225s OK 2225s 2225s Running tests/small_intchk/small_intchk 2225s 2225s cleaning scratch 2225s copying input and verified output files 2225s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2225s 2235s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2235s OK 2235s 2235s Running tests/tagcheck/tagcheck 2235s 2235s cleaning scratch 2235s copying input and verified output files 2235s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2235s 2239s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2239s OK 2239s 2239s Running tests/testtab/testtab 2239s 2239s cleaning scratch 2239s copying input and verified output files 2239s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2239s 2240s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2240s OK 2240s 2240s Running tests/h2o_dk/h2o_dk 2240s 2240s cleaning scratch 2240s copying input and verified output files 2240s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2240s 2248s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2248s OK 2248s 2248s Running tests/cosmo_h2o/cosmo_h2o 2248s 2248s cleaning scratch 2248s copying input and verified output files 2248s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2248s 2251s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2252s OK 2252s 2252s Running tests/ch5n_nbo/ch5n_nbo 2252s 2252s cleaning scratch 2252s copying input and verified output files 2252s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2252s 2252s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2252s OK 2252s 2252s Running tests/h2s_finite/h2s_finite 2252s 2252s cleaning scratch 2252s copying input and verified output files 2252s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2252s 2258s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2258s OK 2258s 2258s Running tests/pyqa3/pyqa3 2258s 2258s cleaning scratch 2258s copying input and verified output files 2258s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2258s 2263s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2263s OK 2263s 2263s Running tests/startag/startag 2263s 2263s cleaning scratch 2263s copying input and verified output files 2263s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2263s 2265s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2265s OK 2265s 2265s Running tests/esp/esp 2265s 2265s cleaning scratch 2265s copying input and verified output files 2265s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2265s 2269s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2269s ESP charges match 2269s 2269s 2269s Running tests/esp_uhf/esp_uhf 2269s 2269s cleaning scratch 2269s copying input and verified output files 2269s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2269s 2273s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2273s ESP charges match 2273s 2273s 2273s Running tests/dft_bsse/dft_bsse 2273s 2273s cleaning scratch 2273s copying input and verified output files 2273s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2273s 2280s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2280s OK 2280s 2280s Running tests/dplot_dft/dplot_dft 2280s 2280s cleaning scratch 2280s copying input and verified output files 2280s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2280s 2282s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2282s OK 2282s 2282s Running tests/dft_meta/dft_meta 2282s 2282s cleaning scratch 2282s copying input and verified output files 2282s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2282s 2367s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2367s OK 2367s 2367s Running tests/dft_mpwb1khf/dft_mpwb1khf 2367s 2367s cleaning scratch 2367s copying input and verified output files 2367s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2367s 2372s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2372s OK 2372s 2372s Running tests/prop_uhf_h2o/prop_uhf_h2o 2372s 2372s cleaning scratch 2372s copying input and verified output files 2372s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2372s 2400s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2400s OK 2400s 2400s Running tests/et_zn_dimer/et_zn_dimer 2400s 2400s cleaning scratch 2400s copying input and verified output files 2400s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2400s 2427s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2427s OK 2427s 2427s Running tests/vectors_rotate/vectors_rotate 2427s 2427s cleaning scratch 2427s copying input and verified output files 2427s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2427s 2431s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2431s OK 2431s 2431s Running tests/sad_ch3hf/sad_ch3hf 2431s 2431s cleaning scratch 2431s copying input and verified output files 2431s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2431s 2450s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2450s OK 2450s 2450s Running tests/band/band 2450s 2450s cleaning scratch 2450s copying input and verified output files 2450s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2450s 2463s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2463s OK 2463s 2463s Running tests/pspw/pspw 2463s 2463s cleaning scratch 2463s copying input and verified output files 2463s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2463s 2487s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2487s OK 2487s 2487s Running tests/pspw_stress/pspw_stress 2487s 2487s cleaning scratch 2487s copying input and verified output files 2487s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2487s 2516s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2516s OK 2516s 2516s Running tests/mcscf_ch2/mcscf_ch2 2516s 2516s cleaning scratch 2516s copying input and verified output files 2516s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2516s 2549s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2549s OK 2549s 2549s Running tests/dft_li2freq/dft_li2freq 2549s 2549s cleaning scratch 2549s copying input and verified output files 2549s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2549s 2634s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2634s OK 2634s 2634s Running tests/n2_ccsd/n2_ccsd 2634s 2634s cleaning scratch 2634s copying input and verified output files 2634s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2634s 2695s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2695s OK 2695s 2695s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 2695s 2695s cleaning scratch 2695s copying input and verified output files 2695s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2695s 2700s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2700s OK 2700s 2700s Running tests/tddft_h2o/tddft_h2o 2700s 2700s cleaning scratch 2700s copying input and verified output files 2700s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2700s 2748s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2748s OK 2748s 2748s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 2748s 2748s cleaning scratch 2748s copying input and verified output files 2748s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2748s 3149s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3149s OK 3149s 3149s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 3149s 3149s cleaning scratch 3149s copying input and verified output files 3149s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3149s 3175s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3175s OK 3175s 3175s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 3175s 3175s cleaning scratch 3175s copying input and verified output files 3175s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3175s 3182s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3182s OK 3182s 3182s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 3182s 3182s cleaning scratch 3182s copying input and verified output files 3182s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3182s 3315s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3315s OK 3315s 3315s Running tests/mp2_scs_n2/mp2_scs_n2 3315s 3315s cleaning scratch 3315s copying input and verified output files 3315s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3315s 3349s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3349s OK 3349s 3349s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 3349s 3349s cleaning scratch 3349s copying input and verified output files 3349s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3349s 3420s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3420s OK 3420s 3420s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 3420s 3420s cleaning scratch 3420s copying input and verified output files 3421s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3421s 3441s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3441s OK 3441s 3441s Running tests/water/water_md 3441s 3441s cleaning scratch 3441s copying input and verified output files 3441s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3441s 3442s verifying nwout ...... skipped 3442s verifying test ....... completed 3442s 3442s Running tests/water/water_pme 3442s 3442s cleaning scratch 3442s copying input and verified output files 3442s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3442s 3442s verifying nwout ...... skipped 3442s verifying test ....... completed 3442s 3442s OK 3442s autopkgtest [15:38:27]: test testsuite-mpich: -----------------------] 3446s testsuite-mpich PASS 3446s autopkgtest [15:38:31]: test testsuite-mpich: - - - - - - - - - - results - - - - - - - - - - 3450s autopkgtest [15:38:35]: @@@@@@@@@@@@@@@@@@@@ summary 3450s testsuite-openmpi SKIP Test declares architecture as not supported: armhf 3450s testsuite-openmpi SKIP Test declares architecture as not supported: armhf 3450s testsuite.sh PASS 3450s testsuite-mpich PASS