0s autopkgtest [16:13:00]: starting date and time: 2025-03-15 16:13:00+0000 0s autopkgtest [16:13:00]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [16:13:00]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.95vo9i89/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:texlive-base --apt-upgrade nanook --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=texlive-base/2024.20250309-1 -- lxd -r lxd-armhf-10.145.243.229 lxd-armhf-10.145.243.229:autopkgtest/ubuntu/plucky/armhf 26s autopkgtest [16:13:26]: testbed dpkg architecture: armhf 29s autopkgtest [16:13:29]: testbed apt version: 2.9.33 33s autopkgtest [16:13:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 35s autopkgtest [16:13:35]: testbed release detected to be: None 42s autopkgtest [16:13:42]: updating testbed package index (apt update) 44s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 45s Get:2 http://ftpmaster.internal/ubuntu plucky InRelease [257 kB] 45s Get:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease [126 kB] 45s Get:4 http://ftpmaster.internal/ubuntu plucky-security InRelease [126 kB] 46s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 46s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 46s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 46s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf Packages [114 kB] 46s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main armhf c-n-f Metadata [1832 B] 46s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted armhf c-n-f Metadata [116 B] 46s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf Packages [312 kB] 47s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf c-n-f Metadata [11.1 kB] 47s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf Packages [3472 B] 47s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse armhf c-n-f Metadata [240 B] 47s Get:15 http://ftpmaster.internal/ubuntu plucky/main Sources [1394 kB] 48s Get:16 http://ftpmaster.internal/ubuntu plucky/universe Sources [21.0 MB] 70s Get:17 http://ftpmaster.internal/ubuntu plucky/multiverse Sources [299 kB] 71s Get:18 http://ftpmaster.internal/ubuntu plucky/main armhf Packages [1378 kB] 72s Get:19 http://ftpmaster.internal/ubuntu plucky/main armhf c-n-f Metadata [29.4 kB] 72s Get:20 http://ftpmaster.internal/ubuntu plucky/restricted armhf c-n-f Metadata [108 B] 72s Get:21 http://ftpmaster.internal/ubuntu plucky/universe armhf Packages [15.1 MB] 88s Get:22 http://ftpmaster.internal/ubuntu plucky/multiverse armhf Packages [172 kB] 90s Fetched 41.0 MB in 46s (899 kB/s) 91s Reading package lists... 97s autopkgtest [16:14:37]: upgrading testbed (apt dist-upgrade and autopurge) 98s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 99s Starting 2 pkgProblemResolver with broken count: 0 99s Done 100s Entering ResolveByKeep 101s 101s Calculating upgrade... 101s The following packages will be upgraded: 101s pinentry-curses python3-jinja2 sos strace 101s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Need to get 960 kB of archives. 101s After this operation, 23.6 kB of additional disk space will be used. 101s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf strace armhf 6.13+ds-1ubuntu1 [445 kB] 102s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf pinentry-curses armhf 1.3.1-2ubuntu3 [40.6 kB] 102s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 102s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf sos all 4.9.0-5 [365 kB] 103s Fetched 960 kB in 2s (613 kB/s) 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 104s Preparing to unpack .../strace_6.13+ds-1ubuntu1_armhf.deb ... 104s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 104s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_armhf.deb ... 104s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 104s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 104s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 104s Preparing to unpack .../archives/sos_4.9.0-5_all.deb ... 104s Unpacking sos (4.9.0-5) over (4.9.0-4) ... 105s Setting up sos (4.9.0-5) ... 105s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 105s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 106s Setting up strace (6.13+ds-1ubuntu1) ... 106s Processing triggers for man-db (2.13.0-1) ... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s Starting pkgProblemResolver with broken count: 0 111s Starting 2 pkgProblemResolver with broken count: 0 111s Done 112s Solving dependencies... 113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s autopkgtest [16:14:55]: rebooting testbed after setup commands that affected boot 155s autopkgtest [16:15:35]: testbed running kernel: Linux 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 18:10:51 UTC 2 179s autopkgtest [16:15:59]: @@@@@@@@@@@@@@@@@@@@ apt-source nanook 195s Get:1 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (dsc) [2220 B] 195s Get:2 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (tar) [95.2 kB] 195s Get:3 http://ftpmaster.internal/ubuntu plucky/universe nanook 1.33+dfsg-6 (diff) [1818 kB] 195s gpgv: Signature made Wed Dec 18 14:21:48 2024 UTC 195s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 195s gpgv: issuer "emollier@debian.org" 195s gpgv: Can't check signature: No public key 195s dpkg-source: warning: cannot verify inline signature for ./nanook_1.33+dfsg-6.dsc: no acceptable signature found 195s autopkgtest [16:16:15]: testing package nanook version 1.33+dfsg-6 197s autopkgtest [16:16:17]: build not needed 200s autopkgtest [16:16:20]: test run-unit-test: preparing testbed 202s Reading package lists... 202s Building dependency tree... 202s Reading state information... 203s Starting pkgProblemResolver with broken count: 0 204s Starting 2 pkgProblemResolver with broken count: 0 204s Done 206s The following NEW packages will be installed: 206s ca-certificates-java default-jre-headless fontconfig fontconfig-config 206s fonts-dejavu-core fonts-dejavu-mono fonts-lmodern hdf5-tools java-common 206s last-align libaec0 libapache-pom-java libblas3 libcairo2 libcommons-io-java 206s libcommons-parent-java libdatrie1 libdeflate0 libfontconfig1 libfreetype6 206s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-310 206s libhdf5-hl-310 libice6 libjbig0 libjpeg-turbo8 libjpeg8 libkpathsea6 206s liblapack3 liblcms2-2 liblerc4 libmpfi0 libpango-1.0-0 libpangocairo-1.0-0 206s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcsclite1 libpixman-1-0 206s libpotrace0 libptexenc1 libsharpyuv0 libsm6 libsynctex2 libsz2 libtcl8.6 206s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 206s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 206s libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler nanook nanook-examples 206s openjdk-21-jre-headless r-base-core r-cran-cli r-cran-colorspace 206s r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra 206s r-cran-gtable r-cran-isoband r-cran-labeling r-cran-lattice r-cran-lifecycle 206s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv 206s r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten 206s r-cran-plyr r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape 206s r-cran-rlang r-cran-scales r-cran-tibble r-cran-utf8 r-cran-vctrs 206s r-cran-viridislite r-cran-withr t1utils tex-common texlive-base 206s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 206s 0 upgraded, 115 newly installed, 0 to remove and 0 not upgraded. 206s Need to get 153 MB of archives. 206s After this operation, 430 MB of additional disk space will be used. 206s Get:1 http://ftpmaster.internal/ubuntu plucky/main armhf ca-certificates-java all 20240118 [11.6 kB] 206s Get:2 http://ftpmaster.internal/ubuntu plucky/main armhf java-common all 0.76 [6852 B] 206s Get:3 http://ftpmaster.internal/ubuntu plucky/main armhf liblcms2-2 armhf 2.16-2 [137 kB] 206s Get:4 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg-turbo8 armhf 2.1.5-3ubuntu2 [127 kB] 206s Get:5 http://ftpmaster.internal/ubuntu plucky/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 206s Get:6 http://ftpmaster.internal/ubuntu plucky/main armhf libpcsclite1 armhf 2.3.1-1 [24.9 kB] 206s Get:7 http://ftpmaster.internal/ubuntu plucky/main armhf openjdk-21-jre-headless armhf 21.0.6+7-1 [39.7 MB] 247s Get:8 http://ftpmaster.internal/ubuntu plucky/main armhf default-jre-headless armhf 2:1.21-76 [3182 B] 247s Get:9 http://ftpmaster.internal/ubuntu plucky/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [330 kB] 247s Get:10 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 248s Get:11 http://ftpmaster.internal/ubuntu plucky/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 249s Get:12 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig-config armhf 2.15.0-2ubuntu1 [37.5 kB] 249s Get:13 http://ftpmaster.internal/ubuntu plucky/main armhf libfontconfig1 armhf 2.15.0-2ubuntu1 [114 kB] 249s Get:14 http://ftpmaster.internal/ubuntu plucky/main armhf fontconfig armhf 2.15.0-2ubuntu1 [190 kB] 249s Get:15 http://ftpmaster.internal/ubuntu plucky/universe armhf fonts-lmodern all 2.005-1 [4799 kB] 254s Get:16 http://ftpmaster.internal/ubuntu plucky/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 254s Get:17 http://ftpmaster.internal/ubuntu plucky/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 254s Get:18 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-310 armhf 1.14.5+repack-3 [1410 kB] 256s Get:19 http://ftpmaster.internal/ubuntu plucky/universe armhf libhdf5-hl-310 armhf 1.14.5+repack-3 [58.8 kB] 256s Get:20 http://ftpmaster.internal/ubuntu plucky/universe armhf hdf5-tools armhf 1.14.5+repack-3 [510 kB] 257s Get:21 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf last-align armhf 1608-1 [809 kB] 257s Get:22 http://ftpmaster.internal/ubuntu plucky/universe armhf libapache-pom-java all 33-2 [5874 B] 258s Get:23 http://ftpmaster.internal/ubuntu plucky/main armhf libblas3 armhf 3.12.1-2 [132 kB] 258s Get:24 http://ftpmaster.internal/ubuntu plucky/main armhf libpixman-1-0 armhf 0.44.0-3 [183 kB] 258s Get:25 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 258s Get:26 http://ftpmaster.internal/ubuntu plucky/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 258s Get:27 http://ftpmaster.internal/ubuntu plucky/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 258s Get:28 http://ftpmaster.internal/ubuntu plucky/main armhf libcairo2 armhf 1.18.2-2 [484 kB] 259s Get:29 http://ftpmaster.internal/ubuntu plucky/universe armhf libcommons-parent-java all 56-1 [10.7 kB] 259s Get:30 http://ftpmaster.internal/ubuntu plucky/universe armhf libcommons-io-java all 2.18.0-1 [477 kB] 260s Get:31 http://ftpmaster.internal/ubuntu plucky/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 260s Get:32 http://ftpmaster.internal/ubuntu plucky/main armhf libdeflate0 armhf 1.23-1 [38.5 kB] 260s Get:33 http://ftpmaster.internal/ubuntu plucky/main armhf libgfortran5 armhf 15-20250222-0ubuntu1 [330 kB] 260s Get:34 http://ftpmaster.internal/ubuntu plucky/main armhf libgomp1 armhf 15-20250222-0ubuntu1 [128 kB] 261s Get:35 http://ftpmaster.internal/ubuntu plucky/main armhf libgraphite2-3 armhf 1.3.14-2ubuntu1 [64.8 kB] 261s Get:36 http://ftpmaster.internal/ubuntu plucky/main armhf libharfbuzz0b armhf 10.2.0-1 [464 kB] 261s Get:37 http://ftpmaster.internal/ubuntu plucky/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 262s Get:38 http://ftpmaster.internal/ubuntu plucky/main armhf libice6 armhf 2:1.1.1-1 [36.5 kB] 262s Get:39 http://ftpmaster.internal/ubuntu plucky/main armhf libkpathsea6 armhf 2024.20240313.70630+ds-5build2 [58.9 kB] 262s Get:40 http://ftpmaster.internal/ubuntu plucky/main armhf liblapack3 armhf 3.12.1-2 [2091 kB] 264s Get:41 http://ftpmaster.internal/ubuntu plucky/main armhf liblerc4 armhf 4.0.0+ds-5ubuntu1 [160 kB] 264s Get:42 http://ftpmaster.internal/ubuntu plucky/universe armhf libmpfi0 armhf 1.5.4+ds-4 [28.0 kB] 264s Get:43 http://ftpmaster.internal/ubuntu plucky/main armhf libthai-data all 0.1.29-2build1 [158 kB] 265s Get:44 http://ftpmaster.internal/ubuntu plucky/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 265s Get:45 http://ftpmaster.internal/ubuntu plucky/main armhf libpango-1.0-0 armhf 1.56.2-1 [216 kB] 265s Get:46 http://ftpmaster.internal/ubuntu plucky/main armhf libpangoft2-1.0-0 armhf 1.56.2-1 [43.6 kB] 265s Get:47 http://ftpmaster.internal/ubuntu plucky/main armhf libpangocairo-1.0-0 armhf 1.56.2-1 [25.1 kB] 265s Get:48 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper2 armhf 2.2.5-0.3 [16.3 kB] 265s Get:49 http://ftpmaster.internal/ubuntu plucky/main armhf libpaper-utils armhf 2.2.5-0.3 [14.2 kB] 265s Get:50 http://ftpmaster.internal/ubuntu plucky/universe armhf libpotrace0 armhf 1.16-2build1 [15.2 kB] 266s Get:51 http://ftpmaster.internal/ubuntu plucky/main armhf libptexenc1 armhf 2024.20240313.70630+ds-5build2 [37.8 kB] 266s Get:52 http://ftpmaster.internal/ubuntu plucky/main armhf libsharpyuv0 armhf 1.5.0-0.1 [16.4 kB] 266s Get:53 http://ftpmaster.internal/ubuntu plucky/main armhf libsm6 armhf 2:1.2.4-1 [15.1 kB] 266s Get:54 http://ftpmaster.internal/ubuntu plucky/main armhf libsynctex2 armhf 2024.20240313.70630+ds-5build2 [48.5 kB] 266s Get:55 http://ftpmaster.internal/ubuntu plucky/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [909 kB] 267s Get:56 http://ftpmaster.internal/ubuntu plucky/universe armhf libteckit0 armhf 2.5.12+ds1-1 [323 kB] 267s Get:57 http://ftpmaster.internal/ubuntu plucky/main armhf libtexlua53-5 armhf 2024.20240313.70630+ds-5build2 [98.4 kB] 268s Get:58 http://ftpmaster.internal/ubuntu plucky/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 268s Get:59 http://ftpmaster.internal/ubuntu plucky/main armhf libwebp7 armhf 1.5.0-0.1 [188 kB] 268s Get:60 http://ftpmaster.internal/ubuntu plucky/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu4 [179 kB] 268s Get:61 http://ftpmaster.internal/ubuntu plucky/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 268s Get:62 http://ftpmaster.internal/ubuntu plucky/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 268s Get:63 http://ftpmaster.internal/ubuntu plucky/main armhf libtk8.6 armhf 8.6.16-1 [686 kB] 269s Get:64 http://ftpmaster.internal/ubuntu plucky/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 269s Get:65 http://ftpmaster.internal/ubuntu plucky/main armhf libxmu6 armhf 2:1.1.3-3build2 [40.4 kB] 269s Get:66 http://ftpmaster.internal/ubuntu plucky/main armhf libxpm4 armhf 1:3.5.17-1build2 [30.1 kB] 270s Get:67 http://ftpmaster.internal/ubuntu plucky/main armhf libxaw7 armhf 2:1.0.16-1 [154 kB] 270s Get:68 http://ftpmaster.internal/ubuntu plucky/main armhf libxi6 armhf 2:1.8.2-1 [26.5 kB] 270s Get:69 http://ftpmaster.internal/ubuntu plucky/universe armhf libzzip-0-13t64 armhf 0.13.78+dfsg.1-0.1 [26.1 kB] 270s Get:70 http://ftpmaster.internal/ubuntu plucky/main armhf zip armhf 3.0-14ubuntu2 [164 kB] 270s Get:71 http://ftpmaster.internal/ubuntu plucky/main armhf unzip armhf 6.0-28ubuntu6 [167 kB] 271s Get:72 http://ftpmaster.internal/ubuntu plucky/main armhf xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 271s Get:73 http://ftpmaster.internal/ubuntu plucky/universe armhf r-base-core armhf 4.4.3-1 [28.2 MB] 296s Get:74 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-littler armhf 0.3.20-2 [90.9 kB] 296s Get:75 http://ftpmaster.internal/ubuntu plucky/universe armhf littler all 0.3.20-2 [2554 B] 296s Get:76 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-cli armhf 3.6.4-1 [1377 kB] 297s Get:77 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-glue armhf 1.8.0-1 [162 kB] 297s Get:78 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rlang armhf 1.1.5-1 [1701 kB] 299s Get:79 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 299s Get:80 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 299s Get:81 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-isoband armhf 0.2.7-1 [1477 kB] 301s Get:82 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mass armhf 7.3-64-1 [1105 kB] 302s Get:83 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 304s Get:84 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-nlme armhf 3.1.167-1 [2306 kB] 306s Get:85 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-matrix armhf 1.7-3-1 [4039 kB] 309s Get:86 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-mgcv armhf 1.9-1-1 [3205 kB] 312s Get:87 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-farver armhf 2.1.2-1 [1355 kB] 313s Get:88 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-labeling all 0.4.3-1 [62.1 kB] 313s Get:89 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-colorspace armhf 2.1-1+dfsg-1 [1561 kB] 315s Get:90 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-munsell all 0.5.1-1 [213 kB] 315s Get:91 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-r6 all 2.6.1-1 [101 kB] 315s Get:92 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 315s Get:93 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] 316s Get:94 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-scales all 1.3.0-1 [603 kB] 317s Get:95 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-fansi armhf 1.0.5-1 [611 kB] 317s Get:96 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] 318s Get:97 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-utf8 armhf 1.2.4-1 [136 kB] 318s Get:98 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-vctrs armhf 0.6.5-1 [1310 kB] 319s Get:99 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 320s Get:100 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 320s Get:101 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-tibble armhf 3.2.1+dfsg-3 [420 kB] 320s Get:102 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-withr all 3.0.2+dfsg-1 [214 kB] 320s Get:103 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 324s Get:104 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] 325s Get:105 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 325s Get:106 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-rcpp armhf 1.0.14-1 [1976 kB] 327s Get:107 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-plyr armhf 1.8.9-1 [832 kB] 328s Get:108 http://ftpmaster.internal/ubuntu plucky/universe armhf r-cran-reshape all 0.8.9-1 [168 kB] 328s Get:109 http://ftpmaster.internal/ubuntu plucky/universe armhf tex-common all 6.19 [29.8 kB] 328s Get:110 http://ftpmaster.internal/ubuntu plucky/main armhf t1utils armhf 1.41-4build3 [51.8 kB] 329s Get:111 http://ftpmaster.internal/ubuntu plucky/universe armhf texlive-binaries armhf 2024.20240313.70630+ds-5build2 [7070 kB] 336s Get:112 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf texlive-base all 2024.20250309-1 [22.7 MB] 356s Get:113 http://ftpmaster.internal/ubuntu plucky-proposed/universe armhf texlive-latex-base all 2024.20250309-1 [1276 kB] 357s Get:114 http://ftpmaster.internal/ubuntu plucky/universe armhf nanook all 1.33+dfsg-6 [195 kB] 358s Get:115 http://ftpmaster.internal/ubuntu plucky/universe armhf nanook-examples all 1.33+dfsg-6 [1814 kB] 360s Preconfiguring packages ... 360s Fetched 153 MB in 2min 33s (998 kB/s) 360s Selecting previously unselected package ca-certificates-java. 360s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64655 files and directories currently installed.) 360s Preparing to unpack .../000-ca-certificates-java_20240118_all.deb ... 360s Unpacking ca-certificates-java (20240118) ... 360s Selecting previously unselected package java-common. 360s Preparing to unpack .../001-java-common_0.76_all.deb ... 360s Unpacking java-common (0.76) ... 360s Selecting previously unselected package liblcms2-2:armhf. 360s Preparing to unpack .../002-liblcms2-2_2.16-2_armhf.deb ... 360s Unpacking liblcms2-2:armhf (2.16-2) ... 360s Selecting previously unselected package libjpeg-turbo8:armhf. 360s Preparing to unpack .../003-libjpeg-turbo8_2.1.5-3ubuntu2_armhf.deb ... 360s Unpacking libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 360s Selecting previously unselected package libjpeg8:armhf. 360s Preparing to unpack .../004-libjpeg8_8c-2ubuntu11_armhf.deb ... 360s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 360s Selecting previously unselected package libpcsclite1:armhf. 360s Preparing to unpack .../005-libpcsclite1_2.3.1-1_armhf.deb ... 360s Unpacking libpcsclite1:armhf (2.3.1-1) ... 360s Selecting previously unselected package openjdk-21-jre-headless:armhf. 360s Preparing to unpack .../006-openjdk-21-jre-headless_21.0.6+7-1_armhf.deb ... 360s Unpacking openjdk-21-jre-headless:armhf (21.0.6+7-1) ... 362s Selecting previously unselected package default-jre-headless. 362s Preparing to unpack .../007-default-jre-headless_2%3a1.21-76_armhf.deb ... 362s Unpacking default-jre-headless (2:1.21-76) ... 362s Selecting previously unselected package libfreetype6:armhf. 362s Preparing to unpack .../008-libfreetype6_2.13.3+dfsg-1_armhf.deb ... 362s Unpacking libfreetype6:armhf (2.13.3+dfsg-1) ... 362s Selecting previously unselected package fonts-dejavu-mono. 362s Preparing to unpack .../009-fonts-dejavu-mono_2.37-8_all.deb ... 362s Unpacking fonts-dejavu-mono (2.37-8) ... 363s Selecting previously unselected package fonts-dejavu-core. 363s Preparing to unpack .../010-fonts-dejavu-core_2.37-8_all.deb ... 363s Unpacking fonts-dejavu-core (2.37-8) ... 363s Selecting previously unselected package fontconfig-config. 363s Preparing to unpack .../011-fontconfig-config_2.15.0-2ubuntu1_armhf.deb ... 363s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 363s Selecting previously unselected package libfontconfig1:armhf. 363s Preparing to unpack .../012-libfontconfig1_2.15.0-2ubuntu1_armhf.deb ... 363s Unpacking libfontconfig1:armhf (2.15.0-2ubuntu1) ... 363s Selecting previously unselected package fontconfig. 363s Preparing to unpack .../013-fontconfig_2.15.0-2ubuntu1_armhf.deb ... 363s Unpacking fontconfig (2.15.0-2ubuntu1) ... 363s Selecting previously unselected package fonts-lmodern. 363s Preparing to unpack .../014-fonts-lmodern_2.005-1_all.deb ... 363s Unpacking fonts-lmodern (2.005-1) ... 363s Selecting previously unselected package libaec0:armhf. 363s Preparing to unpack .../015-libaec0_1.1.3-1_armhf.deb ... 363s Unpacking libaec0:armhf (1.1.3-1) ... 363s Selecting previously unselected package libsz2:armhf. 363s Preparing to unpack .../016-libsz2_1.1.3-1_armhf.deb ... 363s Unpacking libsz2:armhf (1.1.3-1) ... 364s Selecting previously unselected package libhdf5-310:armhf. 364s Preparing to unpack .../017-libhdf5-310_1.14.5+repack-3_armhf.deb ... 364s Unpacking libhdf5-310:armhf (1.14.5+repack-3) ... 364s Selecting previously unselected package libhdf5-hl-310:armhf. 364s Preparing to unpack .../018-libhdf5-hl-310_1.14.5+repack-3_armhf.deb ... 364s Unpacking libhdf5-hl-310:armhf (1.14.5+repack-3) ... 364s Selecting previously unselected package hdf5-tools. 364s Preparing to unpack .../019-hdf5-tools_1.14.5+repack-3_armhf.deb ... 364s Unpacking hdf5-tools (1.14.5+repack-3) ... 364s Selecting previously unselected package last-align. 364s Preparing to unpack .../020-last-align_1608-1_armhf.deb ... 364s Unpacking last-align (1608-1) ... 364s Selecting previously unselected package libapache-pom-java. 364s Preparing to unpack .../021-libapache-pom-java_33-2_all.deb ... 364s Unpacking libapache-pom-java (33-2) ... 364s Selecting previously unselected package libblas3:armhf. 364s Preparing to unpack .../022-libblas3_3.12.1-2_armhf.deb ... 364s Unpacking libblas3:armhf (3.12.1-2) ... 364s Selecting previously unselected package libpixman-1-0:armhf. 364s Preparing to unpack .../023-libpixman-1-0_0.44.0-3_armhf.deb ... 364s Unpacking libpixman-1-0:armhf (0.44.0-3) ... 364s Selecting previously unselected package libxcb-render0:armhf. 364s Preparing to unpack .../024-libxcb-render0_1.17.0-2_armhf.deb ... 364s Unpacking libxcb-render0:armhf (1.17.0-2) ... 364s Selecting previously unselected package libxcb-shm0:armhf. 364s Preparing to unpack .../025-libxcb-shm0_1.17.0-2_armhf.deb ... 364s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 364s Selecting previously unselected package libxrender1:armhf. 364s Preparing to unpack .../026-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 364s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 364s Selecting previously unselected package libcairo2:armhf. 364s Preparing to unpack .../027-libcairo2_1.18.2-2_armhf.deb ... 364s Unpacking libcairo2:armhf (1.18.2-2) ... 364s Selecting previously unselected package libcommons-parent-java. 364s Preparing to unpack .../028-libcommons-parent-java_56-1_all.deb ... 364s Unpacking libcommons-parent-java (56-1) ... 364s Selecting previously unselected package libcommons-io-java. 364s Preparing to unpack .../029-libcommons-io-java_2.18.0-1_all.deb ... 364s Unpacking libcommons-io-java (2.18.0-1) ... 364s Selecting previously unselected package libdatrie1:armhf. 364s Preparing to unpack .../030-libdatrie1_0.2.13-3build1_armhf.deb ... 364s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 364s Selecting previously unselected package libdeflate0:armhf. 364s Preparing to unpack .../031-libdeflate0_1.23-1_armhf.deb ... 364s Unpacking libdeflate0:armhf (1.23-1) ... 364s Selecting previously unselected package libgfortran5:armhf. 364s Preparing to unpack .../032-libgfortran5_15-20250222-0ubuntu1_armhf.deb ... 364s Unpacking libgfortran5:armhf (15-20250222-0ubuntu1) ... 364s Selecting previously unselected package libgomp1:armhf. 364s Preparing to unpack .../033-libgomp1_15-20250222-0ubuntu1_armhf.deb ... 364s Unpacking libgomp1:armhf (15-20250222-0ubuntu1) ... 364s Selecting previously unselected package libgraphite2-3:armhf. 364s Preparing to unpack .../034-libgraphite2-3_1.3.14-2ubuntu1_armhf.deb ... 364s Unpacking libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 364s Selecting previously unselected package libharfbuzz0b:armhf. 364s Preparing to unpack .../035-libharfbuzz0b_10.2.0-1_armhf.deb ... 364s Unpacking libharfbuzz0b:armhf (10.2.0-1) ... 364s Selecting previously unselected package x11-common. 364s Preparing to unpack .../036-x11-common_1%3a7.7+23ubuntu3_all.deb ... 364s Unpacking x11-common (1:7.7+23ubuntu3) ... 364s Selecting previously unselected package libice6:armhf. 364s Preparing to unpack .../037-libice6_2%3a1.1.1-1_armhf.deb ... 364s Unpacking libice6:armhf (2:1.1.1-1) ... 364s Selecting previously unselected package libkpathsea6:armhf. 364s Preparing to unpack .../038-libkpathsea6_2024.20240313.70630+ds-5build2_armhf.deb ... 364s Unpacking libkpathsea6:armhf (2024.20240313.70630+ds-5build2) ... 365s Selecting previously unselected package liblapack3:armhf. 365s Preparing to unpack .../039-liblapack3_3.12.1-2_armhf.deb ... 365s Unpacking liblapack3:armhf (3.12.1-2) ... 365s Selecting previously unselected package liblerc4:armhf. 365s Preparing to unpack .../040-liblerc4_4.0.0+ds-5ubuntu1_armhf.deb ... 365s Unpacking liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 365s Selecting previously unselected package libmpfi0:armhf. 365s Preparing to unpack .../041-libmpfi0_1.5.4+ds-4_armhf.deb ... 365s Unpacking libmpfi0:armhf (1.5.4+ds-4) ... 365s Selecting previously unselected package libthai-data. 365s Preparing to unpack .../042-libthai-data_0.1.29-2build1_all.deb ... 365s Unpacking libthai-data (0.1.29-2build1) ... 365s Selecting previously unselected package libthai0:armhf. 365s Preparing to unpack .../043-libthai0_0.1.29-2build1_armhf.deb ... 365s Unpacking libthai0:armhf (0.1.29-2build1) ... 365s Selecting previously unselected package libpango-1.0-0:armhf. 365s Preparing to unpack .../044-libpango-1.0-0_1.56.2-1_armhf.deb ... 365s Unpacking libpango-1.0-0:armhf (1.56.2-1) ... 365s Selecting previously unselected package libpangoft2-1.0-0:armhf. 365s Preparing to unpack .../045-libpangoft2-1.0-0_1.56.2-1_armhf.deb ... 365s Unpacking libpangoft2-1.0-0:armhf (1.56.2-1) ... 365s Selecting previously unselected package libpangocairo-1.0-0:armhf. 365s Preparing to unpack .../046-libpangocairo-1.0-0_1.56.2-1_armhf.deb ... 365s Unpacking libpangocairo-1.0-0:armhf (1.56.2-1) ... 365s Selecting previously unselected package libpaper2:armhf. 365s Preparing to unpack .../047-libpaper2_2.2.5-0.3_armhf.deb ... 365s Unpacking libpaper2:armhf (2.2.5-0.3) ... 365s Selecting previously unselected package libpaper-utils. 365s Preparing to unpack .../048-libpaper-utils_2.2.5-0.3_armhf.deb ... 365s Unpacking libpaper-utils (2.2.5-0.3) ... 365s Selecting previously unselected package libpotrace0:armhf. 365s Preparing to unpack .../049-libpotrace0_1.16-2build1_armhf.deb ... 365s Unpacking libpotrace0:armhf (1.16-2build1) ... 365s Selecting previously unselected package libptexenc1:armhf. 365s Preparing to unpack .../050-libptexenc1_2024.20240313.70630+ds-5build2_armhf.deb ... 365s Unpacking libptexenc1:armhf (2024.20240313.70630+ds-5build2) ... 365s Selecting previously unselected package libsharpyuv0:armhf. 365s Preparing to unpack .../051-libsharpyuv0_1.5.0-0.1_armhf.deb ... 365s Unpacking libsharpyuv0:armhf (1.5.0-0.1) ... 365s Selecting previously unselected package libsm6:armhf. 365s Preparing to unpack .../052-libsm6_2%3a1.2.4-1_armhf.deb ... 365s Unpacking libsm6:armhf (2:1.2.4-1) ... 365s Selecting previously unselected package libsynctex2:armhf. 365s Preparing to unpack .../053-libsynctex2_2024.20240313.70630+ds-5build2_armhf.deb ... 365s Unpacking libsynctex2:armhf (2024.20240313.70630+ds-5build2) ... 365s Selecting previously unselected package libtcl8.6:armhf. 365s Preparing to unpack .../054-libtcl8.6_8.6.16+dfsg-1_armhf.deb ... 365s Unpacking libtcl8.6:armhf (8.6.16+dfsg-1) ... 365s Selecting previously unselected package libteckit0:armhf. 365s Preparing to unpack .../055-libteckit0_2.5.12+ds1-1_armhf.deb ... 365s Unpacking libteckit0:armhf (2.5.12+ds1-1) ... 365s Selecting previously unselected package libtexlua53-5:armhf. 365s Preparing to unpack .../056-libtexlua53-5_2024.20240313.70630+ds-5build2_armhf.deb ... 365s Unpacking libtexlua53-5:armhf (2024.20240313.70630+ds-5build2) ... 365s Selecting previously unselected package libjbig0:armhf. 365s Preparing to unpack .../057-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 365s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 365s Selecting previously unselected package libwebp7:armhf. 365s Preparing to unpack .../058-libwebp7_1.5.0-0.1_armhf.deb ... 365s Unpacking libwebp7:armhf (1.5.0-0.1) ... 365s Selecting previously unselected package libtiff6:armhf. 365s Preparing to unpack .../059-libtiff6_4.5.1+git230720-4ubuntu4_armhf.deb ... 365s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 365s Selecting previously unselected package libxft2:armhf. 365s Preparing to unpack .../060-libxft2_2.3.6-1build1_armhf.deb ... 365s Unpacking libxft2:armhf (2.3.6-1build1) ... 366s Selecting previously unselected package libxss1:armhf. 366s Preparing to unpack .../061-libxss1_1%3a1.2.3-1build3_armhf.deb ... 366s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 366s Selecting previously unselected package libtk8.6:armhf. 366s Preparing to unpack .../062-libtk8.6_8.6.16-1_armhf.deb ... 366s Unpacking libtk8.6:armhf (8.6.16-1) ... 366s Selecting previously unselected package libxt6t64:armhf. 366s Preparing to unpack .../063-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 366s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 366s Selecting previously unselected package libxmu6:armhf. 366s Preparing to unpack .../064-libxmu6_2%3a1.1.3-3build2_armhf.deb ... 366s Unpacking libxmu6:armhf (2:1.1.3-3build2) ... 366s Selecting previously unselected package libxpm4:armhf. 366s Preparing to unpack .../065-libxpm4_1%3a3.5.17-1build2_armhf.deb ... 366s Unpacking libxpm4:armhf (1:3.5.17-1build2) ... 366s Selecting previously unselected package libxaw7:armhf. 366s Preparing to unpack .../066-libxaw7_2%3a1.0.16-1_armhf.deb ... 366s Unpacking libxaw7:armhf (2:1.0.16-1) ... 366s Selecting previously unselected package libxi6:armhf. 366s Preparing to unpack .../067-libxi6_2%3a1.8.2-1_armhf.deb ... 366s Unpacking libxi6:armhf (2:1.8.2-1) ... 366s Selecting previously unselected package libzzip-0-13t64:armhf. 366s Preparing to unpack .../068-libzzip-0-13t64_0.13.78+dfsg.1-0.1_armhf.deb ... 366s Unpacking libzzip-0-13t64:armhf (0.13.78+dfsg.1-0.1) ... 366s Selecting previously unselected package zip. 366s Preparing to unpack .../069-zip_3.0-14ubuntu2_armhf.deb ... 366s Unpacking zip (3.0-14ubuntu2) ... 366s Selecting previously unselected package unzip. 366s Preparing to unpack .../070-unzip_6.0-28ubuntu6_armhf.deb ... 366s Unpacking unzip (6.0-28ubuntu6) ... 366s Selecting previously unselected package xdg-utils. 366s Preparing to unpack .../071-xdg-utils_1.2.1-2ubuntu1_all.deb ... 366s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 366s Selecting previously unselected package r-base-core. 366s Preparing to unpack .../072-r-base-core_4.4.3-1_armhf.deb ... 366s Unpacking r-base-core (4.4.3-1) ... 367s Selecting previously unselected package r-cran-littler. 367s Preparing to unpack .../073-r-cran-littler_0.3.20-2_armhf.deb ... 367s Unpacking r-cran-littler (0.3.20-2) ... 367s Selecting previously unselected package littler. 367s Preparing to unpack .../074-littler_0.3.20-2_all.deb ... 367s Unpacking littler (0.3.20-2) ... 367s Selecting previously unselected package r-cran-cli. 367s Preparing to unpack .../075-r-cran-cli_3.6.4-1_armhf.deb ... 367s Unpacking r-cran-cli (3.6.4-1) ... 367s Selecting previously unselected package r-cran-glue. 367s Preparing to unpack .../076-r-cran-glue_1.8.0-1_armhf.deb ... 367s Unpacking r-cran-glue (1.8.0-1) ... 367s Selecting previously unselected package r-cran-rlang. 367s Preparing to unpack .../077-r-cran-rlang_1.1.5-1_armhf.deb ... 367s Unpacking r-cran-rlang (1.1.5-1) ... 367s Selecting previously unselected package r-cran-lifecycle. 367s Preparing to unpack .../078-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 367s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 367s Selecting previously unselected package r-cran-gtable. 367s Preparing to unpack .../079-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 367s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 367s Selecting previously unselected package r-cran-isoband. 367s Preparing to unpack .../080-r-cran-isoband_0.2.7-1_armhf.deb ... 367s Unpacking r-cran-isoband (0.2.7-1) ... 367s Selecting previously unselected package r-cran-mass. 367s Preparing to unpack .../081-r-cran-mass_7.3-64-1_armhf.deb ... 367s Unpacking r-cran-mass (7.3-64-1) ... 367s Selecting previously unselected package r-cran-lattice. 367s Preparing to unpack .../082-r-cran-lattice_0.22-6-1_armhf.deb ... 367s Unpacking r-cran-lattice (0.22-6-1) ... 367s Selecting previously unselected package r-cran-nlme. 367s Preparing to unpack .../083-r-cran-nlme_3.1.167-1_armhf.deb ... 367s Unpacking r-cran-nlme (3.1.167-1) ... 367s Selecting previously unselected package r-cran-matrix. 367s Preparing to unpack .../084-r-cran-matrix_1.7-3-1_armhf.deb ... 367s Unpacking r-cran-matrix (1.7-3-1) ... 368s Selecting previously unselected package r-cran-mgcv. 368s Preparing to unpack .../085-r-cran-mgcv_1.9-1-1_armhf.deb ... 368s Unpacking r-cran-mgcv (1.9-1-1) ... 368s Selecting previously unselected package r-cran-farver. 368s Preparing to unpack .../086-r-cran-farver_2.1.2-1_armhf.deb ... 368s Unpacking r-cran-farver (2.1.2-1) ... 368s Selecting previously unselected package r-cran-labeling. 368s Preparing to unpack .../087-r-cran-labeling_0.4.3-1_all.deb ... 368s Unpacking r-cran-labeling (0.4.3-1) ... 368s Selecting previously unselected package r-cran-colorspace. 368s Preparing to unpack .../088-r-cran-colorspace_2.1-1+dfsg-1_armhf.deb ... 368s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 368s Selecting previously unselected package r-cran-munsell. 368s Preparing to unpack .../089-r-cran-munsell_0.5.1-1_all.deb ... 368s Unpacking r-cran-munsell (0.5.1-1) ... 368s Selecting previously unselected package r-cran-r6. 368s Preparing to unpack .../090-r-cran-r6_2.6.1-1_all.deb ... 368s Unpacking r-cran-r6 (2.6.1-1) ... 368s Selecting previously unselected package r-cran-rcolorbrewer. 368s Preparing to unpack .../091-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 368s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 368s Selecting previously unselected package r-cran-viridislite. 368s Preparing to unpack .../092-r-cran-viridislite_0.4.2-2_all.deb ... 368s Unpacking r-cran-viridislite (0.4.2-2) ... 368s Selecting previously unselected package r-cran-scales. 368s Preparing to unpack .../093-r-cran-scales_1.3.0-1_all.deb ... 368s Unpacking r-cran-scales (1.3.0-1) ... 368s Selecting previously unselected package r-cran-fansi. 368s Preparing to unpack .../094-r-cran-fansi_1.0.5-1_armhf.deb ... 368s Unpacking r-cran-fansi (1.0.5-1) ... 368s Selecting previously unselected package r-cran-magrittr. 368s Preparing to unpack .../095-r-cran-magrittr_2.0.3-1_armhf.deb ... 368s Unpacking r-cran-magrittr (2.0.3-1) ... 368s Selecting previously unselected package r-cran-utf8. 368s Preparing to unpack .../096-r-cran-utf8_1.2.4-1_armhf.deb ... 368s Unpacking r-cran-utf8 (1.2.4-1) ... 368s Selecting previously unselected package r-cran-vctrs. 368s Preparing to unpack .../097-r-cran-vctrs_0.6.5-1_armhf.deb ... 368s Unpacking r-cran-vctrs (0.6.5-1) ... 368s Selecting previously unselected package r-cran-pillar. 368s Preparing to unpack .../098-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 368s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 368s Selecting previously unselected package r-cran-pkgconfig. 368s Preparing to unpack .../099-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 368s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 368s Selecting previously unselected package r-cran-tibble. 368s Preparing to unpack .../100-r-cran-tibble_3.2.1+dfsg-3_armhf.deb ... 368s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 368s Selecting previously unselected package r-cran-withr. 368s Preparing to unpack .../101-r-cran-withr_3.0.2+dfsg-1_all.deb ... 368s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 368s Selecting previously unselected package r-cran-ggplot2. 369s Preparing to unpack .../102-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 369s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 369s Selecting previously unselected package r-cran-gridextra. 369s Preparing to unpack .../103-r-cran-gridextra_2.3-3build1_all.deb ... 369s Unpacking r-cran-gridextra (2.3-3build1) ... 369s Selecting previously unselected package r-cran-pkgkitten. 369s Preparing to unpack .../104-r-cran-pkgkitten_0.2.4-1_all.deb ... 369s Unpacking r-cran-pkgkitten (0.2.4-1) ... 369s Selecting previously unselected package r-cran-rcpp. 369s Preparing to unpack .../105-r-cran-rcpp_1.0.14-1_armhf.deb ... 369s Unpacking r-cran-rcpp (1.0.14-1) ... 369s Selecting previously unselected package r-cran-plyr. 369s Preparing to unpack .../106-r-cran-plyr_1.8.9-1_armhf.deb ... 369s Unpacking r-cran-plyr (1.8.9-1) ... 369s Selecting previously unselected package r-cran-reshape. 369s Preparing to unpack .../107-r-cran-reshape_0.8.9-1_all.deb ... 369s Unpacking r-cran-reshape (0.8.9-1) ... 369s Selecting previously unselected package tex-common. 369s Preparing to unpack .../108-tex-common_6.19_all.deb ... 369s Unpacking tex-common (6.19) ... 370s Selecting previously unselected package t1utils. 370s Preparing to unpack .../109-t1utils_1.41-4build3_armhf.deb ... 370s Unpacking t1utils (1.41-4build3) ... 370s Selecting previously unselected package texlive-binaries. 370s Preparing to unpack .../110-texlive-binaries_2024.20240313.70630+ds-5build2_armhf.deb ... 370s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 370s Selecting previously unselected package texlive-base. 370s Preparing to unpack .../111-texlive-base_2024.20250309-1_all.deb ... 370s Unpacking texlive-base (2024.20250309-1) ... 371s Selecting previously unselected package texlive-latex-base. 371s Preparing to unpack .../112-texlive-latex-base_2024.20250309-1_all.deb ... 371s Unpacking texlive-latex-base (2024.20250309-1) ... 372s Selecting previously unselected package nanook. 372s Preparing to unpack .../113-nanook_1.33+dfsg-6_all.deb ... 372s Unpacking nanook (1.33+dfsg-6) ... 372s Selecting previously unselected package nanook-examples. 372s Preparing to unpack .../114-nanook-examples_1.33+dfsg-6_all.deb ... 372s Unpacking nanook-examples (1.33+dfsg-6) ... 372s Setting up libgraphite2-3:armhf (1.3.14-2ubuntu1) ... 372s Setting up liblcms2-2:armhf (2.16-2) ... 372s Setting up libpixman-1-0:armhf (0.44.0-3) ... 372s Setting up libsharpyuv0:armhf (1.5.0-0.1) ... 372s Setting up nanook-examples (1.33+dfsg-6) ... 372s Setting up liblerc4:armhf (4.0.0+ds-5ubuntu1) ... 372s Setting up libxpm4:armhf (1:3.5.17-1build2) ... 372s Setting up libxi6:armhf (2:1.8.2-1) ... 372s Setting up java-common (0.76) ... 372s Setting up libxrender1:armhf (1:0.9.10-1.1build1) ... 372s Setting up libdatrie1:armhf (0.2.13-3build1) ... 372s Setting up libxcb-render0:armhf (1.17.0-2) ... 372s Setting up unzip (6.0-28ubuntu6) ... 372s Setting up x11-common (1:7.7+23ubuntu3) ... 372s Setting up libdeflate0:armhf (1.23-1) ... 372s Setting up libxcb-shm0:armhf (1.17.0-2) ... 372s Setting up libgomp1:armhf (15-20250222-0ubuntu1) ... 372s Setting up libjbig0:armhf (2.1-6.1ubuntu2) ... 372s Setting up libaec0:armhf (1.1.3-1) ... 372s Setting up last-align (1608-1) ... 372s Setting up tex-common (6.19) ... 373s update-language: texlive-base not installed and configured, doing nothing! 373s Setting up zip (3.0-14ubuntu2) ... 373s Setting up libblas3:armhf (3.12.1-2) ... 373s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 373s Setting up libzzip-0-13t64:armhf (0.13.78+dfsg.1-0.1) ... 373s Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... 373s Setting up libteckit0:armhf (2.5.12+ds1-1) ... 373s Setting up libapache-pom-java (33-2) ... 373s Setting up t1utils (1.41-4build3) ... 373s Setting up libtexlua53-5:armhf (2024.20240313.70630+ds-5build2) ... 373s Setting up fonts-dejavu-mono (2.37-8) ... 373s Setting up libtcl8.6:armhf (8.6.16+dfsg-1) ... 373s Setting up libmpfi0:armhf (1.5.4+ds-4) ... 373s Setting up fonts-dejavu-core (2.37-8) ... 373s Setting up libpcsclite1:armhf (2.3.1-1) ... 373s Setting up libjpeg-turbo8:armhf (2.1.5-3ubuntu2) ... 373s Setting up libkpathsea6:armhf (2024.20240313.70630+ds-5build2) ... 373s Setting up libgfortran5:armhf (15-20250222-0ubuntu1) ... 373s Setting up libwebp7:armhf (1.5.0-0.1) ... 373s Setting up fonts-lmodern (2.005-1) ... 373s Setting up libharfbuzz0b:armhf (10.2.0-1) ... 373s Setting up libthai-data (0.1.29-2build1) ... 373s Setting up libxss1:armhf (1:1.2.3-1build3) ... 373s Setting up libpaper2:armhf (2.2.5-0.3) ... 373s Setting up ca-certificates-java (20240118) ... 373s No JRE found. Skipping Java certificates setup. 373s Setting up xdg-utils (1.2.1-2ubuntu1) ... 373s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 373s Setting up libsz2:armhf (1.1.3-1) ... 373s Setting up libsynctex2:armhf (2024.20240313.70630+ds-5build2) ... 373s Setting up libpotrace0:armhf (1.16-2build1) ... 373s Setting up libjpeg8:armhf (8c-2ubuntu11) ... 373s Setting up libice6:armhf (2:1.1.1-1) ... 373s Setting up liblapack3:armhf (3.12.1-2) ... 373s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 373s Setting up openjdk-21-jre-headless:armhf (21.0.6+7-1) ... 373s update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode 373s update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 373s update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 373s update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 373s update-alternatives: using /usr/lib/jvm/java-21-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 373s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 373s Setting up libcommons-parent-java (56-1) ... 373s Setting up libpaper-utils (2.2.5-0.3) ... 373s Setting up libthai0:armhf (0.1.29-2build1) ... 373s Setting up libptexenc1:armhf (2024.20240313.70630+ds-5build2) ... 373s Setting up libhdf5-310:armhf (1.14.5+repack-3) ... 373s Setting up libtiff6:armhf (4.5.1+git230720-4ubuntu4) ... 373s Setting up libfontconfig1:armhf (2.15.0-2ubuntu1) ... 373s Setting up libsm6:armhf (2:1.2.4-1) ... 373s Setting up libhdf5-hl-310:armhf (1.14.5+repack-3) ... 373s Setting up fontconfig (2.15.0-2ubuntu1) ... 375s Regenerating fonts cache... done. 375s Setting up libxft2:armhf (2.3.6-1build1) ... 375s Setting up libcommons-io-java (2.18.0-1) ... 375s Setting up libtk8.6:armhf (8.6.16-1) ... 375s Setting up libpango-1.0-0:armhf (1.56.2-1) ... 375s Setting up libcairo2:armhf (1.18.2-2) ... 375s Setting up hdf5-tools (1.14.5+repack-3) ... 375s Setting up libxt6t64:armhf (1:1.2.1-1.2build1) ... 375s Setting up libpangoft2-1.0-0:armhf (1.56.2-1) ... 375s Setting up libpangocairo-1.0-0:armhf (1.56.2-1) ... 375s Setting up libxmu6:armhf (2:1.1.3-3build2) ... 375s Setting up libxaw7:armhf (2:1.0.16-1) ... 375s Setting up r-base-core (4.4.3-1) ... 376s Creating config file /etc/R/Renviron with new version 376s Setting up r-cran-labeling (0.4.3-1) ... 376s Setting up r-cran-lattice (0.22-6-1) ... 376s Setting up r-cran-nlme (3.1.167-1) ... 376s Setting up r-cran-farver (2.1.2-1) ... 376s Setting up r-cran-viridislite (0.4.2-2) ... 376s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ... 376s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 376s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 376s Setting up r-cran-r6 (2.6.1-1) ... 376s Setting up r-cran-pkgkitten (0.2.4-1) ... 376s Setting up texlive-base (2024.20250309-1) ... 377s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 377s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 378s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 378s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 379s Setting up r-cran-magrittr (2.0.3-1) ... 379s Setting up r-cran-littler (0.3.20-2) ... 379s Setting up r-cran-rcpp (1.0.14-1) ... 379s Setting up r-cran-rlang (1.1.5-1) ... 379s Setting up littler (0.3.20-2) ... 379s Setting up r-cran-withr (3.0.2+dfsg-1) ... 379s Setting up r-cran-fansi (1.0.5-1) ... 379s Setting up r-cran-mass (7.3-64-1) ... 379s Setting up r-cran-glue (1.8.0-1) ... 379s Setting up r-cran-cli (3.6.4-1) ... 379s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 379s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 379s Setting up r-cran-utf8 (1.2.4-1) ... 379s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 379s Setting up texlive-latex-base (2024.20250309-1) ... 379s Setting up r-cran-plyr (1.8.9-1) ... 379s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 379s Setting up r-cran-isoband (0.2.7-1) ... 379s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 379s Setting up r-cran-matrix (1.7-3-1) ... 379s Setting up r-cran-mgcv (1.9-1-1) ... 379s Setting up r-cran-vctrs (0.6.5-1) ... 379s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 379s Setting up r-cran-reshape (0.8.9-1) ... 379s Setting up r-cran-munsell (0.5.1-1) ... 379s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 379s Setting up r-cran-gridextra (2.3-3build1) ... 379s Setting up r-cran-scales (1.3.0-1) ... 379s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 379s Processing triggers for libc-bin (2.41-1ubuntu1) ... 379s Processing triggers for man-db (2.13.0-1) ... 380s Processing triggers for install-info (7.1.1-1) ... 380s Processing triggers for ca-certificates-java (20240118) ... 381s Adding debian:ACCVRAIZ1.pem 381s Adding debian:AC_RAIZ_FNMT-RCM.pem 381s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 381s Adding debian:ANF_Secure_Server_Root_CA.pem 381s Adding debian:Actalis_Authentication_Root_CA.pem 381s Adding debian:AffirmTrust_Commercial.pem 381s Adding debian:AffirmTrust_Networking.pem 381s Adding debian:AffirmTrust_Premium.pem 381s Adding debian:AffirmTrust_Premium_ECC.pem 381s Adding debian:Amazon_Root_CA_1.pem 381s Adding debian:Amazon_Root_CA_2.pem 381s Adding debian:Amazon_Root_CA_3.pem 381s Adding debian:Amazon_Root_CA_4.pem 381s Adding debian:Atos_TrustedRoot_2011.pem 381s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 381s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 381s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 381s Adding debian:BJCA_Global_Root_CA1.pem 381s Adding debian:BJCA_Global_Root_CA2.pem 381s Adding debian:Baltimore_CyberTrust_Root.pem 381s Adding debian:Buypass_Class_2_Root_CA.pem 381s Adding debian:Buypass_Class_3_Root_CA.pem 381s Adding debian:CA_Disig_Root_R2.pem 381s Adding debian:CFCA_EV_ROOT.pem 381s Adding debian:COMODO_Certification_Authority.pem 381s Adding debian:COMODO_ECC_Certification_Authority.pem 381s Adding debian:COMODO_RSA_Certification_Authority.pem 381s Adding debian:Certainly_Root_E1.pem 381s Adding debian:Certainly_Root_R1.pem 381s Adding debian:Certigna.pem 381s Adding debian:Certigna_Root_CA.pem 381s Adding debian:Certum_EC-384_CA.pem 381s Adding debian:Certum_Trusted_Network_CA.pem 381s Adding debian:Certum_Trusted_Network_CA_2.pem 381s Adding debian:Certum_Trusted_Root_CA.pem 381s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 381s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 381s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 381s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 381s Adding debian:Comodo_AAA_Services_root.pem 381s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 381s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 381s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 381s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 381s Adding debian:DigiCert_Assured_ID_Root_CA.pem 381s Adding debian:DigiCert_Assured_ID_Root_G2.pem 381s Adding debian:DigiCert_Assured_ID_Root_G3.pem 381s Adding debian:DigiCert_Global_Root_CA.pem 381s Adding debian:DigiCert_Global_Root_G2.pem 381s Adding debian:DigiCert_Global_Root_G3.pem 381s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 381s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 381s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 381s Adding debian:DigiCert_Trusted_Root_G4.pem 381s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 381s Adding debian:Entrust_Root_Certification_Authority.pem 381s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 381s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 382s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 382s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem 382s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 382s Adding debian:GLOBALTRUST_2020.pem 382s Adding debian:GTS_Root_R1.pem 382s Adding debian:GTS_Root_R2.pem 382s Adding debian:GTS_Root_R3.pem 382s Adding debian:GTS_Root_R4.pem 382s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 382s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 382s Adding debian:GlobalSign_Root_CA.pem 382s Adding debian:GlobalSign_Root_CA_-_R3.pem 382s Adding debian:GlobalSign_Root_CA_-_R6.pem 382s Adding debian:GlobalSign_Root_E46.pem 382s Adding debian:GlobalSign_Root_R46.pem 382s Adding debian:Go_Daddy_Class_2_CA.pem 382s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 382s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 382s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 382s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 382s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 382s Adding debian:HiPKI_Root_CA_-_G1.pem 382s Adding debian:Hongkong_Post_Root_CA_3.pem 382s Adding debian:ISRG_Root_X1.pem 382s Adding debian:ISRG_Root_X2.pem 382s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 382s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 382s Adding debian:Izenpe.com.pem 382s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 382s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 382s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 382s Adding debian:NAVER_Global_Root_Certification_Authority.pem 382s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 382s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 382s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 382s Adding debian:QuoVadis_Root_CA_1_G3.pem 382s Adding debian:QuoVadis_Root_CA_2.pem 382s Adding debian:QuoVadis_Root_CA_2_G3.pem 382s Adding debian:QuoVadis_Root_CA_3.pem 382s Adding debian:QuoVadis_Root_CA_3_G3.pem 382s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 382s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 382s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 382s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 382s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 382s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 382s Adding debian:SZAFIR_ROOT_CA2.pem 382s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 382s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 382s Adding debian:SecureSign_RootCA11.pem 382s Adding debian:SecureSign_Root_CA12.pem 382s Adding debian:SecureSign_Root_CA14.pem 382s Adding debian:SecureSign_Root_CA15.pem 382s Adding debian:SecureTrust_CA.pem 382s Adding debian:Secure_Global_CA.pem 382s Adding debian:Security_Communication_ECC_RootCA1.pem 382s Adding debian:Security_Communication_RootCA2.pem 382s Adding debian:Security_Communication_RootCA3.pem 382s Adding debian:Starfield_Class_2_CA.pem 382s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 382s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 382s Adding debian:SwissSign_Gold_CA_-_G2.pem 382s Adding debian:SwissSign_Silver_CA_-_G2.pem 382s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 382s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 382s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 382s Adding debian:TWCA_CYBER_Root_CA.pem 382s Adding debian:TWCA_Global_Root_CA.pem 382s Adding debian:TWCA_Root_Certification_Authority.pem 382s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem 382s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem 382s Adding debian:TeliaSonera_Root_CA_v1.pem 382s Adding debian:Telia_Root_CA_v2.pem 382s Adding debian:TrustAsia_Global_Root_CA_G3.pem 382s Adding debian:TrustAsia_Global_Root_CA_G4.pem 382s Adding debian:Trustwave_Global_Certification_Authority.pem 382s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 382s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 382s Adding debian:TunTrust_Root_CA.pem 382s Adding debian:UCA_Extended_Validation_Root.pem 382s Adding debian:UCA_Global_G2_Root.pem 382s Adding debian:USERTrust_ECC_Certification_Authority.pem 382s Adding debian:USERTrust_RSA_Certification_Authority.pem 382s Adding debian:XRamp_Global_CA_Root.pem 382s Adding debian:certSIGN_ROOT_CA.pem 382s Adding debian:certSIGN_Root_CA_G2.pem 382s Adding debian:e-Szigno_Root_CA_2017.pem 382s Adding debian:ePKI_Root_Certification_Authority.pem 382s Adding debian:emSign_ECC_Root_CA_-_C3.pem 382s Adding debian:emSign_ECC_Root_CA_-_G3.pem 382s Adding debian:emSign_Root_CA_-_C1.pem 382s Adding debian:emSign_Root_CA_-_G1.pem 382s Adding debian:vTrus_ECC_Root_CA.pem 382s Adding debian:vTrus_Root_CA.pem 382s done. 382s Setting up default-jre-headless (2:1.21-76) ... 382s Setting up nanook (1.33+dfsg-6) ... 382s Processing triggers for tex-common (6.19) ... 382s Running updmap-sys. This may take some time... done. 383s Running mktexlsr /var/lib/texmf ... done. 383s Building format(s) --all. 461s This may take some time... done. 470s autopkgtest [16:20:50]: test run-unit-test: [----------------------- 485s 485s NanoOK v1.33 485s 485s Comments/bugs to: richard.leggett@earlham.ac.uk 485s Follow NanoOK on twitter: @NanoOK_Software 485s 485s Scripts dir: /usr/share/nanook/bin 485s 485s Checking dependencies 486s *** ERROR: Couldn't find Rscript - is R installed? *** 486s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 486s h5dump: Version 1.14.5 486s 486s Making directory /tmp/autopkgtest.XXywBx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/fasta 486s Checking FAST5 directory structure... 486s Using pass/fail dirs: yes 486s Using batch dirs: no 486s Using barcodes: no 486s 489s Processing [ ] 0/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 Processing [==================================================] 1/1 489s 489s DONE 489s 489s NanoOK v1.33 489s 489s Comments/bugs to: richard.leggett@earlham.ac.uk 489s Follow NanoOK on twitter: @NanoOK_Software 489s 489s Scripts dir: /usr/share/nanook/bin 489s 489s Checking dependencies 489s *** ERROR: Couldn't find Rscript - is R installed? *** 489s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 489s h5dump: Version 1.14.5 489s 489s Making directory /tmp/autopkgtest.XXywBx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/last 489s Making directory /tmp/autopkgtest.XXywBx/autopkgtest_tmp/data/nanook_ecoli_500/N79596_dh10b_8kb_11022015/logs/last 489s Checking FASTA/Q directory structure... 489s Using pass/fail dirs: yes 489s Using batch dirs: no 489s Using barcodes: no 489s 492s Processing [ ] 0/3 Processing [================ ] 1/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 Processing [==================================================] 3/3 492s 492s DONE 492s 492s NanoOK v1.33 492s 492s Comments/bugs to: richard.leggett@earlham.ac.uk 492s Follow NanoOK on twitter: @NanoOK_Software 492s 492s Scripts dir: /usr/share/nanook/bin 492s 492s Checking dependencies 492s *** ERROR: Couldn't find Rscript - is R installed? *** 492s pdfTeX 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) 492s h5dump: Version 1.14.5 492s 492s Checking FASTA/Q directory structure... 492s Using pass/fail dirs: yes 492s Using batch dirs: no 492s Using barcodes: no 492s 492s Using .sizes file ecoli_dh10b_cs.fasta.sizes 492s Note: if you have changed the reference file, you need to delete the .sizes file and re-run. 492s 492s Reading reference sizes and making directories 492s Escherichia_coli 4686137 492s Control_sequence 3560 492s 492s Calculating reference GC 492s Escherichia_coli 494s Control_sequence 494s 494s Parsing Template 494s [ ] 0/1 [==================================================] 1/1 494s 494s Error: unable to find any Template alignments to process. 494s Common reasons for this: 494s 1. Failure to index the reference with the alignment tool, resulting in alignment files of 0 bytes 494s 2. Wrong reference specified to the align stage, resulting in no alignments 494s 3. When indexing with LAST, the output prefix needs to be the same as the reference FASTA file, minus the .fasta extension 494s e.g. lastdb -Q 0 referencename referencename.fasta 494s 494s autopkgtest [16:21:14]: test run-unit-test: -----------------------] 498s autopkgtest [16:21:18]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 498s run-unit-test FAIL non-zero exit status 1 502s autopkgtest [16:21:22]: @@@@@@@@@@@@@@@@@@@@ summary 502s run-unit-test FAIL non-zero exit status 1